BLASTX nr result

ID: Zingiber23_contig00037989 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00037989
         (992 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ18478.1| hypothetical protein PRUPE_ppa017633mg [Prunus pe...   402   e-109
gb|EXB38041.1| hypothetical protein L484_020960 [Morus notabilis]     400   e-109
ref|XP_002532904.1| pentatricopeptide repeat-containing protein,...   399   e-109
ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containi...   398   e-108
ref|XP_004306116.1| PREDICTED: pentatricopeptide repeat-containi...   394   e-107
gb|ESW11550.1| hypothetical protein PHAVU_008G039700g [Phaseolus...   393   e-107
ref|XP_002305377.2| hypothetical protein POPTR_0004s12430g [Popu...   392   e-106
ref|XP_004155878.1| PREDICTED: pentatricopeptide repeat-containi...   392   e-106
ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containi...   392   e-106
ref|XP_006395295.1| hypothetical protein EUTSA_v10003866mg [Eutr...   390   e-106
ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containi...   389   e-106
ref|XP_006338411.1| PREDICTED: pentatricopeptide repeat-containi...   389   e-106
gb|EOY03563.1| Tetratricopeptide repeat (TPR)-like superfamily p...   386   e-105
ref|XP_004232191.1| PREDICTED: pentatricopeptide repeat-containi...   385   e-104
ref|NP_189568.1| pentatricopeptide repeat-containing protein [Ar...   384   e-104
ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containi...   384   e-104
ref|XP_002875497.1| pentatricopeptide repeat-containing protein ...   379   e-102
ref|XP_006290777.1| hypothetical protein CARUB_v10016882mg [Caps...   378   e-102
ref|XP_006482717.1| PREDICTED: pentatricopeptide repeat-containi...   370   e-100
ref|XP_006431260.1| hypothetical protein CICLE_v10011308mg [Citr...   370   e-100

>gb|EMJ18478.1| hypothetical protein PRUPE_ppa017633mg [Prunus persica]
          Length = 603

 Score =  402 bits (1033), Expect = e-109
 Identities = 196/329 (59%), Positives = 249/329 (75%)
 Frame = +2

Query: 5    HLRQIQAQILKADLHRDLFVAPKLISAYSLCRQVLPAVAVFRQVPFPNAHLYNVLIRAFA 184
            H++Q+ AQILKA+LH+DL  APKLI+A+SLCRQ+  AV VF QV  PN HLYN LIRA  
Sbjct: 32   HIKQVHAQILKANLHQDLHTAPKLIAAFSLCRQMALAVNVFNQVQDPNVHLYNTLIRAHI 91

Query: 185  DNSQPSLAFSTFSQMQKDGIFPDKFTYSCLLRGCSGTSSFSRVLMIHAHVLKFGFLSDIF 364
             NSQ + AF+TF  MQ +G++PD FTY  LL+ CSG   F  V MIH  + KFGF  DIF
Sbjct: 92   QNSQTTQAFATFFDMQLNGVYPDNFTYPFLLKACSGRPWFPVVQMIHTSIEKFGFCLDIF 151

Query: 365  VPNALIDSYSKTSAAGFAEAKKVFDGMPEKDVVSWNSILXXXXXXXXXXXXXQLFEEMPE 544
            VPN+LID+YSK    G +EAKK+F  M E+D+VSWNS++             +LF+EMP+
Sbjct: 152  VPNSLIDTYSKCGLLGVSEAKKMFMLMGERDIVSWNSMIGGLAKTGELGEARRLFDEMPD 211

Query: 545  RDIISWNTLLDGLAKAGEMESVFDLFGRMPERNVVSWSTILSGYCKSGDLEMARALFDKM 724
            +D +SWNT+LDG AKAG+M   F+LF RMP+RNVVSWST++SGY K+GD+ MAR +FDKM
Sbjct: 212  KDAVSWNTILDGYAKAGQMNEAFELFERMPQRNVVSWSTLVSGYSKAGDMGMARMMFDKM 271

Query: 725  PVKNLVTWTIIITGYAEKGQAKEASRLLDQMEEASLEFDVAATVSILAACAESGLLSLGK 904
            P +NLV WTIII+GYAEKG AKEA  L DQMEEA L+ D  A +SILAACAESGL+ LG+
Sbjct: 272  PFRNLVPWTIIISGYAEKGLAKEAIMLYDQMEEAGLKPDNGAIISILAACAESGLIGLGR 331

Query: 905  RIHSYVKRSKLRLSTHVSNALIDMYSKCG 991
            ++H+ ++R++ + ST VSNAL+DMY+KCG
Sbjct: 332  KVHASIERTRFKCSTPVSNALLDMYAKCG 360


>gb|EXB38041.1| hypothetical protein L484_020960 [Morus notabilis]
          Length = 599

 Score =  400 bits (1027), Expect = e-109
 Identities = 193/329 (58%), Positives = 245/329 (74%)
 Frame = +2

Query: 5    HLRQIQAQILKADLHRDLFVAPKLISAYSLCRQVLPAVAVFRQVPFPNAHLYNVLIRAFA 184
            H++Q+ AQI++A+LH D FVAPKLI+A+SLCRQ+  AV VF Q+P PN H++N +IRA  
Sbjct: 34   HIKQLHAQIIRANLHLDPFVAPKLIAAFSLCRQIALAVNVFDQIPEPNVHVFNAMIRAHT 93

Query: 185  DNSQPSLAFSTFSQMQKDGIFPDKFTYSCLLRGCSGTSSFSRVLMIHAHVLKFGFLSDIF 364
             NSQ   AF+ F  MQ +G+ PD +TYS LL+ CSG +  S V M+H H+ K GF SDIF
Sbjct: 94   QNSQGPQAFAAFFNMQSNGVSPDNYTYSFLLKACSGKAWLSVVQMVHTHIEKCGFCSDIF 153

Query: 365  VPNALIDSYSKTSAAGFAEAKKVFDGMPEKDVVSWNSILXXXXXXXXXXXXXQLFEEMPE 544
            VPNALIDSYSK    G   AKK+F  M  +DVVSWNS++             QLF+EMPE
Sbjct: 154  VPNALIDSYSKCGPVGVFAAKKLFLAMGVRDVVSWNSMVGGLVKVGELGEARQLFDEMPE 213

Query: 545  RDIISWNTLLDGLAKAGEMESVFDLFGRMPERNVVSWSTILSGYCKSGDLEMARALFDKM 724
            RD+++WNT+LDG  KAG+M   F+ F RMPERNVVSWSTI+SGY ++GD++MAR LFDKM
Sbjct: 214  RDLVTWNTMLDGYVKAGQMSEAFEFFQRMPERNVVSWSTIVSGYSRAGDMDMARILFDKM 273

Query: 725  PVKNLVTWTIIITGYAEKGQAKEASRLLDQMEEASLEFDVAATVSILAACAESGLLSLGK 904
            PVKNLVTWTII++GYA KG A EA+ L DQME+A L+FD    +S+LAACAESGLL LG+
Sbjct: 274  PVKNLVTWTIIVSGYAAKGIANEANSLYDQMEDAGLKFDDGTIISVLAACAESGLLGLGE 333

