BLASTX nr result

ID: Zingiber23_contig00039461 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00039461
         (247 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004516101.1| PREDICTED: cleavage and polyadenylation spec...    92   7e-17
ref|XP_004516100.1| PREDICTED: uncharacterized PE-PGRS family pr...    91   1e-16
ref|XP_004293188.1| PREDICTED: uncharacterized protein LOC101300...    89   6e-16
ref|XP_006401427.1| hypothetical protein EUTSA_v10012809mg [Eutr...    88   1e-15
ref|XP_006280096.1| hypothetical protein CARUB_v10025989mg [Caps...    88   1e-15
gb|EMJ14823.1| hypothetical protein PRUPE_ppa002096mg [Prunus pe...    88   1e-15
ref|NP_200378.1| RNA recognition motif-containing protein [Arabi...    88   1e-15
ref|NP_001190548.1| RNA recognition motif-containing protein [Ar...    88   1e-15
gb|EOY12029.1| RNA-binding family protein isoform 1 [Theobroma c...    87   3e-15
ref|XP_004165306.1| PREDICTED: uncharacterized LOC101212980 [Cuc...    87   3e-15
ref|XP_004162742.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    87   3e-15
ref|XP_004148927.1| PREDICTED: uncharacterized protein LOC101212...    87   3e-15
ref|XP_004148926.1| PREDICTED: uncharacterized protein LOC101212...    87   3e-15
gb|EXB36065.1| RNA-binding motif protein, X chromosome [Morus no...    86   4e-15
ref|XP_002522751.1| RNA-binding protein, putative [Ricinus commu...    86   5e-15
ref|XP_006661346.1| PREDICTED: cleavage and polyadenylation spec...    85   1e-14
ref|NP_001063463.1| Os09g0476100 [Oryza sativa Japonica Group] g...    85   1e-14
ref|XP_002866107.1| hypothetical protein ARALYDRAFT_495654 [Arab...    85   1e-14
gb|EAZ09482.1| hypothetical protein OsI_31754 [Oryza sativa Indi...    85   1e-14
ref|XP_004244045.1| PREDICTED: uncharacterized protein LOC101251...    84   1e-14

>ref|XP_004516101.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           CG7185-like isoform X1 [Cicer arietinum]
           gi|502177700|ref|XP_004516102.1| PREDICTED: cleavage and
           polyadenylation specificity factor subunit CG7185-like
           isoform X2 [Cicer arietinum]
          Length = 670

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 45/81 (55%), Positives = 49/81 (60%)
 Frame = +3

Query: 3   GGFGNEGFQRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFVGDLHWWTTDAELEAELCK 182
           G  GN+G  RQ                            LFVGDLHWWTTDAELEAELCK
Sbjct: 164 GNDGNDGLVRQGQGVGGGNGGVNSVSAGNGGGGEGGGTVLFVGDLHWWTTDAELEAELCK 223

Query: 183 YGQVKEVRFYDERASGKSKGY 245
           YGQVKE+RF+DE+ASGKSKGY
Sbjct: 224 YGQVKEIRFFDEKASGKSKGY 244


>ref|XP_004516100.1| PREDICTED: uncharacterized PE-PGRS family protein PE_PGRS54-like
           [Cicer arietinum]
          Length = 710

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 40/42 (95%), Positives = 42/42 (100%)
 Frame = +3

Query: 120 LFVGDLHWWTTDAELEAELCKYGQVKEVRFYDERASGKSKGY 245
           LFVGDLHWWTTDAELEAELCKYGQVKEVRF+DE+ASGKSKGY
Sbjct: 240 LFVGDLHWWTTDAELEAELCKYGQVKEVRFFDEKASGKSKGY 281


>ref|XP_004293188.1| PREDICTED: uncharacterized protein LOC101300984 [Fragaria vesca
           subsp. vesca]
          Length = 672

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 38/42 (90%), Positives = 42/42 (100%)
 Frame = +3

Query: 120 LFVGDLHWWTTDAELEAELCKYGQVKEVRFYDERASGKSKGY 245
           L+VGDLHWWTTDAELEAELCKYGQVKEV+FY+E+ASGKSKGY
Sbjct: 202 LYVGDLHWWTTDAELEAELCKYGQVKEVKFYEEKASGKSKGY 243


>ref|XP_006401427.1| hypothetical protein EUTSA_v10012809mg [Eutrema salsugineum]
           gi|557102517|gb|ESQ42880.1| hypothetical protein
           EUTSA_v10012809mg [Eutrema salsugineum]
          Length = 712

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 38/42 (90%), Positives = 41/42 (97%)
 Frame = +3

Query: 120 LFVGDLHWWTTDAELEAELCKYGQVKEVRFYDERASGKSKGY 245
           LFVGDLHWWTTDAELEAELCKYG VKEV+F+DE+ASGKSKGY
Sbjct: 237 LFVGDLHWWTTDAELEAELCKYGAVKEVKFFDEKASGKSKGY 278


