BLASTX nr result
ID: Zingiber23_contig00041359
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00041359
(252 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABJ96383.1| hypothetical protein [Prunus persica] 106 3e-21
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa] 104 1e-20
emb|CAE04384.1| OSJNBa0027G07.26 [Oryza sativa Japonica Group] 103 2e-20
ref|XP_003560741.1| PREDICTED: uncharacterized protein LOC100824... 102 4e-20
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc... 102 7e-20
gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sa... 102 7e-20
gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subc... 101 9e-20
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group... 101 9e-20
gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subc... 101 1e-19
ref|XP_006493639.1| PREDICTED: LRR receptor-like serine/threonin... 100 2e-19
ref|XP_003560110.1| PREDICTED: uncharacterized protein LOC100846... 100 2e-19
ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group] g... 100 3e-19
gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sat... 100 3e-19
gb|EEC76475.1| hypothetical protein OsI_14210 [Oryza sativa Indi... 100 3e-19
gb|AAR88589.1| putative copia-like retrotransposon protein [Oryz... 100 3e-19
gb|ABA94310.1| retrotransposon protein, putative, Ty3-gypsy subc... 99 6e-19
gb|AAD22155.1|AF061282_8 polyprotein [Sorghum bicolor] 99 6e-19
ref|XP_004971463.1| PREDICTED: uncharacterized mitochondrial pro... 99 8e-19
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop... 99 8e-19
gb|ABF95616.1| retrotransposon protein, putative, Ty1-copia subc... 99 8e-19
>gb|ABJ96383.1| hypothetical protein [Prunus persica]
Length = 193
Score = 106 bits (265), Expect = 3e-21
Identities = 47/75 (62%), Positives = 60/75 (80%)
Frame = -1
Query: 228 IWCDNIGATYLTTNPIFHARTKHVEIDFHFVRERVATQQLSVSYISAEDQIDDIFTKPLS 49
+WCDN+GATYL+ NPIFHARTKHVEID+HFVR++V+ +LSV +IS +DQ+ DI TKPLS
Sbjct: 116 LWCDNLGATYLSANPIFHARTKHVEIDYHFVRDQVSAGKLSVQFISTKDQLADIMTKPLS 175
Query: 48 RQRFNKLASKLNVRD 4
RF + KL V +
Sbjct: 176 SPRFTFIRDKLRVHE 190
>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
Length = 1384
Score = 104 bits (259), Expect = 1e-20
Identities = 46/75 (61%), Positives = 60/75 (80%)
Frame = -1
Query: 231 KIWCDNIGATYLTTNPIFHARTKHVEIDFHFVRERVATQQLSVSYISAEDQIDDIFTKPL 52
+IWCDNI + L +NP+FH+RTKH+E+D+H+VR++V Q+L+VSY+S DQ DIFTK L
Sbjct: 1292 RIWCDNISSISLASNPVFHSRTKHIEVDYHYVRDKVVRQELAVSYVSTADQTADIFTKGL 1351
Query: 51 SRQRFNKLASKLNVR 7
S QRF LASKL VR
Sbjct: 1352 STQRFQFLASKLPVR 1366
>emb|CAE04384.1| OSJNBa0027G07.26 [Oryza sativa Japonica Group]
Length = 243
Score = 103 bits (257), Expect = 2e-20
Identities = 45/79 (56%), Positives = 60/79 (75%)
Frame = -1
Query: 237 ALKIWCDNIGATYLTTNPIFHARTKHVEIDFHFVRERVATQQLSVSYISAEDQIDDIFTK 58
