BLASTX nr result
ID: Zingiber23_contig00039262
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00039262
(630 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_008854652.1| hypothetical chloroplast RF19 [Curcuma rosco... 332 4e-89
gb|AGE93428.1| hypothetical chloroplast RF19 [Alpinia zerumbet] 322 6e-86
ref|YP_007475762.1| hypothetical chloroplast RF19 [Zingiber spec... 318 6e-85
gb|AHA13068.1| hypothetical chloroplast RF19 [Costus pulverulentus] 197 2e-48
gb|AHA12982.1| hypothetical chloroplast RF19 [Monocostus uniflorus] 187 2e-45
gb|AHA13240.1| hypothetical chloroplast RF19 [Thaumatococcus dan... 181 2e-43
gb|AHH24272.1| hypothetical chloroplast protein ycf1, partial (c... 161 2e-37
gb|AHA12813.1| hypothetical chloroplast RF19 [Canna indica] 160 2e-37
gb|AGE93256.1| hypothetical chloroplast RF19 [Calectasia narragara] 158 1e-36
ref|YP_008854483.1| hypothetical chloroplast RF19 [Musa textilis... 155 9e-36
gb|AHA12896.1| hypothetical chloroplast RF19 [Maranta leuconeura] 154 2e-35
ref|YP_003434033.1| hypothetical chloroplast RF19 [Typha latifol... 154 3e-35
ref|YP_003540991.1| hypothetical chloroplast RF1 [Phoenix dactyl... 151 1e-34
ref|YP_740260.1| hypothetical chloroplast RF1 [Liriodendron tuli... 151 2e-34
ref|YP_008081424.1| hypothetical chloroplast RF1 (chloroplast) [... 150 4e-34
ref|YP_007476106.1| hypothetical chloroplast RF19 [Dasypogon bro... 150 4e-34
gb|AFM83351.1| hypothetical chloroplast RF19 (chloroplast) [King... 149 6e-34
ref|YP_008993234.1| hypothetical chloroplast RF19 (chloroplast) ... 148 1e-33
ref|YP_008993922.1| hypothetical chloroplast RF19 (chloroplast) ... 147 2e-33
ref|YP_004769771.1| hypothetical chloroplast RF19 [Magnolia kwan... 147 2e-33
>ref|YP_008854652.1| hypothetical chloroplast RF19 [Curcuma roscoeana]
gi|557637559|gb|AHA13154.1| hypothetical chloroplast RF19
[Curcuma roscoeana]
Length = 1815
Score = 332 bits (852), Expect = 4e-89
Identities = 176/209 (84%), Positives = 176/209 (84%)
Frame = +3
Query: 3 INSLTSIDQLSFEYIPNSHLKKSSLLEEEIKRNSENKAKSLKSVFDXXXXXXXXXXXXXX 182
INSLTSIDQLSFEYIPNSHLKKSSLLEEEIK NSENKAKSLKSVFD
Sbjct: 519 INSLTSIDQLSFEYIPNSHLKKSSLLEEEIKINSENKAKSLKSVFDIITTNGEEIIEEGE 578
Query: 183 XXXXXXXXQKIPQRLYKLTEELEVLAQXXXXXXXXXQLMKQDQEIRTRKARRVVIYTDYS 362
QKIPQRLYKLTEELE LAQ QLMKQDQEIRTRKARRVVIYTDYS
Sbjct: 579 EILKEKIIQKIPQRLYKLTEELEALAQDEDEEDEHEQLMKQDQEIRTRKARRVVIYTDYS 638
Query: 363 VNPETNDDEINELALIRYSQQPDFRRGLIKGSLRAQRRKTVIWNTFQAYVNSPLFFDRVE 542
VNPETNDDEINELALIRYSQQPDFRRGLIKGSLRAQRRKTVIWNTFQAYVNSPLFFDRVE
Sbjct: 639 VNPETNDDEINELALIRYSQQPDFRRGLIKGSLRAQRRKTVIWNTFQAYVNSPLFFDRVE 698
Query: 543 NIFFFSLLNKIDQNIKSIFRNFAKKKPKT 629
NIFFFSLLNKIDQNIKSIFRNFAKKKPKT
