BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00039010
         (266 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB23431.1| hypothetical protein L484_005720 [Morus notabilis]     134   1e-29
gb|EOY07672.1| Pentatricopeptide repeat (PPR) superfamily protei...   122   6e-26
ref|XP_004305232.1| PREDICTED: pentatricopeptide repeat-containi...   117   2e-24
gb|EMJ09302.1| hypothetical protein PRUPE_ppa001024mg [Prunus pe...   116   4e-24
ref|XP_006480538.1| PREDICTED: pentatricopeptide repeat-containi...   115   6e-24
ref|XP_006428952.1| hypothetical protein CICLE_v10011246mg [Citr...   115   6e-24
ref|XP_002525211.1| pentatricopeptide repeat-containing protein,...   113   3e-23
ref|XP_004246924.1| PREDICTED: pentatricopeptide repeat-containi...   109   4e-22
ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   109   4e-22
ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containi...   109   4e-22
ref|XP_002308496.1| pentatricopeptide repeat-containing family p...   108   6e-22
ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containi...   107   1e-21
gb|EEE58821.1| hypothetical protein OsJ_10390 [Oryza sativa Japo...   106   3e-21
gb|EEC74995.1| hypothetical protein OsI_11055 [Oryza sativa Indi...   106   3e-21
ref|NP_001049755.1| Os03g0283500 [Oryza sativa Japonica Group] g...   106   3e-21
ref|XP_006345726.1| PREDICTED: pentatricopeptide repeat-containi...   106   4e-21
tpg|DAA44778.1| TPA: hypothetical protein ZEAMMB73_421222 [Zea m...   105   5e-21
ref|XP_003561748.1| PREDICTED: pentatricopeptide repeat-containi...   105   5e-21
ref|XP_003541398.1| PREDICTED: pentatricopeptide repeat-containi...   105   5e-21
gb|EMT16897.1| hypothetical protein F775_01269 [Aegilops tauschii]    105   8e-21

>gb|EXB23431.1| hypothetical protein L484_005720 [Morus notabilis]
          Length = 633

 Score =  134 bits (338), Expect = 1e-29
 Identities = 63/88 (71%), Positives = 74/88 (84%)
 Frame = +3

Query: 3   LEAARRVFDATTSRSLIIWTAIISSYAAHGDVEAALHLFNEMLEAGIKPDHVTFTAVLSA 182
           L  ARRVFD +  RSLIIWTAIIS+YAAHGDVE +LHLF+EM+  GI+PD VTFTAVL++
Sbjct: 425 LHGARRVFDQSRGRSLIIWTAIISAYAAHGDVETSLHLFDEMVNNGIRPDEVTFTAVLTS 484

Query: 183 CAHAGAVDEARRIFDAMLPAYGVPPKME 266
           CAH G VDEAR+IFD+MLP YG+ P ME
Sbjct: 485 CAHCGLVDEARKIFDSMLPQYGIHPSME 512


>gb|EOY07672.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           [Theobroma cacao]
          Length = 667

 Score =  122 bits (305), Expect = 6e-26
 Identities = 59/85 (69%), Positives = 71/85 (83%)
 Frame = +3

Query: 12  ARRVFDATTSRSLIIWTAIISSYAAHGDVEAALHLFNEMLEAGIKPDHVTFTAVLSACAH 191
           A+RVFD +  RSLIIWTAII++Y+AHGDV AAL  F+EML  GI+PD VTFTAVLSACAH
Sbjct: 427 AQRVFDQSKCRSLIIWTAIIAAYSAHGDVNAALGYFHEMLNNGIQPDPVTFTAVLSACAH 486

Query: 192 AGAVDEARRIFDAMLPAYGVPPKME 266
           +G VDEA++IFDAML  YG+ P +E
Sbjct: 487 SGMVDEAQKIFDAMLEEYGISPSVE 511


>ref|XP_004305232.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37310-like [Fragaria vesca subsp. vesca]
          Length = 664

 Score =  117 bits (292), Expect = 2e-24
 Identities = 53/88 (60%), Positives = 71/88 (80%)
 Frame = +3

Query: 3   LEAARRVFDATTSRSLIIWTAIISSYAAHGDVEAALHLFNEMLEAGIKPDHVTFTAVLSA 182
           L  A++VFD +  +SL+IWTAIIS+YAAHGD   ++ LFN+M+ +GI+PD VTFTAVL+A
Sbjct: 420 LSGAQQVFDQSKYKSLVIWTAIISAYAAHGDANVSIGLFNKMIGSGIQPDEVTFTAVLTA 479

