BLASTX nr result

ID: Zingiber23_contig00038898 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00038898
         (525 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003615432.1| hypothetical protein MTR_5g067940 [Medicago ...    87   2e-15
ref|XP_003605622.1| hypothetical protein MTR_4g035030 [Medicago ...    73   4e-11
tpg|DAA62789.1| TPA: hypothetical protein ZEAMMB73_456670 [Zea m...    59   7e-07
tpg|DAA39238.1| TPA: hypothetical protein ZEAMMB73_219766 [Zea m...    41   9e-06

>ref|XP_003615432.1| hypothetical protein MTR_5g067940 [Medicago truncatula]
           gi|355516767|gb|AES98390.1| hypothetical protein
           MTR_5g067940 [Medicago truncatula]
          Length = 69

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 48/69 (69%), Positives = 51/69 (73%), Gaps = 7/69 (10%)
 Frame = -1

Query: 303 MAKLVDATDLIGLSLSKETC*VVTSKFRETLEFKMGNPEPNP*F-------YQTRIKKRI 145
           MA+LVDATDLIGLSL  ET  V T KFRETLE KMGNPEPNP F        ++  KKRI
Sbjct: 1   MAELVDATDLIGLSLGMETYQVKTFKFRETLELKMGNPEPNPSFRKQINKSLESENKKRI 60

Query: 144 GAETQWKLF 118
           GAETQWKLF
Sbjct: 61  GAETQWKLF 69


>ref|XP_003605622.1| hypothetical protein MTR_4g035030 [Medicago truncatula]
           gi|357471517|ref|XP_003606043.1| hypothetical protein
           MTR_4g051230 [Medicago truncatula]
           gi|358349395|ref|XP_003638723.1| hypothetical protein
           MTR_141s0027 [Medicago truncatula]
           gi|355504658|gb|AES85861.1| hypothetical protein
           MTR_141s0027 [Medicago truncatula]
           gi|355506677|gb|AES87819.1| hypothetical protein
           MTR_4g035030 [Medicago truncatula]
           gi|355507098|gb|AES88240.1| hypothetical protein
           MTR_4g051230 [Medicago truncatula]
          Length = 95

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 40/61 (65%), Positives = 46/61 (75%)
 Frame = -1

Query: 303 MAKLVDATDLIGLSLSKETC*VVTSKFRETLEFKMGNPEPNP*FYQTRIKKRIGAETQWK 124
           MAKLVDATDLIGLSL  ET  V T KFRETLE KMGNPEPNP F + +I K + +E Q +
Sbjct: 1   MAKLVDATDLIGLSLGMETYQVKTFKFRETLELKMGNPEPNPSF-RKQINKSLESENQKR 59

Query: 123 L 121
           +
Sbjct: 60  I 60


>tpg|DAA62789.1| TPA: hypothetical protein ZEAMMB73_456670 [Zea mays]
          Length = 73

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 28/32 (87%), Positives = 28/32 (87%)
 Frame = +3

Query: 177 KDLAQDCPF*IPGFL*IWKLPLSRFPY*GSIQ 272
           KDLAQDCPF I GFL IWKLPLSRFPY GSIQ
Sbjct: 39  KDLAQDCPFFIRGFLGIWKLPLSRFPYQGSIQ 70


>tpg|DAA39238.1| TPA: hypothetical protein ZEAMMB73_219766 [Zea mays]
          Length = 60

 Score = 40.8 bits (94), Expect(2) = 9e-06
 Identities = 19/21 (90%), Positives = 20/21 (95%)
 Frame = +2

Query: 179 GFGSGLPILNSRVSLNLEVTT 241
           GFGSGLPI +SRVSLNLEVTT
Sbjct: 40  GFGSGLPIFHSRVSLNLEVTT 60



 Score = 34.3 bits (77), Expect(2) = 9e-06
 Identities = 16/26 (61%), Positives = 18/26 (69%)
 Frame = +1

Query: 97  RSQLHSLEQLPLSLCTYPFFYSSLIK 174
           R    SLEQLPLSLCTYPF   S ++
Sbjct: 7   RYYFDSLEQLPLSLCTYPFPLGSSLR 32


Top