Sbjct: 699 NIFFFSLLNKIDQNIKSIFRNFAKKKPKT 727
>gb|AGE93428.1| hypothetical chloroplast RF19 [Alpinia zerumbet]
Length = 1795
Score = 322 bits (825), Expect = 6e-86
Identities = 170/209 (81%), Positives = 174/209 (83%)
Frame = +3
Query: 3 INSLTSIDQLSFEYIPNSHLKKSSLLEEEIKRNSENKAKSLKSVFDXXXXXXXXXXXXXX 182
INSLTSIDQLSFEYIPNSHLKKSSLLEEEI+ NSENKAKSLKSVFD
Sbjct: 519 INSLTSIDQLSFEYIPNSHLKKSSLLEEEIQINSENKAKSLKSVFDIITTNGEEIIEEGE 578
Query: 183 XXXXXXXXQKIPQRLYKLTEELEVLAQXXXXXXXXXQLMKQDQEIRTRKARRVVIYTDYS 362
QKIP+RLYKLTEELE LAQ +LMKQDQEIRTRKARRVVIYTDYS
Sbjct: 579 EILKEKIIQKIPRRLYKLTEELEALAQDEDEEDEHEELMKQDQEIRTRKARRVVIYTDYS 638
Query: 363 VNPETNDDEINELALIRYSQQPDFRRGLIKGSLRAQRRKTVIWNTFQAYVNSPLFFDRVE 542
VNPETNDDEINELALIRYSQQPDFRRGLIKGSLRA+RRKTVIWNTFQAYVNSPLF DRVE
Sbjct: 639 VNPETNDDEINELALIRYSQQPDFRRGLIKGSLRAKRRKTVIWNTFQAYVNSPLFLDRVE 698
Query: 543 NIFFFSLLNKIDQNIKSIFRNFAKKKPKT 629
NIFFFSLLNKIDQNIKSIFRN AKKKPKT
Sbjct: 699 NIFFFSLLNKIDQNIKSIFRNLAKKKPKT 727
>ref|YP_007475762.1| hypothetical chloroplast RF19 [Zingiber spectabile]
gi|449326242|gb|AGE92827.1| hypothetical chloroplast RF19
[Zingiber spectabile]
Length = 1817
Score = 318 bits (816), Expect = 6e-85
Identities = 172/216 (79%), Positives = 174/216 (80%), Gaps = 7/216 (3%)
Frame = +3
Query: 3 INSLTSIDQLSFEYIPNSHLKKSSLLEEEIKRNSENKAKSLKSVFDXXXXXXXXXXXXXX 182
INSLTSIDQLSFEYIPNSHLKKSSLLEEEIKRNSENKAKSLKSVFD
Sbjct: 521 INSLTSIDQLSFEYIPNSHLKKSSLLEEEIKRNSENKAKSLKSVFDIITTNGEEIIEEGE 580
Query: 183 XXXXXXXX-------QKIPQRLYKLTEELEVLAQXXXXXXXXXQLMKQDQEIRTRKARRV 341
QKIPQRLYKLTEELEVLAQ QLMK+DQEIRTRKARRV
Sbjct: 581 EILKEGEEILKEKIIQKIPQRLYKLTEELEVLAQDEDEEDEHEQLMKEDQEIRTRKARRV 640
Query: 342 VIYTDYSVNPETNDDEINELALIRYSQQPDFRRGLIKGSLRAQRRKTVIWNTFQAYVNSP 521
VIYTDYSVN ETNDDEINELALI YS+QPDF RGLIKGSLRAQRRKTVIWNTFQAYVNSP
Sbjct: 641 VIYTDYSVNTETNDDEINELALIHYSEQPDFHRGLIKGSLRAQRRKTVIWNTFQAYVNSP 700
Query: 522 LFFDRVENIFFFSLLNKIDQNIKSIFRNFAKKKPKT 629
LFFDRVENIFFFSLLNKIDQNIK IFRNFAKKKPKT
Sbjct: 701 LFFDRVENIFFFSLLNKIDQNIKFIFRNFAKKKPKT 736
>gb|AHA13068.1| hypothetical chloroplast RF19 [Costus pulverulentus]
Length = 1825
Score = 197 bits (501), Expect = 2e-48
Identities = 112/211 (53%), Positives = 140/211 (66%), Gaps = 3/211 (1%)
Frame = +3
Query: 3 INSLTSIDQLSFEYIPNSHLKKSSLLEEEIKRNSENKAKSLKSVFDXXXXXXXXXXXXXX 182
+NSLTSID+ SFE +P+ HLKKSS LEEE K NSE+KAKSLK VFD
Sbjct: 573 VNSLTSIDEFSFESVPSFHLKKSSSLEEERKMNSESKAKSLKYVFDIITTNPNDQTRTIN 632
Query: 183 XXXXXXXXQKIPQRLYKLTEELEVLAQXXXXXXXXXQLMKQDQEIRTRKARRVVIYTDYS 362
+KIP+ YKLT+ELE + + +K+D EIR+RKA+RVV+YTD +
Sbjct: 633 KSIEEEIIKKIPRWSYKLTDELEEQDEENE------EQLKEDHEIRSRKAKRVVVYTDKN 686
Query: 363 VNPETNDDEIN---ELALIRYSQQPDFRRGLIKGSLRAQRRKTVIWNTFQAYVNSPLFFD 533