Query: 183 CAHAGAVDEARRIFDAMLPAYGVPPKME 266
           C+H+GAVDEA +IF AM P YG+ P +E
Sbjct: 480 CSHSGAVDEAWKIFKAMFPVYGIHPSVE 507


>gb|EMJ09302.1| hypothetical protein PRUPE_ppa001024mg [Prunus persica]
          Length = 931

 Score =  116 bits (290), Expect = 4e-24
 Identities = 54/88 (61%), Positives = 70/88 (79%)
 Frame = +3

Query: 3   LEAARRVFDATTSRSLIIWTAIISSYAAHGDVEAALHLFNEMLEAGIKPDHVTFTAVLSA 182
           +  A++VF+ +  +SLIIWTAIIS+YA+HGD + AL LF EML  GI+PD VTFTAVL+A
Sbjct: 424 VHGAQQVFNQSRGKSLIIWTAIISAYASHGDADMALGLFYEMLNNGIQPDQVTFTAVLTA 483

Query: 183 CAHAGAVDEARRIFDAMLPAYGVPPKME 266
           CAH+G VDE+ +IFDAM P YG+ P +E
Sbjct: 484 CAHSGVVDESWKIFDAMFPKYGIQPSVE 511


>ref|XP_006480538.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37310-like [Citrus sinensis]
          Length = 663

 Score =  115 bits (288), Expect = 6e-24
 Identities = 58/88 (65%), Positives = 67/88 (76%)
 Frame = +3

Query: 3   LEAARRVFDATTSRSLIIWTAIISSYAAHGDVEAALHLFNEMLEAGIKPDHVTFTAVLSA 182
           L  A+RVFD    RSLIIWTAIIS+YAAHGD   A+ LFNEML  GI+PD VTFTAVLSA
Sbjct: 420 LHGAQRVFDRFKGRSLIIWTAIISAYAAHGDASKAVSLFNEMLNNGIQPDPVTFTAVLSA 479

Query: 183 CAHAGAVDEARRIFDAMLPAYGVPPKME 266
           CAH+G VD+A  IF+AM   YG+ P +E
Sbjct: 480 CAHSGLVDKAWDIFNAMSGQYGIQPSVE 507


>ref|XP_006428952.1| hypothetical protein CICLE_v10011246mg [Citrus clementina]
           gi|557531009|gb|ESR42192.1| hypothetical protein
           CICLE_v10011246mg [Citrus clementina]
          Length = 663

 Score =  115 bits (288), Expect = 6e-24
 Identities = 58/88 (65%), Positives = 67/88 (76%)
 Frame = +3

Query: 3   LEAARRVFDATTSRSLIIWTAIISSYAAHGDVEAALHLFNEMLEAGIKPDHVTFTAVLSA 182
           L  A+RVFD    RSLIIWTAIIS+YAAHGD   A+ LFNEML  GI+PD VTFTAVLSA
Sbjct: 420 LHGAQRVFDRFKGRSLIIWTAIISAYAAHGDASKAVSLFNEMLNNGIQPDPVTFTAVLSA 479

Query: 183 CAHAGAVDEARRIFDAMLPAYGVPPKME 266
           CAH+G VD+A  IF+AM   YG+ P +E
Sbjct: 480 CAHSGLVDKAWDIFNAMSGQYGIQPSVE 507


>ref|XP_002525211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535508|gb|EEF37177.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 654

 Score =  113 bits (282), Expect = 3e-23
 Identities = 54/88 (61%), Positives = 67/88 (76%)
 Frame = +3

Query: 3   LEAARRVFDATTSRSLIIWTAIISSYAAHGDVEAALHLFNEMLEAGIKPDHVTFTAVLSA 182
           L  A+RVFD +  RSL+IWTAIIS+YA HGD   AL LF+EML+ GI+PD VTFTAVL+A
Sbjct: 411 LRGAQRVFDQSKDRSLVIWTAIISAYAVHGDANLALGLFHEMLKQGIQPDPVTFTAVLAA 470

Query: 183 CAHAGAVDEARRIFDAMLPAYGVPPKME 266
           CAH G VD+A  IF++M   YG+ P +E
Sbjct: 471 CAHCGMVDKAWEIFESMFKKYGIQPLVE 498


>ref|XP_004246924.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37310-like [Solanum lycopersicum]
          Length = 651

 Score =  109 bits (272), Expect = 4e-22
 Identities = 55/88 (62%), Positives = 69/88 (78%)
 Frame = +3

