BLASTX nr result

ID: Zingiber23_contig00040852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00040852
         (271 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303019.1| hypothetical protein POPTR_0002s24000g [Popu...    42   8e-06

>ref|XP_002303019.1| hypothetical protein POPTR_0002s24000g [Populus trichocarpa]
           gi|222844745|gb|EEE82292.1| hypothetical protein
           POPTR_0002s24000g [Populus trichocarpa]
          Length = 181

 Score = 42.0 bits (97), Expect(2) = 8e-06
 Identities = 20/35 (57%), Positives = 26/35 (74%), Gaps = 2/35 (5%)
 Frame = +2

Query: 74  LLVSSTAAYDGGDA--YDVLRSHGLPIGLLPKGVQ 172
           L++S T  Y   +   YDVL++HGLPIGLLPKGV+
Sbjct: 11  LVISITTVYSDQEKSIYDVLKAHGLPIGLLPKGVK 45



 Score = 33.1 bits (74), Expect(2) = 8e-06
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +3

Query: 174 EFPINADGRFQARLPSPCTAKFDGEVLYNATV 269
           EF I+  GRF+  L   C AKF+ E+ Y+  V
Sbjct: 46  EFKIDETGRFEVHLDQACNAKFESELHYDMNV 77


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