BLASTX nr result
ID: Zingiber23_contig00040775
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00040775
(690 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004309618.1| PREDICTED: uncharacterized protein LOC101306... 50 3e-08
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera] 49 4e-08
emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera] 49 3e-07
emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera] 47 4e-07
emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera] 44 7e-07
emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis ... 44 9e-07
emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera] 44 1e-06
emb|CAN63683.1| hypothetical protein VITISV_030301 [Vitis vinifera] 44 2e-06
emb|CAN83304.1| hypothetical protein VITISV_008191 [Vitis vinifera] 45 2e-06
emb|CAN75700.1| hypothetical protein VITISV_035987 [Vitis vinifera] 57 4e-06
emb|CAN74166.1| hypothetical protein VITISV_007721 [Vitis vinifera] 57 4e-06
emb|CAN73349.1| hypothetical protein VITISV_009748 [Vitis vinifera] 57 5e-06
emb|CBI31290.3| unnamed protein product [Vitis vinifera] 43 6e-06
ref|XP_004301329.1| PREDICTED: uncharacterized protein LOC101296... 42 1e-05
>ref|XP_004309618.1| PREDICTED: uncharacterized protein LOC101306292 [Fragaria vesca
subsp. vesca]
Length = 232
Score = 50.1 bits (118), Expect(2) = 3e-08
Identities = 25/56 (44%), Positives = 34/56 (60%)
Frame = -3
Query: 172 DSGATHHVTLEYNILIEASPYDGPDMVQIGNDSGL*ITHIGNTSFYSCDRTFRMHN 5
D+GATHH+T + L A PYD + + IGN GL I HIG+T TF+++N
Sbjct: 142 DTGATHHMTSDLRNLAIAHPYDSSNSITIGNGEGLSIKHIGSTEI--TPHTFQLNN 195
Score = 34.7 bits (78), Expect(2) = 3e-08
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
Frame = -1
Query: 498 CQTCHIVGHTGIHCSRRFDWSYSQTKCQICLRTGHIRIQCSKRFDSNFAGGPAALRQPTI 319
CQ C+ GHT I+C R + S S CQI G+ + C R + F G +
Sbjct: 63 CQLCNKRGHTAINCPSRNEGS-SVFVCQIYGLKGYTALDCPHRSNYAFQGSNPPATITAM 121
Query: 318 S*GEHASSN---RPPPSWHSTAQSSH 250
S H +S+ P W ++H
Sbjct: 122 SAHTHGASSSGVSPNEVWIRDTGATH 147
>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
Length = 1432
Score = 48.9 bits (115), Expect(2) = 4e-08
Identities = 24/54 (44%), Positives = 32/54 (59%)
Frame = -3
Query: 172 DSGATHHVTLEYNILIEASPYDGPDMVQIGNDSGL*ITHIGNTSFYSCDRTFRM 11
DSGA+HH+T L SPY G D V IGN L I++IG+ +S +FR+
Sbjct: 348 DSGASHHLTQNLGNLTSTSPYTGTDKVTIGNGKHLSISNIGSKQLHSHTHSFRL 401
Score = 35.0 bits (79), Expect(2) = 4e-08
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Frame = -1
Query: 423 KCQICLRTGHIRIQCSKRFDSNFAGGPAALRQPTIS*GEH--------ASSNRPPPSWHS 268