N TN + I+ E+ALIRYSQQPDFRR +IKGS+RAQRRKTVIW FQA V+SPLF D
Sbjct: 687 DNSNTNVNNIDPEEEVALIRYSQQPDFRRSIIKGSMRAQRRKTVIWEIFQANVHSPLFLD 746
Query: 534 RVENIFFFSLLNKIDQNIKSIFRNFAKKKPK 626
R++ FFFS + I Q I FRN ++KP+
Sbjct: 747 RIDKAFFFSFFD-IYQMINLFFRNSVRRKPE 776
>gb|AHA12982.1| hypothetical chloroplast RF19 [Monocostus uniflorus]
Length = 1842
Score = 187 bits (476), Expect = 2e-45
Identities = 109/211 (51%), Positives = 137/211 (64%), Gaps = 3/211 (1%)
Frame = +3
Query: 3 INSLTSIDQLSFEYIPNSHLKKSSLLEEEIKRNSENKAKSLKSVFDXXXXXXXXXXXXXX 182
+NSLTSID+ SFE +P+ HLKKSS LEEE K NSE+KAKSLK VFD
Sbjct: 572 VNSLTSIDEFSFESVPSFHLKKSSKLEEERKMNSESKAKSLKYVFDIITTNPNDQTRTIN 631
Query: 183 XXXXXXXXQKIPQRLYKLTEELEVLAQXXXXXXXXXQLMKQDQEIRTRKARRVVIYTDYS 362
+KIP+ YKLT+ELE + + +K+D EIR+RKA+RVV+YTD +
Sbjct: 632 KSIEEEIIKKIPRWSYKLTDELEEQDEENE------EQLKEDHEIRSRKAKRVVVYTDKN 685
Query: 363 VNPETNDDEIN---ELALIRYSQQPDFRRGLIKGSLRAQRRKTVIWNTFQAYVNSPLFFD 533
N TN + I+ E+ALIRYSQQPDFRR +IKGS+RAQRRKTVI FQA V+SPLF D
Sbjct: 686 DNSNTNVNNIDQEEEIALIRYSQQPDFRRSIIKGSMRAQRRKTVILEIFQANVHSPLFLD 745
Query: 534 RVENIFFFSLLNKIDQNIKSIFRNFAKKKPK 626
R++ + FF I Q I FRN ++KP+
Sbjct: 746 RIDKVSFFD----IYQMIHLFFRNSVRRKPE 772
>gb|AHA13240.1| hypothetical chloroplast RF19 [Thaumatococcus daniellii]
Length = 1874
Score = 181 bits (459), Expect = 2e-43
Identities = 109/216 (50%), Positives = 132/216 (61%), Gaps = 10/216 (4%)
Frame = +3
Query: 3 INSLTSIDQLSFEYIPNSHLKKSSLLE--EEIKRNSENKAKSLKSVFDXXXXXXXXXXXX 176
+NSLTSID+LSFE +P+ H KKSSLLE EE K N E+K K K VFD
Sbjct: 576 VNSLTSIDELSFESVPSFHFKKSSLLELEEERKINLESKTKYFKFVFDIITTNQNDQTIT 635
Query: 177 XXXXXXXXXXQKIPQRLYKLTEELEVLAQXXXXXXXXXQLMKQDQEIRTRKARRVVIYTD 356
+KIP+ YKLT+ELE+ Q + K+D EIR+RKA+RVVIYTD
Sbjct: 636 REESIGEEIIKKIPRWSYKLTDELEI--QDQEKETETEEQTKEDPEIRSRKAKRVVIYTD 693
Query: 357 YSVNPET--------NDDEINELALIRYSQQPDFRRGLIKGSLRAQRRKTVIWNTFQAYV 512
+ N ++ N DE E+ALIRYSQQPDFRRG+IKGS+RAQRRKTV W FQ +
Sbjct: 694 NNQNTDSYNNLDIIDNIDEAEEIALIRYSQQPDFRRGIIKGSMRAQRRKTVTWELFQTDI 753
Query: 513 NSPLFFDRVENIFFFSLLNKIDQNIKSIFRNFAKKK 620
+SPLFFDR + FFFS I Q I FRN +K
Sbjct: 754 HSPLFFDREDKAFFFSFF-YIYQMINLFFRNSVGRK 788
>gb|AHH24272.1| hypothetical chloroplast protein ycf1, partial (chloroplast)
[Japonolirion osense]
Length = 1537
Score = 161 bits (407), Expect = 2e-37
Identities = 100/216 (46%), Positives = 129/216 (59%), Gaps = 9/216 (4%)
Frame = +3
Query: 6 NSLTSIDQLSFEYIPNSHLKKSSLLEEEIKRNSENKAKSLKSVFDXXXXXXXXXXXXXXX 185
NSLTSID+LSFE P+ + KK SLL E+ K NSE+KAK LK +FD
Sbjct: 219 NSLTSIDELSFESAPSFNFKKFSLLAEQKKMNSESKAKCLKFLFDVITTGSNDQTIIRNK 278
Query: 186 XXXXXXXQKIPQRL-YKLTEELEVLAQXXXXXXXXXQLMKQDQEIRTRKARRVVIYTDY- 359
+K R YKLT++ + Q + +D EIR+RKA+RVVIYTD
