BLASTX nr result

ID: Zingiber23_contig00039119 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00039119
         (340 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006845519.1| hypothetical protein AMTR_s00019p00166860 [A...    64   3e-08
gb|AFW73816.1| hypothetical protein ZEAMMB73_717603 [Zea mays]         59   7e-07
gb|EMJ26602.1| hypothetical protein PRUPE_ppa000630mg [Prunus pe...    58   1e-06

>ref|XP_006845519.1| hypothetical protein AMTR_s00019p00166860 [Amborella trichopoda]
           gi|548848091|gb|ERN07194.1| hypothetical protein
           AMTR_s00019p00166860 [Amborella trichopoda]
          Length = 1050

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 36/94 (38%), Positives = 50/94 (53%), Gaps = 16/94 (17%)
 Frame = +1

Query: 106 QRTDLCPLCREGYHIELAKLVSEE--------RTENSNVNLSQWLQIALPCNNNSKADHL 261
           ++ + CP C EGY  ELAKLV++E        + E     L QWLQ+A P ++  + DHL
Sbjct: 470 RKMNCCPSCMEGYEQELAKLVAKEFEKPSPNSKPEAPRQQLPQWLQMAKPQSDTKQNDHL 529

Query: 262 Q--------KQKAEELLETWRGKCARLHMSSRAT 339
           Q        KQK EEL + W+  C +LH +   T
Sbjct: 530 QSKDTESDWKQKTEELQKKWKETCRQLHPNFHLT 563


>gb|AFW73816.1| hypothetical protein ZEAMMB73_717603 [Zea mays]
          Length = 953

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
 Frame = +1

Query: 31  RGFLPSSTPANARSMFPTLQYSSYFQRTDLCPLCREGYHIELAKLVSEERTE-NSNVNLS 207
           RG L SS    + +M   +Q     +   LC  C EGY  E A++ S ER    +   +S
Sbjct: 402 RGILSSSVEVLSTAMTSPMQ-----RAPSLCSACAEGYERERAEMASSERAPCPAEQPMS 456

Query: 208 QWLQIALPCNNNSKADHLQKQ--KAEELLETWRGKCARLHMSSR 333
           QWLQI  P ++   AD  Q++  +A+EL   WR +CA+LH   R
Sbjct: 457 QWLQIGTP-SSGRPADRAQEKAREADELRRRWRDRCAQLHSHGR 499


>gb|EMJ26602.1| hypothetical protein PRUPE_ppa000630mg [Prunus persica]
          Length = 1060

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 43/119 (36%), Positives = 59/119 (49%), Gaps = 12/119 (10%)
 Frame = +1

Query: 7   SRSPLLTGRGFLPSSTPANARSMFPTLQYSSYFQRTDLCPLCREGYHIELAKLV---SEE 177
           S SPL +     P+++ A  R +   L  +   +R   CP C + Y  ELAKLV   SE+
Sbjct: 429 SLSPLKS----FPTTSIAQPRLLSENLDPT---RRASRCPQCTQSYEQELAKLVAKESEK 481

Query: 178 RTENSNVNLSQWLQIALPCNNNSKA---------DHLQKQKAEELLETWRGKCARLHMS 327
            +E +   L QWLQ A   + ++K          D + KQK EEL + WR  C RLH S
Sbjct: 482 SSEAAQPPLPQWLQNAKARDGHAKTLDETQTKDQDPILKQKTEELQKEWRDTCVRLHPS 540


Top