BLASTX nr result
ID: Zingiber23_contig00037931
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00037931
(756 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g... 446 e-123
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s... 441 e-121
tpg|DAA37181.1| TPA: putative DNA-directed RNA polymerase family... 441 e-121
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S... 439 e-121
ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III s... 436 e-120
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s... 433 e-119
ref|XP_002974416.1| hypothetical protein SELMODRAFT_442419 [Sela... 430 e-118
ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Sela... 430 e-118
ref|XP_003570766.1| PREDICTED: DNA-directed RNA polymerase III s... 427 e-117
emb|CBI16226.3| unnamed protein product [Vitis vinifera] 425 e-117
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 425 e-117
ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi... 416 e-114
ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [A... 415 e-114
ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s... 414 e-113
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s... 414 e-113
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s... 414 e-113
gb|EMJ09344.1| hypothetical protein PRUPE_ppa024521mg, partial [... 414 e-113
ref|XP_004169848.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 413 e-113
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s... 413 e-113
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s... 413 e-113
>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
Japonica Group] gi|38347455|emb|CAD41360.2|
OSJNBa0076N16.24 [Oryza sativa Japonica Group]
gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
Japonica Group] gi|116310339|emb|CAH67354.1|
OSIGBa0130B08.14 [Oryza sativa Indica Group]
gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218195112|gb|EEC77539.1| hypothetical protein
OsI_16437 [Oryza sativa Indica Group]
Length = 1383
Score = 446 bits (1146), Expect = e-123
Identities = 209/251 (83%), Positives = 237/251 (94%)
Frame = +3
Query: 3 SIPDSKHRGLVQRLKGKQGRFRGNLSGKRTEFTGRTVISPDPNLKITEVAIPMLMAKKLT 182
S+P+S+HRGLVQRLKGK GRFRGNLSGKRTE+TGRTVISPDPNL+ITEVAIP+LMA+ LT
Sbjct: 321 SLPESQHRGLVQRLKGKTGRFRGNLSGKRTEYTGRTVISPDPNLRITEVAIPILMARVLT 380
Query: 183 FPERVSAHNIEKLRQRIGNGPDKYPGANFILLPDGTRQHLRYVDKKTAASELKYGFIVER 362
+PERVS +NIEKLRQ I NGP K+PGANFI+ PDGT+ HL+Y D++ AA +LKYG +VER
Sbjct: 381 YPERVSYYNIEKLRQCIRNGPHKHPGANFIIQPDGTKLHLKYCDRRIAARDLKYGCVVER 440
Query: 363 HLEDGDVILFNRQPSLHRMSIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQT 542
HLEDGD++LFNRQPSLHRMSIM HRAR+MPWRTLRFNESVCNPYNADFDGDEMNLHVPQT
Sbjct: 441 HLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQT 500
Query: 543 EEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRATFSLMCSYIG 722
EEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSS+L+TRKD FYDR++FSL+CSY+G
Sbjct: 501 EEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLVTRKDNFYDRSSFSLLCSYLG 560
Query: 723 DAMESVDLPTP 755
DAME++DLPTP
Sbjct: 561 DAMENIDLPTP 571
>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
brachyantha]
Length = 1389
Score = 441 bits (1135), Expect = e-121