>ref|XP_006280096.1| hypothetical protein CARUB_v10025989mg [Capsella rubella]
           gi|482548800|gb|EOA12994.1| hypothetical protein
           CARUB_v10025989mg [Capsella rubella]
          Length = 701

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 38/42 (90%), Positives = 41/42 (97%)
 Frame = +3

Query: 120 LFVGDLHWWTTDAELEAELCKYGQVKEVRFYDERASGKSKGY 245
           LFVGDLHWWTTDAELEAELCKYG VKEV+F+DE+ASGKSKGY
Sbjct: 231 LFVGDLHWWTTDAELEAELCKYGAVKEVKFFDEKASGKSKGY 272


>gb|EMJ14823.1| hypothetical protein PRUPE_ppa002096mg [Prunus persica]
          Length = 717

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 38/42 (90%), Positives = 41/42 (97%)
 Frame = +3

Query: 120 LFVGDLHWWTTDAELEAELCKYGQVKEVRFYDERASGKSKGY 245
           LFVGDLHWWTTDAELEAELCKYG VKEV+F+DE+ASGKSKGY
Sbjct: 246 LFVGDLHWWTTDAELEAELCKYGPVKEVKFFDEKASGKSKGY 287


>ref|NP_200378.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|9758601|dbj|BAB09234.1| unnamed protein product
           [Arabidopsis thaliana] gi|332009282|gb|AED96665.1| RNA
           recognition motif-containing protein [Arabidopsis
           thaliana]
          Length = 710

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 38/42 (90%), Positives = 41/42 (97%)
 Frame = +3

Query: 120 LFVGDLHWWTTDAELEAELCKYGQVKEVRFYDERASGKSKGY 245
           LFVGDLHWWTTDAELEAELCKYG VKEV+F+DE+ASGKSKGY
Sbjct: 236 LFVGDLHWWTTDAELEAELCKYGAVKEVKFFDEKASGKSKGY 277


>ref|NP_001190548.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|332009283|gb|AED96666.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
          Length = 585

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 38/42 (90%), Positives = 41/42 (97%)
 Frame = +3

Query: 120 LFVGDLHWWTTDAELEAELCKYGQVKEVRFYDERASGKSKGY 245
           LFVGDLHWWTTDAELEAELCKYG VKEV+F+DE+ASGKSKGY
Sbjct: 236 LFVGDLHWWTTDAELEAELCKYGAVKEVKFFDEKASGKSKGY 277


>gb|EOY12029.1| RNA-binding family protein isoform 1 [Theobroma cacao]
           gi|508720133|gb|EOY12030.1| RNA-binding family protein
           isoform 1 [Theobroma cacao] gi|508720134|gb|EOY12031.1|
           RNA-binding family protein isoform 1 [Theobroma cacao]
          Length = 709

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 37/42 (88%), Positives = 41/42 (97%)
 Frame = +3

Query: 120 LFVGDLHWWTTDAELEAELCKYGQVKEVRFYDERASGKSKGY 245
           LFVGDLHWWTTDAELE+ELCKYG VKEV+F+DE+ASGKSKGY
Sbjct: 244 LFVGDLHWWTTDAELESELCKYGPVKEVKFFDEKASGKSKGY 285


>ref|XP_004165306.1| PREDICTED: uncharacterized LOC101212980 [Cucumis sativus]
          Length = 697

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 37/42 (88%), Positives = 40/42 (95%)
 Frame = +3

Query: 120 LFVGDLHWWTTDAELEAELCKYGQVKEVRFYDERASGKSKGY 245
           LFVGDLHWWTTDAELE ELCKYG +KEV+FYDE+ASGKSKGY
Sbjct: 222 LFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGY 263


>ref|XP_004162742.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101212739
           [Cucumis sativus]
          Length = 724

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 37/42 (88%), Positives = 40/42 (95%)
 Frame = +3

Query: 120 LFVGDLHWWTTDAELEAELCKYGQVKEVRFYDERASGKSKGY 245
           LFVGDLHWWTTDAELE ELCKYG +KEV+FYDE+ASGKSKGY
Sbjct: 247 LFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGY 288


>ref|XP_004148927.1| PREDICTED: uncharacterized protein LOC101212980 [Cucumis sativus]
          Length = 697

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 37/42 (88%), Positives = 40/42 (95%)
 Frame = +3

Query: 120 LFVGDLHWWTTDAELEAELCKYGQVKEVRFYDERASGKSKGY 245
           LFVGDLHWWTTDAELE ELCKYG +KEV+FYDE+ASGKSKGY
Sbjct: 222 LFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGY 263


>ref|XP_004148926.1| PREDICTED: uncharacterized protein LOC101212739 [Cucumis sativus]
          Length = 699

