BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00037795
         (724 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADQ38902.1| bHLH transcription factor [Musa acuminata AAA Group]   144   4e-32
gb|EOY22175.1| Transcription factor BIM1, putative isoform 3 [Th...   142   1e-31
gb|EOY22174.1| Transcription factor BIM1, putative isoform 2 [Th...   142   1e-31
gb|EOY22173.1| Transcription factor BIM1, putative isoform 1 [Th...   142   1e-31
gb|ACN34591.1| unknown [Zea mays] gi|414885909|tpg|DAA61923.1| T...   142   1e-31
ref|XP_004957106.1| PREDICTED: transcription factor BIM2-like is...   139   7e-31
ref|XP_004957105.1| PREDICTED: transcription factor BIM2-like is...   139   7e-31
dbj|BAK07145.1| predicted protein [Hordeum vulgare subsp. vulgare]    139   7e-31
dbj|BAJ84943.1| predicted protein [Hordeum vulgare subsp. vulgare]    139   7e-31
ref|XP_004957107.1| PREDICTED: transcription factor BIM2-like is...   139   9e-31
tpg|DAA61920.1| TPA: putative HLH DNA-binding domain superfamily...   138   2e-30
gb|ACN36276.1| unknown [Zea mays] gi|414885908|tpg|DAA61922.1| T...   138   2e-30
gb|ACL52596.1| unknown [Zea mays] gi|414885905|tpg|DAA61919.1| T...   138   2e-30
ref|NP_001130805.1| putative HLH DNA-binding domain superfamily ...   138   2e-30
gb|ACG28929.1| transcription factor BIM2 [Zea mays]                   136   8e-30
ref|XP_003578285.1| PREDICTED: transcription factor BIM1-like [B...   135   1e-29
ref|XP_002460394.1| hypothetical protein SORBIDRAFT_02g027460 [S...   135   1e-29
ref|XP_006661342.1| PREDICTED: transcription factor BIM1-like [O...   132   9e-29
ref|XP_004973763.1| PREDICTED: transcription factor BIM1-like [S...   132   1e-28
gb|EEC84750.1| hypothetical protein OsI_31749 [Oryza sativa Indi...   131   3e-28

>gb|ADQ38902.1| bHLH transcription factor [Musa acuminata AAA Group]
          Length = 331

 Score =  144 bits (362), Expect = 4e-32
 Identities = 97/238 (40%), Positives = 137/238 (57%)
 Frame = -3

Query: 722 DKASFLLEVIEYIRFLQEKVQKYELSYPECSQDDVKLMPGKLSLQQNSNQAPANVLLVSH 543
           DKASFLLEVIEYI+FLQEKVQKYE S+P  +Q++ KLMP       +SNQ P + ++   
Sbjct: 79  DKASFLLEVIEYIKFLQEKVQKYE-SFPGWNQENEKLMPW------SSNQGPGDGMVDPP 131

Query: 542 VVNNDSAAPAHVVSEKTNEIKIAGARPTLISSTHNPLKTCVVSGGISYKTIQTTTNPVNN 363
            +  + +   H+ S K  +  I GA P  +S+ HN  +  +  G +    +   +N   +
Sbjct: 132 NLTKNGSQSGHLFSGKFVDSSIPGA-PMSLSNAHNVAEADMSPGAV---LVPMQSNYYAS 187

Query: 362 LAFTHNLLQTKLFPLERETNTTQSQSQPFEAYNSASQDQCGWSESCSLADGAVINQRLNE 183
           +      +Q    P ER  + +          N  SQ Q  W  S  +AD  + +  LNE
Sbjct: 188 VGRGSGFMQ----PQERVISDSD---------NPVSQSQSEWQSSSCMADCNLSSGMLNE 234

Query: 182 KEELIIDEGTINVSTAYSHELLNTLTKALKSSGIDLSQANIAVQINLGKRAVERRSGA 9
            EELIIDEGTI++S+ YS  LL  L++A+ SSG+DLSQA+I+VQINLGK A +R + A
Sbjct: 235 HEELIIDEGTISISSVYSQGLLTALSQAMASSGVDLSQASISVQINLGKGASKRPTTA 292


>gb|EOY22175.1| Transcription factor BIM1, putative isoform 3 [Theobroma cacao]
          Length = 564

 Score =  142 bits (358), Expect = 1e-31
 Identities = 102/243 (41%), Positives = 141/243 (58%), Gaps = 3/243 (1%)
 Frame = -3

Query: 722 DKASFLLEVIEYIRFLQEKVQKYELSYPECSQDDVKLMPGKLSLQQNSNQAPANVLLVSH 543
           DKASFLLEVIEYI+FLQEKV KYE +Y   S +  KLMP +     N+++   N    S 
Sbjct: 297 DKASFLLEVIEYIQFLQEKVHKYEGTYQGWSHEPSKLMPWR-----NNHRPTENYADQSQ 351

Query: 542 VVNNDSAAPAHVVSEKTNEIKIAGARPTLISSTHNPLKTCVVSGGISYKTIQTTTNPVNN 363
            +N  SA PA V S K +E  I  A PT+  S HNP+++ + S   +++ I  +   +N 
Sbjct: 352 AINGVSA-PALVFSAKFDEKNITVA-PTIPGSAHNPIESDM-STATTFRAIDLSPGMMNK 408

