BLASTX nr result

ID: Zingiber23_contig00041486 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00041486
         (344 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s...   201   6e-50
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s...   198   7e-49
tpg|DAA37181.1| TPA: putative DNA-directed RNA polymerase family...   196   3e-48
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S...   196   3e-48
gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japo...   195   6e-48
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g...   195   6e-48
emb|CBI16226.3| unnamed protein product [Vitis vinifera]              187   9e-46
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s...   187   9e-46
gb|ACJ63308.1| RNA polymerase III large subunit [Drimys winteri]      181   9e-44
ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [A...   177   1e-42
gb|AAS79689.1| RNA polymerase III large subunit [Welwitschia mir...   177   2e-42
gb|ACJ63307.1| RNA polymerase III large subunit [Asparagus offic...   176   4e-42
gb|ACJ63310.1| RNA polymerase III large subunit [Liriodendron tu...   175   5e-42
gb|AAS79690.1| RNA polymerase III large subunit [Ephedra viridis]     175   6e-42
gb|AAS79695.1| RNA polymerase III large subunit [Cycas revoluta]      174   8e-42
gb|AAS79694.1| RNA polymerase III large subunit [Pinus nigra]         174   8e-42
gb|ACJ63309.1| RNA polymerase III large subunit [Illicium parvif...   174   8e-42
gb|AAS79697.1| RNA polymerase III large subunit [Ginkgo biloba]       174   1e-41
gb|AAS79696.1| RNA polymerase III large subunit [Zamia muricata]      173   2e-41
gb|EMT01541.1| DNA-directed RNA polymerase III subunit RPC1 [Aeg...   172   4e-41

>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Setaria
            italica]
          Length = 1397

 Score =  201 bits (512), Expect = 6e-50
 Identities = 95/114 (83%), Positives = 103/114 (90%)
 Frame = +3

Query: 3    DDVQPGEHLTSQKKRKIDDGYRECYDLISSYSKGKLSLQPGCNAAQTLELKITNVLNEIR 182
            DDVQPGEHL  QKK+KID+GY++C+DLIS ++KG L+L PGCNAAQTLE KIT VLNEIR
Sbjct: 705  DDVQPGEHLNRQKKKKIDEGYKQCHDLISLFAKGALALHPGCNAAQTLEHKITGVLNEIR 764

Query: 183  ATAGNVCMDELQWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFI 344
              AGNVCMD L WRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFI
Sbjct: 765  TAAGNVCMDTLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFI 818


>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
            brachyantha]
          Length = 1389

 Score =  198 bits (503), Expect = 7e-49
 Identities = 92/114 (80%), Positives = 104/114 (91%)
 Frame = +3

Query: 3    DDVQPGEHLTSQKKRKIDDGYRECYDLISSYSKGKLSLQPGCNAAQTLELKITNVLNEIR 182
            DDV+PGEHL  QKK+KID+GY+EC+DLI+S+SKG L+LQPGCNAAQTLE KIT+VLN+IR
Sbjct: 686  DDVRPGEHLDQQKKKKIDEGYKECHDLITSFSKGALTLQPGCNAAQTLEHKITHVLNKIR 745

Query: 183  ATAGNVCMDELQWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFI 344
              AGN+CMD L WRNSPLIMSQCGSKGSPINISQMV CVGQQSVGG RAP+GFI
Sbjct: 746  EAAGNICMDTLHWRNSPLIMSQCGSKGSPINISQMVVCVGQQSVGGHRAPNGFI 799


>tpg|DAA37181.1| TPA: putative DNA-directed RNA polymerase family protein [Zea mays]
          Length = 1030

 Score =  196 bits (497), Expect = 3e-48
 Identities = 92/114 (80%), Positives = 102/114 (89%)
 Frame = +3

Query: 3    DDVQPGEHLTSQKKRKIDDGYRECYDLISSYSKGKLSLQPGCNAAQTLELKITNVLNEIR 182
            DDVQPGEHL  QKK++ID GY++C+DLIS ++KG L+L PGCNAAQTLE  IT VLNEIR
Sbjct: 702  DDVQPGEHLNRQKKKEIDGGYKKCHDLISLFAKGALALHPGCNAAQTLEHNITGVLNEIR 761

