BLASTX nr result
ID: Zingiber23_contig00037455
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00037455
(412 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ESW31570.1| hypothetical protein PHAVU_002G249000g [Phaseolus... 76 5e-12
ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containi... 74 2e-11
emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera] 74 2e-11
ref|XP_006596257.1| PREDICTED: pentatricopeptide repeat-containi... 72 6e-11
ref|XP_006580059.1| PREDICTED: pentatricopeptide repeat-containi... 71 2e-10
gb|EPS69874.1| hypothetical protein M569_04890 [Genlisea aurea] 70 3e-10
ref|XP_006281476.1| hypothetical protein CARUB_v10027560mg [Caps... 69 7e-10
gb|EXB68664.1| hypothetical protein L484_024678 [Morus notabilis] 68 1e-09
ref|XP_003588473.1| Pentatricopeptide repeat-containing protein ... 68 1e-09
ref|XP_002876719.1| pentatricopeptide repeat-containing protein ... 68 1e-09
gb|EMT07478.1| hypothetical protein F775_00276 [Aegilops tauschii] 67 2e-09
ref|XP_006643820.1| PREDICTED: pentatricopeptide repeat-containi... 67 3e-09
ref|XP_006350509.1| PREDICTED: pentatricopeptide repeat-containi... 67 3e-09
gb|EMJ01343.1| hypothetical protein PRUPE_ppa016963mg [Prunus pe... 67 3e-09
gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays] 67 3e-09
ref|NP_191896.2| RNA editing factor OTP86 [Arabidopsis thaliana]... 67 3e-09
sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-c... 67 3e-09
emb|CAB86438.1| putative protein [Arabidopsis thaliana] 67 3e-09
ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group] g... 66 4e-09
gb|EMT07476.1| hypothetical protein F775_15307 [Aegilops tauschii] 66 6e-09
>gb|ESW31570.1| hypothetical protein PHAVU_002G249000g [Phaseolus vulgaris]
Length = 810
Score = 75.9 bits (185), Expect = 5e-12
Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 5/101 (4%)
Frame = +3
Query: 57 GTCFIASEKTVGGTATRRLLWMGPLNPSAHKSSGHVYGEIE-----TQEDNEAWRKGLRK 221
G CFI +E T+G A +L+ + P NP + ++Y + Q G++K
Sbjct: 703 GGCFIHNEVTLGEIAAEKLIELEPNNPGNYVMLANLYASVGKWHYLAQTRQSMKDMGMKK 762
Query: 222 RPGCSWVGGRGNVHVFVCGDRSHPRTAEIYSLMNQITCEIR 344
PGCSW+ R +HVFV D++H RT +IYS++N +T IR
Sbjct: 763 SPGCSWIEDRDGIHVFVASDKTHKRTDDIYSILNSLTNLIR 803
>ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein At3g63370-like
[Vitis vinifera]
Length = 993
Score = 74.3 bits (181), Expect = 2e-11
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Frame = +3
Query: 57 GTCFIASEKTVGGTATRRLLWMGPLNPSAHKSSGHVYGEIETQEDNEAWR-----KGLRK 221
G C I S K +G A ++LL M P NP + +VY +D E R GL+K
Sbjct: 797 GACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYAAERRWKDVEEVRMRMKASGLKK 856
Query: 222 RPGCSWVGGRGNVHVFVCGDRSHPRTAEIYSLMNQIT 332
PGCSW+ VH F+ D+SHP++ EIYS ++QIT
Sbjct: 857 NPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQIT 893
>emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 74.3 bits (181), Expect = 2e-11
