BLASTX nr result
ID: Zingiber23_contig00037753
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00037753
(434 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymer... 70 4e-10
ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citr... 68 1e-09
ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citr... 68 1e-09
ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citr... 68 1e-09
emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris] 68 1e-09
gb|EOY03847.1| DNA/RNA polymerases superfamily protein [Theobrom... 68 1e-09
gb|EOY01555.1| DNA-directed RNA polymerase isoform 3 [Theobroma ... 68 1e-09
gb|EOY01553.1| DNA-directed RNA polymerase isoform 1 [Theobroma ... 68 1e-09
sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymeras... 68 1e-09
ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 67 2e-09
gb|EMJ26582.1| hypothetical protein PRUPE_ppa000780mg [Prunus pe... 67 2e-09
ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 67 2e-09
sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras... 67 2e-09
emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum] 67 2e-09
ref|XP_004304185.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 67 3e-09
emb|CBL87031.1| RNA polymerase [Nuphar advena] 66 4e-09
gb|EXB44918.1| DNA-directed RNA polymerase 1 [Morus notabilis] 66 6e-09
ref|XP_006484275.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 65 9e-09
ref|XP_006437832.1| hypothetical protein CICLE_v10030633mg [Citr... 65 9e-09
ref|XP_006384251.1| hypothetical protein POPTR_0004s11060g [Popu... 65 9e-09
>dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
sylvestris]
Length = 1002
Score = 69.7 bits (169), Expect = 4e-10
Identities = 45/117 (38%), Positives = 60/117 (51%)
Frame = +1
Query: 82 GLISDSRSFASVAEAVSSTDLGETEXXXXXXXXXXXXXXXXXXCLFELKNSDIRRGKGKE 261
G + RS+ S AEA++ST +T+ L E N +
Sbjct: 106 GSLGFLRSYGSAAEAIASTSEEDTDEIQE---------------LIEEMNKE-------- 142
Query: 262 GGVGSEIKLNQQFQYAPRKVAGMGAARHTALRRRQIKIETEAWEQAAKEYQELLMDM 432
+K N Q + P+ + GMG ++ LRRRQIK+ETEAWE+AAKEYQELLMDM
Sbjct: 143 ---NEALKTNLQPKQ-PKTIGGMGVGKYNLLRRRQIKVETEAWEEAAKEYQELLMDM 195
>ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
gi|557533046|gb|ESR44229.1| hypothetical protein
CICLE_v10010966mg [Citrus clementina]
Length = 928
Score = 68.2 bits (165), Expect = 1e-09
Identities = 46/111 (41%), Positives = 58/111 (52%)
Frame = +1
Query: 100 RSFASVAEAVSSTDLGETEXXXXXXXXXXXXXXXXXXCLFELKNSDIRRGKGKEGGVGSE 279
R +A+VAEAVSSTD+ E L E+K + R G E G G
Sbjct: 130 RGYATVAEAVSSTDVEED----------VSIVEEIQELLQEMKKEEQREG---ENGGGRN 176
Query: 280 IKLNQQFQYAPRKVAGMGAARHTALRRRQIKIETEAWEQAAKEYQELLMDM 432
