BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00041443
         (292 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA03104.1| light-harvesting chlorophyll a/b-binding protein...   111   9e-23
gb|ABW89227.1| chloroplast light-harvesting chlorophyll a/b-bind...   111   9e-23
gb|ABW89213.1| chloroplast light-harvesting chlorophyll a/b-bind...   111   9e-23
sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding pro...   109   3e-22
pdb|1RWT|A Chain A, Crystal Structure Of Spinach Major Light-har...   109   3e-22
gb|ABW89216.1| chloroplast light-harvesting chlorophyll a/b-bind...   109   3e-22
sp|P27492.1|CB21_TOBAC RecName: Full=Chlorophyll a-b binding pro...   109   4e-22
dbj|BAA25390.1| light harvesting chlorophyll a/b-binding protein...   109   4e-22
sp|P04781.1|CB23_PETSP RecName: Full=Chlorophyll a-b binding pro...   109   4e-22
ref|XP_006368025.1| PREDICTED: chlorophyll a-b binding protein 1...   109   4e-22
ref|XP_006365561.1| PREDICTED: chlorophyll a-b binding protein 1...   109   4e-22
ref|XP_006364025.1| PREDICTED: chlorophyll a-b binding protein 5...   109   4e-22
ref|XP_004233093.1| PREDICTED: chlorophyll a-b binding protein 1...   109   4e-22
gb|AAA80594.1| chlorophyll a/b binding protein [Solanum tuberosum]    109   4e-22
gb|AAA33702.1| Major Cab protein [Petunia x hybrida]                  109   4e-22
gb|AAA33700.1| Major Cab protein [Petunia x hybrida]                  109   4e-22
gb|AAA80592.1| chlorophyll a/b binding protein [Solanum tuberosum]    109   4e-22
dbj|BAA25389.1| light harvesting chlorophyll a/b-binding protein...   109   4e-22
sp|P04783.1|CB25_PETSP RecName: Full=Chlorophyll a-b binding pro...   109   4e-22
sp|P10707.1|CB2D_SOLLC RecName: Full=Chlorophyll a-b binding pro...   109   4e-22

>dbj|BAA03104.1| light-harvesting chlorophyll a/b-binding protein (LHCP) precursor
           [Lactuca sativa]
          Length = 266

 Score =  111 bits (278), Expect = 9e-23
 Identities = 52/54 (96%), Positives = 53/54 (98%)
 Frame = +3

Query: 3   KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAWNYATNFAPGK 164
           KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAW+YATNF PGK
Sbjct: 213 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAWSYATNFVPGK 266


>gb|ABW89227.1| chloroplast light-harvesting chlorophyll a/b-binding protein
           [Helianthus annuus]
          Length = 116

 Score =  111 bits (278), Expect = 9e-23
 Identities = 52/54 (96%), Positives = 53/54 (98%)
 Frame = +3

Query: 3   KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAWNYATNFAPGK 164
           KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAW+YATNF PGK
Sbjct: 63  KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAWSYATNFVPGK 116


>gb|ABW89213.1| chloroplast light-harvesting chlorophyll a/b-binding protein
           [Helianthus annuus] gi|159138423|gb|ABW89214.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus] gi|159138425|gb|ABW89215.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus] gi|159138429|gb|ABW89217.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus] gi|159138433|gb|ABW89219.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus] gi|159138437|gb|ABW89221.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus] gi|159138439|gb|ABW89222.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus] gi|159138441|gb|ABW89223.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus] gi|159138443|gb|ABW89224.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus] gi|159138445|gb|ABW89225.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus] gi|159138447|gb|ABW89226.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus] gi|159138451|gb|ABW89228.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus] gi|159138453|gb|ABW89229.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus] gi|159138455|gb|ABW89230.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus] gi|159138457|gb|ABW89231.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus]
          Length = 116

 Score =  111 bits (278), Expect = 9e-23
 Identities = 52/54 (96%), Positives = 53/54 (98%)
 Frame = +3

Query: 3   KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAWNYATNFAPGK 164
           KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAW+YATNF PGK
Sbjct: 63  KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAWSYATNFVPGK 116


>sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
           AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
           Precursor gi|14240|emb|CAA32526.1| chlorophyll a/b
           binding protein precursor [Spinacia oleracea]
           gi|193783447|emb|CAJ77389.3| major chlorophyll a/b
           binding protein LHCb1.3 [Spinacia oleracea]
          Length = 267

 Score =  109 bits (273), Expect = 3e-22
 Identities = 51/54 (94%), Positives = 52/54 (96%)
 Frame = +3