Identities = 207/251 (82%), Positives = 236/251 (94%)
Frame = +3
Query: 3 SIPDSKHRGLVQRLKGKQGRFRGNLSGKRTEFTGRTVISPDPNLKITEVAIPMLMAKKLT 182
S+P+S+HRGLVQRLKGK GRFRGNLSGKRTE+TGRTVISPDPNL+ITEVAIP+LMA+ LT
Sbjct: 321 SLPESQHRGLVQRLKGKTGRFRGNLSGKRTEYTGRTVISPDPNLRITEVAIPILMARVLT 380
Query: 183 FPERVSAHNIEKLRQRIGNGPDKYPGANFILLPDGTRQHLRYVDKKTAASELKYGFIVER 362
+PERVS +NIEKLRQ I NGP K+PGANFI+ DGT+ HL+Y D++ AA +LKYG +VER
Sbjct: 381 YPERVSYYNIEKLRQCIRNGPHKHPGANFIIQTDGTKLHLKYCDRRIAARDLKYGCVVER 440
Query: 363 HLEDGDVILFNRQPSLHRMSIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQT 542
HLEDGD++LFNRQPSLHRMSIM HRAR+MPWRTLRFNESVCNPYNADFDGDEMNLHVPQT
Sbjct: 441 HLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQT 500
Query: 543 EEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRATFSLMCSYIG 722
EEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSS+L+TRKD FYDR++F+L+CSY+G
Sbjct: 501 EEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLVTRKDNFYDRSSFTLLCSYLG 560
Query: 723 DAMESVDLPTP 755
DAME++DLPTP
Sbjct: 561 DAMENIDLPTP 571
>tpg|DAA37181.1| TPA: putative DNA-directed RNA polymerase family protein [Zea mays]
Length = 1030
Score = 441 bits (1135), Expect = e-121
Identities = 209/251 (83%), Positives = 234/251 (93%)
Frame = +3
Query: 3 SIPDSKHRGLVQRLKGKQGRFRGNLSGKRTEFTGRTVISPDPNLKITEVAIPMLMAKKLT 182
S+P+S+HRGLVQRLKGK GRFRGNLSGKRTE+TGRTVISPDPNLKITEVAIP+LMA+ LT
Sbjct: 321 SLPESQHRGLVQRLKGKTGRFRGNLSGKRTEYTGRTVISPDPNLKITEVAIPVLMARVLT 380
Query: 183 FPERVSAHNIEKLRQRIGNGPDKYPGANFILLPDGTRQHLRYVDKKTAASELKYGFIVER 362
+PERVS +NIEKLRQ I NGP KYPGANF+ PDG +Q L+Y D++ A +LK G IVER
Sbjct: 381 YPERVSNYNIEKLRQCIRNGPFKYPGANFVTQPDGMKQSLKYGDRRITARDLKCGCIVER 440
Query: 363 HLEDGDVILFNRQPSLHRMSIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQT 542
HLEDGDV+LFNRQPSLHRMSIMCHRAR+MPWRTLRFNESVCNPYNADFDGDEMNLHVPQT
Sbjct: 441 HLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQT 500
Query: 543 EEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRATFSLMCSYIG 722
EEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSS+L+TRKDTFYDR++F+L+CSY+G
Sbjct: 501 EEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLVTRKDTFYDRSSFTLLCSYLG 560
Query: 723 DAMESVDLPTP 755
D ME++DLPTP
Sbjct: 561 DGMENIDLPTP 571
>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
gi|241937900|gb|EES11045.1| hypothetical protein
SORBIDRAFT_06g021120 [Sorghum bicolor]
Length = 1391
Score = 439 bits (1129), Expect = e-121
Identities = 209/250 (83%), Positives = 233/250 (93%)
Frame = +3
Query: 6 IPDSKHRGLVQRLKGKQGRFRGNLSGKRTEFTGRTVISPDPNLKITEVAIPMLMAKKLTF 185
+PDS+HRGLVQRLKGK GRFRGNLSGKRTE+TGRTVISPDPNLKITEVAIP+LMA+ LT+
Sbjct: 322 LPDSQHRGLVQRLKGKTGRFRGNLSGKRTEYTGRTVISPDPNLKITEVAIPVLMARVLTY 381
Query: 186 PERVSAHNIEKLRQRIGNGPDKYPGANFILLPDGTRQHLRYVDKKTAASELKYGFIVERH 365
PERVS +NIEKLRQ I NGP KYPGANF+ PDG +Q L+Y D++ A +LK G IVERH
Sbjct: 382 PERVSNYNIEKLRQCIRNGPFKYPGANFVTQPDGMKQSLKYGDRRITARDLKCGCIVERH 441
Query: 366 LEDGDVILFNRQPSLHRMSIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTE 545
LEDGDV+LFNRQPSLHRMSIM HRAR+MPWRTLRFNESVCNPYNADFDGDEMNLHVPQTE
Sbjct: 442 LEDGDVVLFNRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTE 501
