BLASTX nr result

ID: Zingiber23_contig00041411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00041411
         (296 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB09198.1| unnamed protein product [Arabidopsis thaliana]         55   7e-06
ref|NP_568618.1| uncharacterized protein [Arabidopsis thaliana] ...    55   7e-06
gb|ABK28739.1| unknown [Arabidopsis thaliana]                          55   7e-06
gb|AAK96838.1| Unknown protein [Arabidopsis thaliana]                  55   7e-06

>dbj|BAB09198.1| unnamed protein product [Arabidopsis thaliana]
          Length = 211

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 33/94 (35%), Positives = 51/94 (54%)
 Frame = -3

Query: 285 LEASFTGKYETDAKAGKGSTTLSVGTNVGEAKLKALATIALEAADYSPPSFAFSLSKPDS 106
           ++AS  GKY+TD  +G GS       N G+ KL+A  T A   A  +    A ++ KP S
Sbjct: 1   MKASIKGKYDTDKTSGIGSLAF----NAGDIKLRATMTDATLVAGPTLTGLALAVEKPGS 56

Query: 105 FSIRYSPEKKDGDPPNLRFKFMNSMNVMGGRVNM 4
           F + Y+  KKD     +RF+FMN++ +    +N+
Sbjct: 57  FIVEYNVPKKD-----VRFQFMNTVRIAEKPLNL 85


>ref|NP_568618.1| uncharacterized protein [Arabidopsis thaliana]
           gi|75151846|sp|Q8H0Y1.1|OP24B_ARATH RecName: Full=Outer
           envelope pore protein 24B, chloroplastic; AltName:
           Full=Chloroplastic outer envelope pore protein of 24 kDa
           B gi|24899671|gb|AAN65050.1| Unknown protein
           [Arabidopsis thaliana] gi|98961909|gb|ABF59284.1|
           unknown protein [Arabidopsis thaliana]
           gi|332007511|gb|AED94894.1| uncharacterized protein
           AT5G42960 [Arabidopsis thaliana]
          Length = 213

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 33/94 (35%), Positives = 51/94 (54%)
 Frame = -3

Query: 285 LEASFTGKYETDAKAGKGSTTLSVGTNVGEAKLKALATIALEAADYSPPSFAFSLSKPDS 106
           ++AS  GKY+TD  +G GS       N G+ KL+A  T A   A  +    A ++ KP S
Sbjct: 3   MKASIKGKYDTDKTSGIGSLAF----NAGDIKLRATMTDATLVAGPTLTGLALAVEKPGS 58

Query: 105 FSIRYSPEKKDGDPPNLRFKFMNSMNVMGGRVNM 4
           F + Y+  KKD     +RF+FMN++ +    +N+
Sbjct: 59  FIVEYNVPKKD-----VRFQFMNTVRIAEKPLNL 87


>gb|ABK28739.1| unknown [Arabidopsis thaliana]
          Length = 214

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 33/94 (35%), Positives = 51/94 (54%)
 Frame = -3

Query: 285 LEASFTGKYETDAKAGKGSTTLSVGTNVGEAKLKALATIALEAADYSPPSFAFSLSKPDS 106
           ++AS  GKY+TD  +G GS       N G+ KL+A  T A   A  +    A ++ KP S
Sbjct: 3   MKASIKGKYDTDKTSGIGSLAF----NAGDIKLRATMTDATLVAGPTLTGLALAVEKPGS 58

Query: 105 FSIRYSPEKKDGDPPNLRFKFMNSMNVMGGRVNM 4
           F + Y+  KKD     +RF+FMN++ +    +N+
Sbjct: 59  FIVEYNVPKKD-----VRFQFMNTVRIAEKPLNL 87


>gb|AAK96838.1| Unknown protein [Arabidopsis thaliana]
          Length = 213

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 33/94 (35%), Positives = 51/94 (54%)
 Frame = -3

Query: 285 LEASFTGKYETDAKAGKGSTTLSVGTNVGEAKLKALATIALEAADYSPPSFAFSLSKPDS 106
           ++AS  GKY+TD  +G GS       N G+ KL+A  T A   A  +    A ++ KP S
Sbjct: 3   MKASIKGKYDTDKTSGIGSLAF----NAGDIKLRATMTDATLGAGPTLTGLALAVKKPGS 58

Query: 105 FSIRYSPEKKDGDPPNLRFKFMNSMNVMGGRVNM 4
           F + Y+  KKD     +RF+FMN++ +    +N+
Sbjct: 59  FIVEYNVPKKD-----VRFQFMNTVRIAEKPLNL 87


Top