Sbjct: 279 SSGIEEIRKKVSRWSYKLTDDGVLEEQEEENE----EESTEDPEIRSRKAKRVVIYTDND 334
Query: 360 -------SVNPETNDDEINELALIRYSQQPDFRRGLIKGSLRAQRRKTVIWNTFQAYVNS 518
S N N+D+ E+ALIRYSQQ DFRR +IKGS+RAQRRKTV W FQA V+S
Sbjct: 335 QNTNSITSTNNTGNNDQAEEVALIRYSQQSDFRRDIIKGSMRAQRRKTVTWEIFQANVHS 394
Query: 519 PLFFDRVENIFFFSLLNKIDQNIKSIFRNFAKKKPK 626
PLF DR++ FFFS I + + IFRN+ +++P+
Sbjct: 395 PLFLDRIDKTFFFSF--DISEMMNLIFRNWVRREPE 428
>gb|AHA12813.1| hypothetical chloroplast RF19 [Canna indica]
Length = 1803
Score = 160 bits (406), Expect = 2e-37
Identities = 106/237 (44%), Positives = 132/237 (55%), Gaps = 29/237 (12%)
Frame = +3
Query: 3 INSLTSIDQLSFEYIPNSHLKKSSLLEEEIKRNSENKAKSLKSVFDXXXXXXXXXXXXXX 182
+NSLTSI++LSFE IP+ HLK +EEE K NSE+KAKSLK VFD
Sbjct: 572 VNSLTSINELSFESIPSFHLK----MEEEKKMNSESKAKSLKLVFDIITTDANDQTRTKE 627
Query: 183 XXXXXXXX----------QKIPQRLYKLTEELEVLAQXXXXXXXXXQLMKQDQEIRTRKA 332
+K+P+ YKL ELE AQ + K+D EIR+RKA
Sbjct: 628 ESIGEESIGEESIEEEIIKKVPRWSYKLINELE--AQEQERDEETEEQAKEDPEIRSRKA 685
Query: 333 RRVVIYTDYSVNPETN---------------DDEINE---LALIRYSQQPDFRRGLIKGS 458
++VVIYTD N +TN DD I+E + LIRYSQQPDFRR +IKGS
Sbjct: 686 KQVVIYTDKKKNTDTNIWNSNTNIRNTNTNIDDNIDEEEEVTLIRYSQQPDFRRAIIKGS 745
Query: 459 LRAQRRKTVIWNTFQAYVNSPLFFDRVENIFFFSLLN-KIDQNIKSIFRNFAKKKPK 626
+RAQRRKT+IW FQA SPLF DR + + FFS + + Q I FRN +KP+
Sbjct: 746 MRAQRRKTIIWELFQANPRSPLFLDREDKLLFFSFFDIYLYQMINLNFRNSVGRKPE 802
>gb|AGE93256.1| hypothetical chloroplast RF19 [Calectasia narragara]
Length = 1795
Score = 158 bits (400), Expect = 1e-36
Identities = 99/210 (47%), Positives = 129/210 (61%), Gaps = 10/210 (4%)
Frame = +3
Query: 6 NSLTSIDQLSFEYIPNSHLKKSSLLEEEIKRNSENKAKSLKSVFDXXXXXXXXXXXXXXX 185
NSL SI++ SF+YIP+ HLKK SL EE+ K +S+NKAKSLK +FD
Sbjct: 516 NSLPSIEKFSFDYIPSFHLKKRSLSEEQRKIDSKNKAKSLKFIFDVITTHSNDQRTIRNE 575
Query: 186 XXXXXXX-QKIPQRLYKLTEELEVLAQXXXXXXXXXQLMKQDQEIRTRKARRVVIYTD-- 356
+K+P+ YKLT +LE + + +D EIR+RKA+ VVIYTD
Sbjct: 576 FIGIEKVIKKVPRWSYKLTNDLEEQEEENE------EESTEDHEIRSRKAKLVVIYTDND 629
Query: 357 ----YSVNPET---NDDEINELALIRYSQQPDFRRGLIKGSLRAQRRKTVIWNTFQAYVN 515
YS T N D++ E+ALIRYSQQ DFRR +KGS+RAQRRKTVIW FQA V+
Sbjct: 630 QNTNYSTTNNTSTSNSDQVEEVALIRYSQQSDFRRDTVKGSMRAQRRKTVIWEMFQANVH 689
Query: 516 SPLFFDRVENIFFFSLLNKIDQNIKSIFRN 605
SPLF DR++ F F +++I +NI IF+N
Sbjct: 690 SPLFLDRIDKTFAFFEISEI-KNI--IFKN 716
>ref|YP_008854483.1| hypothetical chloroplast RF19 [Musa textilis]
gi|557636970|gb|AHA12572.1| hypothetical chloroplast RF19
[Musa textilis]
Length = 1901
Score = 155 bits (392), Expect = 9e-36
Identities = 93/193 (48%), Positives = 124/193 (64%), Gaps = 10/193 (5%)
Frame = +3
Query: 24 DQLSFEYIPN--SHLKKSSL--LEEEIKRNSENKAKSLKSVFDXXXXXXXXXXXXXXXXX 191