Query: 546 EARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRATFSLMCSYIGD 725
EARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSS+L+TRKDTFYDR++F+L+CSY+GD
Sbjct: 502 EARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLVTRKDTFYDRSSFTLLCSYLGD 561
Query: 726 AMESVDLPTP 755
AME++DLPTP
Sbjct: 562 AMENIDLPTP 571
>ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Brachypodium distachyon]
Length = 1392
Score = 436 bits (1122), Expect = e-120
Identities = 207/251 (82%), Positives = 233/251 (92%)
Frame = +3
Query: 3 SIPDSKHRGLVQRLKGKQGRFRGNLSGKRTEFTGRTVISPDPNLKITEVAIPMLMAKKLT 182
S+ D ++RGLVQRLKGK GRFRGNLSGKRTE+TGRTVISPDPNL+ITEVAIP+LMA+ LT
Sbjct: 321 SLTDPQNRGLVQRLKGKTGRFRGNLSGKRTEYTGRTVISPDPNLRITEVAIPVLMARVLT 380
Query: 183 FPERVSAHNIEKLRQRIGNGPDKYPGANFILLPDGTRQHLRYVDKKTAASELKYGFIVER 362
+PERVS +NIEKLRQ I NGP K+PGANF+ PDGT+ HL+Y D++ AA +LKYG IVER
Sbjct: 381 YPERVSYYNIEKLRQCIRNGPHKHPGANFVTQPDGTKLHLKYCDRRIAARDLKYGCIVER 440
Query: 363 HLEDGDVILFNRQPSLHRMSIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQT 542
HLEDGD++LFNRQPSLHRMSIM HRAR+MPWRTLRFNESVCNPYNADFDGDEMNLHVPQT
Sbjct: 441 HLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQT 500
Query: 543 EEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRATFSLMCSYIG 722
EEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSS+LITRKD FYDR+ F+L+CSY+G
Sbjct: 501 EEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDNFYDRSYFTLLCSYLG 560
Query: 723 DAMESVDLPTP 755
DAME++DLPTP
Sbjct: 561 DAMENIDLPTP 571
>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Setaria
italica]
Length = 1397
Score = 433 bits (1113), Expect = e-119
Identities = 204/250 (81%), Positives = 233/250 (93%)
Frame = +3
Query: 6 IPDSKHRGLVQRLKGKQGRFRGNLSGKRTEFTGRTVISPDPNLKITEVAIPMLMAKKLTF 185
+P+S+HRGLVQRLKGK GRFRGNLSGKRTE+TGRTVISPDPNL+ITEVAIP+LMA+ LT+
Sbjct: 325 LPESQHRGLVQRLKGKTGRFRGNLSGKRTEYTGRTVISPDPNLRITEVAIPVLMARVLTY 384
Query: 186 PERVSAHNIEKLRQRIGNGPDKYPGANFILLPDGTRQHLRYVDKKTAASELKYGFIVERH 365
PERVS +N+EKLRQ I NGP K+PGANFI+ PDGT+ L+Y D++ A +LK G+ VERH
Sbjct: 385 PERVSNYNLEKLRQCIRNGPYKHPGANFIITPDGTKLSLKYGDRRIHARDLKCGYTVERH 444
Query: 366 LEDGDVILFNRQPSLHRMSIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTE 545
LEDGDV+LFNRQPSLHRMSIM HRAR+MPWRTLRFNESVCNPYNADFDGDEMNLHVPQTE
Sbjct: 445 LEDGDVVLFNRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTE 504
Query: 546 EARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRATFSLMCSYIGD 725
EARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSS+L+TRKD FYDR++F+L+CSY+GD
Sbjct: 505 EARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLVTRKDAFYDRSSFALLCSYVGD 564
Query: 726 AMESVDLPTP 755
AME++DLPTP
Sbjct: 565 AMENIDLPTP 574
>ref|XP_002974416.1| hypothetical protein SELMODRAFT_442419 [Selaginella moellendorffii]
gi|300158014|gb|EFJ24638.1| hypothetical protein
SELMODRAFT_442419 [Selaginella moellendorffii]
Length = 1348
Score = 430 bits (1105), Expect = e-118
Identities = 200/244 (81%), Positives = 228/244 (93%)
Frame = +3
Query: 24 RGLVQRLKGKQGRFRGNLSGKRTEFTGRTVISPDPNLKITEVAIPMLMAKKLTFPERVSA 203
RG VQRLKGKQGRFRGNLSGKR +FTGRTVISPDPNLK++EVA+P+LMA+ LT+PE+VSA
Sbjct: 352 RGFVQRLKGKQGRFRGNLSGKRVDFTGRTVISPDPNLKVSEVAVPILMAQTLTYPEKVSA 411
