BLASTX nr result

ID: Zingiber23_contig00039132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00039132
         (223 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004969691.1| PREDICTED: RNA polymerase II transcriptional...    63   4e-08
ref|XP_004969690.1| PREDICTED: RNA polymerase II transcriptional...    63   4e-08
gb|AFW83695.1| hypothetical protein ZEAMMB73_831324 [Zea mays]         62   8e-08
ref|NP_001170611.1| hypothetical protein [Zea mays] gi|238006358...    62   8e-08
ref|XP_003569647.1| PREDICTED: RNA polymerase II transcriptional...    59   5e-07
gb|EEE55266.1| hypothetical protein OsJ_03184 [Oryza sativa Japo...    59   5e-07
ref|NP_001044014.1| Os01g0706000 [Oryza sativa Japonica Group] g...    59   5e-07
ref|XP_004298922.1| PREDICTED: RNA polymerase II transcriptional...    59   7e-07
dbj|BAB41214.1| putative transcriptional coactivator [Brassica r...    59   7e-07
ref|XP_004306659.1| PREDICTED: uncharacterized protein LOC101309...    59   9e-07
gb|EMS53006.1| RNA polymerase II transcriptional coactivator KEL...    57   3e-06
ref|XP_004245503.1| PREDICTED: RNA polymerase II transcriptional...    57   3e-06
dbj|BAK00827.1| predicted protein [Hordeum vulgare subsp. vulgare]     57   3e-06
ref|XP_006644584.1| PREDICTED: RNA polymerase II transcriptional...    55   8e-06
gb|EPS61007.1| hypothetical protein M569_13798 [Genlisea aurea]        55   8e-06
ref|NP_192830.1| transcriptional coactivator KELP [Arabidopsis t...    55   1e-05
ref|XP_002509991.1| RNA polymerase II transcriptional coactivato...    55   1e-05

>ref|XP_004969691.1| PREDICTED: RNA polymerase II transcriptional coactivator KELP-like
           isoform X2 [Setaria italica]
          Length = 181

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 37/75 (49%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
 Frame = -1

Query: 217 VVEILRESDMSSTSESMVRSTASKRLGLDLSSGVRKLFVRGIVESF---LDSQQTEDEEA 47
           V+ ILR SDM S +E  VRS A+ RLG+DLS+  RKLFVRG+VE +   L SQ+ E+E+ 
Sbjct: 13  VLGILRGSDMESVTEYKVRSAAAARLGIDLSAPDRKLFVRGVVEGYLTSLSSQEAEEEQQ 72

Query: 46  VGDFPAIRLKGEEEE 2
                    KG+E E
Sbjct: 73  QQGGDGEEAKGDEGE 87


>ref|XP_004969690.1| PREDICTED: RNA polymerase II transcriptional coactivator KELP-like
           isoform X1 [Setaria italica]
          Length = 206

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 37/75 (49%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
 Frame = -1

Query: 217 VVEILRESDMSSTSESMVRSTASKRLGLDLSSGVRKLFVRGIVESF---LDSQQTEDEEA 47
           V+ ILR SDM S +E  VRS A+ RLG+DLS+  RKLFVRG+VE +   L SQ+ E+E+ 
Sbjct: 13  VLGILRGSDMESVTEYKVRSAAAARLGIDLSAPDRKLFVRGVVEGYLTSLSSQEAEEEQQ 72

Query: 46  VGDFPAIRLKGEEEE 2
                    KG+E E
Sbjct: 73  QQGGDGEEAKGDEGE 87


>gb|AFW83695.1| hypothetical protein ZEAMMB73_831324 [Zea mays]
          Length = 209

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 33/57 (57%), Positives = 42/57 (73%)
 Frame = -1

Query: 223 AAVVEILRESDMSSTSESMVRSTASKRLGLDLSSGVRKLFVRGIVESFLDSQQTEDE 53
           A V+EILR SDM S +E  VR+ AS RLG+DLS   RKLFVRG+VE +L S  +++E
Sbjct: 11  ATVLEILRGSDMESVTEYKVRAAASDRLGIDLSIPDRKLFVRGVVEEYLLSLSSKEE 67