++ SF YI N + + +SSL LEEE + NSE+KAKSL+ VFD
Sbjct: 617 EKSSFNYIVNFLTSIDESSLFLLEEERRINSESKAKSLRFVFDIITTNPNDQTTTEKKSI 676
Query: 192 XXXXX-QKIPQRLYKLTEELEVLAQXXXXXXXXXQLMKQDQEIRTRKARRVVIYTDYSVN 368
+K+P+R YKLT+ELE L Q + K+D EI +RKA+RVVIYTD + +
Sbjct: 677 GIEEISKKVPRRSYKLTDELEGLDQENG------EEQKEDYEISSRKAKRVVIYTDNNPD 730
Query: 369 PETNDDEIN-----ELALIRYSQQPDFRRGLIKGSLRAQRRKTVIWNTFQAYVNSPLFFD 533
P+T+ D I+ E+ALIRYSQQPDF RG+I+GS+RAQRRKTVIW FQ V+SPLF D
Sbjct: 731 PDTDTDNIDQAEAEEVALIRYSQQPDFNRGIIQGSMRAQRRKTVIWEIFQTNVHSPLFLD 790
Query: 534 RVENIFFFSLLNK 572
R++ +FFFS ++
Sbjct: 791 RIDKVFFFSFFDR 803
>gb|AHA12896.1| hypothetical chloroplast RF19 [Maranta leuconeura]
Length = 1902
Score = 154 bits (390), Expect = 2e-35
Identities = 101/231 (43%), Positives = 131/231 (56%), Gaps = 25/231 (10%)
Frame = +3
Query: 3 INSLTSIDQLSFEYIPNSHLKKSSLLEEEIKRNS--ENKAKSLKSVFDXXXXXXXXXXXX 176
+NSLTSID+LSFE +P+ HL KSSLLEEEIKRN E++ K+ K VFD
Sbjct: 584 VNSLTSIDELSFESVPSFHLTKSSLLEEEIKRNLDFESQTKNFKFVFDTITTNPNDQTIT 643
Query: 177 XXXXXXXXXX-----QKIPQRLYKLTEELEVLAQXXXXXXXXXQLMKQDQE-------IR 320
+KIP+ YKLT+ELE+L +++Q IR
Sbjct: 644 REDSIIEESIIEEIIKKIPRWSYKLTDELELLEILDLKDQEKETETEEEQPKEDPDPGIR 703
Query: 321 TRKARRVVIYTDYSVNPETNDD-----------EINELALIRYSQQPDFRRGLIKGSLRA 467
+RKA+R+VIYT+ + N ++N + E E+ALI YS+QPDF R LIKG +RA
Sbjct: 704 SRKAKRMVIYTETNQNTDSNQNIDNIDEPETEAEAEEIALIHYSEQPDFNRDLIKGCMRA 763
Query: 468 QRRKTVIWNTFQAYVNSPLFFDRVENIFFFSLLNKIDQNIKSIFRNFAKKK 620
QRRKTVI FQ ++SPLFFDR +N FFS I Q I IF+N +K
Sbjct: 764 QRRKTVIGELFQPNIHSPLFFDREDNALFFSFF-YIYQTIHLIFKNSVGRK 813
>ref|YP_003434033.1| hypothetical chloroplast RF19 [Typha latifolia]
gi|281371830|gb|ADA63757.1| hypothetical chloroplast RF19
[Typha latifolia]
Length = 1835
Score = 154 bits (388), Expect = 3e-35
Identities = 93/217 (42%), Positives = 125/217 (57%), Gaps = 10/217 (4%)
Frame = +3
Query: 6 NSLTSIDQLSFEYIPNSHLKKSSLLEEEIKRNSENKAKSLKSVFDXXXXXXXXXXXXXXX 185
NSLTSI++ FE N HLKK SLL ++ + E +AKSLK +FD
Sbjct: 568 NSLTSINEFCFEPTSNFHLKKYSLLTDQTRIEFETRAKSLKFLFDVITTDLNDQTIRKKS 627
Query: 186 XXXXXXXQKIPQRLYKLTEELEVLAQXXXXXXXXXQLMKQDQEIRTRKARRVVIYTDYSV 365
+K+ + YKL+++LE + + +D EIR+RKA+RVVIYTD
Sbjct: 628 NGIEEISKKVSRWSYKLSDDLEEEEEEND------EESTEDPEIRSRKAKRVVIYTDNDQ 681
Query: 366 NPET----------NDDEINELALIRYSQQPDFRRGLIKGSLRAQRRKTVIWNTFQAYVN 515
N + D+ E+ALIRYSQQ D+RR +IKGS+RAQRRKTVIW FQA V+
Sbjct: 682 NTNSITTTNTINTDTSDQAEEVALIRYSQQSDYRRDIIKGSMRAQRRKTVIWEMFQANVH 741
Query: 516 SPLFFDRVENIFFFSLLNKIDQNIKSIFRNFAKKKPK 626
SPLF DR++ FFFS + I + + IFR KK+P+
Sbjct: 742 SPLFLDRIDKTFFFSSFD-IYEMMNRIFRGSVKKEPE 777
>ref|YP_003540991.1| hypothetical chloroplast RF1 [Phoenix dactylifera]
gi|290790971|gb|ADD63226.1| hypothetical chloroplast RF1