Query: 3   LEAARRVFDATTSRSLIIWTAIISSYAAHGDVEAALHLFNEMLEAGIKPDHVTFTAVLSA 182
           +++ARRVFD T  RS+IIWTAIIS+YA HG+ +AAL LFN ML   I+PD VTFTAVL+A
Sbjct: 411 IQSARRVFDHTNDRSVIIWTAIISAYANHGESKAALDLFNVMLSHCIRPDSVTFTAVLAA 470

Query: 183 CAHAGAVDEARRIFDAMLPAYGVPPKME 266
           CAH+G +DEA RIF+ +L  YG+ P  E
Sbjct: 471 CAHSGLIDEAWRIFE-LLEKYGIQPSDE 497


>ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g37310-like [Cucumis sativus]
          Length = 635

 Score =  109 bits (272), Expect = 4e-22
 Identities = 52/88 (59%), Positives = 65/88 (73%)
 Frame = +3

Query: 3   LEAARRVFDATTSRSLIIWTAIISSYAAHGDVEAALHLFNEMLEAGIKPDHVTFTAVLSA 182
           L  A+ VFD    RSLI WT+IIS+YA HGD   AL LF EML  GI+PD VTFT+VL+A
Sbjct: 393 LHGAQLVFDQIKGRSLIAWTSIISAYAVHGDANVALSLFYEMLTNGIQPDQVTFTSVLAA 452

Query: 183 CAHAGAVDEARRIFDAMLPAYGVPPKME 266
           CAH+G +DEA +IF+ +LP YG+ P +E
Sbjct: 453 CAHSGELDEAWKIFNVLLPEYGIQPLVE 480


>ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37310-like [Cucumis sativus]
          Length = 595

 Score =  109 bits (272), Expect = 4e-22
 Identities = 52/88 (59%), Positives = 65/88 (73%)
 Frame = +3

Query: 3   LEAARRVFDATTSRSLIIWTAIISSYAAHGDVEAALHLFNEMLEAGIKPDHVTFTAVLSA 182
           L  A+ VFD    RSLI WT+IIS+YA HGD   AL LF EML  GI+PD VTFT+VL+A
Sbjct: 393 LHGAQLVFDQIKGRSLIAWTSIISAYAVHGDANVALSLFYEMLTNGIQPDQVTFTSVLAA 452

Query: 183 CAHAGAVDEARRIFDAMLPAYGVPPKME 266
           CAH+G +DEA +IF+ +LP YG+ P +E
Sbjct: 453 CAHSGELDEAWKIFNVLLPEYGIQPLVE 480


>ref|XP_002308496.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222854472|gb|EEE92019.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 621

 Score =  108 bits (271), Expect = 6e-22
 Identities = 53/85 (62%), Positives = 65/85 (76%)
 Frame = +3

Query: 3   LEAARRVFDATTSRSLIIWTAIISSYAAHGDVEAALHLFNEMLEAGIKPDHVTFTAVLSA 182
           L  A+ VFD +  RSLIIWTAIIS++AAHGD  +AL  F+EML  GI+PDHVTFTAVL+A
Sbjct: 409 LFGAQYVFDQSKERSLIIWTAIISAHAAHGDANSALTFFDEMLSNGIQPDHVTFTAVLAA 468

Query: 183 CAHAGAVDEARRIFDAMLPAYGVPP 257
           CAH G VD+A  IF++M   YG+ P
Sbjct: 469 CAHCGMVDKAWEIFNSMSKKYGIQP 493


>ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37310-like [Vitis vinifera]
          Length = 667

 Score =  107 bits (268), Expect = 1e-21
 Identities = 53/88 (60%), Positives = 65/88 (73%)
 Frame = +3

Query: 3   LEAARRVFDATTSRSLIIWTAIISSYAAHGDVEAALHLFNEMLEAGIKPDHVTFTAVLSA 182
           L  A+ VFD +  RSLI+WTAIIS+Y+AHGD  AAL LF +ML  G +PD VTFTAVL+A
Sbjct: 424 LRGAQWVFDQSKDRSLIVWTAIISAYSAHGDANAALRLFGDMLSNGTQPDPVTFTAVLAA 483

Query: 183 CAHAGAVDEARRIFDAMLPAYGVPPKME 266
           CAH+G V+EA +IFD M   YG  P +E
Sbjct: 484 CAHSGMVNEAWKIFDEMFLKYGFQPCVE 511


>gb|EEE58821.1| hypothetical protein OsJ_10390 [Oryza sativa Japonica Group]
          Length = 890

 Score =  106 bits (265), Expect = 3e-21
 Identities = 50/88 (56%), Positives = 66/88 (75%)
 Frame = +3