+CQ+C + GH C RFD +F GG + + ++ AS+N SW+
Sbjct: 288 QCQLCGKFGHTAQICYHRFDISFQGGQTTISHSLNNGNQNNIPAMVASASNNPADESWYL 347
Query: 267 TAQSSH 250
+ +SH
Sbjct: 348 DSGASH 353
>emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera]
Length = 920
Score = 48.5 bits (114), Expect(2) = 3e-07
Identities = 24/54 (44%), Positives = 32/54 (59%)
Frame = -3
Query: 172 DSGATHHVTLEYNILIEASPYDGPDMVQIGNDSGL*ITHIGNTSFYSCDRTFRM 11
DSGA+HH+T L SPY G D V IGN L I++IG+ F+S F++
Sbjct: 198 DSGASHHLTQNLGNLTSTSPYTGTDRVTIGNXKHLSISNIGSKXFHSHTHXFQL 251
Score = 32.3 bits (72), Expect(2) = 3e-07
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 9/67 (13%)
Frame = -1
Query: 423 KCQICLRTGHIRIQCSKRFDSNFAGGPAALRQPTIS*GEH---------ASSNRPPPSWH 271
+CQ+C + GH C RFD +F GG P+++ G S++ SW+
Sbjct: 138 QCQLCGKFGHTAQICYHRFDISFQGGXTT-TSPSLNNGNQNNILAMVASFSNSSADESWY 196
Query: 270 STAQSSH 250
+ +SH
Sbjct: 197 LDSGASH 203
>emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]
Length = 1131
Score = 47.4 bits (111), Expect(2) = 4e-07
Identities = 22/56 (39%), Positives = 35/56 (62%)
Frame = -3
Query: 172 DSGATHHVTLEYNILIEASPYDGPDMVQIGNDSGL*ITHIGNTSFYSCDRTFRMHN 5
D+GATHH+T N L +P+ G D V +GN + L I++IG+++ S R+ + N
Sbjct: 303 DTGATHHLTPNLNKLNSHTPFAGSDKVMVGNGNRLNISNIGHSTISSVSRSLNLKN 358
Score = 33.1 bits (74), Expect(2) = 4e-07
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
Frame = -1
Query: 438 SYSQTKCQICLRTGHIRIQCSKRFDSNFAGGPAALRQPTIS*GEHASSNRPPP------S 277
S + +CQ+C + GHI I C RFD + QPT++ H ++ P S
Sbjct: 250 SNGKPQCQVCGKYGHIAINCYHRFDQTY--------QPTMN--NHLAAMVATPSTVGDES 299
Query: 276 WHSTAQSSH 250
W+ ++H
Sbjct: 300 WYMDTGATH 308
>emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera]
Length = 1334
Score = 43.9 bits (102), Expect(2) = 7e-07
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = -3
Query: 172 DSGATHHVTLEYNILIEASPYDGPDMVQIGNDSGL*ITHIGNTSFYSCDRTFRMH 8
D+GATHH++ L PY G D V IG+ + L I + G SF+ +TF ++
Sbjct: 349 DTGATHHLSHSAQTLSCVQPYSGTDQVTIGDGNSLPILNTGTKSFFFPSKTFSLN 403
Score = 35.8 bits (81), Expect(2) = 7e-07
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -1
Query: 432 SQTKCQICLRTGHIRIQCSKRFDSNFAGGPAA-LRQPTIS*GEHASSNRPPPSWHSTAQS 256
++ +CQ+C + GH I+C RFD N+ G L Q S A++ SW +
Sbjct: 293 TRPQCQLCGKFGHTAIKCYHRFDINYQGNNGVPLAQAPFSHAMXAAAPDHQDSWFFDTGA 352
Query: 255 SH 250
+H
Sbjct: 353 TH 354
>emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis chinensis]
Length = 646
Score = 43.5 bits (101), Expect(2) = 9e-07
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = -3
Query: 172 DSGATHHVTLEYNILIEASPYDGPDMVQIGNDSGL*ITHIGNTS 41