(chloroplast) [Phoenix dactylifera]
gi|294620637|gb|ADF28206.1| hypothetical chloroplast RF1
(chloroplast) [Phoenix dactylifera]
Length = 1877
Score = 151 bits (382), Expect = 1e-34
Identities = 95/216 (43%), Positives = 125/216 (57%), Gaps = 9/216 (4%)
Frame = +3
Query: 6 NSLTSIDQLSFEYIPNSHLKKSSLLEEEIKRNSENKAKSLKSVFDXXXXXXXXXXXXXXX 185
NSLTS SFE+IPN LK LL E+ K +SE++AKSLK +FD
Sbjct: 567 NSLTSF---SFEFIPNFSLKNCYLLAEQRKIDSESQAKSLKFIFDIITIDPNNQTTTRNK 623
Query: 186 XXXXXXX-QKIPQRLYKLTEELEVLAQXXXXXXXXXQLMKQDQEIRTRKARRVVIYTDY- 359
+K+P+ YKLT LE + + +D EIR+RKA+RVVIYTD
Sbjct: 624 SIGIEEISKKVPRWSYKLTNVLEEQEEENE------EKSTEDHEIRSRKAKRVVIYTDNE 677
Query: 360 -------SVNPETNDDEINELALIRYSQQPDFRRGLIKGSLRAQRRKTVIWNTFQAYVNS 518
+ N +N D+ E+ALIRYSQQ DFRR +IKGS+R QRRKTV W FQA +S
Sbjct: 678 NNTNSITNTNNTSNSDQAEEVALIRYSQQSDFRRDIIKGSMRTQRRKTVTWEMFQANAHS 737
Query: 519 PLFFDRVENIFFFSLLNKIDQNIKSIFRNFAKKKPK 626
PLF DR++ FFFS + I + + IFRN +++P+
Sbjct: 738 PLFLDRIDKTFFFSSFD-ISEMMNLIFRNSVEREPE 772
>ref|YP_740260.1| hypothetical chloroplast RF1 [Liriodendron tulipifera]
gi|118574755|sp|Q0G9G1.1|YCF1_LIRTU RecName:
Full=Putative membrane protein ycf1; Short=RF1
gi|113201052|gb|ABI32567.1| hypothetical chloroplast RF1
[Liriodendron tulipifera]
Length = 1835
Score = 151 bits (381), Expect = 2e-34
Identities = 94/213 (44%), Positives = 122/213 (57%), Gaps = 6/213 (2%)
Frame = +3
Query: 6 NSLTSIDQLSFEYIPNSHLKKSSLLEEEIKRNSENKAKSLKSVFDXXXXXXXXXXXXXXX 185
+SLTSI++ + E PN +LK +LL E+ + +SEN+ K LK + D
Sbjct: 531 HSLTSINKFAGESAPNLNLKGLALLAEQRRLDSENQTKCLKFLSDVVTTDPNDQTIQNKY 590
Query: 186 XXXXXXXQKIPQRLYKLTEELEVLAQXXXXXXXXXQLMKQDQEIRTRKARRVVIYTDYSV 365
+K+P+ YKLT+ LE + + +D IR+RKA+RVVIYTD
Sbjct: 591 IGIEEIGKKVPRWSYKLTDHLEEQEKENE------EESTEDHGIRSRKAKRVVIYTDNDQ 644
Query: 366 NPET------NDDEINELALIRYSQQPDFRRGLIKGSLRAQRRKTVIWNTFQAYVNSPLF 527
N T N D+ ELALIRYSQQ DFRR LIKGS+RAQRRKTV W FQA V+SPLF
Sbjct: 645 NTNTYTSTSTNSDQAEELALIRYSQQSDFRRDLIKGSMRAQRRKTVTWEMFQANVHSPLF 704
Query: 528 FDRVENIFFFSLLNKIDQNIKSIFRNFAKKKPK 626
DR++ FFFS I + IFRN+ K P+
Sbjct: 705 LDRIDKTFFFSF--DISGMMNLIFRNWVGKGPE 735
>ref|YP_008081424.1| hypothetical chloroplast RF1 (chloroplast) [Tetracentron sinense]
gi|479279261|gb|AGJ72115.1| hypothetical chloroplast RF1
(chloroplast) [Tetracentron sinense]
Length = 1895
Score = 150 bits (378), Expect = 4e-34
Identities = 93/209 (44%), Positives = 122/209 (58%), Gaps = 7/209 (3%)
Frame = +3
Query: 12 LTSIDQLSFEYIPNSHLKKSSLLEEEIKRNSENKAKSLKSVFDXXXXXXXXXXXXXXXXX 191
LTSI++ + E P+ +LK+ SL E+ + SENK K LK +FD
Sbjct: 568 LTSINEFTGESTPSFNLKELSLSAEQGRIYSENKEKFLKFLFDAVITDPNDQRIRKKSIG 627
Query: 192 XXXXXQKIPQRLYKLTEELEVLAQXXXXXXXXXQLMKQDQEIRTRKARRVVIYTDYSVNP 371
