BLASTX nr result

ID: Zingiber23_contig00037604 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00037604
         (267 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004987312.1| PREDICTED: 60S ribosomal protein L18a-1-like...    61   1e-07
gb|ABR18279.1| unknown [Picea sitchensis]                              60   3e-07
gb|ABK23722.1| unknown [Picea sitchensis]                              60   3e-07
ref|XP_006656069.1| PREDICTED: 60S ribosomal protein L18a-like p...    56   6e-06
gb|AFW76725.1| hypothetical protein ZEAMMB73_624022 [Zea mays]         56   6e-06
ref|XP_002445081.1| hypothetical protein SORBIDRAFT_07g003840 [S...    55   7e-06

>ref|XP_004987312.1| PREDICTED: 60S ribosomal protein L18a-1-like [Setaria italica]
          Length = 156

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 27/49 (55%), Positives = 35/49 (71%)
 Frame = +3

Query: 3   SIPWYVGALLLLFVDQDYREKCGLVACSIAAGLAFLSVIINALNYYVFW 149
           +IPWY GA LL FV  D+REK GL+AC+IAA  A +S I+N +  + FW
Sbjct: 108 AIPWYAGAFLLFFVALDHREKPGLIACTIAAIFALVSFILNGIRMHPFW 156


>gb|ABR18279.1| unknown [Picea sitchensis]
          Length = 151

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 31/49 (63%), Positives = 36/49 (73%)
 Frame = +3

Query: 3   SIPWYVGALLLLFVDQDYREKCGLVACSIAAGLAFLSVIINALNYYVFW 149
           SIPWYVGA LLL V QDYREK GL+AC+IAA L+ ++VII A      W
Sbjct: 103 SIPWYVGAFLLLCVRQDYREKPGLLACTIAAILSAVAVIIGATKGADVW 151


>gb|ABK23722.1| unknown [Picea sitchensis]
          Length = 153

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 31/49 (63%), Positives = 36/49 (73%)
 Frame = +3

Query: 3   SIPWYVGALLLLFVDQDYREKCGLVACSIAAGLAFLSVIINALNYYVFW 149
           SIPWYVGA LLL V QDYREK GL+AC+IAA L+ ++VII A      W
Sbjct: 105 SIPWYVGAFLLLCVRQDYREKPGLLACTIAAILSAVAVIIGATKGANVW 153


>ref|XP_006656069.1| PREDICTED: 60S ribosomal protein L18a-like protein-like [Oryza
           brachyantha]
          Length = 155

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 22/49 (44%), Positives = 34/49 (69%)
 Frame = +3

Query: 3   SIPWYVGALLLLFVDQDYREKCGLVACSIAAGLAFLSVIINALNYYVFW 149
           ++PWY GA +L F+  D+REK GL+AC+IA  +A +  I+N +  + FW
Sbjct: 107 AMPWYAGAFILFFIALDHREKPGLIACTIAGIVAIVPFILNGIRMHPFW 155


>gb|AFW76725.1| hypothetical protein ZEAMMB73_624022 [Zea mays]
          Length = 161

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/49 (48%), Positives = 32/49 (65%)
 Frame = +3

Query: 3   SIPWYVGALLLLFVDQDYREKCGLVACSIAAGLAFLSVIINALNYYVFW 149
           +IPWY GA LL FV  D+REK GL+AC++A   A +  I+N +    FW
Sbjct: 113 AIPWYAGAFLLFFVALDHREKPGLIACTVAGIFALVPFILNGIRLNPFW 161


>ref|XP_002445081.1| hypothetical protein SORBIDRAFT_07g003840 [Sorghum bicolor]
           gi|241941431|gb|EES14576.1| hypothetical protein
           SORBIDRAFT_07g003840 [Sorghum bicolor]
          Length = 164

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 23/49 (46%), Positives = 33/49 (67%)
 Frame = +3

Query: 3   SIPWYVGALLLLFVDQDYREKCGLVACSIAAGLAFLSVIINALNYYVFW 149
           +IPWY GA LL FV  D+REK GL+AC++A   A +  I++ +  + FW
Sbjct: 116 AIPWYAGAFLLFFVALDHREKPGLIACTVAGIFALVPFILDGIRLHPFW 164


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