>ref|NP_001170611.1| hypothetical protein [Zea mays] gi|238006358|gb|ACR34214.1| unknown
           [Zea mays] gi|413951045|gb|AFW83694.1| hypothetical
           protein ZEAMMB73_831324 [Zea mays]
          Length = 183

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 33/57 (57%), Positives = 42/57 (73%)
 Frame = -1

Query: 223 AAVVEILRESDMSSTSESMVRSTASKRLGLDLSSGVRKLFVRGIVESFLDSQQTEDE 53
           A V+EILR SDM S +E  VR+ AS RLG+DLS   RKLFVRG+VE +L S  +++E
Sbjct: 11  ATVLEILRGSDMESVTEYKVRAAASDRLGIDLSIPDRKLFVRGVVEEYLLSLSSKEE 67


>ref|XP_003569647.1| PREDICTED: RNA polymerase II transcriptional coactivator KELP-like
           [Brachypodium distachyon]
          Length = 183

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 33/58 (56%), Positives = 41/58 (70%)
 Frame = -1

Query: 223 AAVVEILRESDMSSTSESMVRSTASKRLGLDLSSGVRKLFVRGIVESFLDSQQTEDEE 50
           A V+EILR SD  S++E  VRS A+ RLG+DLS   RKLFVR IV+ +L S   EDE+
Sbjct: 11  ATVLEILRGSDRESSTEYKVRSAATDRLGIDLSLPDRKLFVRRIVDGYLRSLVEEDEQ 68


>gb|EEE55266.1| hypothetical protein OsJ_03184 [Oryza sativa Japonica Group]
          Length = 315

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 31/58 (53%), Positives = 41/58 (70%)
 Frame = -1

Query: 223 AAVVEILRESDMSSTSESMVRSTASKRLGLDLSSGVRKLFVRGIVESFLDSQQTEDEE 50
           + V+EILR SDM S +E  VR+ A+ RLG+DLS   RK FVR +VE +L+S   EDE+
Sbjct: 11  STVLEILRGSDMESLTEFKVRTAAADRLGIDLSIPDRKRFVRRVVEGYLESLSQEDEQ 68



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 31/58 (53%), Positives = 41/58 (70%)
 Frame = -1

Query: 223 AAVVEILRESDMSSTSESMVRSTASKRLGLDLSSGVRKLFVRGIVESFLDSQQTEDEE 50
           + V+EILR SDM S +E  VR+ A+ RLG+DLS   RK FVR +VE +L+S   EDE+
Sbjct: 142 STVLEILRGSDMESLTEFKVRTAAADRLGIDLSIPDRKRFVRRVVEGYLESLSQEDEQ 199


>ref|NP_001044014.1| Os01g0706000 [Oryza sativa Japonica Group]
           gi|13872930|dbj|BAB44036.1| transcriptional
           coactivator-like [Oryza sativa Japonica Group]
           gi|19571089|dbj|BAB86514.1| transcriptional
           coactivator-like [Oryza sativa Japonica Group]
           gi|113533545|dbj|BAF05928.1| Os01g0706000 [Oryza sativa
           Japonica Group] gi|125527421|gb|EAY75535.1| hypothetical
           protein OsI_03440 [Oryza sativa Indica Group]
           gi|215679062|dbj|BAG96492.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215697829|dbj|BAG92022.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215765526|dbj|BAG87223.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 184

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 31/58 (53%), Positives = 41/58 (70%)
 Frame = -1

Query: 223 AAVVEILRESDMSSTSESMVRSTASKRLGLDLSSGVRKLFVRGIVESFLDSQQTEDEE 50
           + V+EILR SDM S +E  VR+ A+ RLG+DLS   RK FVR +VE +L+S   EDE+
Sbjct: 11  STVLEILRGSDMESLTEFKVRTAAADRLGIDLSIPDRKRFVRRVVEGYLESLSQEDEQ 68


>ref|XP_004298922.1| PREDICTED: RNA polymerase II transcriptional coactivator KELP-like
           [Fragaria vesca subsp. vesca]
          Length = 159