+K+P+ YKL +LE + + +D EIR+RKA+RVVI+TD N
Sbjct: 628 IKEISKKVPRWSYKLINDLE------QQEGGIEEEVAEDHEIRSRKAKRVVIFTDNEQNT 681
Query: 372 ET-------NDDEINELALIRYSQQPDFRRGLIKGSLRAQRRKTVIWNTFQAYVNSPLFF 530
ET ND++ NE+ALIRYSQQ DFRR +IKGS+RAQRRK VIW FQA V+SPLF
Sbjct: 682 ETHTNTSTSNDNQANEMALIRYSQQADFRRDIIKGSMRAQRRKIVIWELFQANVHSPLFL 741
Query: 531 DRVENIFFFSLLNKIDQNIKSIFRNFAKK 617
DR++ FFFS I +K IFRN+ K
Sbjct: 742 DRIDKTFFFSF--DIFGMMKPIFRNWMGK 768
>ref|YP_007476106.1| hypothetical chloroplast RF19 [Dasypogon bromeliifolius]
gi|449326590|gb|AGE93171.1| hypothetical chloroplast RF19
[Dasypogon bromeliifolius]
Length = 1844
Score = 150 bits (378), Expect = 4e-34
Identities = 98/211 (46%), Positives = 127/211 (60%), Gaps = 4/211 (1%)
Frame = +3
Query: 6 NSLTSIDQLSFEYIPNSHLKKSSL-LEEEIKRNSENKAKSLKSVFDXXXXXXXXXXXXXX 182
NSL SI++ SF+ I + HLKK SL E+ K S+NK KSLK +FD
Sbjct: 561 NSLPSIEKFSFDSILSFHLKKCSLSAAEQRKIYSKNKVKSLKFIFDVITTDSNDQTTIRN 620
Query: 183 XXXXXXXX-QKIPQRLYKLTEELEVLAQXXXXXXXXXQLMKQDQEIRTRKARRVVIYTDY 359
+K+P+ YKLT +LEV Q + +D EIR+RKA+RVVIYTD
Sbjct: 621 ESIGIEEVIKKVPRWSYKLTNDLEVEEQEEENE----EESTEDHEIRSRKAKRVVIYTDN 676
Query: 360 SVNPET-NDDEINELALIRYSQQPDFRRGLIKGSLRAQRRKTVIWNTFQAYVNSPLFFDR 536
N T N D+ E+ALIRYSQQ DFRR +IKGS+RAQRRKTVIW FQA V+SPLF D+
Sbjct: 677 DQNTSTSNSDQAEEVALIRYSQQSDFRRDIIKGSMRAQRRKTVIWEIFQANVHSPLFLDQ 736
Query: 537 VENIF-FFSLLNKIDQNIKSIFRNFAKKKPK 626
++ F FF + +NI IF+N ++P+
Sbjct: 737 IDKTFDFFDIYEM--KNI--IFKNLLCREPE 763
>gb|AFM83351.1| hypothetical chloroplast RF19 (chloroplast) [Kingia australis]
Length = 1849
Score = 149 bits (376), Expect = 6e-34
Identities = 95/214 (44%), Positives = 131/214 (61%), Gaps = 7/214 (3%)
Frame = +3
Query: 6 NSLTSIDQLSFEYIPNSHLKKSSLLEEEIKRNSENKAKSLKSVFDXXXXXXXXXXXXXXX 185
NSL SI++ SF+ IP+ +L+KSSL E+ K +S+N+ KSLK +FD
Sbjct: 561 NSLPSIEKFSFDSIPSFYLEKSSLSAEQRKVDSKNQEKSLKFLFDVITTDSNDETTIRNE 620
Query: 186 XXXXXXX-QKIPQRLYKLTEELEVLAQXXXXXXXXXQLMKQDQEIRTRKARRVVIYTDY- 359
+K+P+ YKLT +LE + + +D EIR+RKA+RVVIYTD
Sbjct: 621 SIGIEEVSKKVPRWSYKLTNDLEEQEEENE------EESTEDHEIRSRKAKRVVIYTDND 674
Query: 360 -----SVNPETNDDEINELALIRYSQQPDFRRGLIKGSLRAQRRKTVIWNTFQAYVNSPL 524
S N +N D+ E+ALIRYSQQ DFRR +IKGS+RAQRRKTVI FQA V+SPL
Sbjct: 675 QNTNSSTNNTSNSDQAEEVALIRYSQQSDFRRDIIKGSMRAQRRKTVILEMFQANVHSPL 734
Query: 525 FFDRVENIFFFSLLNKIDQNIKSIFRNFAKKKPK 626
F DR++ F F ++++ +NI IFRN ++P+
Sbjct: 735 FLDRIDKTFSFFDISEM-KNI--IFRNLLYREPE 765
>ref|YP_008993234.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia cathcartii]
Length = 1837
Score = 148 bits (373), Expect = 1e-33
Identities = 94/219 (42%), Positives = 122/219 (55%), Gaps = 12/219 (5%)
Frame = +3