Query: 905  RIHSYVKRSKLRLSTHVSNALIDMYSKCG 991
            ++H+ + R + R  T VSNAL+DMY+KCG
Sbjct: 334  KVHASMDRIRYRCCTPVSNALVDMYAKCG 362


>ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223527338|gb|EEF29484.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 604

 Score =  399 bits (1026), Expect = e-109
 Identities = 195/330 (59%), Positives = 245/330 (74%)
 Frame = +2

Query: 2    DHLRQIQAQILKADLHRDLFVAPKLISAYSLCRQVLPAVAVFRQVPFPNAHLYNVLIRAF 181
            +H++++ AQI+K +LH DL+VAPKLISA+SLC Q+  AV VF Q+  PN HLYN LIRA 
Sbjct: 37   NHIKEVHAQIIKRNLHNDLYVAPKLISAFSLCHQMNLAVNVFNQIQDPNVHLYNTLIRAH 96

Query: 182  ADNSQPSLAFSTFSQMQKDGIFPDKFTYSCLLRGCSGTSSFSRVLMIHAHVLKFGFLSDI 361
              NSQ   AF+TF  MQK+G+F D FTY  LL+ C+G      V MIH HV K+GF  D+
Sbjct: 97   VQNSQSLKAFATFFDMQKNGLFADNFTYPFLLKACNGKGWLPTVQMIHCHVEKYGFFGDL 156

Query: 362  FVPNALIDSYSKTSAAGFAEAKKVFDGMPEKDVVSWNSILXXXXXXXXXXXXXQLFEEMP 541
            FVPN+LIDSYSK    G   A K+F  M EKD+VSWNS++             +LF+EM 
Sbjct: 157  FVPNSLIDSYSKCGLLGVNYAMKLFMEMGEKDLVSWNSMIGGLVKAGDLGRARKLFDEMA 216

Query: 542  ERDIISWNTLLDGLAKAGEMESVFDLFGRMPERNVVSWSTILSGYCKSGDLEMARALFDK 721
            ERD +SWNT+LDG  KAGEM   F+LF +MPERNVVSWST++SGYCK+GD+EMAR LFDK
Sbjct: 217  ERDAVSWNTILDGYVKAGEMSQAFNLFEKMPERNVVSWSTMVSGYCKTGDMEMARMLFDK 276

Query: 722  MPVKNLVTWTIIITGYAEKGQAKEASRLLDQMEEASLEFDVAATVSILAACAESGLLSLG 901
            MP KNLVTWTIII+G+AEKG AKEA+ L +QME A L+ D    +SILAACAESGLL LG
Sbjct: 277  MPFKNLVTWTIIISGFAEKGLAKEATTLYNQMEAAGLKPDDGTLISILAACAESGLLVLG 336

Query: 902  KRIHSYVKRSKLRLSTHVSNALIDMYSKCG 991
            K++H+ +K+ +++ S +VSNAL+DMY+KCG
Sbjct: 337  KKVHASIKKIRIKCSVNVSNALVDMYAKCG 366


>ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230-like
            [Glycine max]
          Length = 604

 Score =  398 bits (1022), Expect = e-108
 Identities = 197/331 (59%), Positives = 243/331 (73%), Gaps = 1/331 (0%)
 Frame = +2

Query: 2    DHLRQIQAQILKADLHRDLFVAPKLISAYSLCRQVLPAVAVFRQVPFPNAHLYNVLIRAF 181
            D + QI AQ+LKA+LH+DLFVAPKLI+A+SLCR +  AV VF  VP PN HLYN +IRA 
Sbjct: 35   DSVNQIHAQVLKANLHQDLFVAPKLIAAFSLCRHLASAVNVFNHVPHPNVHLYNSIIRAH 94

Query: 182  ADN-SQPSLAFSTFSQMQKDGIFPDKFTYSCLLRGCSGTSSFSRVLMIHAHVLKFGFLSD 358
            A N S PSL F+ F QMQK+G+FPD FTY  LL+ C+G SS   V MIHAHV KFGF  D
Sbjct: 95   AHNTSHPSLPFNAFFQMQKNGLFPDNFTYPFLLKACTGPSSLPLVRMIHAHVEKFGFYGD 154

Query: 359  IFVPNALIDSYSKTSAAGFAEAKKVFDGMPEKDVVSWNSILXXXXXXXXXXXXXQLFEEM 538
            IFVPN+LIDSYS+  +AG   A  +F  M E+DVV+WNS++             +LF+EM
Sbjct: 155  IFVPNSLIDSYSRCGSAGLDGAMSLFLAMKERDVVTWNSMIGGLVRCGELEGACKLFDEM 214

Query: 539  PERDIISWNTLLDGLAKAGEMESVFDLFGRMPERNVVSWSTILSGYCKSGDLEMARALFD 718
            PERD++SWNT+LDG AKAGEM+  F+LF RMP+RN+VSWST++ GY K GD++MAR LFD
Sbjct: 215  PERDMVSWNTMLDGYAKAGEMDRAFELFERMPQRNIVSWSTMVCGYSKGGDMDMARVLFD 274

Query: 719  KMPVKNLVTWTIIITGYAEKGQAKEASRLLDQMEEASLEFDVAATVSILAACAESGLLSL 898
            + P KN+V WT II GYAEKG  +EA+ L  +MEEA L  D    +SILAACAESG+L L
Sbjct: 275  RCPAKNVVLWTTIIAGYAEKGFVREATELYGKMEEAGLRPDDGFLISILAACAESGMLGL 334

Query: 899  GKRIHSYVKRSKLRLSTHVSNALIDMYSKCG 991
            GKRIH+ ++R + R  T V NA IDMY+KCG
Sbjct: 335  GKRIHASMRRWRFRCGTKVLNAFIDMYAKCG 365


>ref|XP_004306116.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230-like
            [Fragaria vesca subsp. vesca]
          Length = 605

 Score =  394 bits (1011), Expect = e-107
 Identities = 192/329 (58%), Positives = 241/329 (73%)
 Frame = +2

Query: 5    HLRQIQAQILKADLHRDLFVAPKLISAYSLCRQVLPAVAVFRQVPFPNAHLYNVLIRAFA 184
            H++Q+ AQILKA LH+D   APKLI+A+SLCR +  AV VF QV  PN HLYN LIRA  
Sbjct: 34   HIKQVHAQILKAHLHQDPHTAPKLIAAFSLCRHMALAVNVFNQVHHPNVHLYNTLIRAHI 93

Query: 185  DNSQPSLAFSTFSQMQKDGIFPDKFTYSCLLRGCSGTSSFSRVLMIHAHVLKFGFLSDIF 364
             N+QPS AF+ F  MQ  G++PD FT+  LL+ CSG      VLMIHA + KFGF  DIF
Sbjct: 94   HNNQPSQAFAAFFDMQAHGVYPDNFTFPFLLKACSGKGYLHVVLMIHAQIEKFGFCGDIF 153

Query: 365  VPNALIDSYSKTSAAGFAEAKKVFDGMPEKDVVSWNSILXXXXXXXXXXXXXQLFEEMPE 544
            VPN+LID+YSK    G   A+K+F  M EKD+VSWNS++             QLF+EMPE
Sbjct: 154  VPNSLIDTYSKCGLEGVGAARKLFRVMEEKDIVSWNSMIGGLARAGELSDARQLFDEMPE 213

