BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00039481
         (612 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA22288.1| polyprotein [Oryza australiensis]                     144   1e-39
gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc...   129   2e-36
gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]     129   2e-36
gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subc...   128   4e-35
gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]     128   4e-35
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...   123   4e-33
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap...   124   5e-33
emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]        132   7e-29
gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subc...   117   4e-27
gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subc...   126   4e-27
emb|CAE02400.1| OSJNBa0024J22.4 [Oryza sativa Japonica Group] gi...   126   5e-27
gb|AAX96621.1| retrotransposon protein, putative, Ty1-copia sub-...   124   3e-26
gb|EOY19271.1| Retrotransposon protein, putative [Theobroma cacao]    123   3e-26
gb|EOY04065.1| Retrotransposon protein, putative [Theobroma cacao]    120   4e-25
gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e...   119   9e-25
emb|CAD40471.2| OSJNBa0067G20.17 [Oryza sativa Japonica Group]        118   1e-24
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc...   113   4e-23
ref|XP_006436321.1| hypothetical protein CICLE_v10033628mg, part...   110   4e-22
ref|XP_006421106.1| hypothetical protein CICLE_v10006890mg, part...   109   5e-22
ref|XP_006587404.1| PREDICTED: uncharacterized protein LOC102662...   108   2e-21

>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  144 bits (362), Expect(2) = 1e-39
 Identities = 72/150 (48%), Positives = 94/150 (62%), Gaps = 2/150 (1%)
 Frame = +3

Query: 9   HVLKMIGYVENLERLGFPLGQELATDLILQSLSASYRQFVMNYNMNELDKPLPEMLNMLR 188
           HV+KMIGY+E+LE+LGFPL QELATD+ILQSL  S+  F++NY+MN +D+ L E+  ML+
Sbjct: 137 HVIKMIGYIESLEKLGFPLSQELATDVILQSLPPSFEPFILNYHMNNMDRTLAELHGMLK 196

Query: 189 TAEPNLTTTKTSTVLMVXXXXXXXXXXXXXXXXXXXXXXASSSALK--PKGGVQKDATCF 362
           T E ++       ++M                       AS+S  K   KG    DA CF
Sbjct: 197 TVEESIQKNGHHVMMMQNAKRKPPVKKLCTKRKLTPDEIASASNAKKGKKGSAASDAVCF 256

Query: 363 HCGQTGHWKRNCKVYLEDLKKKRSETSTSG 452
           +C +TGHWKRNCK Y+EDLKKK+S TS SG
Sbjct: 257 YCKETGHWKRNCKKYMEDLKKKQSTTSASG 286



 Score = 45.8 bits (107), Expect(2) = 1e-39
 Identities = 26/56 (46%), Positives = 31/56 (55%)
 Frame = +1

Query: 445 LQALRNSRALAKGEVDLXXXXXXXXXXXXXXTYFLSLPSGLVLELDDCCYVPALTQ 612
           LQ +R SR L +GEV+L              T  L LPSGLVLEL++C  VP L Q
Sbjct: 316 LQGMRRSRGLRRGEVNLRVGNGASVATVAVGTVPLHLPSGLVLELNNCYCVPTLCQ 371


>gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1073

 Score =  129 bits (325), Expect(2) = 2e-36
 Identities = 70/151 (46%), Positives = 92/151 (60%), Gaps = 3/151 (1%)
 Frame = +3

Query: 9   HVLKMIGYVENLERLGFPLGQELATDLILQSLSASYRQFVMNYNMNELDKPLPEMLNMLR 188
           HV+KMIGY E+L++LGFPL +ELATDLILQSL  S+  F+MN+NMN L++ L E+  ML+
Sbjct: 228 HVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNRTLAELHGMLK 287

Query: 189 TAEPNLTTTKTSTVLMVXXXXXXXXXXXXXXXXXXXXXXASSSALK-PKGGVQKDATCFH 365
           TAE ++       ++M                        S+S  K  K G  KDA CF 
Sbjct: 288 TAEESIKKNSNHVMVMHKRKPNNKKSGQKRKLNSDEITSTSNSKTKVQKTGPAKDAECFF 347