Query: 362 LAFTHNLLQTKLFPLERETNTTQS--QSQPFEAYNSASQDQCGWSESCSLA-DGAVINQR 192
                  LQ   F   + T          P +  N ASQ Q     S S   DGA+ +++
Sbjct: 409 TMPFPVSLQPNFFASAQSTGAAAQLVPRLPSDVANCASQPQSIACHSGSFTTDGALPSEK 468

Query: 191 LNEKEELIIDEGTINVSTAYSHELLNTLTKALKSSGIDLSQANIAVQINLGKRAVERRSG 12
           L E +EL I+ GTI++S+ YS  LLNTLT+AL++SG+DLS A+I+VQI LGKR+  R + 
Sbjct: 469 LKE-QELTIEGGTISISSVYSQGLLNTLTQALQTSGVDLSHASISVQIELGKRSSSRPTA 527

Query: 11  AAS 3
           +AS
Sbjct: 528 SAS 530


>gb|EOY22174.1| Transcription factor BIM1, putative isoform 2 [Theobroma cacao]
          Length = 564

 Score =  142 bits (358), Expect = 1e-31
 Identities = 102/243 (41%), Positives = 141/243 (58%), Gaps = 3/243 (1%)
 Frame = -3

Query: 722 DKASFLLEVIEYIRFLQEKVQKYELSYPECSQDDVKLMPGKLSLQQNSNQAPANVLLVSH 543
           DKASFLLEVIEYI+FLQEKV KYE +Y   S +  KLMP +     N+++   N    S 
Sbjct: 297 DKASFLLEVIEYIQFLQEKVHKYEGTYQGWSHEPSKLMPWR-----NNHRPTENYADQSQ 351

Query: 542 VVNNDSAAPAHVVSEKTNEIKIAGARPTLISSTHNPLKTCVVSGGISYKTIQTTTNPVNN 363
            +N  SA PA V S K +E  I  A PT+  S HNP+++ + S   +++ I  +   +N 
Sbjct: 352 AINGVSA-PALVFSAKFDEKNITVA-PTIPGSAHNPIESDM-STATTFRAIDLSPGMMNK 408

Query: 362 LAFTHNLLQTKLFPLERETNTTQS--QSQPFEAYNSASQDQCGWSESCSLA-DGAVINQR 192
                  LQ   F   + T          P +  N ASQ Q     S S   DGA+ +++
Sbjct: 409 TMPFPVSLQPNFFASAQSTGAAAQLVPRLPSDVANCASQPQSIACHSGSFTTDGALPSEK 468

Query: 191 LNEKEELIIDEGTINVSTAYSHELLNTLTKALKSSGIDLSQANIAVQINLGKRAVERRSG 12
           L E +EL I+ GTI++S+ YS  LLNTLT+AL++SG+DLS A+I+VQI LGKR+  R + 
Sbjct: 469 LKE-QELTIEGGTISISSVYSQGLLNTLTQALQTSGVDLSHASISVQIELGKRSSSRPTA 527

Query: 11  AAS 3
           +AS
Sbjct: 528 SAS 530


>gb|EOY22173.1| Transcription factor BIM1, putative isoform 1 [Theobroma cacao]
          Length = 614

 Score =  142 bits (358), Expect = 1e-31
 Identities = 102/243 (41%), Positives = 141/243 (58%), Gaps = 3/243 (1%)
 Frame = -3

Query: 722  DKASFLLEVIEYIRFLQEKVQKYELSYPECSQDDVKLMPGKLSLQQNSNQAPANVLLVSH 543
            DKASFLLEVIEYI+FLQEKV KYE +Y   S +  KLMP +     N+++   N    S 
Sbjct: 347  DKASFLLEVIEYIQFLQEKVHKYEGTYQGWSHEPSKLMPWR-----NNHRPTENYADQSQ 401

Query: 542  VVNNDSAAPAHVVSEKTNEIKIAGARPTLISSTHNPLKTCVVSGGISYKTIQTTTNPVNN 363
             +N  SA PA V S K +E  I  A PT+  S HNP+++ + S   +++ I  +   +N 
Sbjct: 402  AINGVSA-PALVFSAKFDEKNITVA-PTIPGSAHNPIESDM-STATTFRAIDLSPGMMNK 458

Query: 362  LAFTHNLLQTKLFPLERETNTTQS--QSQPFEAYNSASQDQCGWSESCSLA-DGAVINQR 192
                   LQ   F   + T          P +  N ASQ Q     S S   DGA+ +++
Sbjct: 459  TMPFPVSLQPNFFASAQSTGAAAQLVPRLPSDVANCASQPQSIACHSGSFTTDGALPSEK 518

Query: 191  LNEKEELIIDEGTINVSTAYSHELLNTLTKALKSSGIDLSQANIAVQINLGKRAVERRSG 12
            L E +EL I+ GTI++S+ YS  LLNTLT+AL++SG+DLS A+I+VQI LGKR+  R + 
Sbjct: 519  LKE-QELTIEGGTISISSVYSQGLLNTLTQALQTSGVDLSHASISVQIELGKRSSSRPTA 577

Query: 11   AAS 3
            +AS
Sbjct: 578  SAS 580


>gb|ACN34591.1| unknown [Zea mays] gi|414885909|tpg|DAA61923.1| TPA: putative HLH
           DNA-binding domain superfamily protein [Zea mays]
          Length = 327

 Score =  142 bits (357), Expect = 1e-31
 Identities = 96/240 (40%), Positives = 136/240 (56%)
 Frame = -3

