BLASTX nr result

ID: Zingiber23_contig00041691 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00041691
         (611 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006850760.1| hypothetical protein AMTR_s00025p00077440 [A...    59   1e-06
ref|XP_006849991.1| hypothetical protein AMTR_s00022p00165560 [A...    58   2e-06

>ref|XP_006850760.1| hypothetical protein AMTR_s00025p00077440 [Amborella trichopoda]
           gi|548854431|gb|ERN12341.1| hypothetical protein
           AMTR_s00025p00077440 [Amborella trichopoda]
          Length = 212

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 26/61 (42%), Positives = 33/61 (54%)
 Frame = -1

Query: 434 QHPRKLYSCKYCNKMLSTPQGLGGHQNAHKTERQQAKVAPNRKPEPSECFVLVPLEPPGG 255
           ++P   Y C YC ++ S  Q LGGHQNAHK ER   K A   KP  S+C   +   PP  
Sbjct: 60  RNPGNQYPCAYCPRLFSNSQALGGHQNAHKKERMATKKALKSKPNASQCLQNIVPAPPSS 119

Query: 254 S 252
           +
Sbjct: 120 T 120


>ref|XP_006849991.1| hypothetical protein AMTR_s00022p00165560 [Amborella trichopoda]
           gi|548853589|gb|ERN11572.1| hypothetical protein
           AMTR_s00022p00165560 [Amborella trichopoda]
          Length = 217

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 27/60 (45%), Positives = 34/60 (56%)
 Frame = -1

Query: 431 HPRKLYSCKYCNKMLSTPQGLGGHQNAHKTERQQAKVAPNRKPEPSECFVLVPLEPPGGS 252
           H  K YSC YC ++ ST Q LGGHQNAHK+ER  A+ A       ++ F  +   PP  S
Sbjct: 73  HQAKQYSCAYCGRVFSTSQALGGHQNAHKSERIAARKAVRNSVNAAQGFQRIAPMPPNSS 132


Top