Query: 366 CGQTGHWKRNCKVYLEDLKKKRSE--TSTSG 452
             +TGHWKRNCK YLE LK+K+ +  +STSG
Sbjct: 348 YKETGHWKRNCKKYLEQLKQKQQDGKSSTSG 378



 Score = 49.3 bits (116), Expect(2) = 2e-36
 Identities = 26/54 (48%), Positives = 33/54 (61%)
 Frame = +1

Query: 445 LQALRNSRALAKGEVDLXXXXXXXXXXXXXXTYFLSLPSGLVLELDDCCYVPAL 606
           LQ L+ SR+LA+G VD+              T  LSLPSGLVLEL++C  +PAL
Sbjct: 408 LQGLKRSRSLARGRVDIRVGNGERVAVVAVGTMTLSLPSGLVLELNNCYCIPAL 461


>gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1063

 Score =  129 bits (325), Expect(2) = 2e-36
 Identities = 70/151 (46%), Positives = 92/151 (60%), Gaps = 3/151 (1%)
 Frame = +3

Query: 9   HVLKMIGYVENLERLGFPLGQELATDLILQSLSASYRQFVMNYNMNELDKPLPEMLNMLR 188
           HV+KMIGY E+L++LGFPL +ELATDLILQSL  S+  F+MN+NMN L++ L E+  ML+
Sbjct: 228 HVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNRTLAELHGMLK 287

Query: 189 TAEPNLTTTKTSTVLMVXXXXXXXXXXXXXXXXXXXXXXASSSALK-PKGGVQKDATCFH 365
           TAE ++       ++M                        S+S  K  K G  KDA CF 
Sbjct: 288 TAEESIKKNSNHVMVMHKRKPNNKKSGQKRKLNSDEITSTSNSKTKVQKTGPAKDAECFF 347

Query: 366 CGQTGHWKRNCKVYLEDLKKKRSE--TSTSG 452
             +TGHWKRNCK YLE LK+K+ +  +STSG
Sbjct: 348 YKETGHWKRNCKKYLEQLKQKQQDGKSSTSG 378



 Score = 49.3 bits (116), Expect(2) = 2e-36
 Identities = 26/54 (48%), Positives = 33/54 (61%)
 Frame = +1

Query: 445 LQALRNSRALAKGEVDLXXXXXXXXXXXXXXTYFLSLPSGLVLELDDCCYVPAL 606
           LQ L+ SR+LA+G VD+              T  LSLPSGLVLEL++C  +PAL
Sbjct: 408 LQGLKRSRSLARGRVDIRVGNGERVAVVAVGTMTLSLPSGLVLELNNCYCIPAL 461


>gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1142

 Score =  128 bits (321), Expect(2) = 4e-35
 Identities = 69/151 (45%), Positives = 91/151 (60%), Gaps = 3/151 (1%)
 Frame = +3

Query: 9   HVLKMIGYVENLERLGFPLGQELATDLILQSLSASYRQFVMNYNMNELDKPLPEMLNMLR 188
           HV+KMIGY E+L++LGFPL +EL TDLILQSL  S+  F+MN+NMN L++ L E+  ML+
Sbjct: 188 HVIKMIGYTESLDKLGFPLNRELVTDLILQSLPPSFEPFIMNFNMNNLNRTLAELHGMLK 247

Query: 189 TAEPNLTTTKTSTVLMVXXXXXXXXXXXXXXXXXXXXXXASSSALK-PKGGVQKDATCFH 365
           TAE ++       ++M                        S+S  K  K G  KDA CF 
Sbjct: 248 TAEESIKKNSNHVMVMHKRKPNNKKSGQKRKLNSDEITSTSNSKTKVQKTGPAKDAECFF 307

Query: 366 CGQTGHWKRNCKVYLEDLKKKRSE--TSTSG 452
           C +TGHWKRN K YLE LK+K+ +  +STSG
Sbjct: 308 CKETGHWKRNYKKYLEQLKQKQQDGKSSTSG 338



 Score = 46.2 bits (108), Expect(2) = 4e-35
 Identities = 25/54 (46%), Positives = 33/54 (61%)
 Frame = +1