Query: 545  RDIISWNTLLDGLAKAGEMESVFDLFGRMPERNVVSWSTILSGYCKSGDLEMARALFDKM 724
            RD +SWN++LDG AKAG+M+  F+LF RMP+RNVVSWST++SGY K GD+ MAR +FD+M
Sbjct: 214  RDAVSWNSILDGYAKAGKMDEAFELFERMPQRNVVSWSTLVSGYSKVGDMGMARMMFDRM 273

Query: 725  PVKNLVTWTIIITGYAEKGQAKEASRLLDQMEEASLEFDVAATVSILAACAESGLLSLGK 904
            P KNLV WTIII+GYA+KG AKEA  L DQME   L+ D  A +SILAACAESGL++LGK
Sbjct: 274  PFKNLVPWTIIISGYAQKGLAKEAIMLYDQMEGDGLKLDNGAIISILAACAESGLIALGK 333

Query: 905  RIHSYVKRSKLRLSTHVSNALIDMYSKCG 991
            ++H  ++R++ + ST V NAL+DMY+KCG
Sbjct: 334  KVHESIERNRFKCSTPVLNALLDMYAKCG 362


>gb|ESW11550.1| hypothetical protein PHAVU_008G039700g [Phaseolus vulgaris]
          Length = 604

 Score =  393 bits (1009), Expect = e-107
 Identities = 194/331 (58%), Positives = 243/331 (73%), Gaps = 1/331 (0%)
 Frame = +2

Query: 2    DHLRQIQAQILKADLHRDLFVAPKLISAYSLCRQVLPAVAVFRQVPFPNAHLYNVLIRAF 181
            +H+ QI AQILKA+LH DLFVAPKLI+A+SLCR +  AV VF Q+P PN HLYN +IRA 
Sbjct: 35   NHVNQIHAQILKANLHHDLFVAPKLIAAFSLCRHLASAVNVFNQLPHPNVHLYNSIIRAH 94

Query: 182  ADN-SQPSLAFSTFSQMQKDGIFPDKFTYSCLLRGCSGTSSFSRVLMIHAHVLKFGFLSD 358
            A N S PSL F+TF QM K G+FPD FTY  LL+ C+ +SS   V MIHAHV KFG  +D
Sbjct: 95   AHNHSHPSLPFNTFLQMLKSGLFPDNFTYPSLLKACTDSSSLPLVRMIHAHVEKFGLYAD 154

Query: 359  IFVPNALIDSYSKTSAAGFAEAKKVFDGMPEKDVVSWNSILXXXXXXXXXXXXXQLFEEM 538
            IFVPN+LIDSYS+  ++G   A  +F  M E+DVV+WNS++             +LF+EM
Sbjct: 155  IFVPNSLIDSYSRCGSSGLDGAMSLFLAMEERDVVTWNSMIGGLVRCGELERARKLFDEM 214

Query: 539  PERDIISWNTLLDGLAKAGEMESVFDLFGRMPERNVVSWSTILSGYCKSGDLEMARALFD 718
            PERD++SWNT+LDG  KAGEM+  FDLF ++PERN+VSWST++ GY K+GD++MAR LFD
Sbjct: 215  PERDMVSWNTMLDGYTKAGEMDKAFDLFEKIPERNIVSWSTMVCGYSKAGDIDMARMLFD 274

Query: 719  KMPVKNLVTWTIIITGYAEKGQAKEASRLLDQMEEASLEFDVAATVSILAACAESGLLSL 898
            K P KN+V WT II GYAEKG A+EA+ L  +MEEA L  D     SILAACA+SG+L L
Sbjct: 275  KCPGKNVVLWTTIIAGYAEKGNAREATELYGKMEEAGLRPDDGFLFSILAACAKSGMLEL 334

Query: 899  GKRIHSYVKRSKLRLSTHVSNALIDMYSKCG 991
            G+R+H+ VK+ + R  T V NA IDMY+KCG
Sbjct: 335  GRRVHASVKKLRFRCGTKVLNAFIDMYAKCG 365



 Score = 76.6 bits (187), Expect = 1e-11
 Identities = 69/294 (23%), Positives = 117/294 (39%), Gaps = 45/294 (15%)
 Frame = +2

Query: 74   LISAYSLCRQVLPAVAVFRQVPFPNAHLYNVLIRAFADNSQPSLAFSTFSQMQKDGIFPD 253
            ++  YS    +  A  +F + P  N  L+  +I  +A+      A   + +M++ G+ PD
Sbjct: 256  MVCGYSKAGDIDMARMLFDKCPGKNVVLWTTIIAGYAEKGNAREATELYGKMEEAGLRPD 315

Query: 254  KFTYSCLLRGCSGTSSFSRVLMIHAHVLKFGFLSDIFVPNALIDSYSKTSAAGFAEAKKV 433
                  +L  C+ +        +HA V K  F     V NA ID Y+K        A  V
Sbjct: 316  DGFLFSILAACAKSGMLELGRRVHASVKKLRFRCGTKVLNAFIDMYAKCGCLD--AASDV 373

Query: 434  FDGM-PEKDVVSWNSILXXXXXXXXXXXXXQLFEEM------PER--------------- 547
            F GM  +KDVVSWNS++             +LF  M      P+R               
Sbjct: 374  FSGMMAKKDVVSWNSMIQAFAMHGHGKKALELFSRMVDEGFEPDRCTFVGLLCACTHAGL 433

Query: 548  -------------------DIISWNTLLDGLAKAGEMESVFDLFGRMP-ERNVVSWSTIL 667
                               +I  +  ++D L + G +E  F L  RMP E N +   T+L
Sbjct: 434  VNEGRKCFYSMEKVFGIVPEIDHYGCMVDLLGRGGHLEEAFMLLRRMPMEPNAIILGTLL 493

Query: 668  SGYCKSGDLEMARALFD---KMPVKNLVTWTIIITGYAEKGQAKEASRLLDQME 820
            +      D+++ RA+ +   K+   +   ++++   YA+ G     + +  QM+
Sbjct: 494  NACRMHNDVDLGRAVCEQLFKLEPSDAGNYSLLSNIYAQAGDWMNVANIRLQMK 547


>ref|XP_002305377.2| hypothetical protein POPTR_0004s12430g [Populus trichocarpa]
            gi|550340897|gb|EEE85888.2| hypothetical protein
            POPTR_0004s12430g [Populus trichocarpa]
          Length = 604

 Score =  392 bits (1006), Expect = e-106
 Identities = 188/330 (56%), Positives = 243/330 (73%)
 Frame = +2

Query: 2    DHLRQIQAQILKADLHRDLFVAPKLISAYSLCRQVLPAVAVFRQVPFPNAHLYNVLIRAF 181
            +H++Q+ AQILK +LH+DL+VAPKLISA+SL +++  A+ VF+Q+P PN HLYN  IRA 
Sbjct: 37   NHIKQVHAQILKQNLHQDLYVAPKLISAFSLSQEMTLAINVFKQIPDPNVHLYNTFIRAC 96

Query: 182  ADNSQPSLAFSTFSQMQKDGIFPDKFTYSCLLRGCSGTSSFSRVLMIHAHVLKFGFLSDI 361
              NS   LAF TF +MQ++G+F D FTY  LL+ C G S    V MIH H+ K+GF  D+
Sbjct: 97   VQNSHSLLAFETFFEMQRNGLFADNFTYPFLLKACDGQSWLPLVKMIHNHLEKYGFFQDL 156

