BLASTX nr result
ID: Zingiber23_contig00041377
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00041377
(429 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subc... 232 3e-59
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e... 231 6e-59
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap... 231 1e-58
gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e... 229 4e-58
dbj|BAA22288.1| polyprotein [Oryza australiensis] 228 8e-58
gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-... 228 8e-58
emb|CAE03845.1| OSJNBb0089K06.4 [Oryza sativa Japonica Group] 225 4e-57
gb|ABF96491.1| retrotransposon protein, putative, Ty1-copia subc... 224 9e-57
gb|AAP03364.1| putative polyprotein [Oryza sativa Japonica Group] 224 9e-57
emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group] 224 1e-56
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc... 221 6e-56
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group] 221 6e-56
gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subc... 221 8e-56
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa... 219 4e-55
gb|AAX96622.1| retrotransposon protein, putative, Ty1-copia sub-... 218 8e-55
gb|ABF97078.1| retrotransposon protein, putative, Ty1-copia subc... 218 8e-55
gb|AAK52163.1|AC084831_17 putative polyprotein [Oryza sativa Jap... 218 8e-55
gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subc... 216 2e-54
gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group] 216 2e-54
gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subc... 216 2e-54
>gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1050
Score = 232 bits (592), Expect = 3e-59
Identities = 113/141 (80%), Positives = 126/141 (89%)
Frame = -3
Query: 424 ILGIQIYRDRSKRLLGLSQSIYIDKVLLRFVMQNSKKGFLPMSHGVSLSKTQGPSSREER 245
ILGI+IYRDRSKRL+GLSQS YIDKVL RF MQ+SKKGFLPMSHG++L K Q P + +ER
Sbjct: 761 ILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTDER 820
Query: 244 DRMDQIPYASAIGSIMYAMLCTRPDVSYALSMTSRYQSDPGESHWIAVKNILKYLRRTKE 65
++M IPYASAIGSIMYAMLCT PDVSYALS TSRYQSDPGESHWIAVKNILKYLRRTK+
Sbjct: 821 NKMSVIPYASAIGSIMYAMLCTHPDVSYALSATSRYQSDPGESHWIAVKNILKYLRRTKD 880
Query: 64 YFLIYGGNDELAVKGYSDASF 2
FL+YGG +EL VKGY+DASF
Sbjct: 881 MFLVYGGQEELVVKGYTDASF 901
>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1313
Score = 231 bits (590), Expect = 6e-59
Identities = 112/141 (79%), Positives = 129/141 (91%)
Frame = -3
Query: 424 ILGIQIYRDRSKRLLGLSQSIYIDKVLLRFVMQNSKKGFLPMSHGVSLSKTQGPSSREER 245
ILGI+IYRDRS+RL+GLSQS YIDKVL+RF MQN+KKGFLPMSHG+S SK+Q PS+ +ER
Sbjct: 1023 ILGIKIYRDRSRRLIGLSQSTYIDKVLIRFNMQNTKKGFLPMSHGISPSKSQRPSTTDER 1082