Query: 204 HNIEKLRQRIGNGPDKYPGANFILLPDGTRQHLRYVDKKTAASELKYGFIVERHLEDGDV 383
HNIEKLRQR+ NG +K+PGANF++ PDG ++ L++ D+K ASELKYG +VERHLEDGD+
Sbjct: 412 HNIEKLRQRVINGKEKHPGANFVVFPDGVKRFLKFGDRKRIASELKYGDVVERHLEDGDI 471
Query: 384 ILFNRQPSLHRMSIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEA 563
+LFNRQPSLHRMSIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA
Sbjct: 472 VLFNRQPSLHRMSIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA 531
Query: 564 LMLMGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRATFSLMCSYIGDAMESVD 743
L LMGVQNNLCTPKNGEILVASTQDFLTSS+LITR+DTFYDR F+LMCSY+GDA+E +D
Sbjct: 532 LTLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRRDTFYDRGQFALMCSYMGDAVEHID 591
Query: 744 LPTP 755
LPTP
Sbjct: 592 LPTP 595
>ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Selaginella moellendorffii]
gi|300146624|gb|EFJ13293.1| hypothetical protein
SELMODRAFT_446351 [Selaginella moellendorffii]
Length = 1393
Score = 430 bits (1105), Expect = e-118
Identities = 200/244 (81%), Positives = 228/244 (93%)
Frame = +3
Query: 24 RGLVQRLKGKQGRFRGNLSGKRTEFTGRTVISPDPNLKITEVAIPMLMAKKLTFPERVSA 203
RG VQRLKGKQGRFRGNLSGKR +FTGRTVISPDPNLK++EVA+P+LMA+ LT+PE+VSA
Sbjct: 352 RGFVQRLKGKQGRFRGNLSGKRVDFTGRTVISPDPNLKVSEVAVPILMAQTLTYPEKVSA 411
Query: 204 HNIEKLRQRIGNGPDKYPGANFILLPDGTRQHLRYVDKKTAASELKYGFIVERHLEDGDV 383
HNIEKLRQR+ NG +K+PGANF++ PDG ++ L++ D+K ASELKYG +VERHLEDGD+
Sbjct: 412 HNIEKLRQRVINGKEKHPGANFVVFPDGVKRFLKFGDRKRIASELKYGDVVERHLEDGDI 471
Query: 384 ILFNRQPSLHRMSIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEA 563
+LFNRQPSLHRMSIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA
Sbjct: 472 VLFNRQPSLHRMSIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA 531
Query: 564 LMLMGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRATFSLMCSYIGDAMESVD 743
L LMGVQNNLCTPKNGEILVASTQDFLTSS+LITR+DTFYDR F+LMCSY+GDA+E +D
Sbjct: 532 LTLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRRDTFYDRGQFALMCSYMGDAVEHID 591
Query: 744 LPTP 755
LPTP
Sbjct: 592 LPTP 595
>ref|XP_003570766.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Brachypodium distachyon]
Length = 1400
Score = 427 bits (1097), Expect = e-117
Identities = 203/251 (80%), Positives = 229/251 (91%)
Frame = +3
Query: 3 SIPDSKHRGLVQRLKGKQGRFRGNLSGKRTEFTGRTVISPDPNLKITEVAIPMLMAKKLT 182
S+ DSK GL+QRLKGK GRFRGNLSGKRTE TGRTVISPDPNL+ITEVAIP+LMA+ LT
Sbjct: 326 SLQDSKDCGLIQRLKGKTGRFRGNLSGKRTEHTGRTVISPDPNLRITEVAIPVLMARVLT 385
Query: 183 FPERVSAHNIEKLRQRIGNGPDKYPGANFILLPDGTRQHLRYVDKKTAASELKYGFIVER 362
+PERV+ +NIEKLRQ I NGP K+PGANFI+ PD T+ HL Y D+ AA +LKYG IVER
Sbjct: 386 YPERVTYYNIEKLRQCIRNGPHKHPGANFIIQPDETKLHLNYCDRSRAARDLKYGCIVER 445
Query: 363 HLEDGDVILFNRQPSLHRMSIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQT 542
HLEDGD++LFNRQPSLHRMSIM HRAR+MPWRTLRFNESVCNPYNADFDGDEMNLHVPQT
Sbjct: 446 HLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQT 505
Query: 543 EEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRATFSLMCSYIG 722
EEARTEA +LMGVQ+NLCTPKNGEILVASTQDFLTSS+L+TRKDTFYDR+ F+L+CSY+G
Sbjct: 506 EEARTEAFLLMGVQSNLCTPKNGEILVASTQDFLTSSFLVTRKDTFYDRSYFTLLCSYLG 565
Query: 723 DAMESVDLPTP 755
DAME++DLPTP
Sbjct: 566 DAMENIDLPTP 576
>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
