BLASTX nr result
ID: Zingiber23_contig00037895
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00037895
(315 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002867001.1| transcription factor IIB family protein [Ara... 94 2e-17
ref|XP_006411976.1| hypothetical protein EUTSA_v10024972mg [Eutr... 94 2e-17
ref|XP_006283489.1| hypothetical protein CARUB_v10004541mg, part... 92 5e-17
gb|AEI98626.1| hypothetical protein 111O18.13 [Coffea canephora] 92 5e-17
ref|NP_001078502.4| plant-specific TFIIB-related protein [Arabid... 91 2e-16
ref|NP_195383.1| plant-specific TFIIB-related protein [Arabidops... 91 2e-16
ref|XP_004512023.1| PREDICTED: transcription initiation factor I... 90 4e-16
ref|XP_004512022.1| PREDICTED: transcription initiation factor I... 90 4e-16
gb|EXB59113.1| Transcription initiation factor IIB [Morus notabi... 88 1e-15
gb|EOX91136.1| Plant-specific TFIIB-related protein [Theobroma c... 88 1e-15
gb|ESW28920.1| hypothetical protein PHAVU_002G028900g [Phaseolus... 87 2e-15
ref|XP_003611972.1| Transcription initiation factor IIB [Medicag... 87 2e-15
ref|XP_003636246.1| Transcription initiation factor like protein... 87 2e-15
ref|XP_003636245.1| Transcription initiation factor like protein... 87 2e-15
ref|XP_006573580.1| PREDICTED: uncharacterized protein LOC102662... 87 3e-15
ref|XP_002310216.2| hypothetical protein POPTR_0007s12640g [Popu... 87 3e-15
ref|XP_004232391.1| PREDICTED: transcription initiation factor I... 87 3e-15
ref|XP_006340594.1| PREDICTED: transcription initiation factor I... 85 1e-14
gb|ABU45201.1| unknown [Solanum bulbocastanum] 85 1e-14
ref|XP_004300624.1| PREDICTED: uncharacterized protein LOC101302... 83 3e-14
>ref|XP_002867001.1| transcription factor IIB family protein [Arabidopsis lyrata subsp.
lyrata] gi|297312837|gb|EFH43260.1| transcription factor
IIB family protein [Arabidopsis lyrata subsp. lyrata]
Length = 506
Score = 94.0 bits (232), Expect = 2e-17
Identities = 46/90 (51%), Positives = 54/90 (60%)
Frame = +2
Query: 44 VRCPYCQGTAGRSATTPYGRCVTECCSCGRVVEERQVYTHQLFPLRAFDYXXXXXXXXXX 223
++CPYC T GR ATT GR +TEC SCGRV+EERQ H LF LRA D
Sbjct: 1 MKCPYCSSTQGRCATTSSGRSITECSSCGRVMEERQTQNHHLFHLRAQD-----TPLCLV 55
Query: 224 XXXXSAAVEATNEDDEDPFHPTGFVTTFST 313
A + + ED+EDPF PTGF+T FST
Sbjct: 56 TSDLQTATQPSLEDEEDPFEPTGFITAFST 85
>ref|XP_006411976.1| hypothetical protein EUTSA_v10024972mg [Eutrema salsugineum]
gi|557113146|gb|ESQ53429.1| hypothetical protein
EUTSA_v10024972mg [Eutrema salsugineum]
Length = 503
Score = 93.6 bits (231), Expect = 2e-17
Identities = 46/90 (51%), Positives = 53/90 (58%)
Frame = +2
Query: 44 VRCPYCQGTAGRSATTPYGRCVTECCSCGRVVEERQVYTHQLFPLRAFDYXXXXXXXXXX 223
++CPYC GR ATT GR +TEC SCGRVVEERQ H LF LRA D