Query: 445 LQALRNSRALAKGEVDLXXXXXXXXXXXXXXTYFLSLPSGLVLELDDCCYVPAL 606
           LQ L+ SR+LA+GEVD+              T  LSLPSG+VLEL++C  + AL
Sbjct: 368 LQGLKRSRSLARGEVDIRVGNGARVAAVAVGTMPLSLPSGIVLELNNCYCIRAL 421


>gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1084

 Score =  128 bits (321), Expect(2) = 4e-35
 Identities = 69/151 (45%), Positives = 91/151 (60%), Gaps = 3/151 (1%)
 Frame = +3

Query: 9   HVLKMIGYVENLERLGFPLGQELATDLILQSLSASYRQFVMNYNMNELDKPLPEMLNMLR 188
           HV+KMIGY E+L++LGFPL +EL TDLILQSL  S+  F+MN+NMN L++ L E+  ML+
Sbjct: 115 HVIKMIGYTESLDKLGFPLNRELVTDLILQSLPPSFEPFIMNFNMNNLNRTLAELHGMLK 174

Query: 189 TAEPNLTTTKTSTVLMVXXXXXXXXXXXXXXXXXXXXXXASSSALK-PKGGVQKDATCFH 365
           TAE ++       ++M                        S+S  K  K G  KDA CF 
Sbjct: 175 TAEESIKKNSNHVMVMHKRKPNNKKSGQKRKLNSDEITSTSNSKTKVQKTGPAKDAECFF 234

Query: 366 CGQTGHWKRNCKVYLEDLKKKRSE--TSTSG 452
           C +TGHWKRN K YLE LK+K+ +  +STSG
Sbjct: 235 CKETGHWKRNYKKYLEQLKQKQQDGKSSTSG 265



 Score = 46.2 bits (108), Expect(2) = 4e-35
 Identities = 25/54 (46%), Positives = 33/54 (61%)
 Frame = +1

Query: 445 LQALRNSRALAKGEVDLXXXXXXXXXXXXXXTYFLSLPSGLVLELDDCCYVPAL 606
           LQ L+ SR+LA+GEVD+              T  LSLPSG+VLEL++C  + AL
Sbjct: 295 LQGLKRSRSLARGEVDIRVGNGARVAAVAVGTMPLSLPSGIVLELNNCYCIRAL 348


>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score =  123 bits (309), Expect(2) = 4e-33
 Identities = 65/152 (42%), Positives = 91/152 (59%), Gaps = 4/152 (2%)
 Frame = +3

Query: 9   HVLKMIGYVENLERLGFPLGQELATDLILQSLSASYRQFVMNYNMNELDKPLPEMLNMLR 188
           H++KM+GY ++LE+LGFPL QELATDLIL SL ASY QF++N++MN LDK L E+  +L+
Sbjct: 223 HMIKMVGYTQSLEKLGFPLSQELATDLILASLPASYGQFILNFHMNGLDKNLTELHMLLK 282

Query: 189 TAEPNLTTTKTSTVLM---VXXXXXXXXXXXXXXXXXXXXXXASSSALKPKGGVQKDATC 359
           TAE ++    +  +++                           +   LK K G  ++  C
Sbjct: 283 TAEDSIKKINSHVMMVQKSTSFKKKARTWVKGKGKKVLDGIQTNKPKLKTKSGPTQENEC 342

Query: 360 FHCGQTGHWKRNCKVYLEDLKKK-RSETSTSG 452
           F+C + GHWKRNCK YL DLKK   ++ STSG
Sbjct: 343 FYCKEPGHWKRNCKKYLADLKKNGGTKPSTSG 374



 Score = 44.3 bits (103), Expect(2) = 4e-33
 Identities = 21/56 (37%), Positives = 34/56 (60%)
 Frame = +1

Query: 445 LQALRNSRALAKGEVDLXXXXXXXXXXXXXXTYFLSLPSGLVLELDDCCYVPALTQ 612
           +Q+L  +R +A+GE+DL              T  L LPSG ++EL++C YVPA+++
Sbjct: 404 MQSLTKNRRVARGEMDLRVGNKAKVAALSAETLPLVLPSGFIMELNNCYYVPAMSR 459


