BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00039269
         (289 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274352.1| PREDICTED: pentatricopeptide repeat-containi...   111   1e-22
ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containi...   109   3e-22
gb|EOY01760.1| Pentatricopeptide repeat-containing protein [Theo...   104   1e-20
gb|ESW29575.1| hypothetical protein PHAVU_002G081200g [Phaseolus...   103   2e-20
gb|EMJ23574.1| hypothetical protein PRUPE_ppa004015mg [Prunus pe...   103   2e-20
ref|XP_003614017.1| Pentatricopeptide repeat protein [Medicago t...   100   2e-19
ref|XP_004490153.1| PREDICTED: pentatricopeptide repeat-containi...   100   3e-19
gb|EXB65077.1| hypothetical protein L484_004253 [Morus notabilis]      95   8e-18
ref|XP_002465797.1| hypothetical protein SORBIDRAFT_01g045970 [S...    92   5e-17
ref|XP_004157334.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    92   7e-17
ref|XP_004143828.1| PREDICTED: pentatricopeptide repeat-containi...    92   7e-17
ref|XP_006344328.1| PREDICTED: pentatricopeptide repeat-containi...    92   9e-17
ref|XP_004237221.1| PREDICTED: pentatricopeptide repeat-containi...    91   1e-16
gb|EXB53748.1| hypothetical protein L484_022405 [Morus notabilis]      91   2e-16
gb|AFW89565.1| hypothetical protein ZEAMMB73_426720 [Zea mays]         91   2e-16
ref|NP_001146230.1| uncharacterized protein LOC100279802 [Zea ma...    91   2e-16
gb|EMJ26738.1| hypothetical protein PRUPE_ppa026705mg [Prunus pe...    88   1e-15
ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containi...    88   1e-15
ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containi...    88   1e-15
emb|CBI35966.3| unnamed protein product [Vitis vinifera]               88   1e-15

>ref|XP_002274352.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 536

 Score =  111 bits (277), Expect = 1e-22
 Identities = 54/96 (56%), Positives = 70/96 (72%)
 Frame = -2

Query: 288 YTLPYVLKACAGLKDAVAGAQVHAHTIKLGFFADTFVCNTLALVCFACGGDAVSARQVFD 109
           YTLPYVLKACAGL+    G   H  ++KLGF+ D FV NTL +  ++  G+  +AR +FD
Sbjct: 106 YTLPYVLKACAGLQSCHLGESAHGQSVKLGFWFDIFVGNTL-IAMYSSFGNVRAARCIFD 164

Query: 108 GIPQRDAVSWTVMISGYGQLGDVENARLLFDESPLK 1
            +P   AVSWTVMISGY ++GDVE AR+LFDE+P+K
Sbjct: 165 EMPWHTAVSWTVMISGYAKVGDVETARMLFDEAPMK 200


>ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Glycine max]
          Length = 518

 Score =  109 bits (273), Expect = 3e-22
 Identities = 53/96 (55%), Positives = 69/96 (71%)
 Frame = -2

Query: 288 YTLPYVLKACAGLKDAVAGAQVHAHTIKLGFFADTFVCNTLALVCFACGGDAVSARQVFD 109
           YT+PYVLKACA L+D   G  VH ++ KLG   D FV N+L  +   CG D ++AR VFD
Sbjct: 106 YTIPYVLKACAALRDCSLGKMVHGYSSKLGLVFDIFVGNSLMAMYSVCG-DVIAARHVFD 164

Query: 108 GIPQRDAVSWTVMISGYGQLGDVENARLLFDESPLK 1
            +P+  AVSW+VMISGY ++GDV++ARL FDE+P K
Sbjct: 165 EMPRLSAVSWSVMISGYAKVGDVDSARLFFDEAPEK 200


>gb|EOY01760.1| Pentatricopeptide repeat-containing protein [Theobroma cacao]
          Length = 523

 Score =  104 bits (259), Expect = 1e-20
 Identities = 56/97 (57%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
 Frame = -2