Query: 3   LEAARRVFDATTSRSLIIWTAIISSYAAHGDVEAALHLFNEMLEAGIKPDHVTFTAVLSA 182
           L+ AR+VF  T  RS I+WT+IIS+ AAHG+   AL LFN+M+ AG KPD VTFT VLSA
Sbjct: 240 LDTARKVFKLTEHRSTIVWTSIISAVAAHGEAVEALSLFNQMITAGAKPDTVTFTTVLSA 299

Query: 183 CAHAGAVDEARRIFDAMLPAYGVPPKME 266
           CAH+G V EAR++F++M   +G+ P +E
Sbjct: 300 CAHSGKVAEARKVFNSMQAVFGISPVIE 327


>gb|EEC74995.1| hypothetical protein OsI_11055 [Oryza sativa Indica Group]
          Length = 1018

 Score =  106 bits (265), Expect = 3e-21
 Identities = 50/88 (56%), Positives = 66/88 (75%)
 Frame = +3

Query: 3   LEAARRVFDATTSRSLIIWTAIISSYAAHGDVEAALHLFNEMLEAGIKPDHVTFTAVLSA 182
           L+ AR+VF  T  RS I+WT+IIS+ AAHG+   AL LFN+M+ AG KPD VTFT VLSA
Sbjct: 368 LDTARKVFKLTEHRSTIVWTSIISAVAAHGEAVEALSLFNQMITAGAKPDTVTFTTVLSA 427

Query: 183 CAHAGAVDEARRIFDAMLPAYGVPPKME 266
           CAH+G V EAR++F++M   +G+ P +E
Sbjct: 428 CAHSGKVAEARKVFNSMQAVFGISPVIE 455


>ref|NP_001049755.1| Os03g0283500 [Oryza sativa Japonica Group]
           gi|24796822|gb|AAN64498.1| putative PPR repeat
           containing protein [Oryza sativa Japonica Group]
           gi|108707537|gb|ABF95332.1| pentatricopeptide, putative,
           expressed [Oryza sativa Japonica Group]
           gi|113548226|dbj|BAF11669.1| Os03g0283500 [Oryza sativa
           Japonica Group] gi|215737043|dbj|BAG95972.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 598

 Score =  106 bits (265), Expect = 3e-21
 Identities = 50/88 (56%), Positives = 66/88 (75%)
 Frame = +3

Query: 3   LEAARRVFDATTSRSLIIWTAIISSYAAHGDVEAALHLFNEMLEAGIKPDHVTFTAVLSA 182
           L+ AR+VF  T  RS I+WT+IIS+ AAHG+   AL LFN+M+ AG KPD VTFT VLSA
Sbjct: 406 LDTARKVFKLTEHRSTIVWTSIISAVAAHGEAVEALSLFNQMITAGAKPDTVTFTTVLSA 465

Query: 183 CAHAGAVDEARRIFDAMLPAYGVPPKME 266
           CAH+G V EAR++F++M   +G+ P +E
Sbjct: 466 CAHSGKVAEARKVFNSMQAVFGISPVIE 493


>ref|XP_006345726.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37310-like [Solanum tuberosum]
          Length = 654

 Score =  106 bits (264), Expect = 4e-21
 Identities = 53/88 (60%), Positives = 69/88 (78%)
 Frame = +3

Query: 3   LEAARRVFDATTSRSLIIWTAIISSYAAHGDVEAALHLFNEMLEAGIKPDHVTFTAVLSA 182
           +++AR+VFD T  RS+IIWTAIIS+YA HG+ +AAL LFN ML   I+PD VTFTAVL+A
Sbjct: 414 IQSARQVFDHTKDRSVIIWTAIISAYANHGEAKAALDLFNVMLSHCIRPDSVTFTAVLAA 473

Query: 183 CAHAGAVDEARRIFDAMLPAYGVPPKME 266
           CAH+G ++EA RIF+ +L  YG+ P  E
Sbjct: 474 CAHSGLIEEAWRIFE-LLEKYGIQPPDE 500


>tpg|DAA44778.1| TPA: hypothetical protein ZEAMMB73_421222 [Zea mays]
          Length = 595

 Score =  105 bits (263), Expect = 5e-21
 Identities = 50/88 (56%), Positives = 66/88 (75%)
 Frame = +3