+ R GMG+ ++ L+ RQ+KIETEAWEQAA EY+ELLMDM
Sbjct: 177 RR---------RVARGMGSGKYRMLKMRQVKIETEAWEQAANEYRELLMDM 218
>ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
gi|557533045|gb|ESR44228.1| hypothetical protein
CICLE_v10010966mg [Citrus clementina]
Length = 1030
Score = 68.2 bits (165), Expect = 1e-09
Identities = 46/111 (41%), Positives = 58/111 (52%)
Frame = +1
Query: 100 RSFASVAEAVSSTDLGETEXXXXXXXXXXXXXXXXXXCLFELKNSDIRRGKGKEGGVGSE 279
R +A+VAEAVSSTD+ E L E+K + R G E G G
Sbjct: 130 RGYATVAEAVSSTDVEED----------VSIVEEIQELLQEMKKEEQREG---ENGGGRN 176
Query: 280 IKLNQQFQYAPRKVAGMGAARHTALRRRQIKIETEAWEQAAKEYQELLMDM 432
+ R GMG+ ++ L+ RQ+KIETEAWEQAA EY+ELLMDM
Sbjct: 177 RR---------RVARGMGSGKYRMLKMRQVKIETEAWEQAANEYRELLMDM 218
>ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
gi|557533044|gb|ESR44227.1| hypothetical protein
CICLE_v10010966mg [Citrus clementina]
Length = 933
Score = 68.2 bits (165), Expect = 1e-09
Identities = 46/111 (41%), Positives = 58/111 (52%)
Frame = +1
Query: 100 RSFASVAEAVSSTDLGETEXXXXXXXXXXXXXXXXXXCLFELKNSDIRRGKGKEGGVGSE 279
R +A+VAEAVSSTD+ E L E+K + R G E G G
Sbjct: 130 RGYATVAEAVSSTDVEED----------VSIVEEIQELLQEMKKEEQREG---ENGGGRN 176
Query: 280 IKLNQQFQYAPRKVAGMGAARHTALRRRQIKIETEAWEQAAKEYQELLMDM 432
+ R GMG+ ++ L+ RQ+KIETEAWEQAA EY+ELLMDM
Sbjct: 177 RR---------RVARGMGSGKYRMLKMRQVKIETEAWEQAANEYRELLMDM 218
>emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]
Length = 1002
Score = 67.8 bits (164), Expect = 1e-09
Identities = 46/120 (38%), Positives = 61/120 (50%), Gaps = 3/120 (2%)
Frame = +1
Query: 82 GLISDSRSFASVAEAVSST---DLGETEXXXXXXXXXXXXXXXXXXCLFELKNSDIRRGK 252
G + RS+ S AEA++ST D+ E + L E N +
Sbjct: 106 GSLGFLRSYGSAAEAIASTSEEDIDEIQE------------------LIEEMNKE----- 142
Query: 253 GKEGGVGSEIKLNQQFQYAPRKVAGMGAARHTALRRRQIKIETEAWEQAAKEYQELLMDM 432
+K N Q + P+ + GMG ++ LRRRQIK+ETEAWE+AAKEYQELLMDM
Sbjct: 143 ------NEALKTNLQPKQ-PKTIGGMGVGKYNLLRRRQIKVETEAWEEAAKEYQELLMDM 195
>gb|EOY03847.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1100
Score = 67.8 bits (164), Expect = 1e-09
Identities = 57/153 (37%), Positives = 79/153 (51%), Gaps = 9/153 (5%)
Frame = +1
Query: 1 FLDAEFRQSGEGLPYL-------FQTNSSILGPYGLISDSRSFASVAEAVSSTDLGETEX 159
FLD R+ GE L + F + + +G GL R + SVAEAVSSTD+ E
Sbjct: 96 FLDMGGRRIGEVLTNVEYIGKQSFGSPRNEIGCSGLCP--RGYVSVAEAVSSTDVEED-- 151
Query: 160 XXXXXXXXXXXXXXXXXCLFELKN--SDIRRGKGKEGGVGSEIKLNQQFQYAPRKVAGMG 333
+ E+K ++++ + +E G ++ Q R GMG
Sbjct: 152 ---------------VSVVEEIKELLDEMKKEQRRETG-----NRRRRCQIIER---GMG 188
Query: 334 AARHTALRRRQIKIETEAWEQAAKEYQELLMDM 432
+++ LRRRQ+KIETEAWEQAAKEY+ELLMDM