Query: 288 YTLPYVLKACAGLKDAVAGAQVHAHTIKLGFFADTFVCNTLALVCFACGGDAVS-ARQVF 112
           YTLPYVLKACA L+    G  V+ H +KLGF  D FV N  AL+   C  D V  AR +F
Sbjct: 106 YTLPYVLKACAKLQYFYFGELVYGHCLKLGFVFDIFVGN--ALIAMFCAFDNVKVARYIF 163

Query: 111 DGIPQRDAVSWTVMISGYGQLGDVENARLLFDESPLK 1
           D IP  D VSWTVMISGYG++GD++ ARLLFDE+ +K
Sbjct: 164 DEIPWPDFVSWTVMISGYGKIGDIDTARLLFDEASVK 200


>gb|ESW29575.1| hypothetical protein PHAVU_002G081200g [Phaseolus vulgaris]
          Length = 517

 Score =  103 bits (258), Expect = 2e-20
 Identities = 53/96 (55%), Positives = 65/96 (67%)
 Frame = -2

Query: 288 YTLPYVLKACAGLKDAVAGAQVHAHTIKLGFFADTFVCNTLALVCFACGGDAVSARQVFD 109
           YT PYVLKACA L     G  VH ++ K G   D FV N+L  +   CG D V+AR VFD
Sbjct: 106 YTTPYVLKACAALHSRSLGQMVHGYSSKAGLVYDIFVGNSLMAMYSVCG-DVVAARYVFD 164

Query: 108 GIPQRDAVSWTVMISGYGQLGDVENARLLFDESPLK 1
            IP+  AVSW+VMISGY ++GDV++ARL FDE+P K
Sbjct: 165 EIPRLSAVSWSVMISGYAKVGDVDSARLFFDEAPEK 200


>gb|EMJ23574.1| hypothetical protein PRUPE_ppa004015mg [Prunus persica]
          Length = 535

 Score =  103 bits (257), Expect = 2e-20
 Identities = 51/96 (53%), Positives = 68/96 (70%)
 Frame = -2

Query: 288 YTLPYVLKACAGLKDAVAGAQVHAHTIKLGFFADTFVCNTLALVCFACGGDAVSARQVFD 109
           YTLPYVLKACA L+ +  G  VH  ++KLGF +D FV N+L +V +    D  +AR +FD
Sbjct: 110 YTLPYVLKACARLQSSCLGELVHGCSLKLGFVSDIFVGNSL-IVMYCAFDDMKAARHIFD 168

Query: 108 GIPQRDAVSWTVMISGYGQLGDVENARLLFDESPLK 1
            IP   AVSWTVMISG+ + GD++ ARL FDE+P++
Sbjct: 169 EIPSLSAVSWTVMISGHSKAGDLDTARLFFDEAPVR 204


>ref|XP_003614017.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355515352|gb|AES96975.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 525

 Score =  100 bits (250), Expect = 2e-19
 Identities = 49/96 (51%), Positives = 65/96 (67%)
 Frame = -2

Query: 288 YTLPYVLKACAGLKDAVAGAQVHAHTIKLGFFADTFVCNTLALVCFACGGDAVSARQVFD 109
           YT+PYVLKAC    D   G  +H ++ KLG   D +V N+L +  +   GD V+AR VFD
Sbjct: 108 YTIPYVLKACGTFHDCSFGKMIHGYSSKLGLVFDIYVGNSL-MAMYCVFGDVVAARYVFD 166

Query: 108 GIPQRDAVSWTVMISGYGQLGDVENARLLFDESPLK 1
            IP  + VSW+VMISGY ++GDV++ARL FDE+P K
Sbjct: 167 EIPSLNVVSWSVMISGYAKVGDVDSARLFFDEAPEK 202


>ref|XP_004490153.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Cicer arietinum]
          Length = 523

 Score =  100 bits (248), Expect = 3e-19
 Identities = 52/96 (54%), Positives = 65/96 (67%)
 Frame = -2