Length = 1819
Score = 425 bits (1092), Expect = e-117
Identities = 206/243 (84%), Positives = 221/243 (90%)
Frame = +3
Query: 27 GLVQRLKGKQGRFRGNLSGKRTEFTGRTVISPDPNLKITEVAIPMLMAKKLTFPERVSAH 206
G VQRLKGKQGRFRGNLSGKR E+TGRTVISPDPNLKITEVAIP+LMAK L++PERVS H
Sbjct: 339 GFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAKILSYPERVSHH 398
Query: 207 NIEKLRQRIGNGPDKYPGANFILLPDGTRQHLRYVDKKTAASELKYGFIVERHLEDGDVI 386
NIEKLRQ I NGP KYPGA I PDG+ + L + +K A ELKYG+IVERHLEDGDV+
Sbjct: 399 NIEKLRQCILNGPFKYPGAKLIRYPDGSMRSLMFSGRKRFADELKYGYIVERHLEDGDVV 458
Query: 387 LFNRQPSLHRMSIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAL 566
LFNRQPSLHRMSIMCHRAR+MPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEAL
Sbjct: 459 LFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL 518
Query: 567 MLMGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRATFSLMCSYIGDAMESVDL 746
MLMGVQNNLCTPKNGEILVASTQDFLTSS+LITRKDTFYDRA FSLMCSY+GD M+ VDL
Sbjct: 519 MLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDL 578
Query: 747 PTP 755
PTP
Sbjct: 579 PTP 581
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
vinifera]
Length = 1383
Score = 425 bits (1092), Expect = e-117
Identities = 206/243 (84%), Positives = 221/243 (90%)
Frame = +3
Query: 27 GLVQRLKGKQGRFRGNLSGKRTEFTGRTVISPDPNLKITEVAIPMLMAKKLTFPERVSAH 206
G VQRLKGKQGRFRGNLSGKR E+TGRTVISPDPNLKITEVAIP+LMAK L++PERVS H
Sbjct: 339 GFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAKILSYPERVSHH 398
Query: 207 NIEKLRQRIGNGPDKYPGANFILLPDGTRQHLRYVDKKTAASELKYGFIVERHLEDGDVI 386
NIEKLRQ I NGP KYPGA I PDG+ + L + +K A ELKYG+IVERHLEDGDV+
Sbjct: 399 NIEKLRQCILNGPFKYPGAKLIRYPDGSMRSLMFSGRKRFADELKYGYIVERHLEDGDVV 458
Query: 387 LFNRQPSLHRMSIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAL 566
LFNRQPSLHRMSIMCHRAR+MPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEAL
Sbjct: 459 LFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL 518
Query: 567 MLMGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRATFSLMCSYIGDAMESVDL 746
MLMGVQNNLCTPKNGEILVASTQDFLTSS+LITRKDTFYDRA FSLMCSY+GD M+ VDL
Sbjct: 519 MLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDL 578
Query: 747 PTP 755
PTP
Sbjct: 579 PTP 581
>ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi|162691719|gb|EDQ78080.1|
predicted protein [Physcomitrella patens]
Length = 1397
Score = 416 bits (1068), Expect = e-114
Identities = 198/244 (81%), Positives = 222/244 (90%)
Frame = +3
Query: 24 RGLVQRLKGKQGRFRGNLSGKRTEFTGRTVISPDPNLKITEVAIPMLMAKKLTFPERVSA 203
RG VQRLKGKQGRFRGNLSGKR +FTGRTVISPDPNLKITEVA+P+LMA+ LT+PE+VS
Sbjct: 347 RGFVQRLKGKQGRFRGNLSGKRVDFTGRTVISPDPNLKITEVAVPLLMAQLLTYPEKVSR 406
Query: 204 HNIEKLRQRIGNGPDKYPGANFILLPDGTRQHLRYVDKKTAASELKYGFIVERHLEDGDV 383
+NI+KLR RI NG K+PGANFI+ PDG + +L++ D++ A+ELKYG IVERHLEDGD+
Sbjct: 407 YNIDKLRGRIINGMTKHPGANFIIFPDGNKLYLKFGDRRRYAAELKYGDIVERHLEDGDI 466
Query: 384 ILFNRQPSLHRMSIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEA 563
+LFNRQPSLHRMSIM HRAR+MPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEA
Sbjct: 467 VLFNRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEA 526
Query: 564 LMLMGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRATFSLMCSYIGDAMESVD 743
LMLMGV NNLCTPKNGEILVASTQDFLTSSYL TRKDTFYDRATF+ C Y+GDA E++D
Sbjct: 527 LMLMGVANNLCTPKNGEILVASTQDFLTSSYLFTRKDTFYDRATFTQACVYMGDAAENID 586
Query: 744 LPTP 755
LPTP
Sbjct: 587 LPTP 590
>ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [Amborella trichopoda]
gi|548832896|gb|ERM95665.1| hypothetical protein
AMTR_s00023p00196820 [Amborella trichopoda]
Length = 1383
Score = 415 bits (1067), Expect = e-114
Identities = 203/249 (81%), Positives = 220/249 (88%)
Frame = +3
Query: 9 PDSKHRGLVQRLKGKQGRFRGNLSGKRTEFTGRTVISPDPNLKITEVAIPMLMAKKLTFP 188
P GLVQRLKGKQGRFR NL GKR +FTGRTVISPDPNLKITEVAIP LMA+ LT+
Sbjct: 330 PSKFEGGLVQRLKGKQGRFRSNLEGKRVDFTGRTVISPDPNLKITEVAIPRLMAQILTYK 389
Query: 189 ERVSAHNIEKLRQRIGNGPDKYPGANFILLPDGTRQHLRYVDKKTAASELKYGFIVERHL 368
ERV+ HNIEKLRQ + NGP KYPGANF++ G LRY +KK A ELK+G VERHL
Sbjct: 390 ERVTIHNIEKLRQCVRNGPVKYPGANFVI-SGGDTLSLRYGNKKRKADELKFGDFVERHL 448
Query: 369 EDGDVILFNRQPSLHRMSIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEE 548
EDG+++LFNRQPSLHRMSIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEE
Sbjct: 449 EDGEIVLFNRQPSLHRMSIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMNIHVPQTEE 508
Query: 549 ARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRATFSLMCSYIGDA 728
ARTEALMLMGVQ+NLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRATFSLMCSY+GD
Sbjct: 509 ARTEALMLMGVQHNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRATFSLMCSYMGDG 568
Query: 729 MESVDLPTP 755
ME++DLPTP
Sbjct: 569 MENIDLPTP 577
>ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X2 [Solanum tuberosum]
Length = 1243
Score = 414 bits (1064), Expect = e-113
Identities = 197/243 (81%), Positives = 221/243 (90%)
Frame = +3
Query: 27 GLVQRLKGKQGRFRGNLSGKRTEFTGRTVISPDPNLKITEVAIPMLMAKKLTFPERVSAH 206
G QRLKGKQGRFRGNLSGKR E+TGRTVISPDPNLKITEVAIP+LMA+ LT+PERVS H
Sbjct: 336 GFTQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSQH 395
Query: 207 NIEKLRQRIGNGPDKYPGANFILLPDGTRQHLRYVDKKTAASELKYGFIVERHLEDGDVI 386
NIEKLRQ + NGP+KYPGA FI PDG+ L + +K A ELK+G+IV+RHLEDGD++
Sbjct: 396 NIEKLRQCVRNGPNKYPGAKFIRHPDGSEISLMFTSRKRHADELKFGYIVDRHLEDGDIV 455
Query: 387 LFNRQPSLHRMSIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAL 566
LFNRQPSLHRMSIM HRAR+MPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEAL
Sbjct: 456 LFNRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL 515
Query: 567 MLMGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRATFSLMCSYIGDAMESVDL 746
MLMGVQNNLCTPK+GEILVASTQDFLTSS+LITRKDTFY+RA+FSL+CSY+GDAM+ DL
Sbjct: 516 MLMGVQNNLCTPKSGEILVASTQDFLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDL 575
Query: 747 PTP 755
P+P
Sbjct: 576 PSP 578
>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Solanum tuberosum]
Length = 1394
Score = 414 bits (1064), Expect = e-113
Identities = 197/243 (81%), Positives = 221/243 (90%)
Frame = +3
Query: 27 GLVQRLKGKQGRFRGNLSGKRTEFTGRTVISPDPNLKITEVAIPMLMAKKLTFPERVSAH 206
G QRLKGKQGRFRGNLSGKR E+TGRTVISPDPNLKITEVAIP+LMA+ LT+PERVS H
Sbjct: 336 GFTQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSQH 395
Query: 207 NIEKLRQRIGNGPDKYPGANFILLPDGTRQHLRYVDKKTAASELKYGFIVERHLEDGDVI 386
NIEKLRQ + NGP+KYPGA FI PDG+ L + +K A ELK+G+IV+RHLEDGD++
