BLASTX nr result

ID: Zingiber23_contig00039220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00039220
         (561 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ94059.1| predicted protein [Hordeum vulgare subsp. vulgar...    60   5e-07
ref|XP_004969020.1| PREDICTED: zinc finger protein NUTCRACKER-li...    57   2e-06
ref|XP_004968516.1| PREDICTED: zinc finger protein MAGPIE-like [...    56   5e-06
gb|EMS58474.1| Zinc finger protein MAGPIE [Triticum urartu]            56   5e-06
gb|ACF79370.1| unknown [Zea mays]                                      55   9e-06

>dbj|BAJ94059.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326502108|dbj|BAK06546.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 461

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 45/108 (41%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
 Frame = +1

Query: 22  ATAFPKPPSESFAHMSATALLQKAAQMGATV--AGGGNRGALASMMAGPDRRAYGSPFKA 195
           AT+ P P +   AH+SATALLQKAAQMGAT+  AG G  G   + MAG    A GS    
Sbjct: 298 ATSVPTPAAA--AHLSATALLQKAAQMGATIGGAGAGGAGVHYTQMAGSATSATGS---- 351

Query: 196 HGPFQLGRQFFDPSVSEVVGLVAGDGSALKHMARCGSGDVTTVDFLGL 339
              F LG           +   A  G + +  A  G+ D  T DFLGL
Sbjct: 352 -ATFGLGLSCLSNQQMMSLARTASQGRSGEEGASGGANDGMTRDFLGL 398


>ref|XP_004969020.1| PREDICTED: zinc finger protein NUTCRACKER-like [Setaria italica]
          Length = 436

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 51/110 (46%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
 Frame = +1

Query: 22  ATAFPKP--PSESFAHMSATALLQKAAQMGATVAGGGNRGALA--SMMAGPDRRAYGSPF 189
           AT+ P P  P+ S AH+SATALLQKAAQMGAT+AG G  GA A  + MAGP   A GS  
Sbjct: 278 ATSAPPPQLPAAS-AHLSATALLQKAAQMGATIAGAGAGGAGAHYTQMAGPATSAPGS-- 334

Query: 190 KAHGPFQLGRQFFDPSVSEVVGLVAGDGSALKHMARCGSGDVTTVDFLGL 339
                F LG    + +     G    DG       R   GD  T DFLGL
Sbjct: 335 ---ATFGLGLPGLN-AQQPARGRGGEDGGGGAGAGR--GGDGMTRDFLGL 378


>ref|XP_004968516.1| PREDICTED: zinc finger protein MAGPIE-like [Setaria italica]
          Length = 465

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 48/115 (41%), Positives = 54/115 (46%), Gaps = 12/115 (10%)
 Frame = +1

Query: 31  FPKPPSESFAHMSATALLQKAAQMGATVAGGGNRGALASM------MAGPDRRAYGS--P 186
           F  PP+ S AHMSATALLQKAAQMGAT++   N+G +AS+       A     A GS   
Sbjct: 311 FSPPPTASAAHMSATALLQKAAQMGATLSRPSNQGQMASVHSTSTTSANAAAAAAGSLPT 370

Query: 187 FKAH-GPFQLGRQFF---DPSVSEVVGLVAGDGSALKHMARCGSGDVTTVDFLGL 339
             AH G    G       D   S      AG G      A  G  D  T DFLGL
Sbjct: 371 TGAHTGALGFGASHHFGGDRERSSRTDRDAGSGGNAAGAAAGGGNDGLTRDFLGL 425


>gb|EMS58474.1| Zinc finger protein MAGPIE [Triticum urartu]
          Length = 399

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 46/113 (40%), Positives = 54/113 (47%), Gaps = 7/113 (6%)
 Frame = +1

Query: 22  ATAFPKPPSESF----AHMSATALLQKAAQMGATV--AGGGNRGALASMMAGPDRRAYGS 183
           AT+ P P  +      AH+SATALLQKAAQMGAT+  AG G  G   + MAG    A GS
Sbjct: 227 ATSVPTPTQQQLPAAAAHLSATALLQKAAQMGATIGGAGAGGAGVHYTQMAGSATSATGS 286

Query: 184 PFKAHGPFQLGRQFFDPSVSEVVGLVAGDG-SALKHMARCGSGDVTTVDFLGL 339
                  F LG           +   A  G S  +  A  G+ D  T DFLGL
Sbjct: 287 -----ATFGLGLSCLSNQQMMSLARTASQGRSGEEGGASGGANDGMTRDFLGL 334


>gb|ACF79370.1| unknown [Zea mays]
          Length = 428

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 49/118 (41%), Positives = 58/118 (49%), Gaps = 9/118 (7%)
 Frame = +1

Query: 13  GLDATAFPKPPSESFAHMSATALLQKAAQMGATVAGGGNRGALASMMAGPDRRAYGSPFK 192
           G  AT+ P+ P+ S AH+SATALLQKAAQMGAT+ G G      + MAGP   A  + F 
Sbjct: 259 GSAATSAPQLPAAS-AHLSATALLQKAAQMGATIGGAG-----YTQMAGPATSATAA-FG 311

Query: 193 AHGPFQLGRQFFDPSVSEVVG--LVAGDGSALKHMAR-------CGSGDVTTVDFLGL 339
              P     Q   P   +  G  + AG   A     R        GSGD  T DFLGL
Sbjct: 312 LGLPGLQNAQHHHPQQQDGGGGVMAAGLARAASSHGRGGDEGGGGGSGDGMTRDFLGL 369


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