Query: 288 YTLPYVLKACAGLKDAVAGAQVHAHTIKLGFFADTFVCNTLALVCFACGGDAVSARQVFD 109
           YT+PYVLKACA L D   G  VH +  KLG   D FV N+L +  +   GD V+AR VFD
Sbjct: 108 YTVPYVLKACAALHDCSLGKLVHGYGSKLGLVFDIFVGNSL-MSMYVVFGDVVAARYVFD 166

Query: 108 GIPQRDAVSWTVMISGYGQLGDVENARLLFDESPLK 1
            IP    VSW+VMISGY ++G+V++ARL FDE+P K
Sbjct: 167 EIPCLSLVSWSVMISGYAKMGNVDSARLFFDEAPEK 202


>gb|EXB65077.1| hypothetical protein L484_004253 [Morus notabilis]
          Length = 508

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 48/96 (50%), Positives = 65/96 (67%)
 Frame = -2

Query: 288 YTLPYVLKACAGLKDAVAGAQVHAHTIKLGFFADTFVCNTLALVCFACGGDAVSARQVFD 109
           YTLPYVLKAC+ L+ A  G  VH H +K G   D FV N+L +V ++   +  +ARQVFD
Sbjct: 90  YTLPYVLKACSRLQSACLGVSVHGHGLKSGLAFDLFVGNSL-IVMYSEFRNMEAARQVFD 148

Query: 108 GIPQRDAVSWTVMISGYGQLGDVENARLLFDESPLK 1
            +P    VSW VMISGYG++G+V+  RL FD +P++
Sbjct: 149 EMPSLSTVSWMVMISGYGKVGEVDKERLFFDLAPVR 184


>ref|XP_002465797.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
           gi|241919651|gb|EER92795.1| hypothetical protein
           SORBIDRAFT_01g045970 [Sorghum bicolor]
          Length = 531

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 47/95 (49%), Positives = 63/95 (66%)
 Frame = -2

Query: 285 TLPYVLKACAGLKDAVAGAQVHAHTIKLGFFADTFVCNTLALVCFACGGDAVSARQVFDG 106
           T P+VL+ACA +  +  GAQVHAH +K G  +D FV N L  +   CG D  +A  +FDG
Sbjct: 116 TFPFVLRACAAMGASETGAQVHAHVVKAGCESDAFVRNALIGMHATCG-DLGAAAALFDG 174

Query: 105 IPQRDAVSWTVMISGYGQLGDVENARLLFDESPLK 1
             + DAV+W+ MISG+ + GD+  AR LFDESP+K
Sbjct: 175 EAREDAVAWSAMISGFARRGDIGAARELFDESPVK 209


>ref|XP_004157334.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g20540-like [Cucumis sativus]
          Length = 532

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 51/96 (53%), Positives = 64/96 (66%)
 Frame = -2

Query: 288 YTLPYVLKACAGLKDAVAGAQVHAHTIKLGFFADTFVCNTLALVCFACGGDAVSARQVFD 109
           YTLPYVLKA A + +   G  +HA TIKLG   + FV N+L LV +    +  SARQVFD
Sbjct: 106 YTLPYVLKASARMTNIHLGESIHACTIKLGSAVNEFVGNSL-LVMYRSFDNMRSARQVFD 164

Query: 108 GIPQRDAVSWTVMISGYGQLGDVENARLLFDESPLK 1
            +P+  AVSWTVMI GY  +GDV+ AR LFD + +K
Sbjct: 165 EMPELSAVSWTVMIYGYANMGDVDTARELFDMATVK 200


>ref|XP_004143828.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Cucumis sativus]
          Length = 532

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 51/96 (53%), Positives = 64/96 (66%)
 Frame = -2

Query: 288 YTLPYVLKACAGLKDAVAGAQVHAHTIKLGFFADTFVCNTLALVCFACGGDAVSARQVFD 109
           YTLPYVLKA A + +   G  +HA TIKLG   + FV N+L LV +    +  SARQVFD
Sbjct: 106 YTLPYVLKASARMTNIHLGESIHACTIKLGSAVNEFVGNSL-LVMYRSFDNMRSARQVFD 164

