BLASTX nr result
ID: Zingiber23_contig00041679
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00041679
(237 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004981392.1| PREDICTED: pentatricopeptide repeat-containi... 108 6e-22
ref|XP_003573921.1| PREDICTED: pentatricopeptide repeat-containi... 108 1e-21
gb|EAY92795.1| hypothetical protein OsI_14599 [Oryza sativa Indi... 107 2e-21
emb|CAH67783.1| H0201G08.10 [Oryza sativa Indica Group] 107 2e-21
ref|NP_001052029.1| Os04g0110500 [Oryza sativa Japonica Group] g... 107 2e-21
ref|XP_002466267.1| hypothetical protein SORBIDRAFT_01g004770 [S... 106 3e-21
tpg|DAA51987.1| TPA: hypothetical protein ZEAMMB73_709752 [Zea m... 105 6e-21
ref|NP_001170755.1| uncharacterized protein LOC100384848 [Zea ma... 105 6e-21
emb|CBI17926.3| unnamed protein product [Vitis vinifera] 105 6e-21
ref|XP_006653103.1| PREDICTED: pentatricopeptide repeat-containi... 105 8e-21
gb|EMS51146.1| hypothetical protein TRIUR3_09018 [Triticum urartu] 105 8e-21
emb|CAN60259.1| hypothetical protein VITISV_007741 [Vitis vinifera] 102 4e-20
ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containi... 98 1e-18
gb|ESW07278.1| hypothetical protein PHAVU_010G116300g [Phaseolus... 97 2e-18
ref|XP_003627527.1| Pentatricopeptide repeat-containing protein ... 96 5e-18
ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containi... 94 1e-17
emb|CAN66974.1| hypothetical protein VITISV_022076 [Vitis vinifera] 94 1e-17
ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containi... 94 2e-17
ref|XP_004142577.1| PREDICTED: pentatricopeptide repeat-containi... 94 2e-17
ref|XP_002324255.1| pentatricopeptide repeat-containing family p... 93 3e-17
>ref|XP_004981392.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Setaria italica]
Length = 457
Score = 108 bits (271), Expect = 6e-22
Identities = 49/79 (62%), Positives = 61/79 (77%)
Frame = +1
Query: 1 GRLREAYDTILKMPMKPNTVLWGILLSTCKVHNNVDLAEIAAMNLIELDPDDPWARVMLS 180
GRL+EAY+ I MPMKPN V+WG L+ CKVH+NV+L EIAA + LDP+DPWARVMLS
Sbjct: 333 GRLQEAYNMIRTMPMKPNAVIWGAFLNACKVHSNVELGEIAAAEVSRLDPNDPWARVMLS 392
Query: 181 NIYAEIGDWGGVMRLRKEM 237
++YA+ DW + R RKEM
Sbjct: 393 SMYAKAQDWSSLARERKEM 411
>ref|XP_003573921.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 531
Score = 108 bits (269), Expect = 1e-21
Identities = 49/79 (62%), Positives = 60/79 (75%)
Frame = +1
