BLASTX nr result
ID: Zingiber23_contig00041048
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00041048
(225 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004973475.1| PREDICTED: DNA repair protein complementing ... 68 1e-09
ref|NP_001061843.1| Os08g0427500 [Oryza sativa Japonica Group] g... 67 3e-09
gb|EEE68722.1| hypothetical protein OsJ_27387 [Oryza sativa Japo... 67 3e-09
ref|XP_002444371.1| hypothetical protein SORBIDRAFT_07g020840 [S... 65 7e-09
tpg|DAA49047.1| TPA: hypothetical protein ZEAMMB73_271163 [Zea m... 65 1e-08
gb|EMT23362.1| DNA repair complementing XP-C cells-like protein ... 65 1e-08
gb|EMS61539.1| DNA repair protein complementing XP-C cells-like ... 65 1e-08
ref|XP_006660145.1| PREDICTED: DNA repair protein complementing ... 64 2e-08
ref|XP_003572211.1| PREDICTED: DNA repair protein complementing ... 64 3e-08
ref|XP_002305874.2| hypothetical protein POPTR_0004s08580g [Popu... 58 2e-06
gb|EOY03915.1| DNA repair protein xp-C / rad4, putative isoform ... 56 4e-06
gb|EOY03914.1| DNA repair protein xp-C / rad4, putative isoform ... 56 4e-06
gb|EXC20633.1| DNA repair protein complementing XP-C cell [Morus... 55 8e-06
gb|EMJ18890.1| hypothetical protein PRUPE_ppa001034mg [Prunus pe... 55 8e-06
ref|XP_006826912.1| hypothetical protein AMTR_s00010p00163020 [A... 55 1e-05
>ref|XP_004973475.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
[Setaria italica]
Length = 863
Score = 67.8 bits (164), Expect = 1e-09
Identities = 29/35 (82%), Positives = 32/35 (91%)
Frame = +2
Query: 53 DHVHVYPPENQSFDEETMVRTKRCPCGFSIEVEEL 157
+HVH YP E+QSFDEET VRTKRCPCGFSI+VEEL
Sbjct: 829 EHVHEYPEEDQSFDEETFVRTKRCPCGFSIQVEEL 863
>ref|NP_001061843.1| Os08g0427500 [Oryza sativa Japonica Group]
gi|38175490|dbj|BAD01186.1| putative xeroderma
pigmentosum group C protein [Oryza sativa Japonica
Group] gi|38175770|dbj|BAD01464.1| putative xeroderma
pigmentosum group C protein [Oryza sativa Japonica
Group] gi|113623812|dbj|BAF23757.1| Os08g0427500 [Oryza
sativa Japonica Group]
Length = 880
Score = 67.0 bits (162), Expect = 3e-09
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = +2
Query: 53 DHVHVYPPENQSFDEETMVRTKRCPCGFSIEVEEL 157
DH H YP E+QSFDEET VRTKRCPCGFSI+VEEL
Sbjct: 846 DHEHEYPEEDQSFDEETFVRTKRCPCGFSIQVEEL 880
>gb|EEE68722.1| hypothetical protein OsJ_27387 [Oryza sativa Japonica Group]
Length = 696
Score = 67.0 bits (162), Expect = 3e-09
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = +2
Query: 53 DHVHVYPPENQSFDEETMVRTKRCPCGFSIEVEEL 157
DH H YP E+QSFDEET VRTKRCPCGFSI+VEEL
Sbjct: 662 DHEHEYPEEDQSFDEETFVRTKRCPCGFSIQVEEL 696
>ref|XP_002444371.1| hypothetical protein SORBIDRAFT_07g020840 [Sorghum bicolor]
gi|241940721|gb|EES13866.1| hypothetical protein
SORBIDRAFT_07g020840 [Sorghum bicolor]
Length = 860
Score = 65.5 bits (158), Expect = 7e-09
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = +2
Query: 53 DHVHVYPPENQSFDEETMVRTKRCPCGFSIEVEEL 157
DH H +P E+QSFDEET VRTKRCPCGFSI+VEEL
Sbjct: 826 DHEHEFPEEDQSFDEETFVRTKRCPCGFSIQVEEL 860
>tpg|DAA49047.1| TPA: hypothetical protein ZEAMMB73_271163 [Zea mays]
Length = 549
Score = 65.1 bits (157), Expect = 1e-08
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = +2
Query: 53 DHVHVYPPENQSFDEETMVRTKRCPCGFSIEVEEL 157
DH H +P E+QSFDEET VRTKRCPCGFSI+VEEL
Sbjct: 515 DHDHEFPKEDQSFDEETFVRTKRCPCGFSIQVEEL 549
>gb|EMT23362.1| DNA repair complementing XP-C cells-like protein [Aegilops tauschii]
Length = 959