Sbjct: 189 ESKYRFLRRRQVKIETEAWEQAAKEYRELLMDM 221
>gb|EOY01555.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
Length = 932
Score = 67.8 bits (164), Expect = 1e-09
Identities = 33/46 (71%), Positives = 39/46 (84%), Gaps = 1/46 (2%)
Frame = +1
Query: 298 FQYAPRKVA-GMGAARHTALRRRQIKIETEAWEQAAKEYQELLMDM 432
F P+KVA GMG A++ L++RQIKIETEAWE+AAKEYQELLMDM
Sbjct: 135 FLVQPKKVAEGMGVAKYNTLKKRQIKIETEAWEEAAKEYQELLMDM 180
>gb|EOY01553.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
gi|508709657|gb|EOY01554.1| DNA-directed RNA polymerase
isoform 1 [Theobroma cacao]
Length = 996
Score = 67.8 bits (164), Expect = 1e-09
Identities = 33/46 (71%), Positives = 39/46 (84%), Gaps = 1/46 (2%)
Frame = +1
Query: 298 FQYAPRKVA-GMGAARHTALRRRQIKIETEAWEQAAKEYQELLMDM 432
F P+KVA GMG A++ L++RQIKIETEAWE+AAKEYQELLMDM
Sbjct: 135 FLVQPKKVAEGMGVAKYNTLKKRQIKIETEAWEEAAKEYQELLMDM 180
>sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymerase 1, mitochondrial;
AltName: Full=NsRpoT-A; AltName: Full=T7
bacteriophage-type single subunit RNA polymerase 1;
Flags: Precursor gi|15824083|dbj|BAB69431.1| T7
bacteriophage-type single subunit RNA polymerase
[Nicotiana sylvestris]
Length = 1002
Score = 67.8 bits (164), Expect = 1e-09
Identities = 46/120 (38%), Positives = 61/120 (50%), Gaps = 3/120 (2%)
Frame = +1
Query: 82 GLISDSRSFASVAEAVSST---DLGETEXXXXXXXXXXXXXXXXXXCLFELKNSDIRRGK 252
G + RS+ S AEA++ST D+ E + L E N +
Sbjct: 106 GSLGFLRSYGSAAEAIASTSEEDIDEIQE------------------LIEEMNKE----- 142
Query: 253 GKEGGVGSEIKLNQQFQYAPRKVAGMGAARHTALRRRQIKIETEAWEQAAKEYQELLMDM 432
+K N Q + P+ + GMG ++ LRRRQIK+ETEAWE+AAKEYQELLMDM
Sbjct: 143 ------NEALKTNLQPKQ-PKTIGGMGVGKYNLLRRRQIKVETEAWEEAAKEYQELLMDM 195
>ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like
[Solanum tuberosum]
Length = 993
Score = 67.4 bits (163), Expect = 2e-09
Identities = 48/125 (38%), Positives = 63/125 (50%), Gaps = 3/125 (2%)
Frame = +1
Query: 67 ILGPYGLISDSRSFASVAEAVSST---DLGETEXXXXXXXXXXXXXXXXXXCLFELKNSD 237
+ G G++ RS+ S AEA++ST D+ E + L E N +
Sbjct: 96 VCGSLGIL---RSYGSAAEAIASTSEEDIDEIQE------------------LIEEMNKE 134
Query: 238 IRRGKGKEGGVGSEIKLNQQFQYAPRKVAGMGAARHTALRRRQIKIETEAWEQAAKEYQE 417
+K N Q + P+ V GMG ++ LRRRQIK+ETEAWE AAKEYQE
Sbjct: 135 -----------NEALKTNLQPKQ-PKTVGGMGIGKYNLLRRRQIKVETEAWEDAAKEYQE 182
Query: 418 LLMDM 432
LLMDM
Sbjct: 183 LLMDM 187
>gb|EMJ26582.1| hypothetical protein PRUPE_ppa000780mg [Prunus persica]
Length = 1006
Score = 67.4 bits (163), Expect = 2e-09
Identities = 46/122 (37%), Positives = 63/122 (51%), Gaps = 3/122 (2%)
Frame = +1
Query: 76 PYGL---ISDSRSFASVAEAVSSTDLGETEXXXXXXXXXXXXXXXXXXCLFELKNSDIRR 246