Query: 1 GRLREAYDTILKMPMKPNTVLWGILLSTCKVHNNVDLAEIAAMNLIELDPDDPWARVMLS 180
GRL EAY I MPMKPN V+WG LS CKVH++V+L EIAA + LDPDDPWARVM+S
Sbjct: 403 GRLPEAYRMIQTMPMKPNMVIWGAFLSACKVHSSVELGEIAAAEVTRLDPDDPWARVMMS 462
Query: 181 NIYAEIGDWGGVMRLRKEM 237
++YA+ DW G+ R R+EM
Sbjct: 463 SMYAKAQDWSGLARERREM 481
>gb|EAY92795.1| hypothetical protein OsI_14599 [Oryza sativa Indica Group]
Length = 530
Score = 107 bits (267), Expect = 2e-21
Identities = 49/79 (62%), Positives = 59/79 (74%)
Frame = +1
Query: 1 GRLREAYDTILKMPMKPNTVLWGILLSTCKVHNNVDLAEIAAMNLIELDPDDPWARVMLS 180
GRL+EAY I MPM PNTV+WG LS CKVH N++L +IAA L LDPDDPW RVMLS
Sbjct: 402 GRLQEAYSMIRTMPMDPNTVIWGAFLSACKVHGNMELGKIAAEELTRLDPDDPWGRVMLS 461
Query: 181 NIYAEIGDWGGVMRLRKEM 237
++YA+ DW G+ R R+EM
Sbjct: 462 SMYAKAQDWIGLARERREM 480
>emb|CAH67783.1| H0201G08.10 [Oryza sativa Indica Group]
Length = 530
Score = 107 bits (267), Expect = 2e-21
Identities = 49/79 (62%), Positives = 59/79 (74%)
Frame = +1
Query: 1 GRLREAYDTILKMPMKPNTVLWGILLSTCKVHNNVDLAEIAAMNLIELDPDDPWARVMLS 180
GRL+EAY I MPM PNTV+WG LS CKVH N++L +IAA L LDPDDPW RVMLS
Sbjct: 402 GRLQEAYSMIRTMPMDPNTVIWGAFLSACKVHGNMELGKIAAEELTRLDPDDPWGRVMLS 461
Query: 181 NIYAEIGDWGGVMRLRKEM 237
++YA+ DW G+ R R+EM
Sbjct: 462 SMYAKAQDWIGLARERREM 480
>ref|NP_001052029.1| Os04g0110500 [Oryza sativa Japonica Group]
gi|38345581|emb|CAE01779.2| OSJNBa0027H06.17 [Oryza
sativa Japonica Group] gi|113563600|dbj|BAF13943.1|
Os04g0110500 [Oryza sativa Japonica Group]
gi|125589117|gb|EAZ29467.1| hypothetical protein
OsJ_13541 [Oryza sativa Japonica Group]
gi|215736988|dbj|BAG95917.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 531
Score = 107 bits (267), Expect = 2e-21
Identities = 49/79 (62%), Positives = 59/79 (74%)
Frame = +1
Query: 1 GRLREAYDTILKMPMKPNTVLWGILLSTCKVHNNVDLAEIAAMNLIELDPDDPWARVMLS 180
GRL+EAY I MPM PNTV+WG LS CKVH N++L +IAA L LDPDDPW RVMLS
Sbjct: 403 GRLQEAYSMIRTMPMDPNTVIWGAFLSACKVHGNMELGKIAAEELTRLDPDDPWGRVMLS 462
Query: 181 NIYAEIGDWGGVMRLRKEM 237
++YA+ DW G+ R R+EM
Sbjct: 463 SMYAKAQDWIGLARERREM 481
>ref|XP_002466267.1| hypothetical protein SORBIDRAFT_01g004770 [Sorghum bicolor]
gi|241920121|gb|EER93265.1| hypothetical protein
SORBIDRAFT_01g004770 [Sorghum bicolor]
Length = 537
Score = 106 bits (265), Expect = 3e-21
Identities = 48/79 (60%), Positives = 59/79 (74%)
Frame = +1
Query: 1 GRLREAYDTILKMPMKPNTVLWGILLSTCKVHNNVDLAEIAAMNLIELDPDDPWARVMLS 180