>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
           gi|62701883|gb|AAX92956.1| retrotransposon protein,
           putative, Ty1-copia sub-class [Oryza sativa Japonica
           Group] gi|108864259|gb|ABA92827.2| retrotransposon
           protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1184

 Score =  124 bits (311), Expect(2) = 5e-33
 Identities = 66/150 (44%), Positives = 87/150 (58%), Gaps = 2/150 (1%)
 Frame = +3

Query: 9   HVLKMIGYVENLERLGFPLGQELATDLILQSLSASYRQFVMNYNMNELDKPLPEMLNMLR 188
           HV+KMIGY E LE+LGFPL QELATDLILQSL  S+  F++N+NMN +++ L ++  ML+
Sbjct: 136 HVIKMIGYNETLEKLGFPLSQELATDLILQSLPPSFEPFILNFNMNNMNRTLTKLPGMLK 195

Query: 189 TAEPNLTTTKTSTVLMVXXXXXXXXXXXXXXXXXXXXXXASSSALKPKGGVQKDATCFHC 368
           TAE ++       ++M                               K G  KDA CF C
Sbjct: 196 TAEESIKKNSNHVMVM-----------------------HKRKPNNKKSGPAKDAECFFC 232

Query: 369 GQTGHWKRNCKVYLEDLKKKRSE--TSTSG 452
            + GHWKRNCK YLE LK+K+ +  +STSG
Sbjct: 233 KEAGHWKRNCKKYLEQLKQKQQDGKSSTSG 262



 Score = 43.1 bits (100), Expect(2) = 5e-33
 Identities = 25/54 (46%), Positives = 32/54 (59%)
 Frame = +1

Query: 445 LQALRNSRALAKGEVDLXXXXXXXXXXXXXXTYFLSLPSGLVLELDDCCYVPAL 606
           LQ L+ SR+LA+GEVD+              T  LSLPS LVLEL++   +PAL
Sbjct: 292 LQGLKRSRSLARGEVDIRVGNGARVAAVAVGTMPLSLPSRLVLELNNYYCIPAL 345


>emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]
          Length = 948

 Score =  132 bits (332), Expect = 7e-29
 Identities = 71/150 (47%), Positives = 92/150 (61%), Gaps = 3/150 (2%)
 Frame = +3

Query: 9   HVLKMIGYVENLERLGFPLGQELATDLILQSLSASYRQFVMNYNMNELDKPLPEMLNMLR 188
           HV+KMIGY E+L++LGFPL +ELATDLILQSL  S+  F+MN+NMN L++ L E+  ML+
Sbjct: 213 HVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNRTLAELHGMLK 272

Query: 189 TAEPNLTTTKTSTVLMVXXXXXXXXXXXXXXXXXXXXXXASSSALK---PKGGVQKDATC 359
           TAE ++   K S  +MV                       S+S  K    K G  KDA C
Sbjct: 273 TAEESI--KKNSNYVMVMHKLKPNNKKSGQKRKLNSDEITSTSNCKTKVQKTGPAKDAEC 330

Query: 360 FHCGQTGHWKRNCKVYLEDLKKKRSETSTS 449
           F C +TGHWKRNCK YLE LK+K+ +  +S
Sbjct: 331 FFCKETGHWKRNCKKYLEQLKQKQQDGKSS 360


>gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1050

 Score =  117 bits (293), Expect(2) = 4e-27
 Identities = 66/147 (44%), Positives = 86/147 (58%), Gaps = 5/147 (3%)
 Frame = +3

Query: 9   HVLKMIGYVENLERLGFPLGQELATDLILQSLSASYRQFVMNYNMNELDKPLPEMLNMLR 188
           H++KMIGY E+L++LGFPL QELATDLILQSL  S+  F+MN+NMN L+K L E+  ML+
Sbjct: 188 HMIKMIGYTESLDKLGFPLSQELATDLILQSLPPSFEPFIMNFNMNNLNKTLAELHGMLK 247