Sbjct: 1 MKCPYCSSAQGRCATTSSGRSITECSSCGRVVEERQTQNHHLFHLRAQD-----TPLCLV 55
Query: 224 XXXXSAAVEATNEDDEDPFHPTGFVTTFST 313
A + + ED+EDPF PTGF+T FST
Sbjct: 56 TPDLQTAAQPSPEDEEDPFEPTGFITAFST 85
>ref|XP_006283489.1| hypothetical protein CARUB_v10004541mg, partial [Capsella rubella]
gi|482552194|gb|EOA16387.1| hypothetical protein
CARUB_v10004541mg, partial [Capsella rubella]
Length = 540
Score = 92.4 bits (228), Expect = 5e-17
Identities = 48/103 (46%), Positives = 56/103 (54%)
Frame = +2
Query: 5 AVEPGRAINSMGRVRCPYCQGTAGRSATTPYGRCVTECCSCGRVVEERQVYTHQLFPLRA 184
A G N +++CPYC GR ATT GR +TEC SCGRVVEERQ LF LRA
Sbjct: 20 AKRKGNIQNRGKKMKCPYCSSAQGRCATTSSGRSITECSSCGRVVEERQTQNQHLFHLRA 79
Query: 185 FDYXXXXXXXXXXXXXXSAAVEATNEDDEDPFHPTGFVTTFST 313
D A + + ED+EDPF PTGF+T FST
Sbjct: 80 QD-----TPLCLVTSDLQTAAQPSPEDEEDPFEPTGFITAFST 117
>gb|AEI98626.1| hypothetical protein 111O18.13 [Coffea canephora]
Length = 526
Score = 92.4 bits (228), Expect = 5e-17
Identities = 45/93 (48%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Frame = +2
Query: 44 VRCPYCQGTAGRSATTPYGRCVTECCSCGRVVEERQVYTHQLFPLRAFDYXXXXXXXXXX 223
+RCPYC GR TT GR +TEC SCGRVVEERQ +H LF +RA D
Sbjct: 1 MRCPYCSAAQGRCTTTSSGRSITECTSCGRVVEERQSQSHHLFHIRAQDSPLCLVTSDLP 60
Query: 224 XXXXSAAVEA---TNEDDEDPFHPTGFVTTFST 313
A ++ +N DD+DPF PTGF+T FST
Sbjct: 61 TLPVPATTDSNPTSNSDDDDPFEPTGFITAFST 93
>ref|NP_001078502.4| plant-specific TFIIB-related protein [Arabidopsis thaliana]
gi|332661283|gb|AEE86683.1| plant-specific TFIIB-related
protein [Arabidopsis thaliana]
Length = 369
Score = 90.9 bits (224), Expect = 2e-16
Identities = 44/90 (48%), Positives = 52/90 (57%)
Frame = +2
Query: 44 VRCPYCQGTAGRSATTPYGRCVTECCSCGRVVEERQVYTHQLFPLRAFDYXXXXXXXXXX 223
++CPYC GR TT GR +TEC SCGRV+EERQ H LF LRA D
Sbjct: 1 MKCPYCSSAQGRCTTTSSGRSITECSSCGRVMEERQTQNHHLFHLRAQD-----TPLCLV 55
Query: 224 XXXXSAAVEATNEDDEDPFHPTGFVTTFST 313
A + + ED+EDPF PTGF+T FST
Sbjct: 56 TSDLQTAAQPSPEDEEDPFEPTGFITAFST 85
>ref|NP_195383.1| plant-specific TFIIB-related protein [Arabidopsis thaliana]
gi|2464915|emb|CAB16810.1| transcription initiation
factor like protein [Arabidopsis thaliana]
gi|7270613|emb|CAB80331.1| transcription initiation
factor like protein [Arabidopsis thaliana]
gi|16509378|emb|CAC82714.1| TFIIB-related protein
[Arabidopsis thaliana] gi|30102720|gb|AAP21278.1|
At4g37010 [Arabidopsis thaliana]
gi|39545884|gb|AAR28005.1| TFIIB5/pBrp [Arabidopsis
thaliana] gi|332661282|gb|AEE86682.1| plant-specific
TFIIB-related protein [Arabidopsis thaliana]
Length = 503
Score = 90.9 bits (224), Expect = 2e-16
Identities = 44/90 (48%), Positives = 52/90 (57%)
Frame = +2
Query: 44 VRCPYCQGTAGRSATTPYGRCVTECCSCGRVVEERQVYTHQLFPLRAFDYXXXXXXXXXX 223