Score = 64.7 bits (156), Expect = 1e-08
Identities = 27/35 (77%), Positives = 31/35 (88%)
Frame = +2
Query: 53 DHVHVYPPENQSFDEETMVRTKRCPCGFSIEVEEL 157
DH H +P E+QSFDEET VRTKRCPCGFS++VEEL
Sbjct: 925 DHEHEFPEEDQSFDEETFVRTKRCPCGFSLQVEEL 959
>gb|EMS61539.1| DNA repair protein complementing XP-C cells-like protein [Triticum
urartu]
Length = 895
Score = 64.7 bits (156), Expect = 1e-08
Identities = 27/35 (77%), Positives = 31/35 (88%)
Frame = +2
Query: 53 DHVHVYPPENQSFDEETMVRTKRCPCGFSIEVEEL 157
DH H +P E+QSFDEET VRTKRCPCGFS++VEEL
Sbjct: 861 DHEHEFPEEDQSFDEETFVRTKRCPCGFSLQVEEL 895
>ref|XP_006660145.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
[Oryza brachyantha]
Length = 875
Score = 63.9 bits (154), Expect = 2e-08
Identities = 27/35 (77%), Positives = 31/35 (88%)
Frame = +2
Query: 53 DHVHVYPPENQSFDEETMVRTKRCPCGFSIEVEEL 157
+H H +P E+QSFDEET VRTKRCPCGFSI+VEEL
Sbjct: 841 EHEHEFPEEDQSFDEETFVRTKRCPCGFSIQVEEL 875
>ref|XP_003572211.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
[Brachypodium distachyon]
Length = 889
Score = 63.5 bits (153), Expect = 3e-08
Identities = 27/40 (67%), Positives = 31/40 (77%)
Frame = +2
Query: 38 SLVPSDHVHVYPPENQSFDEETMVRTKRCPCGFSIEVEEL 157
S DH H +P E+QSFDEET VRTKRCPCGF I+VEE+
Sbjct: 850 SFAADDHEHEFPEEDQSFDEETFVRTKRCPCGFVIQVEEM 889
>ref|XP_002305874.2| hypothetical protein POPTR_0004s08580g [Populus trichocarpa]
gi|550340612|gb|EEE86385.2| hypothetical protein
POPTR_0004s08580g [Populus trichocarpa]
Length = 898
Score = 57.8 bits (138), Expect = 2e-06
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = +2
Query: 53 DHVHVYPPENQSFDEETMVRTKRCPCGFSIEVEEL 157
DH HV+ E+QSFDEET RTKRC CGFS++VEEL
Sbjct: 864 DHEHVFLVEDQSFDEETSTRTKRCHCGFSVQVEEL 898
>gb|EOY03915.1| DNA repair protein xp-C / rad4, putative isoform 2 [Theobroma
cacao]
Length = 908
Score = 56.2 bits (134), Expect = 4e-06
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = +2
Query: 53 DHVHVYPPENQSFDEETMVRTKRCPCGFSIEVEEL 157
DH HV+ EN+SFD E VRTKRC CGFSI+VEEL
Sbjct: 874 DHEHVFLRENESFDAENSVRTKRCHCGFSIQVEEL 908
>gb|EOY03914.1| DNA repair protein xp-C / rad4, putative isoform 1 [Theobroma cacao]
Length = 974
Score = 56.2 bits (134), Expect = 4e-06
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = +2
Query: 53 DHVHVYPPENQSFDEETMVRTKRCPCGFSIEVEEL 157
DH HV+ EN+SFD E VRTKRC CGFSI+VEEL
Sbjct: 940 DHEHVFLRENESFDAENSVRTKRCHCGFSIQVEEL 974
>gb|EXC20633.1| DNA repair protein complementing XP-C cell [Morus notabilis]
Length = 962
Score = 55.5 bits (132), Expect = 8e-06
Identities = 22/35 (62%), Positives = 30/35 (85%)
Frame = +2
Query: 53 DHVHVYPPENQSFDEETMVRTKRCPCGFSIEVEEL 157
DH H++ E+QSFD+ET++ TKRC CGFS++VEEL
Sbjct: 928 DHKHLFLTEDQSFDDETLILTKRCHCGFSVQVEEL 962
>gb|EMJ18890.1| hypothetical protein PRUPE_ppa001034mg [Prunus persica]
Length = 927
Score = 55.5 bits (132), Expect = 8e-06
Identities = 22/38 (57%), Positives = 31/38 (81%)
Frame = +2
Query: 44 VPSDHVHVYPPENQSFDEETMVRTKRCPCGFSIEVEEL 157
+P +H HV+ ENQSFDE+ +V T+RC CGF+++VEEL
Sbjct: 890 MPENHEHVFLTENQSFDEDNLVVTRRCHCGFTVQVEEL 927
>ref|XP_006826912.1| hypothetical protein AMTR_s00010p00163020 [Amborella trichopoda]
gi|548831341|gb|ERM94149.1| hypothetical protein
AMTR_s00010p00163020 [Amborella trichopoda]
Length = 918
Score = 55.1 bits (131), Expect = 1e-05
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = +2
Query: 53 DHVHVYPPENQSFDEETMVRTKRCPCGFSIEVEEL 157
+H H +P EN+S+D E+ VRTKRC CGFSI+VEEL
Sbjct: 884 EHEHSFPLENESYDGESCVRTKRCACGFSIQVEEL 918