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 37/42 (88%), Positives = 40/42 (95%)
 Frame = +3

Query: 120 LFVGDLHWWTTDAELEAELCKYGQVKEVRFYDERASGKSKGY 245
           LFVGDLHWWTTDAELE ELCKYG +KEV+FYDE+ASGKSKGY
Sbjct: 222 LFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGY 263


>gb|EXB36065.1| RNA-binding motif protein, X chromosome [Morus notabilis]
          Length = 687

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 37/42 (88%), Positives = 40/42 (95%)
 Frame = +3

Query: 120 LFVGDLHWWTTDAELEAELCKYGQVKEVRFYDERASGKSKGY 245
           LFVGDLHWWTTDAELE ELCKYG VKEV+F+DE+ASGKSKGY
Sbjct: 223 LFVGDLHWWTTDAELEVELCKYGPVKEVKFFDEKASGKSKGY 264


>ref|XP_002522751.1| RNA-binding protein, putative [Ricinus communis]
           gi|223537989|gb|EEF39602.1| RNA-binding protein,
           putative [Ricinus communis]
          Length = 702

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 37/42 (88%), Positives = 41/42 (97%)
 Frame = +3

Query: 120 LFVGDLHWWTTDAELEAELCKYGQVKEVRFYDERASGKSKGY 245
           LFVG+LHWWTTDAELEAELCKYG VKEV+F+DE+ASGKSKGY
Sbjct: 224 LFVGELHWWTTDAELEAELCKYGVVKEVKFFDEKASGKSKGY 265


>ref|XP_006661346.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           6-like [Oryza brachyantha]
          Length = 462

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 37/42 (88%), Positives = 41/42 (97%)
 Frame = +3

Query: 120 LFVGDLHWWTTDAELEAELCKYGQVKEVRFYDERASGKSKGY 245
           LFVG+LHWWTTDA+LEAEL KYGQVKEVRF+DE+ASGKSKGY
Sbjct: 44  LFVGELHWWTTDADLEAELSKYGQVKEVRFFDEKASGKSKGY 85


>ref|NP_001063463.1| Os09g0476100 [Oryza sativa Japonica Group]
           gi|52077336|dbj|BAD46377.1| RNA-binding protein-like
           [Oryza sativa Japonica Group]
           gi|113631696|dbj|BAF25377.1| Os09g0476100 [Oryza sativa
           Japonica Group] gi|125606072|gb|EAZ45108.1| hypothetical
           protein OsJ_29744 [Oryza sativa Japonica Group]
           gi|215712236|dbj|BAG94363.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 604

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 37/42 (88%), Positives = 41/42 (97%)
 Frame = +3

Query: 120 LFVGDLHWWTTDAELEAELCKYGQVKEVRFYDERASGKSKGY 245
           LFVG+LHWWTTDA+LEAEL KYGQVKEVRF+DE+ASGKSKGY
Sbjct: 187 LFVGELHWWTTDADLEAELSKYGQVKEVRFFDEKASGKSKGY 228


>ref|XP_002866107.1| hypothetical protein ARALYDRAFT_495654 [Arabidopsis lyrata subsp.
           lyrata] gi|297311942|gb|EFH42366.1| hypothetical protein
           ARALYDRAFT_495654 [Arabidopsis lyrata subsp. lyrata]
          Length = 706

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 36/42 (85%), Positives = 41/42 (97%)
 Frame = +3

Query: 120 LFVGDLHWWTTDAELEAELCKYGQVKEVRFYDERASGKSKGY 245
           LFVG+LHWWTTDAELEAELCKYG VKEV+F+DE+ASGKSKG+
Sbjct: 233 LFVGELHWWTTDAELEAELCKYGAVKEVKFFDEKASGKSKGF 274


>gb|EAZ09482.1| hypothetical protein OsI_31754 [Oryza sativa Indica Group]
          Length = 604

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 37/42 (88%), Positives = 41/42 (97%)
 Frame = +3

Query: 120 LFVGDLHWWTTDAELEAELCKYGQVKEVRFYDERASGKSKGY 245
           LFVG+LHWWTTDA+LEAEL KYGQVKEVRF+DE+ASGKSKGY
Sbjct: 187 LFVGELHWWTTDADLEAELSKYGQVKEVRFFDEKASGKSKGY 228


>ref|XP_004244045.1| PREDICTED: uncharacterized protein LOC101251491 [Solanum
           lycopersicum]
          Length = 697

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 37/42 (88%), Positives = 40/42 (95%)
 Frame = +3

Query: 120 LFVGDLHWWTTDAELEAELCKYGQVKEVRFYDERASGKSKGY 245
           LFVGDLHWWTTDAELEAEL KYG VKEV+F+DE+ASGKSKGY
Sbjct: 229 LFVGDLHWWTTDAELEAELSKYGHVKEVKFFDEKASGKSKGY 270


Top