Query: 722 DKASFLLEVIEYIRFLQEKVQKYELSYPECSQDDVKLMPGKLSLQQNSNQAPANVLLVSH 543
           DKA+FLLEVIEYIRFLQEKVQKYE ++PE +Q++ K++P   S  Q S  +P +    SH
Sbjct: 89  DKATFLLEVIEYIRFLQEKVQKYEATFPEWNQENAKMLP--WSKGQISGDSPPD---PSH 143

Query: 542 VVNNDSAAPAHVVSEKTNEIKIAGARPTLISSTHNPLKTCVVSGGISYKTIQTTTNPVNN 363
            + N S+  ++   +  +   I  +     S   + ++T  ++ G  Y++ +TT N    
Sbjct: 144 FMRNGSSPGSNFTGKLDDNHNIVTS--AAASGAQDQVETDHMASG-CYRSAETTAN---- 196

Query: 362 LAFTHNLLQTKLFPLERETNTTQSQSQPFEAYNSASQDQCGWSESCSLADGAVINQRLNE 183
                             TN   SQSQP             W+    + D AV ++ LN 
Sbjct: 197 -----------------FTNNAMSQSQP------------QWTGPSPVDDSAVNSETLN- 226

Query: 182 KEELIIDEGTINVSTAYSHELLNTLTKALKSSGIDLSQANIAVQINLGKRAVERRSGAAS 3
            ++L+IDEGTI VS+ YS ELLN+LT AL+SSG+DLSQANI+VQIN+GKRA +R +   S
Sbjct: 227 NQQLVIDEGTIRVSSNYSQELLNSLTHALQSSGVDLSQANISVQINMGKRAAKRPAAGVS 286


>ref|XP_004957106.1| PREDICTED: transcription factor BIM2-like isoform X2 [Setaria
           italica]
          Length = 513

 Score =  139 bits (351), Expect = 7e-31
 Identities = 97/248 (39%), Positives = 135/248 (54%), Gaps = 8/248 (3%)
 Frame = -3

Query: 722 DKASFLLEVIEYIRFLQEKVQKYELSYPECSQDDVKLMPGKLSL-------QQNSNQAPA 564
           DKA+FLLEVIEYIRFLQEKV KYE ++PE +Q++ K++P            +Q+  Q P 
Sbjct: 264 DKATFLLEVIEYIRFLQEKVTKYEATFPEWNQENAKMLPWSNMYFRSFWKNEQSKGQIPG 323

Query: 563 NVLL-VSHVVNNDSAAPAHVVSEKTNEIKIAGARPTLISSTHNPLKTCVVSGGISYKTIQ 387
             L   SH + N S+  ++   +              +   HN + +   SG       Q
Sbjct: 324 ESLPDPSHFMRNGSSPGSNFTGK--------------LDDNHNMVTSAAASGAQD----Q 365

Query: 386 TTTNPVNNLAFTHNLLQTKLFPLERETNTTQSQSQPFEAYNSASQDQCGWSESCSLADGA 207
           T T+P+ ++ F        +      TN T SQSQP             W+    + D A
Sbjct: 366 TETDPMASMCFRSAETPANI------TNNTLSQSQP------------QWTGPSPVDDCA 407

Query: 206 VINQRLNEKEELIIDEGTINVSTAYSHELLNTLTKALKSSGIDLSQANIAVQINLGKRAV 27
           V ++ LN  + L I+EGTI+VS+ YS ELLN+LT AL+SSG+DLSQA+I+VQINLGKRAV
Sbjct: 408 VNSEMLNN-QPLAINEGTISVSSQYSQELLNSLTHALQSSGVDLSQASISVQINLGKRAV 466

Query: 26  ERRSGAAS 3
           +R +   S
Sbjct: 467 KRPAAGVS 474


>ref|XP_004957105.1| PREDICTED: transcription factor BIM2-like isoform X1 [Setaria
           italica]
          Length = 510

 Score =  139 bits (351), Expect = 7e-31
 Identities = 97/248 (39%), Positives = 135/248 (54%), Gaps = 8/248 (3%)
 Frame = -3

Query: 722 DKASFLLEVIEYIRFLQEKVQKYELSYPECSQDDVKLMPGKLSL-------QQNSNQAPA 564
           DKA+FLLEVIEYIRFLQEKV KYE ++PE +Q++ K++P            +Q+  Q P 
Sbjct: 261 DKATFLLEVIEYIRFLQEKVTKYEATFPEWNQENAKMLPWSNMYFRSFWKNEQSKGQIPG 320

Query: 563 NVLL-VSHVVNNDSAAPAHVVSEKTNEIKIAGARPTLISSTHNPLKTCVVSGGISYKTIQ 387
             L   SH + N S+  ++   +              +   HN + +   SG       Q
Sbjct: 321 ESLPDPSHFMRNGSSPGSNFTGK--------------LDDNHNMVTSAAASGAQD----Q 362

Query: 386 TTTNPVNNLAFTHNLLQTKLFPLERETNTTQSQSQPFEAYNSASQDQCGWSESCSLADGA 207
           T T+P+ ++ F        +      TN T SQSQP             W+    + D A
Sbjct: 363 TETDPMASMCFRSAETPANI------TNNTLSQSQP------------QWTGPSPVDDCA 404