Query: 183  ATAGNVCMDELQWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFI 344
            + AGNVCMD L WRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGF+
Sbjct: 762  SIAGNVCMDTLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFL 815


>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
            gi|241937900|gb|EES11045.1| hypothetical protein
            SORBIDRAFT_06g021120 [Sorghum bicolor]
          Length = 1391

 Score =  196 bits (497), Expect = 3e-48
 Identities = 92/114 (80%), Positives = 102/114 (89%)
 Frame = +3

Query: 3    DDVQPGEHLTSQKKRKIDDGYRECYDLISSYSKGKLSLQPGCNAAQTLELKITNVLNEIR 182
            DDVQPGEHL  QKK++ID GY++C+DLIS ++KG L+L PGCNAAQTLE  IT VLNEIR
Sbjct: 699  DDVQPGEHLNRQKKKEIDGGYKKCHDLISLFAKGALALHPGCNAAQTLEHNITGVLNEIR 758

Query: 183  ATAGNVCMDELQWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFI 344
            + AGNVCMD L WRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGF+
Sbjct: 759  SIAGNVCMDTLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFL 812


>gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japonica Group]
          Length = 1321

 Score =  195 bits (495), Expect = 6e-48
 Identities = 93/114 (81%), Positives = 100/114 (87%)
 Frame = +3

Query: 3   DDVQPGEHLTSQKKRKIDDGYRECYDLISSYSKGKLSLQPGCNAAQTLELKITNVLNEIR 182
           DDVQPGEHL  +KK KID GY++C+DLI+SYSKG L LQPGCNAAQTLE  IT VLNEIR
Sbjct: 630 DDVQPGEHLNQEKKMKIDGGYKDCHDLIASYSKGALRLQPGCNAAQTLEQSITRVLNEIR 689

Query: 183 ATAGNVCMDELQWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFI 344
             AG VCM+ L WRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAP+GFI
Sbjct: 690 EEAGKVCMNTLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFI 743


>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
            gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
            Japonica Group] gi|38347455|emb|CAD41360.2|
            OSJNBa0076N16.24 [Oryza sativa Japonica Group]
            gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
            Japonica Group] gi|116310339|emb|CAH67354.1|
            OSIGBa0130B08.14 [Oryza sativa Indica Group]
            gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
            Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|218195112|gb|EEC77539.1| hypothetical protein
            OsI_16437 [Oryza sativa Indica Group]
          Length = 1383

 Score =  195 bits (495), Expect = 6e-48
 Identities = 93/114 (81%), Positives = 100/114 (87%)
 Frame = +3

Query: 3    DDVQPGEHLTSQKKRKIDDGYRECYDLISSYSKGKLSLQPGCNAAQTLELKITNVLNEIR 182
            DDVQPGEHL  +KK KID GY++C+DLI+SYSKG L LQPGCNAAQTLE  IT VLNEIR
Sbjct: 692  DDVQPGEHLNQEKKMKIDGGYKDCHDLIASYSKGALRLQPGCNAAQTLEQSITRVLNEIR 751

Query: 183  ATAGNVCMDELQWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFI 344
              AG VCM+ L WRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAP+GFI
Sbjct: 752  EEAGKVCMNTLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFI 805


>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
          Length = 1819

 Score =  187 bits (476), Expect = 9e-46
 Identities = 87/114 (76%), Positives = 98/114 (85%)
 Frame = +3

Query: 3    DDVQPGEHLTSQKKRKIDDGYRECYDLISSYSKGKLSLQPGCNAAQTLELKITNVLNEIR 182
            DDVQPG  L  QK ++I++GY  C++LI  Y+KGKL LQPGCNAAQTLE +IT VLN+IR
Sbjct: 698  DDVQPGGLLNDQKSKRIEEGYENCHELIQQYNKGKLKLQPGCNAAQTLEAEITGVLNKIR 757