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 31/57 (54%), Positives = 38/57 (66%)
 Frame = -1

Query: 217 VVEILRESDMSSTSESMVRSTASKRLGLDLSSGVRKLFVRGIVESFLDSQQTEDEEA 47
           V  IL ESDM   +ES +R  AS+ LGLDL+    K FV+ +VESFLD QQ + EEA
Sbjct: 13  VRRILEESDMDQVTESKIRKQASQELGLDLNKPPFKAFVKQVVESFLDEQQRKHEEA 69


>dbj|BAB41214.1| putative transcriptional coactivator [Brassica rapa]
          Length = 165

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 33/61 (54%), Positives = 43/61 (70%), Gaps = 5/61 (8%)
 Frame = -1

Query: 217 VVEILRESDMSSTSESMVRSTASKRLGLDLSSGVRKLFVRGIVESFLD-----SQQTEDE 53
           V EIL+ESDM+  +E  VR+ AS+RLG+DLS    K FVRGIV+SFL+      QQ +D+
Sbjct: 13  VREILKESDMTEMTEFKVRNLASERLGIDLSDKSHKAFVRGIVKSFLEEVESKQQQQQDK 72

Query: 52  E 50
           E
Sbjct: 73  E 73


>ref|XP_004306659.1| PREDICTED: uncharacterized protein LOC101309666 [Fragaria vesca
           subsp. vesca]
          Length = 564

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 36/77 (46%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
 Frame = -1

Query: 217 VVEILRESDMSSTSESMVRSTASKRLGLDLSSGVRKLFVRGIVESFLDS-----QQTEDE 53
           VV+ILR + +   SE  VR+ AS+RLG+DLS   RK FVRG+VESFL S         + 
Sbjct: 13  VVDILRSTSLDEMSEFKVRAAASERLGIDLSDVERKSFVRGVVESFLISTAEAAAPESEP 72

Query: 52  EAVGDFPAIRLKGEEEE 2
             VG+    RLK E  E
Sbjct: 73  PGVGEEKEARLKKEANE 89


>gb|EMS53006.1| RNA polymerase II transcriptional coactivator KELP [Triticum
           urartu]
          Length = 178

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 31/62 (50%), Positives = 41/62 (66%)
 Frame = -1

Query: 223 AAVVEILRESDMSSTSESMVRSTASKRLGLDLSSGVRKLFVRGIVESFLDSQQTEDEEAV 44
           AAV+EILR SDM S +E  VR+ A+ RLG+DL   + K FVR +VE +L S   E++E  
Sbjct: 11  AAVLEILRGSDMESLTEYKVRTAAADRLGVDLDLPLHKRFVRRLVEDYLKSLAEEEDEKQ 70

Query: 43  GD 38
            D
Sbjct: 71  KD 72


>ref|XP_004245503.1| PREDICTED: RNA polymerase II transcriptional coactivator KELP-like
           [Solanum lycopersicum]
          Length = 175

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 31/72 (43%), Positives = 44/72 (61%)
 Frame = -1

Query: 217 VVEILRESDMSSTSESMVRSTASKRLGLDLSSGVRKLFVRGIVESFLDSQQTEDEEAVGD 38
           V++IL+ S++   SE  +R  AS++LGLDLS   RK FVR +VE FL  +Q + E    D
Sbjct: 13  VLDILKTSNLEEVSEQKIRRMASEKLGLDLSEPTRKKFVRQVVEKFLAEEQAKREANAAD 72

Query: 37  FPAIRLKGEEEE 2
                +K EEE+
Sbjct: 73  ----EVKEEEED 80


>dbj|BAK00827.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 190

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 30/57 (52%), Positives = 40/57 (70%)
 Frame = -1

Query: 223 AAVVEILRESDMSSTSESMVRSTASKRLGLDLSSGVRKLFVRGIVESFLDSQQTEDE 53
           AAV+EILR SDM S +E  VR+TA+ RLG+DL   + K FVR +VE +L S   E++
Sbjct: 11  AAVLEILRGSDMESLTEYKVRTTAADRLGIDLDLPLHKRFVRRLVEDYLKSLAEEED 67