Query: 206 VINQRLNEKEELIIDEGTINVSTAYSHELLNTLTKALKSSGIDLSQANIAVQINLGKRAV 27
           V ++ LN  + L I+EGTI+VS+ YS ELLN+LT AL+SSG+DLSQA+I+VQINLGKRAV
Sbjct: 405 VNSEMLNN-QPLAINEGTISVSSQYSQELLNSLTHALQSSGVDLSQASISVQINLGKRAV 463

Query: 26  ERRSGAAS 3
           +R +   S
Sbjct: 464 KRPAAGVS 471


>dbj|BAK07145.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 378

 Score =  139 bits (351), Expect = 7e-31
 Identities = 99/247 (40%), Positives = 136/247 (55%), Gaps = 7/247 (2%)
 Frame = -3

Query: 722 DKASFLLEVIEYIRFLQEKVQKYELSYPECSQDDVKLMP-------GKLSLQQNSNQAPA 564
           DKA+FLLEVIEYIRFLQEK QKYE S+PE +Q++ KL+P             Q+  Q P 
Sbjct: 125 DKATFLLEVIEYIRFLQEKAQKYEASFPEWNQENAKLLPWSNMYFRSSWKNAQSKGQIPE 184

Query: 563 NVLLVSHVVNNDSAAPAHVVSEKTNEIKIAGARPTLISSTHNPLKTCVVSGGISYKTIQT 384
           +          + A+P   ++ K ++   A A    IS   +  +T  ++  +S ++  T
Sbjct: 185 DASPDPSQFIRNGASPGFNITGKLDDNHTAVASAA-ISGAQDQAETDHMAS-VSCRSADT 242

Query: 383 TTNPVNNLAFTHNLLQTKLFPLERETNTTQSQSQPFEAYNSASQDQCGWSESCSLADGAV 204
            TN +NN++                      QSQP             W++   + D AV
Sbjct: 243 PTNILNNVS---------------------PQSQP------------QWADPSGVDDCAV 269

Query: 203 INQRLNEKEELIIDEGTINVSTAYSHELLNTLTKALKSSGIDLSQANIAVQINLGKRAVE 24
            +  LN  ++L+IDEGTI+VS+ YS ELLNTLT AL+SSGIDLSQANI+VQINLGKRAV+
Sbjct: 270 NSDVLNN-QQLMIDEGTISVSSQYSQELLNTLTHALQSSGIDLSQANISVQINLGKRAVK 328

Query: 23  RRSGAAS 3
           R +   S
Sbjct: 329 RPTAGQS 335


>dbj|BAJ84943.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 605

 Score =  139 bits (351), Expect = 7e-31
 Identities = 99/247 (40%), Positives = 136/247 (55%), Gaps = 7/247 (2%)
 Frame = -3

Query: 722 DKASFLLEVIEYIRFLQEKVQKYELSYPECSQDDVKLMP-------GKLSLQQNSNQAPA 564
           DKA+FLLEVIEYIRFLQEK QKYE S+PE +Q++ KL+P             Q+  Q P 
Sbjct: 352 DKATFLLEVIEYIRFLQEKAQKYEASFPEWNQENAKLLPWSNMYFRSSWKNAQSKGQIPE 411

Query: 563 NVLLVSHVVNNDSAAPAHVVSEKTNEIKIAGARPTLISSTHNPLKTCVVSGGISYKTIQT 384
           +          + A+P   ++ K ++   A A    IS   +  +T  ++  +S ++  T
Sbjct: 412 DASPDPSQFIRNGASPGFNITGKLDDNHTAVASAA-ISGAQDQAETDHMAS-VSCRSADT 469

Query: 383 TTNPVNNLAFTHNLLQTKLFPLERETNTTQSQSQPFEAYNSASQDQCGWSESCSLADGAV 204
            TN +NN++                      QSQP             W++   + D AV
Sbjct: 470 PTNILNNVS---------------------PQSQP------------QWADPSGVDDCAV 496

Query: 203 INQRLNEKEELIIDEGTINVSTAYSHELLNTLTKALKSSGIDLSQANIAVQINLGKRAVE 24
            +  LN  ++L+IDEGTI+VS+ YS ELLNTLT AL+SSGIDLSQANI+VQINLGKRAV+
Sbjct: 497 NSDVLNN-QQLMIDEGTISVSSQYSQELLNTLTHALQSSGIDLSQANISVQINLGKRAVK 555

Query: 23  RRSGAAS 3
           R +   S
Sbjct: 556 RPTAGQS 562


>ref|XP_004957107.1| PREDICTED: transcription factor BIM2-like isoform X3 [Setaria
           italica]
          Length = 497

 Score =  139 bits (350), Expect = 9e-31
 Identities = 96/241 (39%), Positives = 133/241 (55%), Gaps = 1/241 (0%)
 Frame = -3

Query: 722 DKASFLLEVIEYIRFLQEKVQKYELSYPECSQDDVKLMPGKLSLQQNSNQAPANVLL-VS 546
           DKA+FLLEVIEYIRFLQEKV KYE ++PE +Q++ K++P       +  Q P   L   S
Sbjct: 261 DKATFLLEVIEYIRFLQEKVTKYEATFPEWNQENAKMLPW------SKGQIPGESLPDPS 314

Query: 545 HVVNNDSAAPAHVVSEKTNEIKIAGARPTLISSTHNPLKTCVVSGGISYKTIQTTTNPVN 366
           H + N S+  ++   +              +   HN + +   SG       QT T+P+ 
Sbjct: 315 HFMRNGSSPGSNFTGK--------------LDDNHNMVTSAAASGAQD----QTETDPMA 356

