BLASTX nr result
ID: Zingiber23_contig00037595
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00037595
(347 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004970279.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 60 2e-07
gb|EMT01795.1| RING finger protein 126 [Aegilops tauschii] 59 5e-07
dbj|BAJ87106.1| predicted protein [Hordeum vulgare subsp. vulgare] 59 5e-07
ref|NP_001148878.1| LOC100282497 [Zea mays] gi|195622884|gb|ACG3... 59 5e-07
gb|ACF82310.1| unknown [Zea mays] gi|413952179|gb|AFW84828.1| pu... 59 5e-07
gb|ACG31916.1| RHC1A [Zea mays] 59 7e-07
ref|NP_001132755.1| LOC100194242 [Zea mays] gi|194695312|gb|ACF8... 59 7e-07
ref|NP_001050120.1| Os03g0351800 [Oryza sativa Japonica Group] g... 59 7e-07
ref|XP_006650082.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 59 9e-07
gb|EEC74065.1| hypothetical protein OsI_09075 [Oryza sativa Indi... 58 1e-06
ref|XP_002438034.1| hypothetical protein SORBIDRAFT_10g007000 [S... 58 1e-06
ref|XP_004136656.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 57 2e-06
gb|AFW76696.1| putative RING zinc finger domain superfamily prot... 57 2e-06
ref|XP_006351927.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 57 3e-06
ref|XP_003557912.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 57 3e-06
ref|XP_002441802.1| hypothetical protein SORBIDRAFT_08g002550 [S... 57 3e-06
gb|EXB44360.1| E3 ubiquitin-protein ligase RING1-like protein [M... 57 3e-06
gb|EOY07471.1| Zinc finger family protein, putative [Theobroma c... 57 3e-06
gb|AFW64340.1| putative RING zinc finger domain superfamily prot... 57 3e-06
gb|AFW64339.1| putative RING zinc finger domain superfamily prot... 57 3e-06
>ref|XP_004970279.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Setaria italica]
Length = 325
Score = 60.5 bits (145), Expect = 2e-07
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = -3
Query: 345 YHSDCIVPWLSLHNSCPICRAPLPSQSSGGA 253
YH+DCI+PWL HNSCP+CR PLPSQ SG A
Sbjct: 212 YHTDCIIPWLVQHNSCPVCRHPLPSQRSGNA 242
>gb|EMT01795.1| RING finger protein 126 [Aegilops tauschii]
Length = 266
Score = 59.3 bits (142), Expect = 5e-07
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = -3
Query: 345 YHSDCIVPWLSLHNSCPICRAPLPSQSSGGA 253
YHSDCI+PWL HNSCP+CR LP+QSS GA
Sbjct: 187 YHSDCILPWLEQHNSCPVCRYELPTQSSSGA 217
>dbj|BAJ87106.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 137
Score = 59.3 bits (142), Expect = 5e-07
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = -3
Query: 345 YHSDCIVPWLSLHNSCPICRAPLPSQSSGGA 253
YHSDCI+PWL HNSCP+CR LP+QSS GA
Sbjct: 58 YHSDCILPWLEQHNSCPVCRYELPTQSSSGA 88
>ref|NP_001148878.1| LOC100282497 [Zea mays] gi|195622884|gb|ACG33272.1| RHC1A [Zea
mays]
Length = 345
Score = 59.3 bits (142), Expect = 5e-07
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = -3
Query: 345 YHSDCIVPWLSLHNSCPICRAPLPSQSSGGA 253
YH+DCI+PWL HNSCP+CR PLPSQ SG +
Sbjct: 212 YHTDCIIPWLVQHNSCPVCRHPLPSQRSGSS 242