Query: 362  FVPNALIDSYSKTSAAGFAEAKKVFDGMPEKDVVSWNSILXXXXXXXXXXXXXQLFEEMP 541
            FVPN+LIDSY K    G   A ++F  M E+DVVSWNS++             +LF+EMP
Sbjct: 157  FVPNSLIDSYCKCGLLGVKSAMRLFKVMDERDVVSWNSMIRGLLKVGELSEACKLFDEMP 216

Query: 542  ERDIISWNTLLDGLAKAGEMESVFDLFGRMPERNVVSWSTILSGYCKSGDLEMARALFDK 721
             +D +SWNT+LDG  KAGEM   F LF  MPERNVVSWST++SGYCK+GD+EMAR LFD+
Sbjct: 217  MKDAVSWNTILDGYVKAGEMNKAFGLFESMPERNVVSWSTMVSGYCKAGDMEMARMLFDR 276

Query: 722  MPVKNLVTWTIIITGYAEKGQAKEASRLLDQMEEASLEFDVAATVSILAACAESGLLSLG 901
            MPVKNLV+WTII++GYA KG AK+A R  +QMEEA L+ D    +SILA+CAESGLL LG
Sbjct: 277  MPVKNLVSWTIIVSGYAVKGLAKDAIRSFEQMEEAGLKPDDGTIISILASCAESGLLGLG 336

Query: 902  KRIHSYVKRSKLRLSTHVSNALIDMYSKCG 991
            KR+H+ ++R + + S +VSNAL+DMY+KCG
Sbjct: 337  KRVHTSIERIRYKCSVNVSNALVDMYAKCG 366


>ref|XP_004155878.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230-like
            [Cucumis sativus]
          Length = 561

 Score =  392 bits (1006), Expect = e-106
 Identities = 189/331 (57%), Positives = 247/331 (74%), Gaps = 1/331 (0%)
 Frame = +2

Query: 2    DHLRQIQAQILKADLHRDLFVAPKLISAYSLCRQVLPAVAVFRQVPFPNAHLYNVLIRAF 181
            + ++Q+ AQILK++LH DLFV PKLISA+SLCRQ+L A   F QV +PN HLYN +IRA 
Sbjct: 60   NQVKQLHAQILKSNLHVDLFVVPKLISAFSLCRQMLLATNAFNQVQYPNVHLYNTMIRAH 119

Query: 182  ADNSQPSLAFSTFSQMQKDGIFPDKFTYSCLLRGCSGTSSFSRVLMIHAHVLKFGFLSDI 361
            + NSQPS AF+TF  MQ+DG + D FT+  LL+ C+G      +  +HA + KFGF+SD+
Sbjct: 120  SHNSQPSQAFATFFAMQRDGHYADNFTFPFLLKVCTGNVWLPVIESVHAQIEKFGFMSDV 179

Query: 362  FVPNALIDSYSKTSAAGFAEAKKVFDGM-PEKDVVSWNSILXXXXXXXXXXXXXQLFEEM 538
            FVPN+LIDSYSK  + G + AKK+F  M   +DVVSWNS++             ++F+EM
Sbjct: 180  FVPNSLIDSYSKCGSCGISAAKKLFVSMGARRDVVSWNSMISGLAKGGLYEEARKVFDEM 239

Query: 539  PERDIISWNTLLDGLAKAGEMESVFDLFGRMPERNVVSWSTILSGYCKSGDLEMARALFD 718
            PE+D ISWNT+LDG  K G+M+  F LF  MPERNVVSWST++ GYCK+GD+EMAR LFD
Sbjct: 240  PEKDGISWNTMLDGYVKVGKMDDAFKLFDEMPERNVVSWSTMVLGYCKAGDMEMARMLFD 299

Query: 719  KMPVKNLVTWTIIITGYAEKGQAKEASRLLDQMEEASLEFDVAATVSILAACAESGLLSL 898
            KMPVKNLV+WTII++G+AEKG A+EA  L DQME+A L+ D    +SILAACAESGLL L
Sbjct: 300  KMPVKNLVSWTIIVSGFAEKGLAREAISLFDQMEKACLKLDNGTVMSILAACAESGLLGL 359

Query: 899  GKRIHSYVKRSKLRLSTHVSNALIDMYSKCG 991
            G++IH+ +K +  + +T +SNAL+DMY+KCG
Sbjct: 360  GEKIHASIKNNNFKCTTEISNALVDMYAKCG 390


>ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230-like
            [Cucumis sativus]
          Length = 601

 Score =  392 bits (1006), Expect = e-106
 Identities = 189/331 (57%), Positives = 247/331 (74%), Gaps = 1/331 (0%)
 Frame = +2

Query: 2    DHLRQIQAQILKADLHRDLFVAPKLISAYSLCRQVLPAVAVFRQVPFPNAHLYNVLIRAF 181
            + ++Q+ AQILK++LH DLFV PKLISA+SLCRQ+L A   F QV +PN HLYN +IRA 
Sbjct: 34   NQVKQLHAQILKSNLHVDLFVVPKLISAFSLCRQMLLATNAFNQVQYPNVHLYNTMIRAH 93

Query: 182  ADNSQPSLAFSTFSQMQKDGIFPDKFTYSCLLRGCSGTSSFSRVLMIHAHVLKFGFLSDI 361
            + NSQPS AF+TF  MQ+DG + D FT+  LL+ C+G      +  +HA + KFGF+SD+
Sbjct: 94   SHNSQPSQAFATFFAMQRDGHYADNFTFPFLLKVCTGNVWLPVIESVHAQIEKFGFMSDV 153

Query: 362  FVPNALIDSYSKTSAAGFAEAKKVFDGM-PEKDVVSWNSILXXXXXXXXXXXXXQLFEEM 538
            FVPN+LIDSYSK  + G + AKK+F  M   +DVVSWNS++             ++F+EM
Sbjct: 154  FVPNSLIDSYSKCGSCGISAAKKLFVSMGARRDVVSWNSMISGLAKGGLYEEARKVFDEM 213

Query: 539  PERDIISWNTLLDGLAKAGEMESVFDLFGRMPERNVVSWSTILSGYCKSGDLEMARALFD 718
            PE+D ISWNT+LDG  K G+M+  F LF  MPERNVVSWST++ GYCK+GD+EMAR LFD
Sbjct: 214  PEKDGISWNTMLDGYVKVGKMDDAFKLFDEMPERNVVSWSTMVLGYCKAGDMEMARMLFD 273

Query: 719  KMPVKNLVTWTIIITGYAEKGQAKEASRLLDQMEEASLEFDVAATVSILAACAESGLLSL 898
            KMPVKNLV+WTII++G+AEKG A+EA  L DQME+A L+ D    +SILAACAESGLL L
Sbjct: 274  KMPVKNLVSWTIIVSGFAEKGLAREAISLFDQMEKACLKLDNGTVMSILAACAESGLLGL 333

Query: 899  GKRIHSYVKRSKLRLSTHVSNALIDMYSKCG 991
            G++IH+ +K +  + +T +SNAL+DMY+KCG
Sbjct: 334  GEKIHASIKNNNFKCTTEISNALVDMYAKCG 364