Query: 189 TAEPNLTTTKTSTVLMVXXXXXXXXXXXXXXXXXXXXXXASSSALK-PKGGVQKDATCFH 365
           TA+ ++       ++M                        S+S  K  K G  KDA CF 
Sbjct: 248 TAKESIKKNSNHVMVMHKSKPNNKKSGQKRKLNSDEITSTSNSKTKVQKTGPAKDAECFF 307

Query: 366 CGQTGHWKRN----CKVYLEDLKKKRS 434
           C +TGHWKRN    CK  L+ LK+ RS
Sbjct: 308 CKETGHWKRNFAHICK-SLQGLKRSRS 333



 Score = 30.4 bits (67), Expect(2) = 4e-27
 Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
 Frame = +1

Query: 445 LQALRNSRALAKGEVDLXXXXXXXXXXXXXXTYFLSLPSGLVLELD------DCCYVPAL 606
           LQ L+ SR+LA+GEVD+               Y  S   G  L L+      +C  VP L
Sbjct: 325 LQGLKRSRSLARGEVDIRVGNGARVAAVATIKYLRSDRGGEYLSLEFGNHLKECGIVPQL 384

Query: 607 T 609
           T
Sbjct: 385 T 385


>gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 829

 Score =  126 bits (317), Expect = 4e-27
 Identities = 66/148 (44%), Positives = 89/148 (60%), Gaps = 1/148 (0%)
 Frame = +3

Query: 9   HVLKMIGYVENLERLGFPLGQELATDLILQSLSASYRQFVMNYNMNELDKPLPEMLNMLR 188
           HV+K+IGY E+L++LGFPL +ELATDLILQSL  S+  F+MN+NMN L++ L E+  ML+
Sbjct: 215 HVIKIIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNRTLAELHGMLK 274

Query: 189 TAEPNLTTTKTSTVLMVXXXXXXXXXXXXXXXXXXXXXXASSSALK-PKGGVQKDATCFH 365
           TAE ++       ++M                        S+S  K  K G  KDA CF 
Sbjct: 275 TAEESIKKNSNHVMVMHKRKPNNKKSGQKRKLNSDEITSTSNSKTKVQKTGPAKDAECFF 334

Query: 366 CGQTGHWKRNCKVYLEDLKKKRSETSTS 449
             +TGHWKRNCK YLE LK+K+ +  +S
Sbjct: 335 YKETGHWKRNCKKYLEQLKQKQQDGKSS 362


>emb|CAE02400.1| OSJNBa0024J22.4 [Oryza sativa Japonica Group]
           gi|38347202|emb|CAD40526.2| OSJNBa0023J03.14 [Oryza
           sativa Japonica Group] gi|116308930|emb|CAH66059.1|
           OSIGBa0125J07.8 [Oryza sativa Indica Group]
           gi|116309043|emb|CAH66155.1| OSIGBa0113B06.1 [Oryza
           sativa Indica Group]
          Length = 704

 Score =  126 bits (316), Expect = 5e-27
 Identities = 66/148 (44%), Positives = 89/148 (60%), Gaps = 1/148 (0%)
 Frame = +3

Query: 9   HVLKMIGYVENLERLGFPLGQELATDLILQSLSASYRQFVMNYNMNELDKPLPEMLNMLR 188
           HV+KMIGY E+L++LGFPL +ELATDLILQSL  S+  F+MN+NMN ++K L E+  ML+
Sbjct: 77  HVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNMNKTLAELHGMLK 136

Query: 189 TAEPNLTTTKTSTVLMVXXXXXXXXXXXXXXXXXXXXXXASSSALK-PKGGVQKDATCFH 365
           TAE ++       ++M                        S+S  K  K G  KDA CF 
Sbjct: 137 TAEESIKKNSNHVMVMHKRNPNNKKSGQKRKLYSDEITSTSNSKTKVQKTGPAKDAECFF 196

Query: 366 CGQTGHWKRNCKVYLEDLKKKRSETSTS 449
           C +T +WKRNCK YLE LK+K+   ++S
Sbjct: 197 CKETVYWKRNCKKYLEQLKQKQQYRNSS 224