Query: 365 NLAFTHNLLQTKLFPLERETNTTQSQSQPFEAYNSASQDQCGWSESCSLADGAVINQRLN 186
           ++ F        +      TN T SQSQP             W+    + D AV ++ LN
Sbjct: 357 SMCFRSAETPANI------TNNTLSQSQP------------QWTGPSPVDDCAVNSEMLN 398

Query: 185 EKEELIIDEGTINVSTAYSHELLNTLTKALKSSGIDLSQANIAVQINLGKRAVERRSGAA 6
             + L I+EGTI+VS+ YS ELLN+LT AL+SSG+DLSQA+I+VQINLGKRAV+R +   
Sbjct: 399 N-QPLAINEGTISVSSQYSQELLNSLTHALQSSGVDLSQASISVQINLGKRAVKRPAAGV 457

Query: 5   S 3
           S
Sbjct: 458 S 458


>tpg|DAA61920.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
          Length = 514

 Score =  138 bits (347), Expect = 2e-30
 Identities = 96/251 (38%), Positives = 136/251 (54%), Gaps = 11/251 (4%)
 Frame = -3

Query: 722 DKASFLLEVIEYIRFLQEKVQKYELSYPECSQDDVKLMP-----------GKLSLQQNSN 576
           DKA+FLLEVIEYIRFLQEKVQKYE ++PE +Q++ K++P              S  Q S 
Sbjct: 263 DKATFLLEVIEYIRFLQEKVQKYEATFPEWNQENAKMLPWSNMYFRSFWKNAQSKGQISG 322

Query: 575 QAPANVLLVSHVVNNDSAAPAHVVSEKTNEIKIAGARPTLISSTHNPLKTCVVSGGISYK 396
            +P +    SH + N S+  ++   +  +   I  +     S   + ++T  ++ G  Y+
Sbjct: 323 DSPPD---PSHFMRNGSSPGSNFTGKLDDNHNIVTS--AAASGAQDQVETDHMASG-CYR 376

Query: 395 TIQTTTNPVNNLAFTHNLLQTKLFPLERETNTTQSQSQPFEAYNSASQDQCGWSESCSLA 216
           + +TT N                      TN   SQSQP             W+    + 
Sbjct: 377 SAETTAN---------------------FTNNAMSQSQP------------QWTGPSPVD 403

Query: 215 DGAVINQRLNEKEELIIDEGTINVSTAYSHELLNTLTKALKSSGIDLSQANIAVQINLGK 36
           D AV ++ LN  ++L+IDEGTI VS+ YS ELLN+LT AL+SSG+DLSQANI+VQIN+GK
Sbjct: 404 DSAVNSETLN-NQQLVIDEGTIRVSSNYSQELLNSLTHALQSSGVDLSQANISVQINMGK 462

Query: 35  RAVERRSGAAS 3
           RA +R +   S
Sbjct: 463 RAAKRPAAGVS 473


>gb|ACN36276.1| unknown [Zea mays] gi|414885908|tpg|DAA61922.1| TPA: putative HLH
           DNA-binding domain superfamily protein [Zea mays]
          Length = 340

 Score =  138 bits (347), Expect = 2e-30
 Identities = 96/251 (38%), Positives = 136/251 (54%), Gaps = 11/251 (4%)
 Frame = -3

Query: 722 DKASFLLEVIEYIRFLQEKVQKYELSYPECSQDDVKLMP-----------GKLSLQQNSN 576
           DKA+FLLEVIEYIRFLQEKVQKYE ++PE +Q++ K++P              S  Q S 
Sbjct: 89  DKATFLLEVIEYIRFLQEKVQKYEATFPEWNQENAKMLPWSNMYFRSFWKNAQSKGQISG 148

Query: 575 QAPANVLLVSHVVNNDSAAPAHVVSEKTNEIKIAGARPTLISSTHNPLKTCVVSGGISYK 396
            +P +    SH + N S+  ++   +  +   I  +     S   + ++T  ++ G  Y+
Sbjct: 149 DSPPD---PSHFMRNGSSPGSNFTGKLDDNHNIVTS--AAASGAQDQVETDHMASG-CYR 202

Query: 395 TIQTTTNPVNNLAFTHNLLQTKLFPLERETNTTQSQSQPFEAYNSASQDQCGWSESCSLA 216
           + +TT N                      TN   SQSQP             W+    + 
Sbjct: 203 SAETTAN---------------------FTNNAMSQSQP------------QWTGPSPVD 229

Query: 215 DGAVINQRLNEKEELIIDEGTINVSTAYSHELLNTLTKALKSSGIDLSQANIAVQINLGK 36
           D AV ++ LN  ++L+IDEGTI VS+ YS ELLN+LT AL+SSG+DLSQANI+VQIN+GK
Sbjct: 230 DSAVNSETLN-NQQLVIDEGTIRVSSNYSQELLNSLTHALQSSGVDLSQANISVQINMGK 288

Query: 35  RAVERRSGAAS 3
           RA +R +   S
Sbjct: 289 RAAKRPAAGVS 299


>gb|ACL52596.1| unknown [Zea mays] gi|414885905|tpg|DAA61919.1| TPA: putative HLH
           DNA-binding domain superfamily protein [Zea mays]
          Length = 515

 Score =  138 bits (347), Expect = 2e-30
 Identities = 96/251 (38%), Positives = 136/251 (54%), Gaps = 11/251 (4%)
 Frame = -3