A K+WCDNIGA YL+ NP+FHARTKH+E+D+HFVRERV+ + L + YIS++DQ+ D FTK
Sbjct: 164 AAKMWCDNIGAKYLSANPVFHARTKHIEVDYHFVRERVSRRLLEIEYISSKDQVADGFTK 223
Query: 57 PLSRQRFNKLASKLNVRDL 1
L+ + F S LN+ L
Sbjct: 224 ALAVRPFEDFKSNLNITSL 242
>ref|XP_003560741.1| PREDICTED: uncharacterized protein LOC100824035 [Brachypodium
distachyon]
Length = 270
Score = 102 bits (255), Expect = 4e-20
Identities = 43/64 (67%), Positives = 56/64 (87%)
Frame = -1
Query: 228 IWCDNIGATYLTTNPIFHARTKHVEIDFHFVRERVATQQLSVSYISAEDQIDDIFTKPLS 49
+WCDNIGATYL++NP+FHARTKH+E+D+HFVRERVA + L + +IS++DQ+ DIFTKPLS
Sbjct: 82 LWCDNIGATYLSSNPVFHARTKHIEVDYHFVRERVAQKLLQIKFISSKDQLADIFTKPLS 141
Query: 48 RQRF 37
F
Sbjct: 142 LPLF 145
>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1460
Score = 102 bits (253), Expect = 7e-20
Identities = 44/81 (54%), Positives = 59/81 (72%)
Frame = -1
Query: 252 LASDIALKIWCDNIGATYLTTNPIFHARTKHVEIDFHFVRERVATQQLSVSYISAEDQID 73
+ S A KIWCDN+GA YL+ NP+FHARTKH+E+D+HFVRERV+ + L + ++S DQ+
Sbjct: 1370 IKSPKAAKIWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSQKLLEIDFVSTNDQVA 1429
Query: 72 DIFTKPLSRQRFNKLASKLNV 10
D FTKPLS + S LN+
Sbjct: 1430 DGFTKPLSVRLLENFKSNLNL 1450
>gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|31433472|gb|AAP54977.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1031
Score = 102 bits (253), Expect = 7e-20
Identities = 44/74 (59%), Positives = 57/74 (77%)
Frame = -1
Query: 231 KIWCDNIGATYLTTNPIFHARTKHVEIDFHFVRERVATQQLSVSYISAEDQIDDIFTKPL 52
K+WCDNIGA Y+T NP+FHARTKH+E+D+HFVRERVA + L V YIS +DQ+ D FTK L
Sbjct: 954 KVWCDNIGAKYMTANPVFHARTKHIEVDYHFVRERVARKLLQVEYISTKDQVADGFTKTL 1013
Query: 51 SRQRFNKLASKLNV 10
S ++ + LN+
Sbjct: 1014 SVRQLEMFRNNLNL 1027
>gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 900
Score = 101 bits (252), Expect = 9e-20
Identities = 41/76 (53%), Positives = 60/76 (78%)
Frame = -1
Query: 237 ALKIWCDNIGATYLTTNPIFHARTKHVEIDFHFVRERVATQQLSVSYISAEDQIDDIFTK 58
A ++WCDN+GATY+T NP+FHARTKH+E+D+HFVRE+VA + L + ++S++DQ+ D FTK
Sbjct: 823 AARLWCDNLGATYMTANPVFHARTKHIEVDYHFVREQVAQKLLDIHFVSSQDQVADGFTK 882
Query: 57 PLSRQRFNKLASKLNV 10
P+S Q+ LN+
Sbjct: 883 PISLQQLIGFRHNLNL 898
>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1431
Score = 101 bits (252), Expect = 9e-20
Identities = 44/74 (59%), Positives = 57/74 (77%)
Frame = -1
Query: 231 KIWCDNIGATYLTTNPIFHARTKHVEIDFHFVRERVATQQLSVSYISAEDQIDDIFTKPL 52
K+WCDNIGA Y+T NP+FHARTKH+E+D+HFVRERVA + L V YIS +DQ+ D FTK L
Sbjct: 1354 KVWCDNIGAKYMTANPVFHARTKHIEVDYHFVRERVARKFLQVEYISTKDQVADGFTKTL 1413
Query: 51 SRQRFNKLASKLNV 10
S ++ + LN+
Sbjct: 1414 SVRQLEMFRNNLNL 1427
>gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2074
Score = 101 bits (251), Expect = 1e-19
Identities = 44/76 (57%), Positives = 56/76 (73%)
Frame = -1
Query: 228 IWCDNIGATYLTTNPIFHARTKHVEIDFHFVRERVATQQLSVSYISAEDQIDDIFTKPLS 49