>gb|ACF82310.1| unknown [Zea mays] gi|413952179|gb|AFW84828.1| putative RING zinc
finger domain superfamily protein [Zea mays]
Length = 346
Score = 59.3 bits (142), Expect = 5e-07
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = -3
Query: 345 YHSDCIVPWLSLHNSCPICRAPLPSQSSGGA 253
YH+DCI+PWL HNSCP+CR PLPSQ SG +
Sbjct: 212 YHTDCIIPWLVQHNSCPVCRHPLPSQRSGSS 242
>gb|ACG31916.1| RHC1A [Zea mays]
Length = 305
Score = 58.9 bits (141), Expect = 7e-07
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = -3
Query: 345 YHSDCIVPWLSLHNSCPICRAPLPSQSSG 259
YH+DCI+PWL HNSCP+CR PLPSQ SG
Sbjct: 212 YHTDCIIPWLVQHNSCPVCRHPLPSQRSG 240
>ref|NP_001132755.1| LOC100194242 [Zea mays] gi|194695312|gb|ACF81740.1| unknown [Zea
mays] gi|223946859|gb|ACN27513.1| unknown [Zea mays]
gi|414880104|tpg|DAA57235.1| TPA: putative RING zinc
finger domain superfamily protein [Zea mays]
Length = 325
Score = 58.9 bits (141), Expect = 7e-07
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = -3
Query: 345 YHSDCIVPWLSLHNSCPICRAPLPSQSSG 259
YH+DCI+PWL HNSCP+CR PLPSQ SG
Sbjct: 212 YHTDCIIPWLVQHNSCPVCRHPLPSQRSG 240
>ref|NP_001050120.1| Os03g0351800 [Oryza sativa Japonica Group]
gi|108708145|gb|ABF95940.1| Zinc finger, C3HC4 type
family protein, expressed [Oryza sativa Japonica Group]
gi|113548591|dbj|BAF12034.1| Os03g0351800 [Oryza sativa
Japonica Group] gi|125586254|gb|EAZ26918.1| hypothetical
protein OsJ_10846 [Oryza sativa Japonica Group]
gi|215697791|dbj|BAG91984.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 283
Score = 58.9 bits (141), Expect = 7e-07
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = -3
Query: 345 YHSDCIVPWLSLHNSCPICRAPLPSQSSGGA 253
YHSDCIVPWL HNSCP+CR LP QSS GA
Sbjct: 209 YHSDCIVPWLEQHNSCPVCRYELPPQSSTGA 239
>ref|XP_006650082.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform X1 [Oryza
brachyantha] gi|573925058|ref|XP_006650083.1| PREDICTED:
E3 ubiquitin-protein ligase RING1-like isoform X2 [Oryza
brachyantha]
Length = 282
Score = 58.5 bits (140), Expect = 9e-07
Identities = 23/31 (74%), Positives = 25/31 (80%)
Frame = -3
Query: 345 YHSDCIVPWLSLHNSCPICRAPLPSQSSGGA 253
YHSDCIVPWL HNSCP+CR LP QS+ GA
Sbjct: 209 YHSDCIVPWLEQHNSCPVCRYELPPQSTAGA 239
>gb|EEC74065.1| hypothetical protein OsI_09075 [Oryza sativa Indica Group]
Length = 327
Score = 58.2 bits (139), Expect = 1e-06
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = -3
Query: 345 YHSDCIVPWLSLHNSCPICRAPLPSQSSGGA 253
YHSDCIVPWL LHNSCP+CR LPS ++ G+
Sbjct: 208 YHSDCIVPWLRLHNSCPVCRYQLPSSAAAGS 238
>ref|XP_002438034.1| hypothetical protein SORBIDRAFT_10g007000 [Sorghum bicolor]
gi|241916257|gb|EER89401.1| hypothetical protein
SORBIDRAFT_10g007000 [Sorghum bicolor]
Length = 334
Score = 57.8 bits (138), Expect = 1e-06
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = -3
Query: 345 YHSDCIVPWLSLHNSCPICRAPLPSQSSGGA 253
YH+DCIVPWL LHNSCP+CR LP Q + GA
Sbjct: 214 YHTDCIVPWLRLHNSCPVCRQELPQQPADGA 244
>ref|XP_004136656.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