>gb|AAX96621.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77550176|gb|ABA92973.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 591

 Score =  124 bits (310), Expect = 3e-26
 Identities = 66/148 (44%), Positives = 87/148 (58%), Gaps = 1/148 (0%)
 Frame = +3

Query: 9   HVLKMIGYVENLERLGFPLGQELATDLILQSLSASYRQFVMNYNMNELDKPLPEMLNMLR 188
           HV+KMIGY E+L++LGFPL +ELATDLILQSL  S+  F+MN+NMN L++ L E+   L+
Sbjct: 158 HVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNRTLAELHVTLK 217

Query: 189 TAEPNLTTTKTSTVLMVXXXXXXXXXXXXXXXXXXXXXXASSSALK-PKGGVQKDATCFH 365
           TAE ++       + M                        S+S  K  K G  KDA CF 
Sbjct: 218 TAEESIKKNSNHVMGMHKRKPNNKKSGQKRKLNSDEITTTSNSKTKVQKTGPAKDAECFI 277

Query: 366 CGQTGHWKRNCKVYLEDLKKKRSETSTS 449
           C + GHWKRNCK YLE LK+K+ +  +S
Sbjct: 278 CKEIGHWKRNCKKYLEQLKQKQQDGKSS 305


>gb|EOY19271.1| Retrotransposon protein, putative [Theobroma cacao]
          Length = 277

 Score =  123 bits (309), Expect = 3e-26
 Identities = 67/155 (43%), Positives = 92/155 (59%), Gaps = 5/155 (3%)
 Frame = +3

Query: 9   HVLKMIGYVENLERLGFPLGQELATDLILQSLSASYRQFVMNYNMNELDKPLPEMLNMLR 188
           HVLKMIG +E L +LG  +  EL+ DL+LQSL  S+ QF++N++MN L+  LPE+LNML 
Sbjct: 120 HVLKMIGLIERLRQLGLAMDHELSIDLVLQSLPDSFSQFMLNFHMNRLEATLPELLNMLD 179

Query: 189 TAEPNLTTTKTSTVLMVXXXXXXXXXXXXXXXXXXXXXXASSSALKPKGGVQKDA---TC 359
           TA+ ++   K S +L++                       +  ALKPKGGV+KD     C
Sbjct: 180 TAKRSIRKDKGS-LLLLSFSKAHTKQQKKKAQKGKKVKSQNEKALKPKGGVKKDKETDIC 238

Query: 360 FHCGQTGHWKRNCKVYLEDLKKKRS--ETSTSGAE 458
            HCG+ GHW+RNCK YL  + KK+   E S SG +
Sbjct: 239 HHCGKLGHWRRNCKEYLATVSKKKKLIEVSDSGTK 273


>gb|EOY04065.1| Retrotransposon protein, putative [Theobroma cacao]
          Length = 289

 Score =  120 bits (300), Expect = 4e-25
 Identities = 67/155 (43%), Positives = 92/155 (59%), Gaps = 5/155 (3%)
 Frame = +3

Query: 9   HVLKMIGYVENLERLGFPLGQELATDLILQSLSASYRQFVMNYNMNELDKPLPEMLNMLR 188
           HVLKMIG +E L +LG  +  EL+ +L+LQSL  S+ QFV+N++MN L+  LP++LNML 
Sbjct: 132 HVLKMIGPIERLGQLGLAMYHELSINLVLQSLPDSFSQFVLNFHMNRLEATLPKLLNMLD 191

Query: 189 TAEPNLTTTKTSTVLMVXXXXXXXXXXXXXXXXXXXXXXASSSALKPKGGVQKDA---TC 359
           TAE ++   K S +L++                       +  ALKPKGGV+KD     C
Sbjct: 192 TAEKSIRKHKGS-LLLISSSKAHTKQHKKKAQKEKKVKSQNEKALKPKGGVKKDKEKDIC 250

Query: 360 FHCGQTGHWKRNCKVYLEDLKKKRS--ETSTSGAE 458
            HCG+ GHW+RNCK YL  + KK+   E S SG +
Sbjct: 251 DHCGKLGHWRRNCKEYLVTVSKKKKLIEVSDSGTK 285