>ref|XP_006395295.1| hypothetical protein EUTSA_v10003866mg [Eutrema salsugineum]
            gi|557091934|gb|ESQ32581.1| hypothetical protein
            EUTSA_v10003866mg [Eutrema salsugineum]
          Length = 598

 Score =  390 bits (1003), Expect = e-106
 Identities = 196/328 (59%), Positives = 238/328 (72%)
 Frame = +2

Query: 8    LRQIQAQILKADLHRDLFVAPKLISAYSLCRQVLPAVAVFRQVPFPNAHLYNVLIRAFAD 187
            ++Q+ AQI++ +LH+DL +APKLI+A SLCRQ+  AV VF QV  PN HL N LIRA A 
Sbjct: 35   VKQLHAQIIRRNLHQDLHIAPKLITALSLCRQMTLAVGVFNQVQQPNVHLCNSLIRAHAQ 94

Query: 188  NSQPSLAFSTFSQMQKDGIFPDKFTYSCLLRGCSGTSSFSRVLMIHAHVLKFGFLSDIFV 367
            NSQP  AFS FS+MQ+ G+F D FTY  LL+ CSG S    V M+H H+ K G  SDI+V
Sbjct: 95   NSQPYQAFSVFSEMQRIGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYV 154

Query: 368  PNALIDSYSKTSAAGFAEAKKVFDGMPEKDVVSWNSILXXXXXXXXXXXXXQLFEEMPER 547
            PNALID YS+  A G   A K+F  M E+D VSWNS+L             QLF+EMP R
Sbjct: 155  PNALIDCYSRCGAMGVKAAMKLFVKMGERDTVSWNSMLGGLVKAGELRDARQLFDEMPHR 214

Query: 548  DIISWNTLLDGLAKAGEMESVFDLFGRMPERNVVSWSTILSGYCKSGDLEMARALFDKMP 727
            D+ISWNT+LDG A+  +M   F LF +MPERN VSWST++ GY K+GD+EMAR +FDKMP
Sbjct: 215  DLISWNTMLDGYARCRDMTRAFQLFEQMPERNTVSWSTMVMGYSKAGDMEMARIMFDKMP 274

Query: 728  VKNLVTWTIIITGYAEKGQAKEASRLLDQMEEASLEFDVAATVSILAACAESGLLSLGKR 907
             KN+VTWTIII GYAEKG  KEA RL+DQM  A L+FD AA +SILAACAESGLLSLG R
Sbjct: 275  AKNVVTWTIIIAGYAEKGLVKEADRLVDQMVNAGLKFDAAAAISILAACAESGLLSLGMR 334

Query: 908  IHSYVKRSKLRLSTHVSNALIDMYSKCG 991
            +HS +KRS L  + +V NAL+DMY+KCG
Sbjct: 335  VHSTIKRSNLGSNAYVLNALLDMYAKCG 362


>ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230-like
            [Glycine max]
          Length = 604

 Score =  389 bits (1000), Expect = e-106
 Identities = 195/331 (58%), Positives = 241/331 (72%), Gaps = 1/331 (0%)
 Frame = +2

Query: 2    DHLRQIQAQILKADLHRDLFVAPKLISAYSLCRQVLPAVAVFRQVPFPNAHLYNVLIRAF 181
            D + QI AQ+LKA+LH+DLFVAPKLI+A+SLCR +  AV VF  VP PN HLYN +IRA 
Sbjct: 35   DSVNQIHAQVLKANLHQDLFVAPKLIAAFSLCRHLASAVNVFNHVPHPNVHLYNSIIRAH 94

Query: 182  ADNSQP-SLAFSTFSQMQKDGIFPDKFTYSCLLRGCSGTSSFSRVLMIHAHVLKFGFLSD 358
            A NS   SL F+ F QMQK+G+FPD FTY  LL+ CSG SS   V MIHAHV K GF  D
Sbjct: 95   AHNSSHRSLPFNAFFQMQKNGLFPDNFTYPFLLKACSGPSSLPLVRMIHAHVEKIGFYGD 154

Query: 359  IFVPNALIDSYSKTSAAGFAEAKKVFDGMPEKDVVSWNSILXXXXXXXXXXXXXQLFEEM 538
            IFVPN+LIDSYS+   AG   A  +F  M E+DVV+WNS++             +LF+EM
Sbjct: 155  IFVPNSLIDSYSRCGNAGLDGAMSLFLAMEERDVVTWNSMIGGLVRCGELQGACKLFDEM 214

Query: 539  PERDIISWNTLLDGLAKAGEMESVFDLFGRMPERNVVSWSTILSGYCKSGDLEMARALFD 718
            P+RD++SWNT+LDG AKAGEM++ F+LF RMP RN+VSWST++ GY K GD++MAR LFD
Sbjct: 215  PDRDMVSWNTMLDGYAKAGEMDTAFELFERMPWRNIVSWSTMVCGYSKGGDMDMARMLFD 274

Query: 719  KMPVKNLVTWTIIITGYAEKGQAKEASRLLDQMEEASLEFDVAATVSILAACAESGLLSL 898
            + PVKN+V WT II GYAEKG A+EA+ L  +MEEA +  D    +SILAACAESG+L L
Sbjct: 275  RCPVKNVVLWTTIIAGYAEKGLAREATELYGKMEEAGMRPDDGFLLSILAACAESGMLGL 334

Query: 899  GKRIHSYVKRSKLRLSTHVSNALIDMYSKCG 991
            GKRIH+ ++R + R    V NA IDMY+KCG
Sbjct: 335  GKRIHASMRRWRFRCGAKVLNAFIDMYAKCG 365


>ref|XP_006338411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230-like
            [Solanum tuberosum]
          Length = 602

 Score =  389 bits (999), Expect = e-106
 Identities = 196/330 (59%), Positives = 243/330 (73%)
 Frame = +2

Query: 2    DHLRQIQAQILKADLHRDLFVAPKLISAYSLCRQVLPAVAVFRQVPFPNAHLYNVLIRAF 181
            + L+Q+QA + K++L +D F+APKLI+A+S CRQ+   + VF QV  PN HLYN LIRA 
Sbjct: 33   NQLKQMQALVYKSNLEQDPFIAPKLIAAFSNCRQMGSVLKVFDQVRDPNVHLYNALIRAH 92

Query: 182  ADNSQPSLAFSTFSQMQKDGIFPDKFTYSCLLRGCSGTSSFSRVLMIHAHVLKFGFLSDI 361
              NSQPS AF TF  MQ  GIFPD FT+S LL+GCSG    S V MIH HV+K+GF  DI
Sbjct: 93   IYNSQPSQAFDTFFDMQSSGIFPDNFTFSFLLKGCSGKCWLSVVSMIHTHVVKWGFEDDI 152

Query: 362  FVPNALIDSYSKTSAAGFAEAKKVFDGMPEKDVVSWNSILXXXXXXXXXXXXXQLFEEMP 541
            +VPN+LID+YSK    G   A ++F GM E+DVVSWNS++             +LF+EMP
Sbjct: 153  YVPNSLIDAYSKCGLVGVRIAGQLFWGMKERDVVSWNSMISALLKVGDLSEARKLFDEMP 212