Query: 183  ATAGNVCMDELQWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFI 344
             T  NVCM+EL WRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRAPDGFI
Sbjct: 758  ETTANVCMEELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPDGFI 811


>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
            vinifera]
          Length = 1383

 Score =  187 bits (476), Expect = 9e-46
 Identities = 87/114 (76%), Positives = 98/114 (85%)
 Frame = +3

Query: 3    DDVQPGEHLTSQKKRKIDDGYRECYDLISSYSKGKLSLQPGCNAAQTLELKITNVLNEIR 182
            DDVQPG  L  QK ++I++GY  C++LI  Y+KGKL LQPGCNAAQTLE +IT VLN+IR
Sbjct: 698  DDVQPGGLLNDQKSKRIEEGYENCHELIQQYNKGKLKLQPGCNAAQTLEAEITGVLNKIR 757

Query: 183  ATAGNVCMDELQWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFI 344
             T  NVCM+EL WRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRAPDGFI
Sbjct: 758  ETTANVCMEELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPDGFI 811


>gb|ACJ63308.1| RNA polymerase III large subunit [Drimys winteri]
          Length = 547

 Score =  181 bits (459), Expect = 9e-44
 Identities = 88/114 (77%), Positives = 96/114 (84%)
 Frame = +3

Query: 3   DDVQPGEHLTSQKKRKIDDGYRECYDLISSYSKGKLSLQPGCNAAQTLELKITNVLNEIR 182
           +DVQP EHL  QKK  I+ GY EC +LI SY+KG L+LQ GCNAAQTLE +IT VLN++R
Sbjct: 192 EDVQPDEHLNHQKKTTIEKGYEECDNLILSYNKGTLALQSGCNAAQTLESRITGVLNKVR 251

Query: 183 ATAGNVCMDELQWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFI 344
            TA NVCMD L WRNSPLIMS CGSKGSPINISQMVACVGQQSVGGRRAPDGFI
Sbjct: 252 DTAANVCMDTLHWRNSPLIMSCCGSKGSPINISQMVACVGQQSVGGRRAPDGFI 305


>ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [Amborella trichopoda]
            gi|548832896|gb|ERM95665.1| hypothetical protein
            AMTR_s00023p00196820 [Amborella trichopoda]
          Length = 1383

 Score =  177 bits (449), Expect = 1e-42
 Identities = 85/114 (74%), Positives = 93/114 (81%)
 Frame = +3

Query: 3    DDVQPGEHLTSQKKRKIDDGYRECYDLISSYSKGKLSLQPGCNAAQTLELKITNVLNEIR 182
            DDV PG HLT QK+ +I  GY  C   I +Y KGKLSL+PGCNAAQTLE +IT VLN IR
Sbjct: 692  DDVLPGSHLTKQKEEQIKGGYSNCDAFIDAYDKGKLSLKPGCNAAQTLEAEITRVLNGIR 751

Query: 183  ATAGNVCMDELQWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFI 344
              A  VCM+EL WRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRAP+GFI
Sbjct: 752  DAAAKVCMEELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFI 805


>gb|AAS79689.1| RNA polymerase III large subunit [Welwitschia mirabilis]
          Length = 548

 Score =  177 bits (448), Expect = 2e-42
 Identities = 85/114 (74%), Positives = 97/114 (85%)
 Frame = +3

Query: 3   DDVQPGEHLTSQKKRKIDDGYRECYDLISSYSKGKLSLQPGCNAAQTLELKITNVLNEIR 182
           DDVQPG  L+SQK+ +I +GY +C   I  Y+KGKLSLQPGCNAAQTLE +IT  LN+IR
Sbjct: 194 DDVQPGARLSSQKEERIKEGYSKCGMHIDLYNKGKLSLQPGCNAAQTLEAEITGELNKIR 253

Query: 183 ATAGNVCMDELQWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFI 344
             AG+VC+ EL WRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRAP+GFI
Sbjct: 254 EIAGSVCLKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFI 307


>gb|ACJ63307.1| RNA polymerase III large subunit [Asparagus officinalis]
          Length = 544

 Score =  176 bits (445), Expect = 4e-42
 Identities = 85/114 (74%), Positives = 92/114 (80%)
 Frame = +3