D+GATHHVT + L +P+ G D V +GN GL + H G++S
Sbjct: 370 DTGATHHVTSDLANLSLHNPFSGDDKVIVGNGKGLYVLHTGHSS 413
Score = 35.8 bits (81), Expect(2) = 9e-07
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = -1
Query: 477 GHTGIHCSRRFDWSYSQTKCQICLRTGHIRIQCSKRFDSNFAGGPAALRQPTIS*GEHAS 298
G G H ++ S+ +CQIC + GH+ +C RFD+ F QP S S
Sbjct: 295 GFRGGHSNKGRANPGSRPQCQICCKIGHVATECWHRFDNQF--------QPKASHSNQFS 346
Query: 297 SNRPPP 280
S+ P
Sbjct: 347 SSAQDP 352
>emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]
Length = 1434
Score = 43.9 bits (102), Expect(2) = 1e-06
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = -3
Query: 172 DSGATHHVTLEYNILIEASPYDGPDMVQIGNDSGL*ITHIGNTSFYSCDRTFRMH 8
D+GATHH++ L PY G D V IG+ + L I + G SF+ +TF ++
Sbjct: 349 DTGATHHLSHSAQTLSCVQPYSGTDQVTIGDGNSLPILNTGTKSFFFPSKTFSLN 403
Score = 35.0 bits (79), Expect(2) = 1e-06
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -1
Query: 432 SQTKCQICLRTGHIRIQCSKRFDSNFAGGPAA-LRQPTIS*GEHASSNRPPPSWHSTAQS 256
++ +CQ+C + GH I+C RFD N+ G L Q S A++ SW +
Sbjct: 293 TRPQCQLCGKFGHTAIKCYHRFDINYQGNNGVPLAQAPFSHAMLAAAPDHQDSWFFDTGA 352
Query: 255 SH 250
+H
Sbjct: 353 TH 354
>emb|CAN63683.1| hypothetical protein VITISV_030301 [Vitis vinifera]
Length = 1272
Score = 43.5 bits (101), Expect(2) = 2e-06
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = -3
Query: 172 DSGATHHVTLEYNILIEASPYDGPDMVQIGNDSGL*ITHIGNTSFYSCDRTFRMH 8
D+GATHH++ L PY G D V IG+ + L I + G SF+ +TF ++
Sbjct: 349 DTGATHHLSHXAQTLSCVQPYSGTDQVTIGDGNSLPILNTGTKSFFFPSKTFSLN 403
Score = 35.0 bits (79), Expect(2) = 2e-06
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -1
Query: 432 SQTKCQICLRTGHIRIQCSKRFDSNFAGGPAA-LRQPTIS*GEHASSNRPPPSWHSTAQS 256
++ +CQ+C + GH I+C RFD N+ G L Q S A++ SW +
Sbjct: 293 TRPQCQLCGKFGHTAIKCYHRFDINYQGNNGVPLAQAPFSHAMLAAAPDHQDSWFFDTGA 352
Query: 255 SH 250
+H
Sbjct: 353 TH 354
>emb|CAN83304.1| hypothetical protein VITISV_008191 [Vitis vinifera]
Length = 515
Score = 45.1 bits (105), Expect(2) = 2e-06
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = -3
Query: 172 DSGATHHVTLEYNILIEASPYDGPDMVQIGNDSGL*ITHIGNTSFYSCDRTFRMH 8
D+GATHH++ L PY G + V IG+ + L I H G SF+ +TF ++
Sbjct: 321 DTGATHHLSHSVQTLSCVQPYSGTNQVTIGDGNSLPILHTGTKSFFFPSKTFSLN 375
Score = 33.1 bits (74), Expect(2) = 2e-06
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -1
Query: 423 KCQICLRTGHIRIQCSKRFDSNFAGGPAA-LRQPTIS*GEHASSNRPPPSWHSTAQSSH 250
+CQ+C + GH I+C RFD N+ G + Q + S A++ SW ++H
Sbjct: 268 QCQLCGKFGHTVIKCYHRFDINYQGNNSVPPAQASFSHSMLAAAPNHQDSWFFDTGATH 326
>emb|CAN75700.1| hypothetical protein VITISV_035987 [Vitis vinifera]