Query: 542  ERDIISWNTLLDGLAKAGEMESVFDLFGRMPERNVVSWSTILSGYCKSGDLEMARALFDK 721
            +RD +SWNT+LDG  KA +M   F+LF  MP+R+VVSWST++SGYCK+GDLEMAR LFDK
Sbjct: 213  QRDRVSWNTMLDGYTKAEQMSVAFELFKTMPQRDVVSWSTMVSGYCKAGDLEMARMLFDK 272

Query: 722  MPVKNLVTWTIIITGYAEKGQAKEASRLLDQMEEASLEFDVAATVSILAACAESGLLSLG 901
            MP KNLV+WTI+I+GYAEKG   EA +L  QMEE  L  DVAA VSILAACAESG+LSLG
Sbjct: 273  MPSKNLVSWTIMISGYAEKGLVNEAIQLFMQMEETGLRLDVAAFVSILAACAESGMLSLG 332

Query: 902  KRIHSYVKRSKLRLSTHVSNALIDMYSKCG 991
            K++H  V+RS  + +T V NALIDMY+KCG
Sbjct: 333  KKVHDSVERSTYKCNTLVCNALIDMYAKCG 362


>gb|EOY03563.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
            [Theobroma cacao]
          Length = 672

 Score =  386 bits (991), Expect = e-105
 Identities = 189/329 (57%), Positives = 243/329 (73%)
 Frame = +2

Query: 5    HLRQIQAQILKADLHRDLFVAPKLISAYSLCRQVLPAVAVFRQVPFPNAHLYNVLIRAFA 184
            H++Q+QAQI++ +LH+DL++APKLISA+SLCRQ+  A+ VF Q+  PN HLYN LIRA+ 
Sbjct: 100  HIKQLQAQIIRQNLHQDLYIAPKLISAFSLCRQITLALTVFNQIQDPNVHLYNNLIRAYV 159

Query: 185  DNSQPSLAFSTFSQMQKDGIFPDKFTYSCLLRGCSGTSSFSRVLMIHAHVLKFGFLSDIF 364
             NSQPS AFS F  MQ +GI  D FTY+ LL+ C+       V MIH  + K GFLSDIF
Sbjct: 160  QNSQPSQAFSFFFDMQWNGILADNFTYTFLLKACT---DLKMVEMIHTQIEKNGFLSDIF 216

Query: 365  VPNALIDSYSKTSAAGFAEAKKVFDGMPEKDVVSWNSILXXXXXXXXXXXXXQLFEEMPE 544
            VPNALIDSYSK    G   A K+F  M ++DVVSWNS++             +LF+EMP+
Sbjct: 217  VPNALIDSYSKFGELGIKAALKLFMVMEDRDVVSWNSMIGGLLKVGELREARKLFDEMPQ 276

Query: 545  RDIISWNTLLDGLAKAGEMESVFDLFGRMPERNVVSWSTILSGYCKSGDLEMARALFDKM 724
            RD++SWNT+LDG  KAGEME  F+LF ++P+RNVVSWST++SGY K+GD++MAR LFD+M
Sbjct: 277  RDMVSWNTILDGYVKAGEMEKAFELFQKIPQRNVVSWSTMVSGYSKAGDMDMARVLFDRM 336

Query: 725  PVKNLVTWTIIITGYAEKGQAKEASRLLDQMEEASLEFDVAATVSILAACAESGLLSLGK 904
            PVK LV WTIII+GYAEKG AKEA  L D+ME+  LE D    + ILAACAESGLL++G 
Sbjct: 337  PVKTLVPWTIIISGYAEKGLAKEAIELYDRMEQDGLELDDGTVIGILAACAESGLLAVGV 396

Query: 905  RIHSYVKRSKLRLSTHVSNALIDMYSKCG 991
            ++H+ ++R + R S  V NAL+DMY+KCG
Sbjct: 397  KVHNSIERLRFRCSIAVCNALVDMYAKCG 425


>ref|XP_004232191.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230-like
            [Solanum lycopersicum]
          Length = 602

 Score =  385 bits (988), Expect = e-104
 Identities = 194/330 (58%), Positives = 241/330 (73%)
 Frame = +2

Query: 2    DHLRQIQAQILKADLHRDLFVAPKLISAYSLCRQVLPAVAVFRQVPFPNAHLYNVLIRAF 181
            + L+Q+QA + K++L +D F+APKLI+A+S CRQ+   + +F QV  PN HLYN LIRA 
Sbjct: 33   NQLKQMQALVYKSNLEQDPFIAPKLIAAFSNCRQMGSVLKIFDQVRDPNVHLYNALIRAH 92

Query: 182  ADNSQPSLAFSTFSQMQKDGIFPDKFTYSCLLRGCSGTSSFSRVLMIHAHVLKFGFLSDI 361
              N QPS AF TF  MQ  GIFPD FT+S LL+GCSG    S V MIH HV+K+GF  DI
Sbjct: 93   IYNFQPSQAFDTFFDMQSSGIFPDNFTFSFLLKGCSGKCWLSVVSMIHTHVVKWGFEDDI 152

Query: 362  FVPNALIDSYSKTSAAGFAEAKKVFDGMPEKDVVSWNSILXXXXXXXXXXXXXQLFEEMP 541
            +VPN+LID+YSK    G   A ++F GM E+DVVSWNS++             +LF+EMP
Sbjct: 153  YVPNSLIDAYSKCGLVGVRIAGQLFWGMKERDVVSWNSMISALLKVGDLSEARKLFDEMP 212

Query: 542  ERDIISWNTLLDGLAKAGEMESVFDLFGRMPERNVVSWSTILSGYCKSGDLEMARALFDK 721
            +RD +SWNT+LDG  KA +M   F+LF  MP+R+VVSWST++SGYCK+GDLEMAR LFDK
Sbjct: 213  QRDRVSWNTMLDGYTKAEQMSVAFELFKTMPQRDVVSWSTMVSGYCKAGDLEMARMLFDK 272

Query: 722  MPVKNLVTWTIIITGYAEKGQAKEASRLLDQMEEASLEFDVAATVSILAACAESGLLSLG 901
            MP KNLV+WTI+I+GYAEKG   EA  L  QMEE  L  DVAA VSILAACAESG+LSLG
Sbjct: 273  MPSKNLVSWTIMISGYAEKGLINEAILLFMQMEETGLRLDVAAFVSILAACAESGMLSLG 332

Query: 902  KRIHSYVKRSKLRLSTHVSNALIDMYSKCG 991
            K++H  V+RS  + +T V NALIDMY+KCG
Sbjct: 333  KKVHDSVERSMYKCNTLVCNALIDMYAKCG 362


>ref|NP_189568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75273910|sp|Q9LS72.1|PP261_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At3g29230 gi|9293916|dbj|BAB01819.1| unnamed protein
            product [Arabidopsis thaliana]
            gi|332644032|gb|AEE77553.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 600

 Score =  384 bits (987), Expect = e-104
 Identities = 194/332 (58%), Positives = 239/332 (71%), Gaps = 2/332 (0%)
 Frame = +2

Query: 2    DHLRQIQAQILKADLHRDLFVAPKLISAYSLCRQVLPAVAVFRQVPFPNAHLYNVLIRAF 181
            + ++Q+ AQI++ +LH DL +APKLISA SLCRQ   AV VF QV  PN HL N LIRA 
Sbjct: 33   NQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAH 92