+WCDN+GATYL NP+FHARTKH+EID+HFVRERVA +QL + +IS+ DQ+ D FTKPL
Sbjct: 1999 MWCDNLGATYLAVNPVFHARTKHIEIDYHFVRERVARKQLEIKFISSGDQVADGFTKPLG 2058
Query: 48 RQRFNKLASKLNVRDL 1
+ LN+ L
Sbjct: 2059 APQLRNFRYNLNLDKL 2074
>ref|XP_006493639.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
GSO1-like [Citrus sinensis]
Length = 1668
Score = 100 bits (249), Expect = 2e-19
Identities = 44/73 (60%), Positives = 55/73 (75%)
Frame = -1
Query: 228 IWCDNIGATYLTTNPIFHARTKHVEIDFHFVRERVATQQLSVSYISAEDQIDDIFTKPLS 49
IWCDNI AT L NP+FH+RTKH+EID HF+R++V + L + Y+ +EDQI DI TKPLS
Sbjct: 405 IWCDNISATELAKNPVFHSRTKHIEIDVHFIRDKVLSGDLKICYVPSEDQIADILTKPLS 464
Query: 48 RQRFNKLASKLNV 10
+FN L KLNV
Sbjct: 465 SPQFNYLRDKLNV 477
>ref|XP_003560110.1| PREDICTED: uncharacterized protein LOC100846463 [Brachypodium
distachyon]
Length = 989
Score = 100 bits (249), Expect = 2e-19
Identities = 43/73 (58%), Positives = 57/73 (78%)
Frame = -1
Query: 228 IWCDNIGATYLTTNPIFHARTKHVEIDFHFVRERVATQQLSVSYISAEDQIDDIFTKPLS 49
+WCDNIGATYL+ NP+FHARTKH+EIDFHFVRE+VA L V IS DQ+ D+FTKP +
Sbjct: 911 LWCDNIGATYLSANPVFHARTKHIEIDFHFVREKVALGALDVRSISTADQLADVFTKPAT 970
Query: 48 RQRFNKLASKLNV 10
+ ++ ++ LN+
Sbjct: 971 QLTLHRFSTNLNL 983
>ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group]
gi|255678617|dbj|BAH94406.1| Os08g0544300 [Oryza sativa
Japonica Group]
Length = 821
Score = 100 bits (248), Expect = 3e-19
Identities = 43/76 (56%), Positives = 58/76 (76%)
Frame = -1
Query: 237 ALKIWCDNIGATYLTTNPIFHARTKHVEIDFHFVRERVATQQLSVSYISAEDQIDDIFTK 58
A K+WCDN+GA YL+ NPIFHARTKH+E+DFHFVRERVA + L ++YIS +DQ+ D FTK
Sbjct: 737 AAKLWCDNLGAKYLSANPIFHARTKHIEVDFHFVRERVARKLLEIAYISTKDQVADGFTK 796
Query: 57 PLSRQRFNKLASKLNV 10
+ ++ + LN+
Sbjct: 797 AIPVRQMEMFKNNLNL 812
>gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sativa]
gi|31430072|gb|AAP52036.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1058
Score = 100 bits (248), Expect = 3e-19
Identities = 42/77 (54%), Positives = 61/77 (79%)
Frame = -1
Query: 231 KIWCDNIGATYLTTNPIFHARTKHVEIDFHFVRERVATQQLSVSYISAEDQIDDIFTKPL 52
++WCDNIGATYL+ NP+FHARTKH+EID+HFVRE+VA +QL++ ++ ++DQ+ D FTK L
Sbjct: 975 QLWCDNIGATYLSVNPVFHARTKHIEIDYHFVREQVAQKQLALQFVPSQDQVADGFTKAL 1034
Query: 51 SRQRFNKLASKLNVRDL 1
++ + LN+ DL
Sbjct: 1035 PVRQLQMFRNNLNLVDL 1051
>gb|EEC76475.1| hypothetical protein OsI_14210 [Oryza sativa Indica Group]
Length = 391
Score = 100 bits (248), Expect = 3e-19
Identities = 43/76 (56%), Positives = 58/76 (76%)
Frame = -1
Query: 237 ALKIWCDNIGATYLTTNPIFHARTKHVEIDFHFVRERVATQQLSVSYISAEDQIDDIFTK 58
A K+WCDN+GA YL+ NPIFHARTKH+E+DFHFVRERVA + L ++YIS +DQ+ D FTK
Sbjct: 307 AAKLWCDNLGAKYLSANPIFHARTKHIEVDFHFVRERVARKLLEIAYISTKDQVADGFTK 366
Query: 57 PLSRQRFNKLASKLNV 10
+ ++ + LN+
Sbjct: 367 AIPVRQMEMFKNNLNL 382