Length = 1099
Score = 57.4 bits (137), Expect = 4e-06
Identities = 25/56 (44%), Positives = 39/56 (69%)
Frame = -3
Query: 172 DSGATHHVTLEYNILIEASPYDGPDMVQIGNDSGL*ITHIGNTSFYSCDRTFRMHN 5
D GA+HH T + + L +PY+G D + IG+ SGL ITHIG++S ++ TF+++N
Sbjct: 395 DGGASHHATTDLHNLSMHTPYNGSDDIMIGDGSGLSITHIGSSSLHTTHNTFKLNN 450
>emb|CAN74166.1| hypothetical protein VITISV_007721 [Vitis vinifera]
Length = 631
Score = 57.4 bits (137), Expect = 4e-06
Identities = 25/56 (44%), Positives = 40/56 (71%)
Frame = -3
Query: 172 DSGATHHVTLEYNILIEASPYDGPDMVQIGNDSGL*ITHIGNTSFYSCDRTFRMHN 5
D+GA+HHVT + + L +PY+G D + IG+ SGL ITH G++S ++ TF+++N
Sbjct: 17 DNGASHHVTTDLHNLSMHTPYNGSDDIMIGDGSGLSITHTGSSSLHTTHNTFKLNN 72
>emb|CAN73349.1| hypothetical protein VITISV_009748 [Vitis vinifera]
Length = 424
Score = 57.0 bits (136), Expect = 5e-06
Identities = 27/56 (48%), Positives = 37/56 (66%)
Frame = -3
Query: 172 DSGATHHVTLEYNILIEASPYDGPDMVQIGNDSGL*ITHIGNTSFYSCDRTFRMHN 5
DSGA+HHVT + + L SP+DG D + IGN SGL I+H G+TS + +F + N
Sbjct: 292 DSGASHHVTTDLHNLALHSPFDGTDEIMIGNGSGLPISHTGSTSLTTPSHSFTLSN 347
>emb|CBI31290.3| unnamed protein product [Vitis vinifera]
Length = 1201
Score = 43.1 bits (100), Expect(2) = 6e-06
Identities = 19/56 (33%), Positives = 32/56 (57%)
Frame = -3
Query: 172 DSGATHHVTLEYNILIEASPYDGPDMVQIGNDSGL*ITHIGNTSFYSCDRTFRMHN 5
DS ATHH++ + +PY+G D V + N L IT +G++ ++ + F +HN
Sbjct: 449 DSSATHHLSHTAANIHNGTPYNGTDSVMVDNGKSLPITQVGHSFLHTSAKPFVLHN 504
Score = 33.5 bits (75), Expect(2) = 6e-06
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 15/82 (18%)
Frame = -1
Query: 450 RFDWSYSQT----KCQICLRTGHIRIQCSKRFDSNFAG-----------GPAALRQPTIS 316
RF+ + S+T +CQ+C + GH+ + C RFD N+ G GP L Q ++
Sbjct: 377 RFNNNRSRTNNRPQCQLCGKFGHMVLSCYHRFDVNYQGPRAPASSTSQIGPIPLAQAMMA 436
Query: 315 *GEHASSNRPPPSWHSTAQSSH 250
A S SW + ++H
Sbjct: 437 ----APSPTLMDSWFLDSSATH 454
>ref|XP_004301329.1| PREDICTED: uncharacterized protein LOC101296391 [Fragaria vesca
subsp. vesca]
Length = 323
Score = 42.0 bits (97), Expect(2) = 1e-05
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = -3
Query: 172 DSGATHHVTLEYNILIEASPYDGPDMVQ-IGNDSGL*ITHIGNTSFYSCDRTFRMHN 5
DSGA H+T + L Y G D V IGN++ L I+H G+T+ + TF++H+
Sbjct: 230 DSGANSHITSDLGNLQNPKEYQGNDRVGGIGNETPLSISHTGSTTLSTPTHTFKLHD 286
Score = 33.9 bits (76), Expect(2) = 1e-05
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -1
Query: 420 CQICLRTGHIRIQCSKRFDSNFAGGPAALRQPTIS*GEHASSNRP-PPSW 274
CQIC +TGH + C R + +F G + ++ AS + P PP+W
Sbjct: 182 CQICSKTGHTALDCYNRLNLSFQGRVPSRNLSAMA----ASGSTPAPPTW 227