Query: 3   KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAWNYATNFAPGK 164
           KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV NNAWN+ATNF PGK
Sbjct: 214 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWNFATNFVPGK 267


>pdb|1RWT|A Chain A, Crystal Structure Of Spinach Major Light-harvesting
           Complex At 2.72 Angstrom Resolution
           gi|47168889|pdb|1RWT|B Chain B, Crystal Structure Of
           Spinach Major Light-harvesting Complex At 2.72 Angstrom
           Resolution gi|47168890|pdb|1RWT|C Chain C, Crystal
           Structure Of Spinach Major Light-harvesting Complex At
           2.72 Angstrom Resolution gi|47168891|pdb|1RWT|D Chain D,
           Crystal Structure Of Spinach Major Light-harvesting
           Complex At 2.72 Angstrom Resolution
           gi|47168892|pdb|1RWT|E Chain E, Crystal Structure Of
           Spinach Major Light-harvesting Complex At 2.72 Angstrom
           Resolution gi|47168893|pdb|1RWT|F Chain F, Crystal
           Structure Of Spinach Major Light-harvesting Complex At
           2.72 Angstrom Resolution gi|47168894|pdb|1RWT|G Chain G,
           Crystal Structure Of Spinach Major Light-harvesting
           Complex At 2.72 Angstrom Resolution
           gi|47168895|pdb|1RWT|H Chain H, Crystal Structure Of
           Spinach Major Light-harvesting Complex At 2.72 Angstrom
           Resolution gi|47168896|pdb|1RWT|I Chain I, Crystal
           Structure Of Spinach Major Light-harvesting Complex At
           2.72 Angstrom Resolution gi|47168897|pdb|1RWT|J Chain J,
           Crystal Structure Of Spinach Major Light-harvesting
           Complex At 2.72 Angstrom Resolution
          Length = 232

 Score =  109 bits (273), Expect = 3e-22
 Identities = 51/54 (94%), Positives = 52/54 (96%)
 Frame = +3

Query: 3   KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAWNYATNFAPGK 164
           KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV NNAWN+ATNF PGK
Sbjct: 179 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWNFATNFVPGK 232


>gb|ABW89216.1| chloroplast light-harvesting chlorophyll a/b-binding protein
           [Helianthus annuus] gi|159138431|gb|ABW89218.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus] gi|159138435|gb|ABW89220.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus]
          Length = 116

 Score =  109 bits (273), Expect = 3e-22
 Identities = 51/53 (96%), Positives = 52/53 (98%)
 Frame = +3

Query: 3   KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAWNYATNFAPG 161
           KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAW+YATNF PG
Sbjct: 63  KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAWSYATNFVPG 115


>sp|P27492.1|CB21_TOBAC RecName: Full=Chlorophyll a-b binding protein 16, chloroplastic;
           AltName: Full=LHCII type I CAB-16; Short=LHCP; Flags:
           Precursor gi|19819|emb|CAA36955.1| unnamed protein
           product [Nicotiana tabacum]
          Length = 266

 Score =  109 bits (272), Expect = 4e-22
 Identities = 51/54 (94%), Positives = 52/54 (96%)
 Frame = +3

Query: 3   KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAWNYATNFAPGK 164
           KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV NNAW+YATNF PGK
Sbjct: 213 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 266


>dbj|BAA25390.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
           sylvestris]
          Length = 265

 Score =  109 bits (272), Expect = 4e-22
 Identities = 51/54 (94%), Positives = 52/54 (96%)
 Frame = +3

Query: 3   KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAWNYATNFAPGK 164
           KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV NNAW+YATNF PGK
Sbjct: 212 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 265


>sp|P04781.1|CB23_PETSP RecName: Full=Chlorophyll a-b binding protein 22R, chloroplastic;
           AltName: Full=LHCII type I CAB-22R; Short=LHCP; Flags:
           Precursor gi|20479|emb|CAA26213.1| unnamed protein
           product [Petunia sp.]
          Length = 267

 Score =  109 bits (272), Expect = 4e-22
 Identities = 51/54 (94%), Positives = 52/54 (96%)
 Frame = +3

Query: 3   KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAWNYATNFAPGK 164
           KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV NNAW+YATNF PGK
Sbjct: 214 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267


>ref|XP_006368025.1| PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like
           [Solanum tuberosum]
          Length = 265

 Score =  109 bits (272), Expect = 4e-22
 Identities = 51/54 (94%), Positives = 52/54 (96%)
 Frame = +3

Query: 3   KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAWNYATNFAPGK 164
           KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV NNAW+YATNF PGK
Sbjct: 212 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 265