Query: 108 GIPQRDAVSWTVMISGYGQLGDVENARLLFDESPLK 1
            +P+  AVSWTVMI GY  +GDV+ AR LFD + +K
Sbjct: 165 EMPELSAVSWTVMIYGYANMGDVDTARELFDMATVK 200


>ref|XP_006344328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Solanum tuberosum]
          Length = 530

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 49/96 (51%), Positives = 60/96 (62%)
 Frame = -2

Query: 288 YTLPYVLKACAGLKDAVAGAQVHAHTIKLGFFADTFVCNTLALVCFACGGDAVSARQVFD 109
           YTLPYVLKAC  +K    G  VH   +KLGF  DTFV N+L +  + C  +  +AR VF 
Sbjct: 108 YTLPYVLKACGRMKSFHLGELVHGQILKLGFLIDTFVGNSL-IGFYTCFDNVEAARSVFY 166

Query: 108 GIPQRDAVSWTVMISGYGQLGDVENARLLFDESPLK 1
            IP    VSWTV+I GY + GDV  ARL+FDE  +K
Sbjct: 167 EIPCNCVVSWTVLICGYAKTGDVYEARLIFDECLVK 202


>ref|XP_004237221.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Solanum lycopersicum]
          Length = 586

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 49/96 (51%), Positives = 60/96 (62%)
 Frame = -2

Query: 288 YTLPYVLKACAGLKDAVAGAQVHAHTIKLGFFADTFVCNTLALVCFACGGDAVSARQVFD 109
           YTLPYVLKAC  +K    G  VH   +KLGF  DTFV N+L +  + C  +  +AR VF 
Sbjct: 108 YTLPYVLKACGRMKSLHLGELVHGQILKLGFLIDTFVGNSL-IGFYTCFDNVEAARSVFY 166

Query: 108 GIPQRDAVSWTVMISGYGQLGDVENARLLFDESPLK 1
            IP    VSWTV+I GY + GDV  ARL+FDE  +K
Sbjct: 167 EIPCNCVVSWTVLICGYAKRGDVYEARLVFDECLVK 202


>gb|EXB53748.1| hypothetical protein L484_022405 [Morus notabilis]
          Length = 531

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 47/96 (48%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
 Frame = -2

Query: 288 YTLPYVLKACAGLKD--AVAGAQVHAHTIKLGFFADTFVCNTLALVCFACGGDAVSARQV 115
           YT P ++KAC  L D   + G  VHAH +K GF  D FV   L     +  GD V+AR V
Sbjct: 113 YTFPPLIKACTILDDNSEITGRLVHAHVVKFGFRDDPFVSTALIEFYSSVVGDMVTARSV 172

Query: 114 FDGIPQRDAVSWTVMISGYGQLGDVENARLLFDESP 7
           FD  P+RD V WT M  GYG++GDV  AR +FDE P
Sbjct: 173 FDECPKRDVVLWTAMADGYGKVGDVGRAREVFDEMP 208


>gb|AFW89565.1| hypothetical protein ZEAMMB73_426720 [Zea mays]
          Length = 537

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 47/95 (49%), Positives = 62/95 (65%)
 Frame = -2

Query: 285 TLPYVLKACAGLKDAVAGAQVHAHTIKLGFFADTFVCNTLALVCFACGGDAVSARQVFDG 106
           T P+VL+ACA +     GAQVHAH +K G  +D FV N L +   A  GD  +A  +FDG
Sbjct: 117 TFPFVLRACAAMGAGETGAQVHAHVVKAGCESDAFVRNAL-IGMHATLGDLGAAAALFDG 175

Query: 105 IPQRDAVSWTVMISGYGQLGDVENARLLFDESPLK 1
             + DAV+W+ MISG+ + GD+  AR LFDESP+K
Sbjct: 176 EAREDAVAWSAMISGFARRGDIGAARELFDESPVK 210


>ref|NP_001146230.1| uncharacterized protein LOC100279802 [Zea mays]
           gi|219886289|gb|ACL53519.1| unknown [Zea mays]
          Length = 537

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 47/95 (49%), Positives = 62/95 (65%)
 Frame = -2