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Frame = +3
Query: 57 GTCFIASEKTVGGTATRRLLWMGPLNPSAHKSSGHVYGEIETQEDNEAWR-----KGLRK 221
G C I S K +G A ++LL M P NP + +VY +D E R GL+K
Sbjct: 761 GACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYSAERRWKDVEXVRMRMKASGLKK 820
Query: 222 RPGCSWVGGRGNVHVFVCGDRSHPRTAEIYSLMNQIT 332
PGCSW+ VH F+ D+SHP++ EIYS ++QIT
Sbjct: 821 NPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQIT 857
>ref|XP_006596257.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like
[Glycine max]
Length = 845
Score = 72.4 bits (176), Expect = 6e-11
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 5/101 (4%)
Frame = +3
Query: 57 GTCFIASEKTVGGTATRRLLWMGPLNPSAHKSSGHVYGEIE-----TQEDNEAWRKGLRK 221
G CFI +E +G A +L+ + P NP + ++Y TQ G++K
Sbjct: 738 GGCFIHNEVDLGEIAAEKLIELEPNNPGNYVMLANLYASAGKWHYLTQTRQLMKDMGMQK 797
Query: 222 RPGCSWVGGRGNVHVFVCGDRSHPRTAEIYSLMNQITCEIR 344
RPGCSW+ R +HVFV D++H R +IYS++N +T IR
Sbjct: 798 RPGCSWIEDRDGIHVFVASDKTHKRIDDIYSILNNLTNLIR 838
>ref|XP_006580059.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 742
Score = 70.9 bits (172), Expect = 2e-10
Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 5/100 (5%)
Frame = +3
Query: 57 GTCFIASEKTVGGTATRRLLWMGPLNPSAHKSSGHVYGEIETQEDNEAWR-----KGLRK 221
G C I T+G TA +++L P +PS + ++Y E +D R +G++K
Sbjct: 643 GACRIHGNPTLGETAAQKILSARPQHPSTYVLLSNMYIESGLYKDGVNLRDTMKERGIKK 702
Query: 222 RPGCSWVGGRGNVHVFVCGDRSHPRTAEIYSLMNQITCEI 341
PG SWV RG VH F GD+ HP+T +IY+++ ++T I
Sbjct: 703 EPGYSWVSVRGEVHKFYAGDQMHPQTDKIYAMLEELTSNI 742
>gb|EPS69874.1| hypothetical protein M569_04890 [Genlisea aurea]
Length = 922
Score = 70.1 bits (170), Expect = 3e-10
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Frame = +3
Query: 57 GTCFIASEKTVGGTATRRLLWMGPLNPSAHKSSGHVYGEIETQEDNEAWR-----KGLRK 221
G C I S+ +G A ++LL P +P + ++Y ED E R KGLRK
Sbjct: 726 GACRIHSDMEIGEIAAKKLLESDPHDPGHYVLVSNLYAAAGRWEDVERVRSLMKSKGLRK 785
Query: 222 RPGCSWVGGRGNVHVFVCGDRSHPRTAEIYSLMNQITCEIRNS 350
PGCSW+ H FV DRSHP+ IY +++IT E+ +
Sbjct: 786 DPGCSWIEIGNKFHSFVVNDRSHPKCDAIYGKLSEITAEVERA 828
>ref|XP_006281476.1| hypothetical protein CARUB_v10027560mg [Capsella rubella]
gi|482550180|gb|EOA14374.1| hypothetical protein
CARUB_v10027560mg [Capsella rubella]
Length = 943
Score = 68.9 bits (167), Expect = 7e-10
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Frame = +3
Query: 63 CFIASEKTVGGTATRRLLWMGPLNPSAHKSSGHVYGEIETQEDNEAWRKGLR-----KRP 227
C SEK +G A +RLL + P+NP +V+ E +D E R+ ++ K P
Sbjct: 749 CRSHSEKEIGAIAAQRLLELEPMNPGNLVLVSNVFAEQGRWDDVERVREKMKASRLEKHP 808
Query: 228 GCSWVGGRGNVHVFVCGDRSHPRTAEIYSLMNQIT 332
GCSW+ G VH F D+SHP T EIY ++++T
Sbjct: 809 GCSWIEIDGKVHKFTARDKSHPETKEIYEKLSEVT 843
>gb|EXB68664.1| hypothetical protein L484_024678 [Morus notabilis]
Length = 728
Score = 68.2 bits (165), Expect = 1e-09
Identities = 32/102 (31%), Positives = 56/102 (54%), Gaps = 5/102 (4%)
Frame = +3
Query: 60 TCFIASEKTVGGTATRRLLWMGPLNPSAHKSSGHVYGEIETQEDNEAWR-----KGLRKR 224