Query: 6 NSLTSIDQLSFEYIPNSHLKKSSLLEEEIKRNSENKAKSLKSVFDXXXXXXXXXXXXXXX 185
+SLTSI +L+ E P+ +LK SLL E+ + +SEN+ K LK + D
Sbjct: 525 HSLTSISELAGESTPSLNLKGFSLLVEQRRLDSENQTKCLKFLSDVVTTDPNDQTIQKKS 584
Query: 186 XXXXXXXQKIPQRLYKLTEELEVLAQXXXXXXXXXQLMKQDQEIRTRKARRVVIYTDYSV 365
+K+P+ YKLT+ LE + + +D IR+RKA+RVVIYTD
Sbjct: 585 IGIEEIGKKVPRWSYKLTDRLEGQEEENE------EESTEDHGIRSRKAKRVVIYTDNDQ 638
Query: 366 NPE------------TNDDEINELALIRYSQQPDFRRGLIKGSLRAQRRKTVIWNTFQAY 509
N TN D+ E+ALIRYSQQ DFRR LIKGS+RAQRRKTV W FQA
Sbjct: 639 NTNNDQNTNTYTSTSTNSDQAQEVALIRYSQQSDFRRDLIKGSMRAQRRKTVTWEMFQAN 698
Query: 510 VNSPLFFDRVENIFFFSLLNKIDQNIKSIFRNFAKKKPK 626
V+SPLF DR++ FFFS I + IFRN+ K P+
Sbjct: 699 VHSPLFLDRIDKTFFFSF--DISGMMNLIFRNWVGKGPE 735
>ref|YP_008993922.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia sprengeri]
Length = 1846
Score = 147 bits (371), Expect = 2e-33
Identities = 93/219 (42%), Positives = 122/219 (55%), Gaps = 12/219 (5%)
Frame = +3
Query: 6 NSLTSIDQLSFEYIPNSHLKKSSLLEEEIKRNSENKAKSLKSVFDXXXXXXXXXXXXXXX 185
+SLTSI +L+ E P+ +LK +LL E+ + +SEN+ K LK + D
Sbjct: 534 HSLTSISELAGESTPSLNLKGFALLVEQRRLDSENQTKCLKFLSDVVTTDPNDQTIQKKS 593
Query: 186 XXXXXXXQKIPQRLYKLTEELEVLAQXXXXXXXXXQLMKQDQEIRTRKARRVVIYTDYSV 365
+K+P+ YKLT+ LE + + +D IR+RKA+RVVIYTD
Sbjct: 594 IGIEEIGKKVPRWSYKLTDHLEEQEEENE------EESTEDHGIRSRKAKRVVIYTDNDQ 647
Query: 366 NPE------------TNDDEINELALIRYSQQPDFRRGLIKGSLRAQRRKTVIWNTFQAY 509
N TN D+ E+ALIRYSQQ DFRR LIKGS+RAQRRKTV W FQA
Sbjct: 648 NTNNDQNTNTYTSTSTNSDQAQEVALIRYSQQSDFRRDLIKGSMRAQRRKTVTWEMFQAN 707
Query: 510 VNSPLFFDRVENIFFFSLLNKIDQNIKSIFRNFAKKKPK 626
V+SPLF DR++ FFFS I + IFRN+ K P+
Sbjct: 708 VHSPLFLDRIDKTFFFSF--DISGMMNLIFRNWVGKGPE 744
>ref|YP_004769771.1| hypothetical chloroplast RF19 [Magnolia kwangsiensis]
gi|302424237|gb|ADL39113.1| hypothetical chloroplast RF19
[Magnolia kwangsiensis]
Length = 1838
Score = 147 bits (371), Expect = 2e-33
Identities = 93/219 (42%), Positives = 122/219 (55%), Gaps = 12/219 (5%)
Frame = +3
Query: 6 NSLTSIDQLSFEYIPNSHLKKSSLLEEEIKRNSENKAKSLKSVFDXXXXXXXXXXXXXXX 185
+SLTSI +L+ E P+ +LK +LL E+ + +SEN+ K LK + D
Sbjct: 531 HSLTSISELAGESTPSLNLKGFALLVEQRRLDSENQTKCLKFLSDVVTTDPNDQTIQKKS 590
Query: 186 XXXXXXXQKIPQRLYKLTEELEVLAQXXXXXXXXXQLMKQDQEIRTRKARRVVIYTDYSV 365
+K+P+ YKLT+ LE + + +D IR+RKA+RVVIYTD
Sbjct: 591 IGIEEIGKKVPRWSYKLTDHLEEQEEENE------EESTEDHGIRSRKAKRVVIYTDNDQ 644
Query: 366 NPE------------TNDDEINELALIRYSQQPDFRRGLIKGSLRAQRRKTVIWNTFQAY 509
N TN D+ E+ALIRYSQQ DFRR LIKGS+RAQRRKTV W FQA
Sbjct: 645 NTNNDQNTNTYTSTSTNSDQAEEVALIRYSQQSDFRRDLIKGSMRAQRRKTVTWEMFQAN 704
Query: 510 VNSPLFFDRVENIFFFSLLNKIDQNIKSIFRNFAKKKPK 626
V+SPLF DR++ FFFS I + IFRN+ K P+
Sbjct: 705 VHSPLFLDRIDKTFFFSF--DISGMMNLIFRNWVGKGPE 741