Query: 285 TLPYVLKACAGLKDAVAGAQVHAHTIKLGFFADTFVCNTLALVCFACGGDAVSARQVFDG 106
           T P+VL+ACA +     GAQVHAH +K G  +D FV N L +   A  GD  +A  +FDG
Sbjct: 117 TFPFVLRACAAMGAGETGAQVHAHVVKAGCESDAFVRNAL-IGMHATLGDLGAAAALFDG 175

Query: 105 IPQRDAVSWTVMISGYGQLGDVENARLLFDESPLK 1
             + DAV+W+ MISG+ + GD+  AR LFDESP+K
Sbjct: 176 EAREDAVAWSAMISGFARRGDIGAARELFDESPVK 210


>gb|EMJ26738.1| hypothetical protein PRUPE_ppa026705mg [Prunus persica]
          Length = 484

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 44/92 (47%), Positives = 57/92 (61%)
 Frame = -2

Query: 288 YTLPYVLKACAGLKDAVAGAQVHAHTIKLGFFADTFVCNTLALVCFACGGDAVSARQVFD 109
           +T P+VLKACAGL D   G  VH   +K GF  D  VCNT+  +   C G   SAR+VFD
Sbjct: 11  FTYPFVLKACAGLGDLNLGTSVHGSVVKFGFDDDVHVCNTMVHMYCCCSGGIESARKVFD 70

Query: 108 GIPQRDAVSWTVMISGYGQLGDVENARLLFDE 13
            +P+ D+VSW+ MI GY ++G   +A  LF E
Sbjct: 71  EMPKLDSVSWSAMIGGYVRVGWSTDAVDLFRE 102


>ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
           gi|449504924|ref|XP_004162332.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 595

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 47/96 (48%), Positives = 59/96 (61%)
 Frame = -2

Query: 288 YTLPYVLKACAGLKDAVAGAQVHAHTIKLGFFADTFVCNTLALVCFACGGDAVSARQVFD 109
           YT P++L+AC  L       QVH   IKLGF +D F  N L  V   CG +   ARQ+FD
Sbjct: 89  YTFPFLLRACRNLLAMGEALQVHGLVIKLGFGSDVFALNALLHVYALCG-EIHCARQLFD 147

Query: 108 GIPQRDAVSWTVMISGYGQLGDVENARLLFDESPLK 1
            IP+RDAVSW +MI GY + GDV+ A  +F + PLK
Sbjct: 148 NIPERDAVSWNIMIDGYIKSGDVKTAYGVFLDMPLK 183


>ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
           gi|449529868|ref|XP_004171920.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 44/96 (45%), Positives = 64/96 (66%)
 Frame = -2

Query: 288 YTLPYVLKACAGLKDAVAGAQVHAHTIKLGFFADTFVCNTLALVCFACGGDAVSARQVFD 109
           YT P++LK+CA L  A  G Q+HAH +KLGF +D F+ +T  +  +A  G+  +A+ VFD
Sbjct: 130 YTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFI-HTSLINMYAQSGEMNNAQLVFD 188

Query: 108 GIPQRDAVSWTVMISGYGQLGDVENARLLFDESPLK 1
               RDA+S+T +I+GY   G ++ AR LFDE P+K
Sbjct: 189 QSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVK 224


>emb|CBI35966.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 45/96 (46%), Positives = 61/96 (63%)
 Frame = -2

Query: 288 YTLPYVLKACAGLKDAVAGAQVHAHTIKLGFFADTFVCNTLALVCFACGGDAVSARQVFD 109
           +T P+VLKAC+ L   + G Q+H H ++LGF +D FVCN+L  +   C     SAR  +D
Sbjct: 94  FTFPFVLKACSTLGSVLEGEQIHTHVLRLGFGSDLFVCNSLIDMYCKC-FRLDSARNFWD 152

Query: 108 GIPQRDAVSWTVMISGYGQLGDVENARLLFDESPLK 1
            +  RD VSW  +ISGY Q G VE AR LF+E P++
Sbjct: 153 DMGFRDEVSWNSIISGYVQWGQVEKARDLFEEMPMR 188