Query: 244 DRMDQIPYASAIGSIMYAMLCTRPDVSYALSMTSRYQSDPGESHWIAVKNILKYLRRTKE 65
DRM+ IPYASAIGSIMYAM+CTR DVSYALS+TSRYQ+DPGE HW AVKNILKYLRRTK+
Sbjct: 1083 DRMNGIPYASAIGSIMYAMICTRQDVSYALSVTSRYQADPGECHWTAVKNILKYLRRTKD 1142
Query: 64 YFLIYGGNDELAVKGYSDASF 2
FLIYGG++EL V GY+DASF
Sbjct: 1143 AFLIYGGDEELVVNGYTDASF 1163
>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
gi|62701883|gb|AAX92956.1| retrotransposon protein,
putative, Ty1-copia sub-class [Oryza sativa Japonica
Group] gi|108864259|gb|ABA92827.2| retrotransposon
protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1184
Score = 231 bits (588), Expect = 1e-58
Identities = 113/141 (80%), Positives = 125/141 (88%)
Frame = -3
Query: 424 ILGIQIYRDRSKRLLGLSQSIYIDKVLLRFVMQNSKKGFLPMSHGVSLSKTQGPSSREER 245
ILGI+IYRDRSKRL+GLSQS YIDKVL RF MQ+SKKGFLPMSHG++L K Q P + +ER
Sbjct: 898 ILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTDER 957
Query: 244 DRMDQIPYASAIGSIMYAMLCTRPDVSYALSMTSRYQSDPGESHWIAVKNILKYLRRTKE 65
++M IPYASAIGSIMYAMLCTRPDVSYALS TSRYQSDPGESHWIAVKNILKYLRRTK+
Sbjct: 958 NKMSVIPYASAIGSIMYAMLCTRPDVSYALSATSRYQSDPGESHWIAVKNILKYLRRTKD 1017
Query: 64 YFLIYGGNDELAVKGYSDASF 2
FL YGG +EL V GY+DASF
Sbjct: 1018 MFLAYGGQEELVVNGYTDASF 1038
>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 896
Score = 229 bits (583), Expect = 4e-58
Identities = 108/141 (76%), Positives = 127/141 (90%)
Frame = -3
Query: 424 ILGIQIYRDRSKRLLGLSQSIYIDKVLLRFVMQNSKKGFLPMSHGVSLSKTQGPSSREER 245
ILGI+IYRDRSKRL+GLSQ +YIDKVL RF MQNSK+GFLPM+HG++LSK Q P++ +ER
Sbjct: 607 ILGIRIYRDRSKRLIGLSQEMYIDKVLNRFNMQNSKRGFLPMAHGINLSKNQCPTTTDER 666
Query: 244 DRMDQIPYASAIGSIMYAMLCTRPDVSYALSMTSRYQSDPGESHWIAVKNILKYLRRTKE 65
D+M IPYASAIGSIMYAM+CTRPDVSYALS+TSRYQ+DP E HW AVKNILKYLRRTK+
Sbjct: 667 DKMSDIPYASAIGSIMYAMICTRPDVSYALSVTSRYQADPSEGHWTAVKNILKYLRRTKD 726
Query: 64 YFLIYGGNDELAVKGYSDASF 2
FL+YGG++EL V GY+DASF
Sbjct: 727 VFLVYGGDEELVVNGYTDASF 747
>dbj|BAA22288.1| polyprotein [Oryza australiensis]
Length = 1317
Score = 228 bits (580), Expect = 8e-58
Identities = 109/141 (77%), Positives = 124/141 (87%)
Frame = -3
Query: 424 ILGIQIYRDRSKRLLGLSQSIYIDKVLLRFVMQNSKKGFLPMSHGVSLSKTQGPSSREER 245
ILGI+IYRDRSKRL+GLSQS YIDKVL RF M +SKKGFLPMSHG++LSK Q P + +ER
Sbjct: 1027 ILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMHDSKKGFLPMSHGINLSKNQCPQTHDER 1086
Query: 244 DRMDQIPYASAIGSIMYAMLCTRPDVSYALSMTSRYQSDPGESHWIAVKNILKYLRRTKE 65
++M +PYASAIGSIMYAMLCTRPDVSYALS TSRYQSDPGE HW AVKNILKYLRRTK+
Sbjct: 1087 NKMGMVPYASAIGSIMYAMLCTRPDVSYALSATSRYQSDPGEGHWTAVKNILKYLRRTKD 1146
Query: 64 YFLIYGGNDELAVKGYSDASF 2
FL+YGG ++L V GY+DASF
Sbjct: 1147 MFLVYGGEEDLVVSGYTDASF 1167
>gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77550379|gb|ABA93176.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 938
Score = 228 bits (580), Expect = 8e-58
Identities = 110/141 (78%), Positives = 125/141 (88%)
Frame = -3
Query: 424 ILGIQIYRDRSKRLLGLSQSIYIDKVLLRFVMQNSKKGFLPMSHGVSLSKTQGPSSREER 245
ILGI+IY+DRSKRL+GLSQS YIDKVL RF MQ+SKKGFLPMSHG++L K Q P + ER
Sbjct: 746 ILGIRIYKDRSKRLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTNER 805
Query: 244 DRMDQIPYASAIGSIMYAMLCTRPDVSYALSMTSRYQSDPGESHWIAVKNILKYLRRTKE 65
++M IPYASAIGSIMYAMLCTRPDVSYALS TS+YQSDPGESHWIA+KNILKYLRRTK+
Sbjct: 806 NKMSVIPYASAIGSIMYAMLCTRPDVSYALSATSQYQSDPGESHWIALKNILKYLRRTKD 865
Query: 64 YFLIYGGNDELAVKGYSDASF 2
FL+YGG +EL V GY+DASF
Sbjct: 866 MFLVYGGQEELVVNGYTDASF 886
>emb|CAE03845.1| OSJNBb0089K06.4 [Oryza sativa Japonica Group]
Length = 873
Score = 225 bits (574), Expect = 4e-57
Identities = 110/141 (78%), Positives = 126/141 (89%)
Frame = -3
Query: 424 ILGIQIYRDRSKRLLGLSQSIYIDKVLLRFVMQNSKKGFLPMSHGVSLSKTQGPSSREER 245
ILGI+IYRDRSKRL+GLSQS YIDKVL RF MQ+SKKGFLPMS+G++L K Q P + +ER
Sbjct: 724 ILGIRIYRDRSKRLVGLSQSTYIDKVLKRFNMQDSKKGFLPMSYGINLGKNQYPQTTDER 783
Query: 244 DRMDQIPYASAIGSIMYAMLCTRPDVSYALSMTSRYQSDPGESHWIAVKNILKYLRRTKE 65
++M IPYASAIGSIMYAMLCTR DVSYALS+T+RYQSDPGESHWIAVKNILKYLRRTK+
Sbjct: 784 NKMSVIPYASAIGSIMYAMLCTRLDVSYALSVTNRYQSDPGESHWIAVKNILKYLRRTKD 843
Query: 64 YFLIYGGNDELAVKGYSDASF 2
FL+YGG +EL V GY+DASF
Sbjct: 844 MFLVYGGQEELVVNGYTDASF 864
>gb|ABF96491.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 767
Score = 224 bits (571), Expect = 9e-57
Identities = 109/141 (77%), Positives = 123/141 (87%)
Frame = -3
Query: 424 ILGIQIYRDRSKRLLGLSQSIYIDKVLLRFVMQNSKKGFLPMSHGVSLSKTQGPSSREER 245
ILGI+IYR+RSKRL+GLSQS YIDK+L RF MQ SKKGFLPMSHG++L K Q P + +ER
Sbjct: 501 ILGIRIYRERSKRLIGLSQSTYIDKLLKRFNMQYSKKGFLPMSHGINLGKNQCPQATDER 560
Query: 244 DRMDQIPYASAIGSIMYAMLCTRPDVSYALSMTSRYQSDPGESHWIAVKNILKYLRRTKE 65
++M IPYASAIG IMYAMLCTRPDVSYALS TSRYQ DPGESHWIAVKNILKYLRRTK+
Sbjct: 561 NKMSVIPYASAIGCIMYAMLCTRPDVSYALSATSRYQLDPGESHWIAVKNILKYLRRTKD 620
Query: 64 YFLIYGGNDELAVKGYSDASF 2
FL+YGG +EL V GY+DASF
Sbjct: 621 MFLVYGGQEELVVNGYTDASF 641
>gb|AAP03364.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 657
Score = 224 bits (571), Expect = 9e-57
Identities = 109/141 (77%), Positives = 123/141 (87%)
Frame = -3
Query: 424 ILGIQIYRDRSKRLLGLSQSIYIDKVLLRFVMQNSKKGFLPMSHGVSLSKTQGPSSREER 245
ILGI+IYR+RSKRL+GLSQS YIDK+L RF MQ SKKGFLPMSHG++L K Q P + +ER
Sbjct: 391 ILGIRIYRERSKRLIGLSQSTYIDKLLKRFNMQYSKKGFLPMSHGINLGKNQCPQATDER 450
Query: 244 DRMDQIPYASAIGSIMYAMLCTRPDVSYALSMTSRYQSDPGESHWIAVKNILKYLRRTKE 65
++M IPYASAIG IMYAMLCTRPDVSYALS TSRYQ DPGESHWIAVKNILKYLRRTK+