>ref|XP_006644584.1| PREDICTED: RNA polymerase II transcriptional coactivator KELP-like
           isoform X1 [Oryza brachyantha]
          Length = 188

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 28/58 (48%), Positives = 41/58 (70%)
 Frame = -1

Query: 223 AAVVEILRESDMSSTSESMVRSTASKRLGLDLSSGVRKLFVRGIVESFLDSQQTEDEE 50
           + V+EILR SDM S +E  VR+ A+ RLG+DLS   RK FVR +VE +L++   E+++
Sbjct: 11  STVLEILRGSDMESLTEFKVRTAAADRLGIDLSVPDRKRFVRRVVEGYLEALSQEEDQ 68


>gb|EPS61007.1| hypothetical protein M569_13798 [Genlisea aurea]
          Length = 169

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 31/72 (43%), Positives = 45/72 (62%)
 Frame = -1

Query: 217 VVEILRESDMSSTSESMVRSTASKRLGLDLSSGVRKLFVRGIVESFLDSQQTEDEEAVGD 38
           V+EILR S+M  T+E  +R +AS+ LG+DLS    K+FVR +VES+L  Q+ + +E    
Sbjct: 13  VLEILRNSNMDETTEFQIRKSASEVLGMDLSEPPVKMFVRDVVESYLREQRAKAKEEEKQ 72

Query: 37  FPAIRLKGEEEE 2
                 + EEEE
Sbjct: 73  EQEPEPEEEEEE 84


>ref|NP_192830.1| transcriptional coactivator KELP [Arabidopsis thaliana]
           gi|145333013|ref|NP_001078372.1| transcriptional
           coactivator KELP [Arabidopsis thaliana]
           gi|37079408|sp|O65155.1|KELP_ARATH RecName: Full=RNA
           polymerase II transcriptional coactivator KELP
           gi|2997686|gb|AAC08575.1| putative transcriptional
           co-activator [Arabidopsis thaliana]
           gi|3513735|gb|AAC33951.1| contains similarity to RNA
           polymerase II transcription cofactor p15 [Arabidopsis
           thaliana] gi|4539366|emb|CAB40060.1| putative protein
           [Arabidopsis thaliana] gi|7267790|emb|CAB81193.1|
           putative protein [Arabidopsis thaliana]
           gi|21554027|gb|AAM63108.1| putative transcriptional
           coactivator [Arabidopsis thaliana]
           gi|29028806|gb|AAO64782.1| At4g10920 [Arabidopsis
           thaliana] gi|110736559|dbj|BAF00245.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|110738319|dbj|BAF01087.1| hypothetical protein
           [Arabidopsis thaliana] gi|332657543|gb|AEE82943.1|
           transcriptional coactivator KELP [Arabidopsis thaliana]
           gi|332657544|gb|AEE82944.1| transcriptional coactivator
           KELP [Arabidopsis thaliana]
          Length = 165

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/56 (48%), Positives = 36/56 (64%)
 Frame = -1

Query: 217 VVEILRESDMSSTSESMVRSTASKRLGLDLSSGVRKLFVRGIVESFLDSQQTEDEE 50
           V+EIL ESDM   +E  VR  AS++L +DLS    K FVR +VE FLD ++  + E
Sbjct: 13  VIEILSESDMKEITEFKVRKLASEKLAIDLSEKSHKAFVRSVVEKFLDEERAREYE 68


>ref|XP_002509991.1| RNA polymerase II transcriptional coactivator kelp, putative
           [Ricinus communis] gi|223549890|gb|EEF51378.1| RNA
           polymerase II transcriptional coactivator kelp, putative
           [Ricinus communis]
          Length = 151

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/56 (46%), Positives = 39/56 (69%)
 Frame = -1

Query: 217 VVEILRESDMSSTSESMVRSTASKRLGLDLSSGVRKLFVRGIVESFLDSQQTEDEE 50
           V EIL ESDM +T+E+ +R  AS++L LDL+    K FVR +V +FL+ Q  ++E+
Sbjct: 13  VREILEESDMETTTENQIRKIASRKLELDLNKSEYKAFVRHVVNNFLEEQNAKEEQ 68


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