Query: 3   DDVQPGEHLTSQKKRKIDDGYRECYDLISSYSKGKLSLQPGCNAAQTLELKITNVLNEIR 182
           DDVQPGE L  QKK  IDDGY  C   I  Y   KL L+PG NAA+TLE++IT VLNEIR
Sbjct: 192 DDVQPGERLNQQKKMTIDDGYGRCISFIELYENRKLKLRPGANAAETLEVEITEVLNEIR 251

Query: 183 ATAGNVCMDELQWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFI 344
            TAG+VCM EL WRNSPLIMSQCGSKGS INISQM+ACVGQQSVGGRRAP+GFI
Sbjct: 252 KTAGDVCMKELHWRNSPLIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFI 305


>gb|ACJ63310.1| RNA polymerase III large subunit [Liriodendron tulipifera]
          Length = 546

 Score =  175 bits (444), Expect = 5e-42
 Identities = 85/114 (74%), Positives = 92/114 (80%)
 Frame = +3

Query: 3   DDVQPGEHLTSQKKRKIDDGYRECYDLISSYSKGKLSLQPGCNAAQTLELKITNVLNEIR 182
           DDVQPGEHL   KK +I+ GY+EC DLI+ Y+ G L L PGCNAAQTLE  IT  LN+IR
Sbjct: 194 DDVQPGEHLNRNKKLEIEKGYKECDDLINRYNTGGLKLLPGCNAAQTLESNITGKLNDIR 253

Query: 183 ATAGNVCMDELQWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFI 344
             A  VCM  L WRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAP+GFI
Sbjct: 254 EAAAKVCMASLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFI 307


>gb|AAS79690.1| RNA polymerase III large subunit [Ephedra viridis]
          Length = 548

 Score =  175 bits (443), Expect = 6e-42
 Identities = 82/114 (71%), Positives = 97/114 (85%)
 Frame = +3

Query: 3   DDVQPGEHLTSQKKRKIDDGYRECYDLISSYSKGKLSLQPGCNAAQTLELKITNVLNEIR 182
           DDVQPG  LT++K+ ++ +GY +C   I  Y+KGKL+LQPGCNAAQTLE +IT  LN+IR
Sbjct: 194 DDVQPGARLTAKKEERVTEGYNKCDKHIDLYNKGKLNLQPGCNAAQTLEAEITGELNKIR 253

Query: 183 ATAGNVCMDELQWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFI 344
             AG+VC+ EL WRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRAP+GFI
Sbjct: 254 ELAGSVCLRELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFI 307


>gb|AAS79695.1| RNA polymerase III large subunit [Cycas revoluta]
          Length = 548

 Score =  174 bits (442), Expect = 8e-42
 Identities = 83/114 (72%), Positives = 97/114 (85%)
 Frame = +3

Query: 3   DDVQPGEHLTSQKKRKIDDGYRECYDLISSYSKGKLSLQPGCNAAQTLELKITNVLNEIR 182
           DDVQPG  L++QK+ +I +GY +C   I  Y+KGKL+LQPGCNAAQTLE +IT  LN+IR
Sbjct: 194 DDVQPGTRLSAQKEERIKEGYSKCDMHIDLYNKGKLTLQPGCNAAQTLEAEITGELNKIR 253

Query: 183 ATAGNVCMDELQWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFI 344
             AG+VC+ EL WRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRAP+GFI
Sbjct: 254 EIAGSVCLKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFI 307


>gb|AAS79694.1| RNA polymerase III large subunit [Pinus nigra]
          Length = 548

 Score =  174 bits (442), Expect = 8e-42
 Identities = 83/114 (72%), Positives = 97/114 (85%)
 Frame = +3

Query: 3   DDVQPGEHLTSQKKRKIDDGYRECYDLISSYSKGKLSLQPGCNAAQTLELKITNVLNEIR 182
           DDVQPG  LT+QK+ +I +GY +C   I  Y+KGKL+LQPGCN+AQTLE +IT  LN+IR
Sbjct: 194 DDVQPGARLTAQKEERIREGYNKCDMHIDLYNKGKLTLQPGCNSAQTLEAEITGELNKIR 253