Sbjct: 396 NIEKLRQCVRNGPNKYPGAKFIRHPDGSEISLMFTSRKRHADELKFGYIVDRHLEDGDIV 455
Query: 387 LFNRQPSLHRMSIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAL 566
LFNRQPSLHRMSIM HRAR+MPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEAL
Sbjct: 456 LFNRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL 515
Query: 567 MLMGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRATFSLMCSYIGDAMESVDL 746
MLMGVQNNLCTPK+GEILVASTQDFLTSS+LITRKDTFY+RA+FSL+CSY+GDAM+ DL
Sbjct: 516 MLMGVQNNLCTPKSGEILVASTQDFLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDL 575
Query: 747 PTP 755
P+P
Sbjct: 576 PSP 578
>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Solanum
lycopersicum]
Length = 1390
Score = 414 bits (1064), Expect = e-113
Identities = 197/243 (81%), Positives = 220/243 (90%)
Frame = +3
Query: 27 GLVQRLKGKQGRFRGNLSGKRTEFTGRTVISPDPNLKITEVAIPMLMAKKLTFPERVSAH 206
G QRLKGKQGRFRGNLSGKR E+TGRTVISPDPNLKITEVAIP+LMA+ LT+PERVS H
Sbjct: 336 GFTQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSQH 395
Query: 207 NIEKLRQRIGNGPDKYPGANFILLPDGTRQHLRYVDKKTAASELKYGFIVERHLEDGDVI 386
NIEKLRQ + NGP+KYPGA FI PDG L + +K A ELK+G+IV+RHLEDGD++
Sbjct: 396 NIEKLRQCVRNGPNKYPGAKFIRHPDGNEMSLMFSSRKRYADELKFGYIVDRHLEDGDIV 455
Query: 387 LFNRQPSLHRMSIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAL 566
LFNRQPSLHRMSIM HRAR+MPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEAL
Sbjct: 456 LFNRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL 515
Query: 567 MLMGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRATFSLMCSYIGDAMESVDL 746
MLMGVQNNLCTPK+GEILVASTQDFLTSS+LITRKDTFY+RA+FSL+CSY+GDAM+ DL
Sbjct: 516 MLMGVQNNLCTPKSGEILVASTQDFLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDL 575
Query: 747 PTP 755
P+P
Sbjct: 576 PSP 578
>gb|EMJ09344.1| hypothetical protein PRUPE_ppa024521mg, partial [Prunus persica]
Length = 867
Score = 414 bits (1063), Expect = e-113
Identities = 199/243 (81%), Positives = 219/243 (90%)
Frame = +3
Query: 27 GLVQRLKGKQGRFRGNLSGKRTEFTGRTVISPDPNLKITEVAIPMLMAKKLTFPERVSAH 206
G VQRLKGK GRFRGNLSGKR E+TGRTVISPDPNLKITEV +P+ MA+ LT+PERVS H
Sbjct: 346 GFVQRLKGKGGRFRGNLSGKRVEYTGRTVISPDPNLKITEVGVPIKMAQILTYPERVSHH 405
Query: 207 NIEKLRQRIGNGPDKYPGANFILLPDGTRQHLRYVDKKTAASELKYGFIVERHLEDGDVI 386
NIEKLRQ + NGPDKYPGA + PDGT L+ V++K AA LKYG IVERHLEDGD++
Sbjct: 406 NIEKLRQCVSNGPDKYPGARMLRNPDGTEWSLK-VNRKNAADGLKYGDIVERHLEDGDIV 464
Query: 387 LFNRQPSLHRMSIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAL 566
LFNRQPSLHRMSIMCHRA+VMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA+
Sbjct: 465 LFNRQPSLHRMSIMCHRAKVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAV 524
Query: 567 MLMGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRATFSLMCSYIGDAMESVDL 746
MLMGVQNNLCTPKNGE+LVASTQDFLTSS+LITRKDTFYDRA+FSLMCSY+GD + VDL
Sbjct: 525 MLMGVQNNLCTPKNGEVLVASTQDFLTSSFLITRKDTFYDRASFSLMCSYMGDGTDPVDL 584
Query: 747 PTP 755
PTP
Sbjct: 585 PTP 587
>ref|XP_004169848.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
subunit rpc1-like, partial [Cucumis sativus]
Length = 693
Score = 413 bits (1062), Expect = e-113
Identities = 199/243 (81%), Positives = 216/243 (88%)
Frame = +3
Query: 27 GLVQRLKGKQGRFRGNLSGKRTEFTGRTVISPDPNLKITEVAIPMLMAKKLTFPERVSAH 206