Query: 722 DKASFLLEVIEYIRFLQEKVQKYELSYPECSQDDVKLMP-----------GKLSLQQNSN 576
           DKA+FLLEVIEYIRFLQEKVQKYE ++PE +Q++ K++P              S  Q S 
Sbjct: 264 DKATFLLEVIEYIRFLQEKVQKYEATFPEWNQENAKMLPWSNMYFRSFWKNAQSKGQISG 323

Query: 575 QAPANVLLVSHVVNNDSAAPAHVVSEKTNEIKIAGARPTLISSTHNPLKTCVVSGGISYK 396
            +P +    SH + N S+  ++   +  +   I  +     S   + ++T  ++ G  Y+
Sbjct: 324 DSPPD---PSHFMRNGSSPGSNFTGKLDDNHNIVTS--AAASGAQDQVETDHMASG-CYR 377

Query: 395 TIQTTTNPVNNLAFTHNLLQTKLFPLERETNTTQSQSQPFEAYNSASQDQCGWSESCSLA 216
           + +TT N                      TN   SQSQP             W+    + 
Sbjct: 378 SAETTAN---------------------FTNNAMSQSQP------------QWTGPSPVD 404

Query: 215 DGAVINQRLNEKEELIIDEGTINVSTAYSHELLNTLTKALKSSGIDLSQANIAVQINLGK 36
           D AV ++ LN  ++L+IDEGTI VS+ YS ELLN+LT AL+SSG+DLSQANI+VQIN+GK
Sbjct: 405 DSAVNSETLN-NQQLVIDEGTIRVSSNYSQELLNSLTHALQSSGVDLSQANISVQINMGK 463

Query: 35  RAVERRSGAAS 3
           RA +R +   S
Sbjct: 464 RAAKRPAAGVS 474


>ref|NP_001130805.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
           gi|194690162|gb|ACF79165.1| unknown [Zea mays]
           gi|414885907|tpg|DAA61921.1| TPA: putative HLH
           DNA-binding domain superfamily protein [Zea mays]
          Length = 478

 Score =  138 bits (347), Expect = 2e-30
 Identities = 96/251 (38%), Positives = 136/251 (54%), Gaps = 11/251 (4%)
 Frame = -3

Query: 722 DKASFLLEVIEYIRFLQEKVQKYELSYPECSQDDVKLMP-----------GKLSLQQNSN 576
           DKA+FLLEVIEYIRFLQEKVQKYE ++PE +Q++ K++P              S  Q S 
Sbjct: 227 DKATFLLEVIEYIRFLQEKVQKYEATFPEWNQENAKMLPWSNMYFRSFWKNAQSKGQISG 286

Query: 575 QAPANVLLVSHVVNNDSAAPAHVVSEKTNEIKIAGARPTLISSTHNPLKTCVVSGGISYK 396
            +P +    SH + N S+  ++   +  +   I  +     S   + ++T  ++ G  Y+
Sbjct: 287 DSPPD---PSHFMRNGSSPGSNFTGKLDDNHNIVTS--AAASGAQDQVETDHMASG-CYR 340

Query: 395 TIQTTTNPVNNLAFTHNLLQTKLFPLERETNTTQSQSQPFEAYNSASQDQCGWSESCSLA 216
           + +TT N                      TN   SQSQP             W+    + 
Sbjct: 341 SAETTAN---------------------FTNNAMSQSQP------------QWTGPSPVD 367

Query: 215 DGAVINQRLNEKEELIIDEGTINVSTAYSHELLNTLTKALKSSGIDLSQANIAVQINLGK 36
           D AV ++ LN  ++L+IDEGTI VS+ YS ELLN+LT AL+SSG+DLSQANI+VQIN+GK
Sbjct: 368 DSAVNSETLN-NQQLVIDEGTIRVSSNYSQELLNSLTHALQSSGVDLSQANISVQINMGK 426

Query: 35  RAVERRSGAAS 3
           RA +R +   S
Sbjct: 427 RAAKRPAAGVS 437


>gb|ACG28929.1| transcription factor BIM2 [Zea mays]
          Length = 514

 Score =  136 bits (342), Expect = 8e-30
 Identities = 95/251 (37%), Positives = 135/251 (53%), Gaps = 11/251 (4%)
 Frame = -3

Query: 722 DKASFLLEVIEYIRFLQEKVQKYELSYPECSQDDVKLMP-----------GKLSLQQNSN 576
           DKA+FLLEVIEYIRFLQEKVQKYE ++PE +Q++ K++P              S  Q S 
Sbjct: 263 DKATFLLEVIEYIRFLQEKVQKYEATFPEWNQENAKMLPWSNMYFRSFWKNAQSKGQISG 322

Query: 575 QAPANVLLVSHVVNNDSAAPAHVVSEKTNEIKIAGARPTLISSTHNPLKTCVVSGGISYK 396
            +P +    SH + N S+  ++   +  +   I  +     S   +  +T  ++ G  Y+
Sbjct: 323 DSPPD---PSHFMRNGSSPGSNFTGKLDDNHNIVTS--AAASGAQDQAETDHMASG-CYR 376

Query: 395 TIQTTTNPVNNLAFTHNLLQTKLFPLERETNTTQSQSQPFEAYNSASQDQCGWSESCSLA 216
           + +TT N                      TN   SQSQP             W+    + 
Sbjct: 377 SAETTAN---------------------FTNNAMSQSQP------------QWTGPSPVD 403