>ref|XP_006365561.1| PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like
           [Solanum tuberosum]
          Length = 265

 Score =  109 bits (272), Expect = 4e-22
 Identities = 51/54 (94%), Positives = 52/54 (96%)
 Frame = +3

Query: 3   KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAWNYATNFAPGK 164
           KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV NNAW+YATNF PGK
Sbjct: 212 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 265


>ref|XP_006364025.1| PREDICTED: chlorophyll a-b binding protein 50, chloroplastic-like
           [Solanum tuberosum]
          Length = 267

 Score =  109 bits (272), Expect = 4e-22
 Identities = 51/54 (94%), Positives = 52/54 (96%)
 Frame = +3

Query: 3   KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAWNYATNFAPGK 164
           KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV NNAW+YATNF PGK
Sbjct: 214 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267


>ref|XP_004233093.1| PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like
           [Solanum lycopersicum]
          Length = 394

 Score =  109 bits (272), Expect = 4e-22
 Identities = 51/54 (94%), Positives = 52/54 (96%)
 Frame = +3

Query: 3   KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAWNYATNFAPGK 164
           KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV NNAW+YATNF PGK
Sbjct: 341 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 394



 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 41/42 (97%), Positives = 41/42 (97%)
 Frame = +3

Query: 3   KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANN 128
           KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV NN
Sbjct: 212 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253


>gb|AAA80594.1| chlorophyll a/b binding protein [Solanum tuberosum]
          Length = 265

 Score =  109 bits (272), Expect = 4e-22
 Identities = 51/54 (94%), Positives = 52/54 (96%)
 Frame = +3

Query: 3   KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAWNYATNFAPGK 164
           KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV NNAW+YATNF PGK
Sbjct: 212 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 265


>gb|AAA33702.1| Major Cab protein [Petunia x hybrida]
          Length = 125

 Score =  109 bits (272), Expect = 4e-22
 Identities = 51/54 (94%), Positives = 52/54 (96%)
 Frame = +3

Query: 3   KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAWNYATNFAPGK 164
           KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV NNAW+YATNF PGK
Sbjct: 72  KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 125


>gb|AAA33700.1| Major Cab protein [Petunia x hybrida]
          Length = 76

 Score =  109 bits (272), Expect = 4e-22
 Identities = 51/54 (94%), Positives = 52/54 (96%)
 Frame = +3

Query: 3   KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAWNYATNFAPGK 164
           KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV NNAW+YATNF PGK
Sbjct: 23  KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 76


>gb|AAA80592.1| chlorophyll a/b binding protein [Solanum tuberosum]
          Length = 265

 Score =  109 bits (272), Expect = 4e-22
 Identities = 51/54 (94%), Positives = 52/54 (96%)
 Frame = +3

Query: 3   KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAWNYATNFAPGK 164
           KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV NNAW+YATNF PGK
Sbjct: 212 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 265


>dbj|BAA25389.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
           sylvestris]
          Length = 265

 Score =  109 bits (272), Expect = 4e-22
 Identities = 51/54 (94%), Positives = 52/54 (96%)
 Frame = +3

Query: 3   KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAWNYATNFAPGK 164
           KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV NNAW+YATNF PGK
Sbjct: 212 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 265


>sp|P04783.1|CB25_PETSP RecName: Full=Chlorophyll a-b binding protein 91R, chloroplastic;
           AltName: Full=LHCII type I CAB-91R; Short=LHCP; Flags:
           Precursor gi|20487|emb|CAA26209.1| unnamed protein
           product [Petunia sp.]
          Length = 267

 Score =  109 bits (272), Expect = 4e-22
 Identities = 51/54 (94%), Positives = 52/54 (96%)
 Frame = +3

Query: 3   KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAWNYATNFAPGK 164
           KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV NNAW+YATNF PGK
Sbjct: 214 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267


>sp|P10707.1|CB2D_SOLLC RecName: Full=Chlorophyll a-b binding protein 1D; AltName:
           Full=LHCII type I CAB-1D; Short=LHCP
           gi|170428|gb|AAA34158.1| chlorophyll a/b-binding protein
           Cab-1D, partial [Solanum lycopersicum]
           gi|224929|prf||1204205D protein 1D,chlorophyll binding
          Length = 116

 Score =  109 bits (272), Expect = 4e-22
 Identities = 51/54 (94%), Positives = 52/54 (96%)
 Frame = +3

Query: 3   KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAWNYATNFAPGK 164
           KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV NNAW+YATNF PGK
Sbjct: 63  KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 116