+C + + ++G A +L + P NP + ++YG + R KGLRK
Sbjct: 534 SCRVHNNVSLGEVAAEKLFELEPRNPGNYVILSNIYGSKGMWSQVDRVRDMMNQKGLRKN 593
Query: 225 PGCSWVGGRGNVHVFVCGDRSHPRTAEIYSLMNQITCEIRNS 350
PGCSW+ + VH+ + GD+SHP+ +I +N+++ E++NS
Sbjct: 594 PGCSWIEVKNEVHMLLAGDKSHPQRIQIIGKLNKLSMEMKNS 635
>ref|XP_003588473.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477521|gb|AES58724.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 827
Score = 68.2 bits (165), Expect = 1e-09
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Frame = +3
Query: 57 GTCFIASEKTVGGTATRRLLWMGPLNPSAHKSSGHVYGEIETQEDNEAWR-----KGLRK 221
G CFI E +G A +L+ + P N + ++Y D R KG++K
Sbjct: 718 GGCFIHKEVALGEIAAEKLIELEPSNTGNYVLLANLYASAGRWHDLAKTRELMNDKGMQK 777
Query: 222 RPGCSWVGGRGNVHVFVCGDRSHPRTAEIYSLMNQITCEIR 344
PGCSW+ R VH+F+ D+SH R EIY +++ +T IR
Sbjct: 778 SPGCSWIEDRDGVHIFLASDKSHQRVEEIYFMLDNLTKFIR 818
>ref|XP_002876719.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297322557|gb|EFH52978.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1005
Score = 68.2 bits (165), Expect = 1e-09
Identities = 37/95 (38%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Frame = +3
Query: 63 CFIASEKTVGGTATRRLLWMGPLNPSAHKSSGHVYGEIETQEDNEAWR-----KGLRKRP 227
C SEK +G A +RLL + P NP +V+ E D E R G+ K P
Sbjct: 745 CRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHP 804
Query: 228 GCSWVGGRGNVHVFVCGDRSHPRTAEIYSLMNQIT 332
GCSW+ G VH F D+SHP T EIY ++++T
Sbjct: 805 GCSWIEMDGKVHKFTARDKSHPETKEIYEKLSEVT 839
>gb|EMT07478.1| hypothetical protein F775_00276 [Aegilops tauschii]
Length = 689
Score = 67.0 bits (162), Expect = 2e-09
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 5/100 (5%)
Frame = +3
Query: 63 CFIASEKTVGGTATRRLLWMGPLNPSAHKSSGHVYGEIETQEDNEAWR-----KGLRKRP 227
C + +G A RLL + P N A+ ++Y + D R KG++K P
Sbjct: 435 CRVHGNSEIGELAAERLLELDPENSMAYVLLSNLYAKSNRWGDVRWLRQVMMEKGIKKEP 494
Query: 228 GCSWVGGRGNVHVFVCGDRSHPRTAEIYSLMNQITCEIRN 347
GCS + G +H FV GDRSHP + EIYS ++++ +++N
Sbjct: 495 GCSLIEMNGTIHEFVAGDRSHPMSEEIYSKLDKVLTDLKN 534
>ref|XP_006643820.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Oryza brachyantha]
Length = 659
Score = 66.6 bits (161), Expect = 3e-09
Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 8/123 (6%)
Frame = +3
Query: 63 CFIASEKTVGGTATRRLLWMGPLNPSAHKSSGHVYGEIETQEDNEAWR-----KGLRKRP 227
C I +G A LL + P N +A+ ++Y + ED + R KG++K P
Sbjct: 466 CRIHGNSEIGELAAEHLLELDPYNSTAYILLSNMYAKSNRWEDVQRIRQAIMEKGIKKEP 525
Query: 228 GCSWVGGRGNVHVFVCGDRSHPRTAEIYSLMNQITCEIRNSW---DD*QCFTSIVKENLY 398
GCS + G ++ FV DRSHP + EIYS + ++ ++RN+ D + F + +E
Sbjct: 526 GCSMIEINGMIYEFVAADRSHPMSKEIYSKLEKVLTDLRNAGYVPDVTEVFVEVTEEEKQ 585
Query: 399 VII 407
+I
Sbjct: 586 KVI 588
>ref|XP_006350509.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like
[Solanum tuberosum]
Length = 851
Score = 66.6 bits (161), Expect = 3e-09
Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Frame = +3