>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 896

 Score =  119 bits (297), Expect = 9e-25
 Identities = 64/153 (41%), Positives = 88/153 (57%), Gaps = 5/153 (3%)
 Frame = +3

Query: 9   HVLKMIGYVENLERLGFPLGQELATDLILQSLSASYRQFVMNYNMNELDKPLPEMLNMLR 188
           HV+KM+GY ++LE+LGFPL QELATDLIL SL  SY QF++N++MN LDK L E+  ML+
Sbjct: 140 HVIKMVGYTQSLEKLGFPLSQELATDLILASLPESYGQFILNFHMNGLDKNLTELHMMLK 199

Query: 189 TAEPNLTTTKTSTVLMVXXXXXXXXXXXXXXXXXXXXXXASSSALKP----KGGVQKDAT 356
           TAE ++       +++                             KP    K G  ++  
Sbjct: 200 TAEGSVKKCNNHVIMVQKSTSFKKKAKTWIKKKGKAKVSDKIQTDKPKTKTKSGPTQENE 259

Query: 357 CFHCGQTGHWKRNCKVYLEDLKKK-RSETSTSG 452
           CF+C + GHWKRNCK YL D K+   ++TST+G
Sbjct: 260 CFYCKELGHWKRNCKKYLADQKRNGGTKTSTTG 292


>emb|CAD40471.2| OSJNBa0067G20.17 [Oryza sativa Japonica Group]
          Length = 276

 Score =  118 bits (295), Expect = 1e-24
 Identities = 67/144 (46%), Positives = 86/144 (59%), Gaps = 3/144 (2%)
 Frame = +3

Query: 9   HVLKMIGYVENLERLGFPLGQELATDLILQSLSASYRQFVMNYNMNELDKPLPEMLNMLR 188
           +V+KMIGY E+LE+LGFPL +ELA DLILQSL  S++ F+MN+NM   D+ L E+  ML+
Sbjct: 138 NVIKMIGYTESLEKLGFPLSKELAIDLILQSLPPSFKPFIMNFNM---DRTLAELHGMLK 194

Query: 189 TAEPNLTTTKTSTVLMVXXXXXXXXXXXXXXXXXXXXXXASSSALK---PKGGVQKDATC 359
           TAE ++   K S  +MV                       S+S  K    K G  KDA C
Sbjct: 195 TAEESI--KKNSNYVMVMHKCKPNNKKSGQKRKLNSDEITSTSNSKTKVQKTGPAKDAEC 252

Query: 360 FHCGQTGHWKRNCKVYLEDLKKKR 431
           F C +TGHWKRNCK YLE  K+K+
Sbjct: 253 FFCKETGHWKRNCKKYLEQFKQKQ 276


>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1248

 Score =  113 bits (283), Expect = 4e-23
 Identities = 59/130 (45%), Positives = 77/130 (59%), Gaps = 1/130 (0%)
 Frame = +3

Query: 9   HVLKMIGYVENLERLGFPLGQELATDLILQSLSASYRQFVMNYNMNELDKPLPEMLNMLR 188
           HV+KMIGY E+L++LGFPL +ELATDLILQSL  S+  F+MN+NMN L++ L E+  ML+
Sbjct: 203 HVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNRTLAELHGMLK 262

Query: 189 TAEPNLTTTKTSTVLMVXXXXXXXXXXXXXXXXXXXXXXASSSALK-PKGGVQKDATCFH 365
           TAE ++       ++M                        S+S  K  K G  KDA CF 
Sbjct: 263 TAEESIKKNSNHVMVMHKRKPNNKKSGQKRKLNSDEITSTSNSKTKVQKTGSAKDAECFF 322

Query: 366 CGQTGHWKRN 395
           C +TGHWKRN
Sbjct: 323 CKETGHWKRN 332


>ref|XP_006436321.1| hypothetical protein CICLE_v10033628mg, partial [Citrus clementina]
           gi|557538517|gb|ESR49561.1| hypothetical protein
           CICLE_v10033628mg, partial [Citrus clementina]
          Length = 263