GRL+EAY I M MKPN V+WG L+ CKVH+NV+L EIAA L LDPDDPWA+VMLS
Sbjct: 409 GRLQEAYSIIRTMRMKPNAVIWGAFLNACKVHSNVELGEIAAAELTRLDPDDPWAKVMLS 468
Query: 181 NIYAEIGDWGGVMRLRKEM 237
++YA+ DW + R R+EM
Sbjct: 469 SLYAKAQDWSSLARERREM 487
>tpg|DAA51987.1| TPA: hypothetical protein ZEAMMB73_709752 [Zea mays]
Length = 536
Score = 105 bits (262), Expect = 6e-21
Identities = 47/79 (59%), Positives = 60/79 (75%)
Frame = +1
Query: 1 GRLREAYDTILKMPMKPNTVLWGILLSTCKVHNNVDLAEIAAMNLIELDPDDPWARVMLS 180
GRL+EAY+ I M MKPN V+WG L+ CKVH+NV+L EIAA L LDP DPWA+VMLS
Sbjct: 408 GRLQEAYNIIRTMRMKPNAVIWGAFLNACKVHSNVELGEIAAAELTRLDPGDPWAKVMLS 467
Query: 181 NIYAEIGDWGGVMRLRKEM 237
++YA++ DW + R R+EM
Sbjct: 468 SLYAKLQDWNSLARERREM 486
>ref|NP_001170755.1| uncharacterized protein LOC100384848 [Zea mays]
gi|238007354|gb|ACR34712.1| unknown [Zea mays]
Length = 464
Score = 105 bits (262), Expect = 6e-21
Identities = 47/79 (59%), Positives = 60/79 (75%)
Frame = +1
Query: 1 GRLREAYDTILKMPMKPNTVLWGILLSTCKVHNNVDLAEIAAMNLIELDPDDPWARVMLS 180
GRL+EAY+ I M MKPN V+WG L+ CKVH+NV+L EIAA L LDP DPWA+VMLS
Sbjct: 336 GRLQEAYNIIRTMRMKPNAVIWGAFLNACKVHSNVELGEIAAAELTRLDPGDPWAKVMLS 395
Query: 181 NIYAEIGDWGGVMRLRKEM 237
++YA++ DW + R R+EM
Sbjct: 396 SLYAKLQDWNSLARERREM 414
>emb|CBI17926.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 105 bits (262), Expect = 6e-21
Identities = 48/79 (60%), Positives = 59/79 (74%)
Frame = +1
Query: 1 GRLREAYDTILKMPMKPNTVLWGILLSTCKVHNNVDLAEIAAMNLIELDPDDPWARVMLS 180
G L+EAYD I+ MPM+ N ++WG LS C+VHNNV+L E+AA L+ LDP DPWARVMLS
Sbjct: 475 GCLKEAYDLIMGMPMEANEIIWGAFLSACRVHNNVELGEVAARRLLGLDPRDPWARVMLS 534
Query: 181 NIYAEIGDWGGVMRLRKEM 237
N+YAE W M LRKE+
Sbjct: 535 NMYAEEAKWDRSMGLRKEI 553
>ref|XP_006653103.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Oryza brachyantha]
Length = 527
Score = 105 bits (261), Expect = 8e-21
Identities = 47/79 (59%), Positives = 58/79 (73%)
Frame = +1
Query: 1 GRLREAYDTILKMPMKPNTVLWGILLSTCKVHNNVDLAEIAAMNLIELDPDDPWARVMLS 180
GRL+EAY I MPM PNTV+WG LS CKVH N++L +IAA + LDPDDPW RVMLS
Sbjct: 399 GRLQEAYSMIRTMPMDPNTVIWGAFLSACKVHGNLELGKIAAEEITRLDPDDPWGRVMLS 458
Query: 181 NIYAEIGDWGGVMRLRKEM 237
++YA+ DW + R R+EM
Sbjct: 459 SMYAKAQDWTALARERREM 477
>gb|EMS51146.1| hypothetical protein TRIUR3_09018 [Triticum urartu]
Length = 424
Score = 105 bits (261), Expect = 8e-21
Identities = 47/79 (59%), Positives = 59/79 (74%)