++CPYC GR TT GR +TEC SCGRV+EERQ H LF LRA D
Sbjct: 1 MKCPYCSSAQGRCTTTSSGRSITECSSCGRVMEERQTQNHHLFHLRAQD-----TPLCLV 55
Query: 224 XXXXSAAVEATNEDDEDPFHPTGFVTTFST 313
A + + ED+EDPF PTGF+T FST
Sbjct: 56 TSDLQTAAQPSPEDEEDPFEPTGFITAFST 85
>ref|XP_004512023.1| PREDICTED: transcription initiation factor IIB 7-like isoform X2
[Cicer arietinum]
Length = 475
Score = 89.7 bits (221), Expect = 4e-16
Identities = 43/90 (47%), Positives = 53/90 (58%)
Frame = +2
Query: 44 VRCPYCQGTAGRSATTPYGRCVTECCSCGRVVEERQVYTHQLFPLRAFDYXXXXXXXXXX 223
++CPYC GR ATT G+ +TEC SCGRVVEERQ + H LF LRA D
Sbjct: 1 MKCPYCSAAQGRCATTSTGKSITECTSCGRVVEERQSHPHHLFHLRAQDNPLCLVTSDLP 60
Query: 224 XXXXSAAVEATNEDDEDPFHPTGFVTTFST 313
+ + +DEDPF PTGF+T+FST
Sbjct: 61 LPTLHSQNNNEHPNDEDPFDPTGFITSFST 90
>ref|XP_004512022.1| PREDICTED: transcription initiation factor IIB 7-like isoform X1
[Cicer arietinum]
Length = 486
Score = 89.7 bits (221), Expect = 4e-16
Identities = 43/90 (47%), Positives = 53/90 (58%)
Frame = +2
Query: 44 VRCPYCQGTAGRSATTPYGRCVTECCSCGRVVEERQVYTHQLFPLRAFDYXXXXXXXXXX 223
++CPYC GR ATT G+ +TEC SCGRVVEERQ + H LF LRA D
Sbjct: 1 MKCPYCSAAQGRCATTSTGKSITECTSCGRVVEERQSHPHHLFHLRAQDNPLCLVTSDLP 60
Query: 224 XXXXSAAVEATNEDDEDPFHPTGFVTTFST 313
+ + +DEDPF PTGF+T+FST
Sbjct: 61 LPTLHSQNNNEHPNDEDPFDPTGFITSFST 90
>gb|EXB59113.1| Transcription initiation factor IIB [Morus notabilis]
Length = 514
Score = 88.2 bits (217), Expect = 1e-15
Identities = 46/92 (50%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Frame = +2
Query: 44 VRCPYCQGTAGRSATTPYGRCVTECCSCGRVVEERQVYTHQLFPLRAFDYXXXXXXXXXX 223
+RCPYC GR ATT GR +TEC SCGRVVEERQ + H LF LRA D
Sbjct: 1 MRCPYCSAGQGRCATTSGGRSITECSSCGRVVEERQSHPHHLFHLRAQDNPLCLVTSDLP 60
Query: 224 XXXXSAAVEATNE--DDEDPFHPTGFVTTFST 313
N DD+DPF PTGF+T FST
Sbjct: 61 SLQSHHHPNDNNNAADDDDPFEPTGFITAFST 92
>gb|EOX91136.1| Plant-specific TFIIB-related protein [Theobroma cacao]
Length = 527
Score = 88.2 bits (217), Expect = 1e-15
Identities = 44/90 (48%), Positives = 51/90 (56%)
Frame = +2
Query: 44 VRCPYCQGTAGRSATTPYGRCVTECCSCGRVVEERQVYTHQLFPLRAFDYXXXXXXXXXX 223
++CPYC GR ATT GR +TEC SCGRVVEERQ H LF +RA D
Sbjct: 1 MKCPYCSAAQGRCATTTTGRSITECTSCGRVVEERQFQNHHLFHVRAQD-----TPLCLV 55
Query: 224 XXXXSAAVEATNEDDEDPFHPTGFVTTFST 313
A A D++DPF PTGF+T FST
Sbjct: 56 TSEIPALASAFQVDEDDPFEPTGFITAFST 85
>gb|ESW28920.1| hypothetical protein PHAVU_002G028900g [Phaseolus vulgaris]
Length = 495
Score = 87.4 bits (215), Expect = 2e-15
Identities = 42/90 (46%), Positives = 51/90 (56%)
Frame = +2
Query: 44 VRCPYCQGTAGRSATTPYGRCVTECCSCGRVVEERQVYTHQLFPLRAFDYXXXXXXXXXX 223
++CPYC GR ATT GR +TEC SCGRV+EERQ + H +F +RA D
Sbjct: 1 MKCPYCSAAQGRCATTSSGRSITECTSCGRVMEERQSHPHHVFHMRAQD-------NPLC 53
Query: 224 XXXXSAAVEATNEDDEDPFHPTGFVTTFST 313