 Score =  110 bits (274), Expect = 4e-22
 Identities = 63/143 (44%), Positives = 74/143 (51%)
 Frame = +3

Query: 9   HVLKMIGYVENLERLGFPLGQELATDLILQSLSASYRQFVMNYNMNELDKPLPEMLNMLR 188
           HVLKMI Y+E LE L F +  ELA DLILQSL  S+ QF+MN+NMN+++  L E+L ML 
Sbjct: 124 HVLKMIDYIEQLEALNFSMDGELAIDLILQSLPDSFSQFIMNFNMNKMECSLAELLKMLN 183

Query: 189 TAEPNLTTTKTSTVLMVXXXXXXXXXXXXXXXXXXXXXXASSSALKPKGGVQKDATCFHC 368
           TAE   T  K    +M                           A KP         CFHC
Sbjct: 184 TAE---TCIKKPKDVMAIEGSSAKKGKKKKFQPKAKGGIKKGKANKP----NDKGKCFHC 236

Query: 369 GQTGHWKRNCKVYLEDLKKKRSE 437
           G+ GHWKRNCK YL  LK K  E
Sbjct: 237 GKDGHWKRNCKAYLNSLKVKPKE 259


>ref|XP_006421106.1| hypothetical protein CICLE_v10006890mg, partial [Citrus clementina]
           gi|557522979|gb|ESR34346.1| hypothetical protein
           CICLE_v10006890mg, partial [Citrus clementina]
          Length = 182

 Score =  109 bits (273), Expect = 5e-22
 Identities = 63/151 (41%), Positives = 77/151 (50%), Gaps = 8/151 (5%)
 Frame = +3

Query: 9   HVLKMIGYVENLERLGFPLGQELATDLILQSLSASYRQFVMNYNMNELDKPLPEMLNMLR 188
           HVLKMI Y+E LE L F +  ELA DLILQSL  S+ QF+MN+NMN+++  L E+L ML 
Sbjct: 43  HVLKMIDYIEQLEALNFSMDGELAIDLILQSLPDSFSQFIMNFNMNKMECSLAELLKMLN 102

Query: 189 TAEPNLTTTKTSTVLMVXXXXXXXXXXXXXXXXXXXXXXASSSALKPKGGVQK------- 347
           TAE  +   K    +                              K KGG++K       
Sbjct: 103 TAESCIKKPKDVMAI---------------EGPSTKKGKKKKFQPKAKGGIKKGKANKPN 147

Query: 348 -DATCFHCGQTGHWKRNCKVYLEDLKKKRSE 437
               CFHCG+ GHWKRNCK YL  LK K  E
Sbjct: 148 DKGKCFHCGKDGHWKRNCKAYLNSLKVKPKE 178


>ref|XP_006587404.1| PREDICTED: uncharacterized protein LOC102662010, partial [Glycine
           max]
          Length = 277

 Score =  108 bits (269), Expect = 2e-21
 Identities = 63/154 (40%), Positives = 82/154 (53%), Gaps = 11/154 (7%)
 Frame = +3

Query: 3   GTHVLKMIGYVENLERLGFPLGQELATDLILQSLSASYRQFVMNYNMNELDKPLPEMLNM 182
           G HVLKMI  +E LE+LG  LG+EL+ DLI+QSLS S+ QF++N+NMN++   L EMLN+
Sbjct: 128 GPHVLKMIDLIEQLEKLGCTLGKELSQDLIMQSLSDSFSQFIVNFNMNKISCDLHEMLNL 187

Query: 183 LRTAEPNLTTTKTSTVLMVXXXXXXXXXXXXXXXXXXXXXXASSSALKPKGGV------- 341
           L   E  + + K    +MV                           L PKGG+       
Sbjct: 188 LIDYENQIASKKKKGTVMV-----------VGNNSKKKGKVPKRKNLGPKGGMTKPMNKR 236

Query: 342 ----QKDATCFHCGQTGHWKRNCKVYLEDLKKKR 431
               Q DA CF   + GHWKRNCK YL+ LK K+
Sbjct: 237 NKIDQTDAECFFYKEKGHWKRNCKKYLDSLKNKK 270