Query: 182  ADNSQPSLAFSTFSQMQKDGIFPDKFTYSCLLRGCSGTSSFSRVLMIHAHVLKFGFLSDI 361
            A NSQP  AF  FS+MQ+ G+F D FTY  LL+ CSG S    V M+H H+ K G  SDI
Sbjct: 93   AQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDI 152

Query: 362  FVPNALIDSYSKTSAAGFAEAKKVFDGMPEKDVVSWNSILXXXXXXXXXXXXXQLFEEMP 541
            +VPNALID YS+    G  +A K+F+ M E+D VSWNS+L             +LF+EMP
Sbjct: 153  YVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMP 212

Query: 542  ERDIISWNTLLDGLAKAGEMESVFDLFGRMPERNVVSWSTILSGYCKSGDLEMARALFDK 721
            +RD+ISWNT+LDG A+  EM   F+LF +MPERN VSWST++ GY K+GD+EMAR +FDK
Sbjct: 213  QRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDK 272

Query: 722  MPV--KNLVTWTIIITGYAEKGQAKEASRLLDQMEEASLEFDVAATVSILAACAESGLLS 895
            MP+  KN+VTWTIII GYAEKG  KEA RL+DQM  + L+FD AA +SILAAC ESGLLS
Sbjct: 273  MPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLS 332

Query: 896  LGKRIHSYVKRSKLRLSTHVSNALIDMYSKCG 991
            LG RIHS +KRS L  + +V NAL+DMY+KCG
Sbjct: 333  LGMRIHSILKRSNLGSNAYVLNALLDMYAKCG 364


>ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
            [Vitis vinifera]
          Length = 594

 Score =  384 bits (987), Expect = e-104
 Identities = 193/330 (58%), Positives = 241/330 (73%)
 Frame = +2

Query: 2    DHLRQIQAQILKADLHRDLFVAPKLISAYSLCRQVLPAVAVFRQVPFPNAHLYNVLIRAF 181
            + ++QI AQ+LKA+LHR+ FV  KLI+A+SLCRQ+  AV VF Q+  P+  LYN LIRA 
Sbjct: 31   NQVKQIHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQDPDVLLYNTLIRAH 90

Query: 182  ADNSQPSLAFSTFSQMQKDGIFPDKFTYSCLLRGCSGTSSFSRVLMIHAHVLKFGFLSDI 361
              NS+P LAFS F +MQ  G+  D FTY  LL+ CSG      V MIHA V K GF  DI
Sbjct: 91   VRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQVEKMGFCLDI 150

Query: 362  FVPNALIDSYSKTSAAGFAEAKKVFDGMPEKDVVSWNSILXXXXXXXXXXXXXQLFEEMP 541
            FVPN+LIDSY K    G A A+KVF+ M E+D VSWNS++             +LF+EMP
Sbjct: 151  FVPNSLIDSYFKCGLDGVAAARKVFEVMAERDTVSWNSMIGGLVKVGELGEARRLFDEMP 210

Query: 542  ERDIISWNTLLDGLAKAGEMESVFDLFGRMPERNVVSWSTILSGYCKSGDLEMARALFDK 721
            ERD +SWNT+LDG  KAGEM + F+LF +MP RNVVSWST++ GY K+GD++MAR LFDK
Sbjct: 211  ERDTVSWNTILDGYVKAGEMNAAFELFEKMPARNVVSWSTMVLGYSKAGDMDMARILFDK 270

Query: 722  MPVKNLVTWTIIITGYAEKGQAKEASRLLDQMEEASLEFDVAATVSILAACAESGLLSLG 901
            MPVKNLV WTI+I+GYAEKG AK+A  L +QMEEA L+FD    +SIL+ACA SGLL LG
Sbjct: 271  MPVKNLVPWTIMISGYAEKGLAKDAINLYNQMEEAGLKFDDGTVISILSACAVSGLLGLG 330

Query: 902  KRIHSYVKRSKLRLSTHVSNALIDMYSKCG 991
            KR+H+ ++R++ + ST VSNALIDMY+KCG
Sbjct: 331  KRVHASIERTRFKCSTPVSNALIDMYAKCG 360


>ref|XP_002875497.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297321335|gb|EFH51756.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 629

 Score =  379 bits (972), Expect = e-102
 Identities = 191/332 (57%), Positives = 237/332 (71%), Gaps = 2/332 (0%)
 Frame = +2

Query: 2    DHLRQIQAQILKADLHRDLFVAPKLISAYSLCRQVLPAVAVFRQVPFPNAHLYNVLIRAF 181
            + ++Q+ AQI++ +LH+DL +APKLISA SLCRQ   A+ VF QV  PN HL N LIRA 
Sbjct: 33   NQVKQLHAQIIRRNLHQDLHIAPKLISALSLCRQTNLALRVFNQVQEPNVHLCNSLIRAH 92

Query: 182  ADNSQPSLAFSTFSQMQKDGIFPDKFTYSCLLRGCSGTSSFSRVLMIHAHVLKFGFLSDI 361
            A NSQP  AF  FS+MQ+ G+F D FTY  LL+ CSG S    V M+H H+ K G  SDI
Sbjct: 93   ALNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGLSWLPVVKMMHNHIEKLGLSSDI 152

Query: 362  FVPNALIDSYSKTSAAGFAEAKKVFDGMPEKDVVSWNSILXXXXXXXXXXXXXQLFEEMP 541
            +VPNALID YS+    G  +A K+F+ M E+D VSWNS+L             +LF+EMP
Sbjct: 153  YVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARKLFDEMP 212

Query: 542  ERDIISWNTLLDGLAKAGEMESVFDLFGRMPERNVVSWSTILSGYCKSGDLEMARALFDK 721
            +RD+ISWNT+LDG A+  EM   F+LF +MPERN VSWST++ GY K+GD+EMAR +FDK
Sbjct: 213  QRDLISWNTMLDGYARCREMSRAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDK 272

Query: 722  M--PVKNLVTWTIIITGYAEKGQAKEASRLLDQMEEASLEFDVAATVSILAACAESGLLS 895
            M  P KN+VTWTIII GYAEKG  KEA +L+DQM  + L FD AA +SILAACAESGLLS
Sbjct: 273  MPFPAKNVVTWTIIIAGYAEKGLLKEADKLVDQMVASGLRFDAAAAISILAACAESGLLS 332

Query: 896  LGKRIHSYVKRSKLRLSTHVSNALIDMYSKCG 991
            LG R HS +K+S L  +  V NAL+DMY+KCG
Sbjct: 333  LGMRAHSIIKKSNLNSNASVLNALLDMYAKCG 364


>ref|XP_006290777.1| hypothetical protein CARUB_v10016882mg [Capsella rubella]
            gi|482559484|gb|EOA23675.1| hypothetical protein
            CARUB_v10016882mg [Capsella rubella]
          Length = 601

 Score =  378 bits (971), Expect = e-102
 Identities = 191/330 (57%), Positives = 236/330 (71%), Gaps = 2/330 (0%)
 Frame = +2