>gb|AAR88589.1| putative copia-like retrotransposon protein [Oryza sativa Japonica
Group]
Length = 1399
Score = 100 bits (248), Expect = 3e-19
Identities = 43/76 (56%), Positives = 58/76 (76%)
Frame = -1
Query: 237 ALKIWCDNIGATYLTTNPIFHARTKHVEIDFHFVRERVATQQLSVSYISAEDQIDDIFTK 58
A K+WCDN+GA YL+ NPIFHARTKH+E+DFHFVRERVA + L ++YIS +DQ+ D FTK
Sbjct: 1315 AAKLWCDNLGAKYLSANPIFHARTKHIEVDFHFVRERVARKLLEIAYISTKDQVADGFTK 1374
Query: 57 PLSRQRFNKLASKLNV 10
+ ++ + LN+
Sbjct: 1375 AIPVRQMEMFKNNLNL 1390
>gb|ABA94310.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1762
Score = 99.0 bits (245), Expect = 6e-19
Identities = 43/76 (56%), Positives = 56/76 (73%)
Frame = -1
Query: 228 IWCDNIGATYLTTNPIFHARTKHVEIDFHFVRERVATQQLSVSYISAEDQIDDIFTKPLS 49
+WCDN+GATYL++NP+FHARTKH+EID+HFV+ERVA + L + +I +DQI D FTK LS
Sbjct: 1687 LWCDNLGATYLSSNPVFHARTKHIEIDYHFVQERVANKMLDIRFIGTKDQIADGFTKALS 1746
Query: 48 RQRFNKLASKLNVRDL 1
Q LN+ L
Sbjct: 1747 TQNLRHFMYNLNLAKL 1762
>gb|AAD22155.1|AF061282_8 polyprotein [Sorghum bicolor]
Length = 1012
Score = 99.0 bits (245), Expect = 6e-19
Identities = 45/75 (60%), Positives = 56/75 (74%)
Frame = -1
Query: 231 KIWCDNIGATYLTTNPIFHARTKHVEIDFHFVRERVATQQLSVSYISAEDQIDDIFTKPL 52
++WCDN+GATYL+ NPIFHARTKH+EIDFHFVRERVA + L V +IS DQ+ D FTK L
Sbjct: 936 RLWCDNLGATYLSANPIFHARTKHIEIDFHFVRERVAQKLLEVRFISTGDQLADGFTKAL 995
Query: 51 SRQRFNKLASKLNVR 7
+ K LN++
Sbjct: 996 PVIKLKKFRDNLNLQ 1010
>ref|XP_004971463.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Setaria italica]
Length = 357
Score = 98.6 bits (244), Expect = 8e-19
Identities = 44/73 (60%), Positives = 55/73 (75%)
Frame = -1
Query: 228 IWCDNIGATYLTTNPIFHARTKHVEIDFHFVRERVATQQLSVSYISAEDQIDDIFTKPLS 49
+WCDNIGATYL+TNP+FHARTKH+E+D+HFVRERVA +QL V IS+ DQ+ D FTK +
Sbjct: 282 LWCDNIGATYLSTNPVFHARTKHIEVDYHFVRERVAKKQLDVRIISSHDQVADGFTKSIP 341
Query: 48 RQRFNKLASKLNV 10
+ LNV
Sbjct: 342 VHHLVEFHRNLNV 354
>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
Length = 1313
Score = 98.6 bits (244), Expect = 8e-19
Identities = 44/84 (52%), Positives = 58/84 (69%)
Frame = -1
Query: 252 LASDIALKIWCDNIGATYLTTNPIFHARTKHVEIDFHFVRERVATQQLSVSYISAEDQID 73
+ S A K+WCDN+GA YL+ NPIFHARTKH+E+D+HFVR+RVA + L + Y+ DQ+
Sbjct: 1230 IKSPRAAKLWCDNLGAKYLSANPIFHARTKHIEVDYHFVRDRVAKKLLDIEYVPTGDQVA 1289
Query: 72 DIFTKPLSRQRFNKLASKLNVRDL 1
D FTKPLS + LN+ L
Sbjct: 1290 DGFTKPLSVRLLENFKVNLNLTRL 1313
>gb|ABF95616.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1241
Score = 98.6 bits (244), Expect = 8e-19
Identities = 42/76 (55%), Positives = 57/76 (75%)
Frame = -1
Query: 237 ALKIWCDNIGATYLTTNPIFHARTKHVEIDFHFVRERVATQQLSVSYISAEDQIDDIFTK 58
A K+WCDN+GA YL+ NPIFHARTKH+E+DFHFVRERVA + L ++YIS +DQ+ D FTK
Sbjct: 1157 AAKLWCDNLGAKYLSANPIFHARTKHIEVDFHFVRERVARKLLEIAYISTKDQVADGFTK 1216
Query: 57 PLSRQRFNKLASKLNV 10
+ ++ + N+
Sbjct: 1217 AIPVRQMEMFKNNFNL 1232