gi|449529445|ref|XP_004171710.1| PREDICTED: E3
ubiquitin-protein ligase RING1-like [Cucumis sativus]
Length = 305
Score = 57.4 bits (137), Expect = 2e-06
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = -3
Query: 345 YHSDCIVPWLSLHNSCPICRAPLPSQSSGGA 253
YHSDCIVPWL HNSCP+CR LP+Q SG +
Sbjct: 204 YHSDCIVPWLVQHNSCPVCRQELPAQGSGSS 234
>gb|AFW76696.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 340
Score = 57.4 bits (137), Expect = 2e-06
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = -3
Query: 345 YHSDCIVPWLSLHNSCPICRAPLPSQSSGGA 253
YH+DCIVPWL LHNSCP+CR LP + GG+
Sbjct: 229 YHTDCIVPWLRLHNSCPVCRQELPQPADGGS 259
>ref|XP_006351927.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Solanum
tuberosum]
Length = 445
Score = 57.0 bits (136), Expect = 3e-06
Identities = 22/27 (81%), Positives = 23/27 (85%)
Frame = -3
Query: 345 YHSDCIVPWLSLHNSCPICRAPLPSQS 265
YHSDCIVPWL LHNSCP+CR PLP S
Sbjct: 248 YHSDCIVPWLRLHNSCPVCRNPLPVSS 274
>ref|XP_003557912.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Brachypodium
distachyon]
Length = 288
Score = 57.0 bits (136), Expect = 3e-06
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = -3
Query: 345 YHSDCIVPWLSLHNSCPICRAPLPSQSSGGA 253
YHSDCI+PWL HNSCP+CR LP+Q S GA
Sbjct: 209 YHSDCILPWLEQHNSCPVCRYELPTQGSTGA 239
>ref|XP_002441802.1| hypothetical protein SORBIDRAFT_08g002550 [Sorghum bicolor]
gi|241942495|gb|EES15640.1| hypothetical protein
SORBIDRAFT_08g002550 [Sorghum bicolor]
Length = 208
Score = 57.0 bits (136), Expect = 3e-06
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = -3
Query: 345 YHSDCIVPWLSLHNSCPICRAPLPSQSSGGA 253
YHS CIVPWL +HNSCPICR LPS+++G A
Sbjct: 135 YHSSCIVPWLEVHNSCPICRCRLPSENTGPA 165
>gb|EXB44360.1| E3 ubiquitin-protein ligase RING1-like protein [Morus notabilis]
Length = 341
Score = 56.6 bits (135), Expect = 3e-06
Identities = 22/29 (75%), Positives = 23/29 (79%)
Frame = -3
Query: 345 YHSDCIVPWLSLHNSCPICRAPLPSQSSG 259
YHSDCIVPWL LHNSCP+CR LP S G
Sbjct: 272 YHSDCIVPWLRLHNSCPVCRKELPVSSGG 300
>gb|EOY07471.1| Zinc finger family protein, putative [Theobroma cacao]
Length = 369
Score = 56.6 bits (135), Expect = 3e-06
Identities = 21/29 (72%), Positives = 26/29 (89%)
Frame = -3
Query: 345 YHSDCIVPWLSLHNSCPICRAPLPSQSSG 259
YHSDCI+PWLS+ NSCP+CR LP++SSG
Sbjct: 212 YHSDCILPWLSIRNSCPVCRHELPTESSG 240
>gb|AFW64340.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 318
Score = 56.6 bits (135), Expect = 3e-06
Identities = 22/31 (70%), Positives = 24/31 (77%)
Frame = -3
Query: 345 YHSDCIVPWLSLHNSCPICRAPLPSQSSGGA 253
YHSDCIVPWL LHNSCP+CR LP S G+
Sbjct: 214 YHSDCIVPWLRLHNSCPVCRYQLPRAGSNGS 244
>gb|AFW64339.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 323
Score = 56.6 bits (135), Expect = 3e-06
Identities = 22/31 (70%), Positives = 24/31 (77%)
Frame = -3
Query: 345 YHSDCIVPWLSLHNSCPICRAPLPSQSSGGA 253
YHSDCIVPWL LHNSCP+CR LP S G+
Sbjct: 214 YHSDCIVPWLRLHNSCPVCRYQLPRAGSNGS 244