Query: 3   LEAARRVFDATTSRSLIIWTAIISSYAAHGDVEAALHLFNEMLEAGIKPDHVTFTAVLSA 182
           L+ +RRVF  T  RS I+WT+IIS+ AAHG+   ALHLFNEM+ AGI+ D + FTAVL+A
Sbjct: 403 LDGSRRVFKLTDDRSEIVWTSIISAVAAHGEAAEALHLFNEMVNAGIRLDTIAFTAVLTA 462

Query: 183 CAHAGAVDEARRIFDAMLPAYGVPPKME 266
           CAH G V +AR+IF++M   +G+ P ME
Sbjct: 463 CAHTGKVADARKIFNSMQAMFGINPVME 490



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
 Frame = +3

Query: 9   AARRVFDATTSRSLIIWTAIISSYAAHGDVEAALHLFNEMLE----AGIKPDHVTFTAVL 176
           +AR VFD    R ++ W ++ISSYA  G     L LF E+       G++P++VT  +VL
Sbjct: 168 SARAVFDEMPRRDVVSWNSLISSYARAGWYRQCLELFQELASVHGAGGVRPNNVTVASVL 227

Query: 177 SACAHAGAVDEARRI 221
            ACA   AVD   R+
Sbjct: 228 HACAQLKAVDFGVRV 242


>ref|XP_003561748.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37310-like [Brachypodium distachyon]
          Length = 596

 Score =  105 bits (263), Expect = 5e-21
 Identities = 50/88 (56%), Positives = 66/88 (75%)
 Frame = +3

Query: 3   LEAARRVFDATTSRSLIIWTAIISSYAAHGDVEAALHLFNEMLEAGIKPDHVTFTAVLSA 182
           L+ A++VF+   +RS I+WT+II++ AAHGDV AAL LFN+M+ AG  PD VTFT VL+A
Sbjct: 404 LDMAKKVFEWDENRSTIVWTSIIAAVAAHGDVAAALGLFNQMVRAGTCPDTVTFTVVLTA 463

Query: 183 CAHAGAVDEARRIFDAMLPAYGVPPKME 266
           CAH G V EAR +FD+M   +G+ P ME
Sbjct: 464 CAHVGKVAEAREVFDSMQTVFGISPVME 491


>ref|XP_003541398.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37310-like [Glycine max]
          Length = 667

 Score =  105 bits (263), Expect = 5e-21
 Identities = 52/85 (61%), Positives = 66/85 (77%)
 Frame = +3

Query: 12  ARRVFDATTSRSLIIWTAIISSYAAHGDVEAALHLFNEMLEAGIKPDHVTFTAVLSACAH 191
           AR VFD + SRSLIIWT+IIS+YAAHGD   AL L+ +ML+ GI+PD VT T+VL+ACAH
Sbjct: 427 ARWVFDLSQSRSLIIWTSIISAYAAHGDAGLALGLYAQMLDKGIRPDPVTLTSVLTACAH 486

Query: 192 AGAVDEARRIFDAMLPAYGVPPKME 266
           +G VDEA  IF++M   YG+ P +E
Sbjct: 487 SGLVDEAWNIFNSMPSKYGIQPLVE 511


>gb|EMT16897.1| hypothetical protein F775_01269 [Aegilops tauschii]
          Length = 596

 Score =  105 bits (261), Expect = 8e-21
 Identities = 51/88 (57%), Positives = 64/88 (72%)
 Frame = +3

Query: 3   LEAARRVFDATTSRSLIIWTAIISSYAAHGDVEAALHLFNEMLEAGIKPDHVTFTAVLSA 182
           L+ AR+VF+   +RS I WT+IIS+ AAHGDV  AL LFN+M+ AG +PD VTFT VL+A
Sbjct: 404 LDMARKVFELHENRSTIAWTSIISAVAAHGDVTEALDLFNQMVSAGTRPDTVTFTVVLTA 463

Query: 183 CAHAGAVDEARRIFDAMLPAYGVPPKME 266
           CAHAG V EAR  F +M   +G+ P ME
Sbjct: 464 CAHAGKVTEAREFFHSMQAMFGISPVME 491



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 4/72 (5%)
 Frame = +3

Query: 3   LEAARRVFDATTSRSLIIWTAIISSYAAHGDVEAALHLFNEMLEA----GIKPDHVTFTA 170
           + +AR VFD    + ++ W ++IS+YA+ G     L LF+E+++A    G++P+ VT T+
Sbjct: 167 MRSARAVFDQMPRKDVVSWNSLISAYASGGWYAECLELFHELVQACAGSGVRPNSVTVTS 226

Query: 171 VLSACAHAGAVD 206
           VL ACA   AVD
Sbjct: 227 VLHACAQLKAVD 238