Query: 8    LRQIQAQILKADLHRDLFVAPKLISAYSLCRQVLPAVAVFRQVPFPNAHLYNVLIRAFAD 187
            ++Q+ AQI++ +LH+DL +APKLISA SLCRQ   A+ VF QV  PN HL N LIRA A 
Sbjct: 36   VKQLHAQIIRRNLHQDLHIAPKLISALSLCRQTNLALRVFNQVQEPNVHLCNSLIRAHAL 95

Query: 188  NSQPSLAFSTFSQMQKDGIFPDKFTYSCLLRGCSGTSSFSRVLMIHAHVLKFGFLSDIFV 367
            NSQP  AF  FS+MQ+ G+F D FTY  LL+ CSG S    V MIH H+ K G  SDI+V
Sbjct: 96   NSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMIHNHIEKLGLSSDIYV 155

Query: 368  PNALIDSYSKTSAAGFAEAKKVFDGMPEKDVVSWNSILXXXXXXXXXXXXXQLFEEMPER 547
            PNALID Y +    G  EA K+F+ M E+D VSWNS+L             QLF+EMP+R
Sbjct: 156  PNALIDCYCRCGGLGVREAMKLFEKMGERDTVSWNSMLGGLVKAGELRDARQLFDEMPQR 215

Query: 548  DIISWNTLLDGLAKAGEMESVFDLFGRMPERNVVSWSTILSGYCKSGDLEMARALFDKMP 727
            D+ISWNT+LDG A+  EM   F+LF +MPER+ VSWST++ GY K+GD+EMA+ +FDKMP
Sbjct: 216  DLISWNTMLDGYARCREMSKAFELFEKMPERSTVSWSTMVMGYSKAGDMEMAKIMFDKMP 275

Query: 728  V--KNLVTWTIIITGYAEKGQAKEASRLLDQMEEASLEFDVAATVSILAACAESGLLSLG 901
            +  KN+VTWTIII GYAEKG  KEA RL+DQM  + L FD AA +SILAACAESGLL LG
Sbjct: 276  LPAKNVVTWTIIIAGYAEKGLMKEADRLVDQMVASGLRFDAAAAISILAACAESGLLGLG 335

Query: 902  KRIHSYVKRSKLRLSTHVSNALIDMYSKCG 991
             R+HS +KR+ L  +  V NAL+DMY+KCG
Sbjct: 336  MRVHSIIKRTNLNSNASVLNALLDMYAKCG 365


>ref|XP_006482717.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230-like
            [Citrus sinensis]
          Length = 614

 Score =  370 bits (951), Expect = e-100
 Identities = 182/327 (55%), Positives = 234/327 (71%)
 Frame = +2

Query: 11   RQIQAQILKADLHRDLFVAPKLISAYSLCRQVLPAVAVFRQVPFPNAHLYNVLIRAFADN 190
            +Q+ AQI+K DL RD  +APKLIS+ +LCRQ+  A+ VF  +  PN HLYN LIRA   N
Sbjct: 43   KQLFAQIIKLDLQRDPHIAPKLISSLALCRQMGLAIKVFNDIQDPNIHLYNSLIRACVQN 102

Query: 191  SQPSLAFSTFSQMQKDGIFPDKFTYSCLLRGCSGTSSFSRVLMIHAHVLKFGFLSDIFVP 370
            S  + AF  F  MQ+ G+F D FTY  LL+ C+G + F  V MIHA + K G+  DIFVP
Sbjct: 103  SLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHALIYKCGYFGDIFVP 162

Query: 371  NALIDSYSKTSAAGFAEAKKVFDGMPEKDVVSWNSILXXXXXXXXXXXXXQLFEEMPERD 550
            N+LIDSYSK  A G + AKK+F  M E+D+VSWNS++             +LF+EMPERD
Sbjct: 163  NSLIDSYSKCGAVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGEELSEARRLFDEMPERD 222

Query: 551  IISWNTLLDGLAKAGEMESVFDLFGRMPERNVVSWSTILSGYCKSGDLEMARALFDKMPV 730
             +SWNT+LDG AKAGEM   F+LF ++P RN+VSWST++ GY K  D+EMA+ LFD+MP 
Sbjct: 223  AVSWNTILDGYAKAGEMNLAFELFEKIPHRNIVSWSTMIWGYSKDADMEMAKLLFDRMPA 282

Query: 731  KNLVTWTIIITGYAEKGQAKEASRLLDQMEEASLEFDVAATVSILAACAESGLLSLGKRI 910
            K LV WTIII+GYAEKG AKEA+RL DQMEEA L+ D    +SILAACAESGLL LG ++
Sbjct: 283  KTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILAACAESGLLGLGMKV 342

Query: 911  HSYVKRSKLRLSTHVSNALIDMYSKCG 991
            H+ + + + + +T+V NAL+DMY+KCG
Sbjct: 343  HASINKYRFKCNTNVCNALVDMYAKCG 369


>ref|XP_006431260.1| hypothetical protein CICLE_v10011308mg [Citrus clementina]
            gi|557533317|gb|ESR44500.1| hypothetical protein
            CICLE_v10011308mg [Citrus clementina]
          Length = 614

 Score =  370 bits (950), Expect = e-100
 Identities = 180/327 (55%), Positives = 234/327 (71%)
 Frame = +2

Query: 11   RQIQAQILKADLHRDLFVAPKLISAYSLCRQVLPAVAVFRQVPFPNAHLYNVLIRAFADN 190
            +Q+ AQI+K DL RD ++APKLIS+ +LCRQ+  A+ VF  +  P+ HLYN LIRA   N
Sbjct: 43   KQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQDPDVHLYNTLIRACVQN 102

Query: 191  SQPSLAFSTFSQMQKDGIFPDKFTYSCLLRGCSGTSSFSRVLMIHAHVLKFGFLSDIFVP 370
            S  + AF  F  MQ+ G+F D FTY  LL+ C+G + F  V MIHA + K G+  DIFVP
Sbjct: 103  SLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHALIYKCGYFGDIFVP 162

Query: 371  NALIDSYSKTSAAGFAEAKKVFDGMPEKDVVSWNSILXXXXXXXXXXXXXQLFEEMPERD 550
            N+LIDSYSK    G + AKK+F  M E+D+VSWNS++             +LF+EMPERD
Sbjct: 163  NSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELSEARRLFDEMPERD 222

Query: 551  IISWNTLLDGLAKAGEMESVFDLFGRMPERNVVSWSTILSGYCKSGDLEMARALFDKMPV 730
             +SWNT+LDG AKAGEM   F+LF ++P RN+VSWST++ GY K GD+EMA+ LFD+MP 
Sbjct: 223  AVSWNTILDGYAKAGEMNLAFELFEKIPHRNIVSWSTMVWGYSKDGDMEMAKLLFDRMPA 282

Query: 731  KNLVTWTIIITGYAEKGQAKEASRLLDQMEEASLEFDVAATVSILAACAESGLLSLGKRI 910
            K LV WTIII+GYAEKG AKEA+RL DQMEEA L+ D    +SILAAC ESGLL LG ++
Sbjct: 283  KTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILAACTESGLLGLGMKV 342

Query: 911  HSYVKRSKLRLSTHVSNALIDMYSKCG 991
            H+ + + + + +T+V NAL+DMY+KCG
Sbjct: 343  HASINKYRFKCNTNVCNALVDMYAKCG 369


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