G VQRLKGKQGRFRGNL GKR EFTGRTVISPDPNLKITEVA+P+ MA+ LT+PERV+ H
Sbjct: 33 GFVQRLKGKQGRFRGNLCGKRVEFTGRTVISPDPNLKITEVAVPIHMARILTYPERVTRH 92
Query: 207 NIEKLRQRIGNGPDKYPGANFILLPDGTRQHLRYVDKKTAASELKYGFIVERHLEDGDVI 386
NIEKLRQ + NGPDKYPGA + DG+ + L +K A ELKYG IVERHLEDGDV+
Sbjct: 93 NIEKLRQCVSNGPDKYPGARMLRHLDGSMRSLMISGRKRLADELKYGEIVERHLEDGDVV 152
Query: 387 LFNRQPSLHRMSIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAL 566
LFNRQPSLHRMSIMCHR RVMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA+
Sbjct: 153 LFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAI 212
Query: 567 MLMGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRATFSLMCSYIGDAMESVDL 746
+LMGVQNNLCTPKNGEILVASTQDFLTSS+LITRKDTFYDRA FSLMCSY+GD M+ VDL
Sbjct: 213 LLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDL 272
Query: 747 PTP 755
PTP
Sbjct: 273 PTP 275
>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
sativus]
Length = 1400
Score = 413 bits (1062), Expect = e-113
Identities = 199/243 (81%), Positives = 216/243 (88%)
Frame = +3
Query: 27 GLVQRLKGKQGRFRGNLSGKRTEFTGRTVISPDPNLKITEVAIPMLMAKKLTFPERVSAH 206
G VQRLKGKQGRFRGNL GKR EFTGRTVISPDPNLKITEVA+P+ MA+ LT+PERV+ H
Sbjct: 335 GFVQRLKGKQGRFRGNLCGKRVEFTGRTVISPDPNLKITEVAVPIHMARILTYPERVTRH 394
Query: 207 NIEKLRQRIGNGPDKYPGANFILLPDGTRQHLRYVDKKTAASELKYGFIVERHLEDGDVI 386
NIEKLRQ + NGPDKYPGA + DG+ + L +K A ELKYG IVERHLEDGDV+
Sbjct: 395 NIEKLRQCVSNGPDKYPGARMLRHLDGSMRSLMISGRKRLADELKYGEIVERHLEDGDVV 454
Query: 387 LFNRQPSLHRMSIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAL 566
LFNRQPSLHRMSIMCHR RVMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA+
Sbjct: 455 LFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAI 514
Query: 567 MLMGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRATFSLMCSYIGDAMESVDL 746
+LMGVQNNLCTPKNGEILVASTQDFLTSS+LITRKDTFYDRA FSLMCSY+GD M+ VDL
Sbjct: 515 LLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDL 574
Query: 747 PTP 755
PTP
Sbjct: 575 PTP 577
>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1|
PREDICTED: DNA-directed RNA polymerase III subunit
rpc1-like isoform X2 [Citrus sinensis]
Length = 1404
Score = 413 bits (1061), Expect = e-113
Identities = 202/243 (83%), Positives = 216/243 (88%)
Frame = +3
Query: 27 GLVQRLKGKQGRFRGNLSGKRTEFTGRTVISPDPNLKITEVAIPMLMAKKLTFPERVSAH 206
G VQRLKGKQGRFRGNLSGKR E+TGRTVISPDPNLKITEVAIP+ MA+ LT+PERVS H
Sbjct: 343 GFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIRMARILTYPERVSDH 402
Query: 207 NIEKLRQRIGNGPDKYPGANFILLPDGTRQHLRYVDKKTAASELKYGFIVERHLEDGDVI 386
NIEKLRQ I NGPDKYPGA I PDGT + L + A ELK G IV+RHLEDGDV+
Sbjct: 403 NIEKLRQCIQNGPDKYPGARMIRYPDGTARVLYGKFRNQLAVELKSGCIVDRHLEDGDVV 462
Query: 387 LFNRQPSLHRMSIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAL 566
LFNRQPSLHRMSIMCHRAR+MPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEAL
Sbjct: 463 LFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL 522
Query: 567 MLMGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRATFSLMCSYIGDAMESVDL 746
+LMGVQNNLCTPKNGEILVASTQDFLTSS+LITRKDTFYDRA FSLMC Y+GD M+ VDL
Sbjct: 523 LLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMGDGMDRVDL 582
Query: 747 PTP 755
PTP
Sbjct: 583 PTP 585