+ DDEDPF PTGF+T FST
Sbjct: 54 LVTSDLPLPLNQNDDEDPFEPTGFITAFST 83
>ref|XP_003611972.1| Transcription initiation factor IIB [Medicago truncatula]
gi|358344389|ref|XP_003636272.1| Transcription
initiation factor IIB [Medicago truncatula]
gi|355502207|gb|AES83410.1| Transcription initiation
factor IIB [Medicago truncatula]
gi|355513307|gb|AES94930.1| Transcription initiation
factor IIB [Medicago truncatula]
gi|388496684|gb|AFK36408.1| unknown [Medicago
truncatula]
Length = 487
Score = 87.4 bits (215), Expect = 2e-15
Identities = 43/90 (47%), Positives = 52/90 (57%)
Frame = +2
Query: 44 VRCPYCQGTAGRSATTPYGRCVTECCSCGRVVEERQVYTHQLFPLRAFDYXXXXXXXXXX 223
++CPYC GR TT G+ +TEC SCGRVVEERQ + H +F LRA D
Sbjct: 1 MKCPYCSAAQGRCTTTTTGKSITECTSCGRVVEERQSHPHHIFHLRAQDNPLCLVTPDLP 60
Query: 224 XXXXSAAVEATNEDDEDPFHPTGFVTTFST 313
+ TNE +EDPF PTGF+T FST
Sbjct: 61 PPTLNQTNTDTNE-EEDPFEPTGFITAFST 89
>ref|XP_003636246.1| Transcription initiation factor like protein [Medicago truncatula]
gi|355502181|gb|AES83384.1| Transcription initiation
factor like protein [Medicago truncatula]
Length = 226
Score = 87.4 bits (215), Expect = 2e-15
Identities = 43/90 (47%), Positives = 52/90 (57%)
Frame = +2
Query: 44 VRCPYCQGTAGRSATTPYGRCVTECCSCGRVVEERQVYTHQLFPLRAFDYXXXXXXXXXX 223
++CPYC GR TT G+ +TEC SCGRVVEERQ + H +F LRA D
Sbjct: 1 MKCPYCSAAQGRCTTTTTGKSITECTSCGRVVEERQSHPHHIFHLRAQDNPLCLVTPDLP 60
Query: 224 XXXXSAAVEATNEDDEDPFHPTGFVTTFST 313
+ TNE +EDPF PTGF+T FST
Sbjct: 61 PPTLNQTNTDTNE-EEDPFEPTGFITAFST 89
>ref|XP_003636245.1| Transcription initiation factor like protein [Medicago truncatula]
gi|355502180|gb|AES83383.1| Transcription initiation
factor like protein [Medicago truncatula]
Length = 124
Score = 87.4 bits (215), Expect = 2e-15
Identities = 43/90 (47%), Positives = 52/90 (57%)
Frame = +2
Query: 44 VRCPYCQGTAGRSATTPYGRCVTECCSCGRVVEERQVYTHQLFPLRAFDYXXXXXXXXXX 223
++CPYC GR TT G+ +TEC SCGRVVEERQ + H +F LRA D
Sbjct: 1 MKCPYCSAAQGRCTTTTTGKSITECTSCGRVVEERQSHPHHIFHLRAQDNPLCLVTPDLP 60
Query: 224 XXXXSAAVEATNEDDEDPFHPTGFVTTFST 313
+ TNE +EDPF PTGF+T FST
Sbjct: 61 PPTLNQTNTDTNE-EEDPFEPTGFITAFST 89
>ref|XP_006573580.1| PREDICTED: uncharacterized protein LOC102662353 [Glycine max]
Length = 503
Score = 86.7 bits (213), Expect = 3e-15
Identities = 44/92 (47%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Frame = +2
Query: 44 VRCPYCQGTAGRSATTPYGRCVTECCSCGRVVEERQVYTHQLFPLRAFDYXXXXXXXXXX 223
++CPYC GR ATT GR +TEC SCGRVVEERQ + H +F +RA D
Sbjct: 1 MKCPYCSAAQGRCATTSSGRSITECTSCGRVVEERQSHPHHVFHVRAQD-------NPLC 53
Query: 224 XXXXSAAVEATNE--DDEDPFHPTGFVTTFST 313
A+ A N+ ++EDPF PTGF+T FST
Sbjct: 54 LVTSDLALPALNQNNEEEDPFEPTGFITAFST 85
