BLASTX nr result

ID: Zingiber23_contig00039155 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00039155
         (331 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33026.2| Cyclin-like F-box; FAR1; Zinc finger, SWIM-type [...    55   3e-07

>gb|ABD33026.2| Cyclin-like F-box; FAR1; Zinc finger, SWIM-type [Medicago
           truncatula]
          Length = 1116

 Score = 55.5 bits (132), Expect(2) = 3e-07
 Identities = 26/45 (57%), Positives = 34/45 (75%)
 Frame = +3

Query: 195 IGMTFSSEEEVCTFYNSYAQNVGFGIYKLGGRNRDEGK*KYFSIG 329
           IGMTFSSEEEV  +Y SYA+ +GFG  K+  +N  +GK KYF++G
Sbjct: 354 IGMTFSSEEEVIKYYKSYARCMGFGTVKINSKNAKDGK-KYFTLG 397



 Score = 24.6 bits (52), Expect(2) = 3e-07
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +2

Query: 77  GEESVIEEEKSHSNEIKDNNDHAN 148
           G  S ++EE  H NE  D N  AN
Sbjct: 321 GSTSSVQEEVDHINENSDENLEAN 344


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