Frame = +1
Query: 1 GRLREAYDTILKMPMKPNTVLWGILLSTCKVHNNVDLAEIAAMNLIELDPDDPWARVMLS 180
GRL EAY I MPMKPN V+WG LS CKVH +++L EIAA + LDPDDPWARVM+S
Sbjct: 296 GRLAEAYRMIKTMPMKPNMVIWGAFLSACKVHGSLELGEIAAAEVTRLDPDDPWARVMMS 355
Query: 181 NIYAEIGDWGGVMRLRKEM 237
++YA+ +W G+ R R+EM
Sbjct: 356 SMYAKAQNWSGLARERREM 374
>emb|CAN60259.1| hypothetical protein VITISV_007741 [Vitis vinifera]
Length = 602
Score = 102 bits (255), Expect = 4e-20
Identities = 47/79 (59%), Positives = 58/79 (73%)
Frame = +1
Query: 1 GRLREAYDTILKMPMKPNTVLWGILLSTCKVHNNVDLAEIAAMNLIELDPDDPWARVMLS 180
G L+EAYD I+ MPM+ N ++WG LS C+VHNNV+L E+AA L+ L P DPWARVMLS
Sbjct: 475 GCLKEAYDLIMGMPMEANEIIWGAFLSACRVHNNVELGEVAARRLLGLXPRDPWARVMLS 534
Query: 181 NIYAEIGDWGGVMRLRKEM 237
N+YAE W M LRKE+
Sbjct: 535 NMYAEEAKWDRSMGLRKEI 553
>ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Glycine max]
Length = 512
Score = 98.2 bits (243), Expect = 1e-18
Identities = 46/79 (58%), Positives = 59/79 (74%)
Frame = +1
Query: 1 GRLREAYDTILKMPMKPNTVLWGILLSTCKVHNNVDLAEIAAMNLIELDPDDPWARVMLS 180
G+LREAY+ I +MPMKP++V+WG LL C H+NV+LAEIAA +L L+P +P V+LS
Sbjct: 368 GQLREAYEVIQRMPMKPDSVIWGALLGACSFHDNVELAEIAAESLFALEPWNPGNYVILS 427
Query: 181 NIYAEIGDWGGVMRLRKEM 237
NIYA G W GV +LRK M
Sbjct: 428 NIYASAGQWDGVAKLRKVM 446
>gb|ESW07278.1| hypothetical protein PHAVU_010G116300g [Phaseolus vulgaris]
Length = 510
Score = 97.4 bits (241), Expect = 2e-18
Identities = 45/79 (56%), Positives = 57/79 (72%)
Frame = +1
Query: 1 GRLREAYDTILKMPMKPNTVLWGILLSTCKVHNNVDLAEIAAMNLIELDPDDPWARVMLS 180
G LREAY+ I MPMKP++V+WG LL C H NV+LAE+AA +L L+P +P V+LS
Sbjct: 368 GHLREAYEVIQSMPMKPDSVIWGALLGACSFHGNVELAEVAAESLFVLEPWNPGNYVILS 427
Query: 181 NIYAEIGDWGGVMRLRKEM 237
NIYA +G W GV +LRK M
Sbjct: 428 NIYASVGQWDGVAKLRKVM 446
>ref|XP_003627527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355521549|gb|AET02003.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 550
Score = 95.9 bits (237), Expect = 5e-18
Identities = 45/79 (56%), Positives = 57/79 (72%)
Frame = +1
Query: 1 GRLREAYDTILKMPMKPNTVLWGILLSTCKVHNNVDLAEIAAMNLIELDPDDPWARVMLS 180
GRL EAY+ I +MPMKP++V+WG LL C H NV+LAE+AA +L L+P +P V+LS
Sbjct: 408 GRLTEAYEVIKRMPMKPDSVIWGTLLGACSFHGNVELAEVAAESLFVLEPWNPGNYVILS 467
Query: 181 NIYAEIGDWGGVMRLRKEM 237
NIYA G W GV +LRK M
Sbjct: 468 NIYASAGKWDGVAKLRKVM 486
>ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Vitis vinifera]