PYG+ + ++ +ASVAEA++STD GE + + E+ IR
Sbjct: 84 PYGISGFCNYAKGYASVAEAIASTD-GEEDSSGSEE-------------IQEMLEDLIRE 129
Query: 247 GKGKEGGVGSEIKLNQQFQYAPRKVAGMGAARHTALRRRQIKIETEAWEQAAKEYQELLM 426
E F+ R V GMG ++ LR+RQIK+ETEAW++AAKEYQELL
Sbjct: 130 NNMVES----------HFKQPKRVVVGMGVGKYNLLRKRQIKLETEAWQEAAKEYQELLA 179
Query: 427 DM 432
DM
Sbjct: 180 DM 181
>ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like
[Solanum lycopersicum]
Length = 993
Score = 67.0 bits (162), Expect = 2e-09
Identities = 47/120 (39%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Frame = +1
Query: 82 GLISDSRSFASVAEAVSST---DLGETEXXXXXXXXXXXXXXXXXXCLFELKNSDIRRGK 252
G + RS+ S AEA++ST D+ E + L E N +
Sbjct: 98 GSLGVLRSYGSAAEAIASTSEEDIDEIQE------------------LIEEMNKE----- 134
Query: 253 GKEGGVGSEIKLNQQFQYAPRKVAGMGAARHTALRRRQIKIETEAWEQAAKEYQELLMDM 432
+K N Q + P+ V GMG ++ LRRRQIK+ETEAWE AAKEYQELLMDM
Sbjct: 135 ------NEALKTNLQPKQ-PKTVGGMGIGKYNLLRRRQIKVETEAWEDAAKEYQELLMDM 187
>sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial;
AltName: Full=NictaRpoT1-tom; AltName: Full=T7
bacteriophage-type single subunit RNA polymerase 1B;
Flags: Precursor
Length = 1002
Score = 67.0 bits (162), Expect = 2e-09
Identities = 29/41 (70%), Positives = 35/41 (85%)
Frame = +1
Query: 310 PRKVAGMGAARHTALRRRQIKIETEAWEQAAKEYQELLMDM 432
P+ + GMG ++ LRRRQIK+ETEAWE+AAKEYQELLMDM
Sbjct: 155 PKTIGGMGVGKYNFLRRRQIKVETEAWEEAAKEYQELLMDM 195
>emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]
Length = 1002
Score = 67.0 bits (162), Expect = 2e-09
Identities = 29/41 (70%), Positives = 35/41 (85%)
Frame = +1
Query: 310 PRKVAGMGAARHTALRRRQIKIETEAWEQAAKEYQELLMDM 432
P+ + GMG ++ LRRRQIK+ETEAWE+AAKEYQELLMDM
Sbjct: 155 PKTIGGMGVGKYNFLRRRQIKVETEAWEEAAKEYQELLMDM 195
>ref|XP_004304185.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like [Fragaria vesca subsp.
vesca]
Length = 1262
Score = 66.6 bits (161), Expect = 3e-09
Identities = 43/111 (38%), Positives = 57/111 (51%)
Frame = +1
Query: 100 RSFASVAEAVSSTDLGETEXXXXXXXXXXXXXXXXXXCLFELKNSDIRRGKGKEGGVGSE 279
+ +ASVAEA+SSTD + L E+K D R+
Sbjct: 363 KGYASVAEAISSTDASSSTDAEEEVCVVDELQEI----LKEMKKEDKRQSA--------- 409
Query: 280 IKLNQQFQYAPRKVAGMGAARHTALRRRQIKIETEAWEQAAKEYQELLMDM 432
+++ +V GMG ++ LRRRQIKIETEAWE+AA EY+ELLMDM
Sbjct: 410 ----YRWRIEQARVRGMGEGKYLMLRRRQIKIETEAWERAADEYRELLMDM 456
>emb|CBL87031.1| RNA polymerase [Nuphar advena]
Length = 990
Score = 66.2 bits (160), Expect = 4e-09
Identities = 45/116 (38%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
Frame = +1
Query: 94 DSRSFASVAEAVSSTDLGETEXXXXXXXXXXXXXXXXXXCLFELKNSDIRRGKGKEGGVG 273
+ + FASVAEAVSSTD S I KG