Query: 215 DGAVINQRLNEKEELIIDEGTINVSTAYSHELLNTLTKALKSSGIDLSQANIAVQINLGK 36
           D A+ ++ LN  ++L+IDEGTI VS+ YS ELLN+LT AL+SSG+DLSQANI+VQIN+GK
Sbjct: 404 DSAMNSETLN-NQQLVIDEGTIRVSSNYSQELLNSLTHALQSSGVDLSQANISVQINMGK 462

Query: 35  RAVERRSGAAS 3
           RA +R +   S
Sbjct: 463 RAAKRPAAGVS 473


>ref|XP_003578285.1| PREDICTED: transcription factor BIM1-like [Brachypodium distachyon]
          Length = 477

 Score =  135 bits (341), Expect = 1e-29
 Identities = 99/242 (40%), Positives = 128/242 (52%), Gaps = 8/242 (3%)
 Frame = -3

Query: 722 DKASFLLEVIEYIRFLQEKVQKYELSYPECSQDDVKLMP-------GKLSLQQNSNQAPA 564
           DKA+FLLEVIEYIRFLQEK QKYE S+PE +Q++ KL+P             Q+  Q P 
Sbjct: 234 DKATFLLEVIEYIRFLQEKAQKYEASFPEWNQENAKLLPWSNIYFRSSWKSAQSKGQIPE 293

Query: 563 NVLL-VSHVVNNDSAAPAHVVSEKTNEIKIAGARPTLISSTHNPLKTCVVSGGISYKTIQ 387
           + L   S  V N S+   ++  +              +   H    T V SG ++     
Sbjct: 294 DALPDPSQFVTNGSSPGFNITGK--------------LDDNH----TTVASGAVA----- 330

Query: 386 TTTNPVNNLAFTHNLLQTKLFPLERETNTTQSQSQPFEAYNSASQDQCGWSESCSLADGA 207
                  +LA   ++        E   N T          N  SQ Q  W+    + D A
Sbjct: 331 ----GTPDLAENDHMASVSCRSAETPINITN---------NVTSQYQPQWAGPSGVDDCA 377

Query: 206 VINQRLNEKEELIIDEGTINVSTAYSHELLNTLTKALKSSGIDLSQANIAVQINLGKRAV 27
           V +  LN+ ++L IDEGTI+VS+ YS ELLNTLT AL+SSGIDLSQANI+VQINLGKRAV
Sbjct: 378 VNSSMLND-QQLTIDEGTISVSSQYSQELLNTLTHALQSSGIDLSQANISVQINLGKRAV 436

Query: 26  ER 21
           +R
Sbjct: 437 KR 438


>ref|XP_002460394.1| hypothetical protein SORBIDRAFT_02g027460 [Sorghum bicolor]
           gi|241923771|gb|EER96915.1| hypothetical protein
           SORBIDRAFT_02g027460 [Sorghum bicolor]
          Length = 507

 Score =  135 bits (341), Expect = 1e-29
 Identities = 94/234 (40%), Positives = 129/234 (55%)
 Frame = -3

Query: 722 DKASFLLEVIEYIRFLQEKVQKYELSYPECSQDDVKLMPGKLSLQQNSNQAPANVLLVSH 543
           DKA+FLLEVIEYIRFLQEKVQKYE ++PE +Q++ K++P   S  Q    +P +    SH
Sbjct: 271 DKATFLLEVIEYIRFLQEKVQKYEATFPEWNQENAKMLPW--SKGQIPGDSPPDP---SH 325

Query: 542 VVNNDSAAPAHVVSEKTNEIKIAGARPTLISSTHNPLKTCVVSGGISYKTIQTTTNPVNN 363
            + N S+  ++   +              I   HN + +   SG               +
Sbjct: 326 FMRNGSSPGSNFTGK--------------IDDNHNIVTSAAASGA-------------QD 358

Query: 362 LAFTHNLLQTKLFPLERETNTTQSQSQPFEAYNSASQDQCGWSESCSLADGAVINQRLNE 183
            A T ++        E   N T          N+ SQ Q  W+    + D AV ++ LN 
Sbjct: 359 QAETDHMASGCYRSAETPANITN---------NAISQSQPQWTGPSPVDDSAVNSEMLNN 409

Query: 182 KEELIIDEGTINVSTAYSHELLNTLTKALKSSGIDLSQANIAVQINLGKRAVER 21
            ++L IDEGTI+VS+ YS ELLN+LT AL+SSG+DLSQA+I+VQINLGKRAV+R
Sbjct: 410 -QQLAIDEGTISVSSNYSQELLNSLTHALQSSGVDLSQASISVQINLGKRAVKR 462


>ref|XP_006661342.1| PREDICTED: transcription factor BIM1-like [Oryza brachyantha]
          Length = 442

 Score =  132 bits (333), Expect = 9e-29
 Identities = 96/249 (38%), Positives = 135/249 (54%), Gaps = 9/249 (3%)
 Frame = -3

Query: 722 DKASFLLEVIEYIRFLQEKVQKYELSYPECSQDDVKLMPGK-------LSLQQNSNQAPA 564
           DKA+FLLEVIEYIRFLQEKVQKYE S PE +Q++ K++P             Q+  Q P 
Sbjct: 190 DKATFLLEVIEYIRFLQEKVQKYETSAPEWNQENAKILPWSNIYFRSFWKNSQSKGQTPG 249