Sbjct: 451 NKMSVIPYASAIGCIMYAMLCTRPDVSYALSATSRYQLDPGESHWIAVKNILKYLRRTKD 510
Query: 64 YFLIYGGNDELAVKGYSDASF 2
FL+YGG +EL V GY+DASF
Sbjct: 511 MFLVYGGQEELVVNGYTDASF 531
>emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]
Length = 948
Score = 224 bits (570), Expect = 1e-56
Identities = 109/141 (77%), Positives = 124/141 (87%)
Frame = -3
Query: 424 ILGIQIYRDRSKRLLGLSQSIYIDKVLLRFVMQNSKKGFLPMSHGVSLSKTQGPSSREER 245
ILGI+IYRDRSKRL+GLSQS YIDKVL RF MQ+SKKGFLPMSH ++L K Q P + +ER
Sbjct: 749 ILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHDINLGKNQCPQTTDER 808
Query: 244 DRMDQIPYASAIGSIMYAMLCTRPDVSYALSMTSRYQSDPGESHWIAVKNILKYLRRTKE 65
++M IPYASAIGSIMYAMLCT PDVSYALS T+RYQSDPGESHWIAVKNILKYLRRT++
Sbjct: 809 NKMSVIPYASAIGSIMYAMLCTCPDVSYALSATNRYQSDPGESHWIAVKNILKYLRRTED 868
Query: 64 YFLIYGGNDELAVKGYSDASF 2
FL+YGG +EL V GY+DASF
Sbjct: 869 MFLVYGGQEELVVNGYTDASF 889
>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1248
Score = 221 bits (564), Expect = 6e-56
Identities = 110/141 (78%), Positives = 123/141 (87%)
Frame = -3
Query: 424 ILGIQIYRDRSKRLLGLSQSIYIDKVLLRFVMQNSKKGFLPMSHGVSLSKTQGPSSREER 245
ILGI+IYRDRSKRL+GLSQS YIDKVL RF MQ+SKKGFLPMSHG++L K Q P + +ER
Sbjct: 976 ILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTDER 1035
Query: 244 DRMDQIPYASAIGSIMYAMLCTRPDVSYALSMTSRYQSDPGESHWIAVKNILKYLRRTKE 65
++M IPYASAIGSIMYAMLCTR DVSYALS TSRYQSD GESHWIAVKNILKYLRRTK+
Sbjct: 1036 NKMSVIPYASAIGSIMYAMLCTRLDVSYALSATSRYQSDLGESHWIAVKNILKYLRRTKD 1095
Query: 64 YFLIYGGNDELAVKGYSDASF 2
FL+YG +EL V GY+DASF
Sbjct: 1096 MFLVYGRQEELVVNGYTDASF 1116
>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1161
Score = 221 bits (564), Expect = 6e-56
Identities = 110/141 (78%), Positives = 123/141 (87%)
Frame = -3
Query: 424 ILGIQIYRDRSKRLLGLSQSIYIDKVLLRFVMQNSKKGFLPMSHGVSLSKTQGPSSREER 245
ILGI+IYRDRSKRL+GLSQS YIDKVL RF MQ+SKKGFLPMSHG++L K Q P + +ER
Sbjct: 889 ILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTDER 948
Query: 244 DRMDQIPYASAIGSIMYAMLCTRPDVSYALSMTSRYQSDPGESHWIAVKNILKYLRRTKE 65
++M IPYASAIGSIMYAMLCTR DVSYALS TSRYQSD GESHWIAVKNILKYLRRTK+
Sbjct: 949 NKMSVIPYASAIGSIMYAMLCTRLDVSYALSATSRYQSDLGESHWIAVKNILKYLRRTKD 1008
Query: 64 YFLIYGGNDELAVKGYSDASF 2
FL+YG +EL V GY+DASF
Sbjct: 1009 MFLVYGRQEELVVNGYTDASF 1029
>gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1745
Score = 221 bits (563), Expect = 8e-56
Identities = 109/141 (77%), Positives = 122/141 (86%)
Frame = -3
Query: 424 ILGIQIYRDRSKRLLGLSQSIYIDKVLLRFVMQNSKKGFLPMSHGVSLSKTQGPSSREER 245
I+GI+IYRDRSKRL+GLSQS YIDKVL RF MQ+SKKGFLPMSHG++ K Q P + +ER
Sbjct: 1491 IMGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINHGKNQCPQTTDER 1550
Query: 244 DRMDQIPYASAIGSIMYAMLCTRPDVSYALSMTSRYQSDPGESHWIAVKNILKYLRRTKE 65
++M IPYA AIGSIMYAMLCTR DVSYALS TSRYQSDPGESHWIAVKNILKYLRRTK+
Sbjct: 1551 NKMSVIPYAWAIGSIMYAMLCTRIDVSYALSATSRYQSDPGESHWIAVKNILKYLRRTKD 1610
Query: 64 YFLIYGGNDELAVKGYSDASF 2
FL+YGG +EL V GY DASF
Sbjct: 1611 MFLVYGGQEELVVNGYIDASF 1631
>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
putative retrotransposon protein [Arabidopsis thaliana]
Length = 964
Score = 219 bits (557), Expect = 4e-55
Identities = 105/141 (74%), Positives = 124/141 (87%)
Frame = -3
Query: 424 ILGIQIYRDRSKRLLGLSQSIYIDKVLLRFVMQNSKKGFLPMSHGVSLSKTQGPSSREER 245
ILGI+IYRDR +++GLSQ YIDKVL RF M +SKKGF+PMSHG++LSKTQ PS+ +ER
Sbjct: 674 ILGIRIYRDRLNKIIGLSQDTYIDKVLHRFNMHDSKKGFIPMSHGITLSKTQCPSTHDER 733
Query: 244 DRMDQIPYASAIGSIMYAMLCTRPDVSYALSMTSRYQSDPGESHWIAVKNILKYLRRTKE 65
+RM +IPYASAIGSIMYAML TRPDV+ ALSMTSRYQSDPGESHWI V+NI KYLRRTK+
Sbjct: 734 ERMSKIPYASAIGSIMYAMLYTRPDVACALSMTSRYQSDPGESHWIVVRNIFKYLRRTKD 793
Query: 64 YFLIYGGNDELAVKGYSDASF 2
FL+YGG++EL V GY+DASF
Sbjct: 794 KFLVYGGSEELVVSGYTDASF 814
>gb|AAX96622.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77550175|gb|ABA92972.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 305
Score = 218 bits (554), Expect = 8e-55
Identities = 107/141 (75%), Positives = 121/141 (85%)
Frame = -3
Query: 424 ILGIQIYRDRSKRLLGLSQSIYIDKVLLRFVMQNSKKGFLPMSHGVSLSKTQGPSSREER 245
ILGI+IYRDRSKRL+GL QS YIDKVL RF MQ+SKKGFLPMSH ++L K Q + +ER
Sbjct: 10 ILGIRIYRDRSKRLIGLRQSTYIDKVLKRFNMQDSKKGFLPMSHDINLGKNQCSQTTDER 69
Query: 244 DRMDQIPYASAIGSIMYAMLCTRPDVSYALSMTSRYQSDPGESHWIAVKNILKYLRRTKE 65
++M IPYASAIGSIMYAMLCTRPDVSYALS TSRYQSDPGE+HWIAVKNILKYL RTK+
Sbjct: 70 NKMSVIPYASAIGSIMYAMLCTRPDVSYALSATSRYQSDPGETHWIAVKNILKYLIRTKD 129
Query: 64 YFLIYGGNDELAVKGYSDASF 2
FL+YGG +EL V Y+DASF
Sbjct: 130 MFLVYGGQEELVVNDYTDASF 150
>gb|ABF97078.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 649
Score = 218 bits (554), Expect = 8e-55
Identities = 107/144 (74%), Positives = 122/144 (84%), Gaps = 3/144 (2%)
Frame = -3
Query: 424 ILGIQIYRDRSKRLLGLSQSIYIDKVLLRFVMQNSKKGFLPMSHGVSLSKTQGPSSREER 245
ILGI+IYRDRSKRL+GLSQS YIDKVL RF MQ+SKKGFLPMSHG++L K Q P + +ER
Sbjct: 404 ILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTDER 463
Query: 244 DRMDQIPYASAIGSIMYAMLCTRPDVSYALSMTSRYQS---DPGESHWIAVKNILKYLRR 74
++M IPYASAIGSI+Y MLCTRPDVSYALS TSRYQ PGESHWI VKNILKYLRR
Sbjct: 464 NKMSVIPYASAIGSIVYGMLCTRPDVSYALSATSRYQGYVPSPGESHWIVVKNILKYLRR 523
Query: 73 TKEYFLIYGGNDELAVKGYSDASF 2
TK+ FL+YGG +E+ V GY+DASF
Sbjct: 524 TKDMFLVYGGQEEIVVNGYTDASF 547
>gb|AAK52163.1|AC084831_17 putative polyprotein [Oryza sativa Japonica Group]
Length = 637
Score = 218 bits (554), Expect = 8e-55