Sbjct: 100 EMQGFASVAEAVSSTDED---------------------------TSAIEEIKGLVERFS 132
Query: 274 SEIKLNQQFQYAPR---KVAGMGAARHTALRRRQIKIETEAWEQAAKEYQELLMDM 432
E+ ++ ++ + K +G A++ AL+RRQIKIETEAWEQAAKEY+EL+MDM
Sbjct: 133 EEVFKEKEGEFRGKRRTKFGNLGYAKYNALKRRQIKIETEAWEQAAKEYKELMMDM 188
>gb|EXB44918.1| DNA-directed RNA polymerase 1 [Morus notabilis]
Length = 1023
Score = 65.9 bits (159), Expect = 6e-09
Identities = 31/48 (64%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
Frame = +1
Query: 292 QQFQYAPRK-VAGMGAARHTALRRRQIKIETEAWEQAAKEYQELLMDM 432
+ + AP++ VAGMG A++ LR+RQIKIETEAWEQAAKEY+EL++DM
Sbjct: 134 ETYSKAPKRTVAGMGTAKYQKLRKRQIKIETEAWEQAAKEYRELMVDM 181
>ref|XP_006484275.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
[Citrus sinensis]
Length = 980
Score = 65.1 bits (157), Expect = 9e-09
Identities = 48/120 (40%), Positives = 66/120 (55%), Gaps = 1/120 (0%)
Frame = +1
Query: 76 PYGLISDSRSFASVAEAVSS-TDLGETEXXXXXXXXXXXXXXXXXXCLFELKNSDIRRGK 252
P+G+++ SRS+AS AEA++S ++L +E F K I
Sbjct: 73 PFGVLT-SRSYASAAEAIASESELSGSEEVQELIDQ------------FNEKGVSI---- 115
Query: 253 GKEGGVGSEIKLNQQFQYAPRKVAGMGAARHTALRRRQIKIETEAWEQAAKEYQELLMDM 432
+ S L++Q +K GMG A++ L+RRQIKIETEAWEQAAKEYQ+LL DM
Sbjct: 116 -----LDSSSMLDKQ---PKKKGTGMGTAKYYMLKRRQIKIETEAWEQAAKEYQDLLADM 167
>ref|XP_006437832.1| hypothetical protein CICLE_v10030633mg [Citrus clementina]
gi|557540028|gb|ESR51072.1| hypothetical protein
CICLE_v10030633mg [Citrus clementina]
Length = 980
Score = 65.1 bits (157), Expect = 9e-09
Identities = 48/120 (40%), Positives = 66/120 (55%), Gaps = 1/120 (0%)
Frame = +1
Query: 76 PYGLISDSRSFASVAEAVSS-TDLGETEXXXXXXXXXXXXXXXXXXCLFELKNSDIRRGK 252
P+G+++ SRS+AS AEA++S ++L +E F K I
Sbjct: 73 PFGVLT-SRSYASAAEAIASESELSGSEEVQELIDQ------------FNEKGVSI---- 115
Query: 253 GKEGGVGSEIKLNQQFQYAPRKVAGMGAARHTALRRRQIKIETEAWEQAAKEYQELLMDM 432
+ S L++Q +K GMG A++ L+RRQIKIETEAWEQAAKEYQ+LL DM
Sbjct: 116 -----LDSSSMLDKQ---PKKKGTGMGTAKYYMLKRRQIKIETEAWEQAAKEYQDLLADM 167
>ref|XP_006384251.1| hypothetical protein POPTR_0004s11060g [Populus trichocarpa]
gi|550340797|gb|ERP62048.1| hypothetical protein
POPTR_0004s11060g [Populus trichocarpa]
Length = 475
Score = 65.1 bits (157), Expect = 9e-09
Identities = 46/111 (41%), Positives = 58/111 (52%)
Frame = +1
Query: 100 RSFASVAEAVSSTDLGETEXXXXXXXXXXXXXXXXXXCLFELKNSDIRRGKGKEGGVGSE 279
R + SVAEAVSSTD+ + L EL D R+ + KE
Sbjct: 131 RGYVSVAEAVSSTDVEDNVVVDEE--------------LQELLQ-DTRKEEEKEKDFRRR 175
Query: 280 IKLNQQFQYAPRKVAGMGAARHTALRRRQIKIETEAWEQAAKEYQELLMDM 432
+L+ GMG+ ++ ALRRRQ+KIE EAWEQAAKEY+ELL DM
Sbjct: 176 RRLHAN--------RGMGSGKYKALRRRQVKIEAEAWEQAAKEYKELLKDM 218