>ref|XP_002310216.2| hypothetical protein POPTR_0007s12640g [Populus trichocarpa]
gi|550334739|gb|EEE90666.2| hypothetical protein
POPTR_0007s12640g [Populus trichocarpa]
Length = 514
Score = 86.7 bits (213), Expect = 3e-15
Identities = 44/91 (48%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Frame = +2
Query: 44 VRCPYCQGTAGRSATTPY-GRCVTECCSCGRVVEERQVYTHQLFPLRAFDYXXXXXXXXX 220
++CPYC T GR ATT RC+TEC SCGRVVEERQ + H LF LRA D
Sbjct: 1 MKCPYCSATQGRCATTTTTNRCITECTSCGRVVEERQFHPHHLFHLRAQD------TPLC 54
Query: 221 XXXXXSAAVEATNEDDEDPFHPTGFVTTFST 313
+ ++++EDPF PTGF+T+FST
Sbjct: 55 LVTSDLPTLHHHHQNEEDPFEPTGFITSFST 85
>ref|XP_004232391.1| PREDICTED: transcription initiation factor IIB-like [Solanum
lycopersicum] gi|9858771|gb|AAG01118.1|AF273333_3
BAC19.3 [Solanum lycopersicum]
Length = 425
Score = 86.7 bits (213), Expect = 3e-15
Identities = 45/90 (50%), Positives = 53/90 (58%)
Frame = +2
Query: 44 VRCPYCQGTAGRSATTPYGRCVTECCSCGRVVEERQVYTHQLFPLRAFDYXXXXXXXXXX 223
+RCPYC GR ++ GR +TEC SCGRVVEER +H LF RA D
Sbjct: 1 MRCPYCSAEQGRCTSSTSGRPITECTSCGRVVEERLTQSHHLFHTRAQD----SPLCLAT 56
Query: 224 XXXXSAAVEATNEDDEDPFHPTGFVTTFST 313
+ + ATN DDEDPF PTGF+TTFST
Sbjct: 57 SDLPTLPISATN-DDEDPFEPTGFITTFST 85
>ref|XP_006340594.1| PREDICTED: transcription initiation factor IIB-like [Solanum
tuberosum]
Length = 425
Score = 84.7 bits (208), Expect = 1e-14
Identities = 44/90 (48%), Positives = 52/90 (57%)
Frame = +2
Query: 44 VRCPYCQGTAGRSATTPYGRCVTECCSCGRVVEERQVYTHQLFPLRAFDYXXXXXXXXXX 223
+RCPYC GR ++ GR +TEC SCGRVVEER +H LF RA D
Sbjct: 1 MRCPYCSAEQGRCTSSTSGRPITECTSCGRVVEERLTQSHHLFHTRAQD----SPLCLAT 56
Query: 224 XXXXSAAVEATNEDDEDPFHPTGFVTTFST 313
+ + ATN DDEDPF PTGF+T FST
Sbjct: 57 SDLPTLPISATN-DDEDPFEPTGFITAFST 85
>gb|ABU45201.1| unknown [Solanum bulbocastanum]
Length = 194
Score = 84.7 bits (208), Expect = 1e-14
Identities = 44/90 (48%), Positives = 52/90 (57%)
Frame = +2
Query: 44 VRCPYCQGTAGRSATTPYGRCVTECCSCGRVVEERQVYTHQLFPLRAFDYXXXXXXXXXX 223
+RCPYC GR ++ GR +TEC SCGRVVEER +H LF RA D
Sbjct: 1 MRCPYCSAEQGRCTSSTSGRPITECTSCGRVVEERLTQSHHLFHTRAQD----SPLCLAT 56
Query: 224 XXXXSAAVEATNEDDEDPFHPTGFVTTFST 313
+ + ATN DDEDPF PTGF+T FST
Sbjct: 57 SDLPTPPISATN-DDEDPFEPTGFITAFST 85
>ref|XP_004300624.1| PREDICTED: uncharacterized protein LOC101302943 [Fragaria vesca
subsp. vesca]
Length = 519
Score = 83.2 bits (204), Expect = 3e-14
Identities = 43/92 (46%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Frame = +2
Query: 44 VRCPYCQGTAGRSATTPYGRCVTECCSCGRVVEERQVYTHQLFPLRAFDYXXXXXXXXXX 223
++CPYC G GR ATT R +TEC SCGRVVEERQ H LF LRA D
Sbjct: 1 MKCPYCSGGQGRCATTTSRRSITECTSCGRVVEERQSQFHHLFHLRAQDTPLCLVTSDLP 60
Query: 224 XXXXSAAV--EATNEDDEDPFHPTGFVTTFST 313
+ ++ +EDPF PTGF+T FST
Sbjct: 61 TPPPPPPQNDDVPDDSEEDPFEPTGFITAFST 92