Query: 563 NVLL-VSHVVNNDSAAPAHVVSEKT-NEIKIAGARPTLISSTHNPLKTCVVSGGISYKTI 390
           + L   S  + N S++  +   +   N   +  A     S     L+T   +  +SY++ 
Sbjct: 250 DDLPDPSQFIRNGSSSGFNFTGKPDDNHTMVTSAAA---SGAQEQLETDHTAS-VSYRSA 305

Query: 389 QTTTNPVNNLAFTHNLLQTKLFPLERETNTTQSQSQPFEAYNSASQDQCGWSESCSLADG 210
           +T TN  NN+                   T+Q Q+Q              W+    + D 
Sbjct: 306 ETPTNITNNV-------------------TSQVQTQ--------------WASPSGVDDC 332

Query: 209 AVINQRLNEKEELIIDEGTINVSTAYSHELLNTLTKALKSSGIDLSQANIAVQINLGKRA 30
           A+ ++ LN  ++L IDEGTI++ST YS +LL TLT AL+SSG+DLSQA+++VQINLGKRA
Sbjct: 333 AMNSEILNN-QQLAIDEGTISLSTQYSQQLLGTLTHALESSGVDLSQASLSVQINLGKRA 391

Query: 29  VERRSGAAS 3
           V+R  G  S
Sbjct: 392 VKRPGGDGS 400


>ref|XP_004973763.1| PREDICTED: transcription factor BIM1-like [Setaria italica]
          Length = 495

 Score =  132 bits (332), Expect = 1e-28
 Identities = 98/242 (40%), Positives = 131/242 (54%), Gaps = 8/242 (3%)
 Frame = -3

Query: 722 DKASFLLEVIEYIRFLQEKVQKYELSYPECSQDDVKLMPG-----KLSLQQNSNQAPANV 558
           DKASFLLEVIEYIRFLQEKVQKYE+S+PE +Q++ K+MP      + S + + N+   N 
Sbjct: 246 DKASFLLEVIEYIRFLQEKVQKYEVSHPEWNQENAKIMPWSNIYFRSSWKNSQNKDEING 305

Query: 557 LLVSH---VVNNDSAAPAHVVSEKTNEIKIAGARPTLISSTHNPLKTCVVSGGISYKTIQ 387
            +VS     V  + ++P    + KT +   AGA  T   +     +   + G + +K  +
Sbjct: 306 DMVSSDPTQVTKNGSSPRFPFAAKTEDHNNAGAFETAPGAQ----ELAELKGCVPFKQAE 361

Query: 386 TTTNPVNNLAFTHNLLQTKLFPLERETNTTQSQSQPFEAYNSASQDQCGWSESCSLADGA 207
           T  N                      TNT  SQ Q  +  NS+  D           D A
Sbjct: 362 TPNNV---------------------TNTVASQQQA-QLTNSSPSD-----------DSA 388

Query: 206 VINQRLNEKEELIIDEGTINVSTAYSHELLNTLTKALKSSGIDLSQANIAVQINLGKRAV 27
           V N  LN  E L IDEGTI++S+ YS  LL TL  AL++SG+DLSQA+I+VQINLGKRA 
Sbjct: 389 VPNGMLNNPE-LAIDEGTISLSSQYSQGLLTTLNLALQNSGVDLSQASISVQINLGKRAT 447

Query: 26  ER 21
           +R
Sbjct: 448 KR 449


>gb|EEC84750.1| hypothetical protein OsI_31749 [Oryza sativa Indica Group]
          Length = 507

 Score =  131 bits (329), Expect = 3e-28
 Identities = 92/249 (36%), Positives = 132/249 (53%), Gaps = 15/249 (6%)
 Frame = -3

Query: 722 DKASFLLEVIEYIRFLQEKVQKYELSYPECSQDDVKLMPGK----LSLQQNSNQAPANVL 555
           DKA+FLLEVIEYIRFLQEKVQK+E S PE +Q++ K++P       S  +NS     N  
Sbjct: 255 DKATFLLEVIEYIRFLQEKVQKFEASVPEWNQENAKILPWSNIYFRSFWKNSQSKGQNP- 313

Query: 554 LVSHVVNNDSAAPAHVVSEKTNEIKIAGARPTLISSTHNPLKTCVVSGG----------- 408
                  +D   P+  +   ++       +P      HN + +   SG            
Sbjct: 314 ------GDDLPDPSQFIRNGSSSGYNFTGKP---DDNHNMVTSAAASGAQELVETDHAAS 364

Query: 407 ISYKTIQTTTNPVNNLAFTHNLLQTKLFPLERETNTTQSQSQPFEAYNSASQDQCGWSES 228
           +SY++ +T TN  NN+                   T+Q+Q+Q              W+  
Sbjct: 365 VSYRSAETPTNITNNV-------------------TSQAQAQ--------------WASP 391

Query: 227 CSLADGAVINQRLNEKEELIIDEGTINVSTAYSHELLNTLTKALKSSGIDLSQANIAVQI 48
             + D A+ ++ LN  ++L IDEGTI++S+ YS +LL TLT AL+SSG+DLSQA+I+VQI
Sbjct: 392 AGVDDCAMNSEMLNN-QQLAIDEGTISLSSQYSQQLLGTLTHALESSGVDLSQASISVQI 450

Query: 47  NLGKRAVER 21
           NLGKRAV+R
Sbjct: 451 NLGKRAVKR 459