Identities = 107/144 (74%), Positives = 122/144 (84%), Gaps = 3/144 (2%)
Frame = -3
Query: 424 ILGIQIYRDRSKRLLGLSQSIYIDKVLLRFVMQNSKKGFLPMSHGVSLSKTQGPSSREER 245
ILGI+IYRDRSKRL+GLSQS YIDKVL RF MQ+SKKGFLPMSHG++L K Q P + +ER
Sbjct: 392 ILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTDER 451
Query: 244 DRMDQIPYASAIGSIMYAMLCTRPDVSYALSMTSRYQS---DPGESHWIAVKNILKYLRR 74
++M IPYASAIGSI+Y MLCTRPDVSYALS TSRYQ PGESHWI VKNILKYLRR
Sbjct: 452 NKMSVIPYASAIGSIVYGMLCTRPDVSYALSATSRYQGYVPSPGESHWIVVKNILKYLRR 511
Query: 73 TKEYFLIYGGNDELAVKGYSDASF 2
TK+ FL+YGG +E+ V GY+DASF
Sbjct: 512 TKDMFLVYGGQEEIVVNGYTDASF 535
>gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1142
Score = 216 bits (551), Expect = 2e-54
Identities = 106/141 (75%), Positives = 121/141 (85%)
Frame = -3
Query: 424 ILGIQIYRDRSKRLLGLSQSIYIDKVLLRFVMQNSKKGFLPMSHGVSLSKTQGPSSREER 245
ILGI+IYRD SKRL+GLS+S YIDKVL F MQ+SKKGFLPMSHG++L+K Q + E+
Sbjct: 950 ILGIRIYRDGSKRLIGLSESTYIDKVLKMFNMQDSKKGFLPMSHGINLNKNQCLQTTNEQ 1009
Query: 244 DRMDQIPYASAIGSIMYAMLCTRPDVSYALSMTSRYQSDPGESHWIAVKNILKYLRRTKE 65
++M IPYASAIGSIMYAMLCTRPDVSY LS TSRYQSDP ESHWIAVKNILKYLRRTK+
Sbjct: 1010 NKMSVIPYASAIGSIMYAMLCTRPDVSYVLSATSRYQSDPSESHWIAVKNILKYLRRTKD 1069
Query: 64 YFLIYGGNDELAVKGYSDASF 2
FL+YGG +EL V GY+DASF
Sbjct: 1070 MFLVYGGQEELVVNGYTDASF 1090
>gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1084
Score = 216 bits (551), Expect = 2e-54
Identities = 106/141 (75%), Positives = 121/141 (85%)
Frame = -3
Query: 424 ILGIQIYRDRSKRLLGLSQSIYIDKVLLRFVMQNSKKGFLPMSHGVSLSKTQGPSSREER 245
ILGI+IYRD SKRL+GLS+S YIDKVL F MQ+SKKGFLPMSHG++L+K Q + E+
Sbjct: 892 ILGIRIYRDGSKRLIGLSESTYIDKVLKMFNMQDSKKGFLPMSHGINLNKNQCLQTTNEQ 951
Query: 244 DRMDQIPYASAIGSIMYAMLCTRPDVSYALSMTSRYQSDPGESHWIAVKNILKYLRRTKE 65
++M IPYASAIGSIMYAMLCTRPDVSY LS TSRYQSDP ESHWIAVKNILKYLRRTK+
Sbjct: 952 NKMSVIPYASAIGSIMYAMLCTRPDVSYVLSATSRYQSDPSESHWIAVKNILKYLRRTKD 1011
Query: 64 YFLIYGGNDELAVKGYSDASF 2
FL+YGG +EL V GY+DASF
Sbjct: 1012 MFLVYGGQEELVVNGYTDASF 1032
>gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 932
Score = 216 bits (550), Expect = 2e-54
Identities = 107/141 (75%), Positives = 122/141 (86%)
Frame = -3
Query: 424 ILGIQIYRDRSKRLLGLSQSIYIDKVLLRFVMQNSKKGFLPMSHGVSLSKTQGPSSREER 245
IL I+IYRDRS+RL+G SQS YIDKVL RF MQ+SKKGFLP+SHG++L K Q P + +ER
Sbjct: 652 ILSIRIYRDRSRRLIG-SQSTYIDKVLKRFNMQDSKKGFLPLSHGINLGKNQCPQTTDER 710
Query: 244 DRMDQIPYASAIGSIMYAMLCTRPDVSYALSMTSRYQSDPGESHWIAVKNILKYLRRTKE 65
++M IPYASAIGSIMYAMLCTRPDV YALS TS+YQSDPGESHWIAVKNILKYLRRTK+
Sbjct: 711 NKMSVIPYASAIGSIMYAMLCTRPDVPYALSATSQYQSDPGESHWIAVKNILKYLRRTKD 770
Query: 64 YFLIYGGNDELAVKGYSDASF 2
FLIYGG +EL V Y+DASF
Sbjct: 771 MFLIYGGQEELVVNNYTDASF 791