Length = 512
Score = 94.4 bits (233), Expect = 1e-17
Identities = 46/79 (58%), Positives = 57/79 (72%)
Frame = +1
Query: 1 GRLREAYDTILKMPMKPNTVLWGILLSTCKVHNNVDLAEIAAMNLIELDPDDPWARVMLS 180
G LREA+D IL+MPM+P++V+WG LL C H +V+LAE AA L EL+P +P V+LS
Sbjct: 367 GELREAHDLILRMPMEPDSVVWGTLLGACSFHGHVELAEKAAGALFELEPSNPGNYVILS 426
Query: 181 NIYAEIGDWGGVMRLRKEM 237
NIYA G W GV RLRK M
Sbjct: 427 NIYATAGRWDGVARLRKLM 445
>emb|CAN66974.1| hypothetical protein VITISV_022076 [Vitis vinifera]
Length = 967
Score = 94.4 bits (233), Expect = 1e-17
Identities = 46/79 (58%), Positives = 57/79 (72%)
Frame = +1
Query: 1 GRLREAYDTILKMPMKPNTVLWGILLSTCKVHNNVDLAEIAAMNLIELDPDDPWARVMLS 180
G LREA+D IL+MPM+P++V+WG LL C H +V+LAE AA L EL+P +P V+LS
Sbjct: 822 GELREAHDLILRMPMEPDSVVWGTLLGACSFHGHVELAEKAAGALFELEPSNPGNYVILS 881
Query: 181 NIYAEIGDWGGVMRLRKEM 237
NIYA G W GV RLRK M
Sbjct: 882 NIYATAGRWDGVARLRKLM 900
>ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 512
Score = 93.6 bits (231), Expect = 2e-17
Identities = 44/79 (55%), Positives = 56/79 (70%)
Frame = +1
Query: 1 GRLREAYDTILKMPMKPNTVLWGILLSTCKVHNNVDLAEIAAMNLIELDPDDPWARVMLS 180
G L+EAY+ I MPM P++V+WG LL C H NV+L E+AA +L +L+P +P V+LS
Sbjct: 367 GELQEAYNLIQNMPMAPDSVIWGTLLGACSFHGNVELGEVAAESLFKLEPWNPGNYVILS 426
Query: 181 NIYAEIGDWGGVMRLRKEM 237
NIYA GDW GV RLRK M
Sbjct: 427 NIYALAGDWSGVARLRKMM 445
>ref|XP_004142577.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 589
Score = 93.6 bits (231), Expect = 2e-17
Identities = 44/79 (55%), Positives = 56/79 (70%)
Frame = +1
Query: 1 GRLREAYDTILKMPMKPNTVLWGILLSTCKVHNNVDLAEIAAMNLIELDPDDPWARVMLS 180
G L+EAY+ I MPM P++V+WG LL C H NV+L E+AA +L +L+P +P V+LS
Sbjct: 367 GELQEAYNLIQNMPMAPDSVIWGTLLGACSFHGNVELGEVAAESLFKLEPWNPGNYVILS 426
Query: 181 NIYAEIGDWGGVMRLRKEM 237
NIYA GDW GV RLRK M
Sbjct: 427 NIYALAGDWSGVARLRKMM 445
>ref|XP_002324255.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222865689|gb|EEF02820.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 547
Score = 93.2 bits (230), Expect = 3e-17
Identities = 43/77 (55%), Positives = 58/77 (75%)
Frame = +1
Query: 1 GRLREAYDTILKMPMKPNTVLWGILLSTCKVHNNVDLAEIAAMNLIELDPDDPWARVMLS 180
GRL +A D I KMPMKP++ +WG LLS+C+ H+N+D+A IA +L EL+PDD V+LS
Sbjct: 402 GRLSQALDVIEKMPMKPDSKIWGSLLSSCRTHSNLDIAIIAMEHLEELEPDDTGNYVLLS 461
Query: 181 NIYAEIGDWGGVMRLRK 231
NIYA++ W GV R+RK
Sbjct: 462 NIYADLAKWDGVSRMRK 478