Query: 183 ATAGNVCMDELQWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFI 344
             AG+VC+ EL WRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRAP+GFI
Sbjct: 254 EIAGSVCLRELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFI 307


>gb|ACJ63309.1| RNA polymerase III large subunit [Illicium parviflorum]
          Length = 546

 Score =  174 bits (442), Expect = 8e-42
 Identities = 83/114 (72%), Positives = 97/114 (85%)
 Frame = +3

Query: 3   DDVQPGEHLTSQKKRKIDDGYRECYDLISSYSKGKLSLQPGCNAAQTLELKITNVLNEIR 182
           DDVQPG  LT+QK+ +I +GY +C   I  Y+KGKL+LQPGCN+AQTLE +IT  LN+IR
Sbjct: 192 DDVQPGARLTAQKEERIREGYNKCDMHIDLYNKGKLTLQPGCNSAQTLEAEITGELNKIR 251

Query: 183 ATAGNVCMDELQWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFI 344
             AG+VC+ EL WRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRAP+GFI
Sbjct: 252 EIAGSVCLRELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFI 305


>gb|AAS79697.1| RNA polymerase III large subunit [Ginkgo biloba]
          Length = 548

 Score =  174 bits (440), Expect = 1e-41
 Identities = 82/114 (71%), Positives = 98/114 (85%)
 Frame = +3

Query: 3   DDVQPGEHLTSQKKRKIDDGYRECYDLISSYSKGKLSLQPGCNAAQTLELKITNVLNEIR 182
           DDVQPG  L+++K+++I +GY +C   I  Y+KGKL+LQPGCNAAQTLE +IT  LN+IR
Sbjct: 194 DDVQPGSRLSAKKEQRIREGYSKCDMHIDLYNKGKLTLQPGCNAAQTLEAEITGELNKIR 253

Query: 183 ATAGNVCMDELQWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFI 344
             AG+VC+ EL WRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRAP+GFI
Sbjct: 254 EVAGSVCLKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFI 307


>gb|AAS79696.1| RNA polymerase III large subunit [Zamia muricata]
          Length = 548

 Score =  173 bits (439), Expect = 2e-41
 Identities = 82/114 (71%), Positives = 97/114 (85%)
 Frame = +3

Query: 3   DDVQPGEHLTSQKKRKIDDGYRECYDLISSYSKGKLSLQPGCNAAQTLELKITNVLNEIR 182
           DDVQPG  L+++K+ +I +GY +C   I  Y+KGKL+LQPGCNAAQTLE +IT  LN+IR
Sbjct: 194 DDVQPGTRLSAKKEERIKEGYSKCDMHIDLYNKGKLTLQPGCNAAQTLEAEITGELNKIR 253

Query: 183 ATAGNVCMDELQWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFI 344
             AG+VC+ EL WRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRAP+GFI
Sbjct: 254 EVAGSVCLKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFI 307


>gb|EMT01541.1| DNA-directed RNA polymerase III subunit RPC1 [Aegilops tauschii]
          Length = 1117

 Score =  172 bits (436), Expect = 4e-41
 Identities = 81/114 (71%), Positives = 95/114 (83%)
 Frame = +3

Query: 3   DDVQPGEHLTSQKKRKIDDGYRECYDLISSYSKGKLSLQPGCNAAQTLELKITNVLNEIR 182
           DDVQPGE L  +K + I +GY+EC++LI+ YSKG L  QPGC+ AQTLE +I+ VLN++R
Sbjct: 417 DDVQPGESLNEKKGKTIGEGYQECHELIAQYSKGALKPQPGCSRAQTLEARISGVLNKLR 476

Query: 183 ATAGNVCMDELQWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFI 344
            TAG+ CM  L WRNSPLIMSQCGSKGSPINISQMV CVGQQSVGGRRAP+GFI
Sbjct: 477 DTAGDHCMSTLHWRNSPLIMSQCGSKGSPINISQMVVCVGQQSVGGRRAPNGFI 530


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