Query: 57 GTCFIASEKTVGGTATRRLLWMGPLNPSAHKSSGHVYGEIETQEDNEAWR-----KGLRK 221
G C I VG A +L+ + P N H ++Y + D R + + K
Sbjct: 748 GGCVIHGNLEVGEIAANKLIKLEPGNTGNHVMVANLYASVGRWGDLAKIRQLINERKMHK 807
Query: 222 RPGCSWVGGRGNVHVFVCGDRSHPRTAEIYSLMNQITCEIR 344
PGCSW+ +G +HVFV D SH +T EIY ++N +T +IR
Sbjct: 808 NPGCSWLEDKGEIHVFVACDTSHKKTDEIYEMLNILTSQIR 848
>gb|EMJ01343.1| hypothetical protein PRUPE_ppa016963mg [Prunus persica]
Length = 818
Score = 66.6 bits (161), Expect = 3e-09
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Frame = +3
Query: 57 GTCFIASEKTVGGTATRRLLWMGPLNPSAHKSSGHVYGEIETQEDNEAWRK-----GLRK 221
G C + S K +G A +++L +G NP + +++ +D E R GL+K
Sbjct: 622 GACRVHSNKELGEIAAKKILELGTENPGNYVLVSNMFAASRRWKDVEEVRMRMKGIGLKK 681
Query: 222 RPGCSWVGGRGNVHVFVCGDRSHPRTAEIYSLMNQITCEIRNSWD 356
PGCSW+ VH+F D+SHP++ EIY + Q+T ++ D
Sbjct: 682 NPGCSWIEIGNKVHIFTARDKSHPQSNEIYQKLAQMTEKLEREVD 726
>gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 66.6 bits (161), Expect = 3e-09
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Frame = +3
Query: 63 CFIASEKTVGGTATRRLLWMGPLNPSAHKSSGHVYGEIETQEDNEAWR-----KGLRKRP 227
C + +G T RLL M P N + + ++Y + ED R KG++K P
Sbjct: 456 CRVHGNSEIGELVTERLLQMDPENSTVYTLLSNIYAKCNRWEDVRRLRHTIMEKGIKKEP 515
Query: 228 GCSWVGGRGNVHVFVCGDRSHPRTAEIYSLMNQITCEIRN 347
GCS + G +H FV GD+SHP + EIY + I ++ N
Sbjct: 516 GCSLIEMNGIIHEFVAGDQSHPMSKEIYCKLESIINDLNN 555
>ref|NP_191896.2| RNA editing factor OTP86 [Arabidopsis thaliana]
gi|332646951|gb|AEE80472.1| RNA editing factor OTP86
[Arabidopsis thaliana]
Length = 884
Score = 66.6 bits (161), Expect = 3e-09
Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Frame = +3
Query: 63 CFIASEKTVGGTATRRLLWMGPLNPSAHKSSGHVYGEIETQEDNEAWR-----KGLRKRP 227
C SEK +G A +RLL + P NP +V+ E D E R G+ K P
Sbjct: 766 CRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHP 825
Query: 228 GCSWVGGRGNVHVFVCGDRSHPRTAEIYSLMNQIT 332
GCSW+ G VH F D+SHP + EIY ++++T
Sbjct: 826 GCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVT 860
>sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
Length = 960
Score = 66.6 bits (161), Expect = 3e-09
Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Frame = +3
Query: 63 CFIASEKTVGGTATRRLLWMGPLNPSAHKSSGHVYGEIETQEDNEAWR-----KGLRKRP 227
C SEK +G A +RLL + P NP +V+ E D E R G+ K P
Sbjct: 766 CRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHP 825
Query: 228 GCSWVGGRGNVHVFVCGDRSHPRTAEIYSLMNQIT 332
GCSW+ G VH F D+SHP + EIY ++++T
Sbjct: 826 GCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVT 860
>emb|CAB86438.1| putative protein [Arabidopsis thaliana]
Length = 1017
Score = 66.6 bits (161), Expect = 3e-09
Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Frame = +3
Query: 63 CFIASEKTVGGTATRRLLWMGPLNPSAHKSSGHVYGEIETQEDNEAWR-----KGLRKRP 227
C SEK +G A +RLL + P NP +V+ E D E R G+ K P
Sbjct: 729 CRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHP 788
Query: 228 GCSWVGGRGNVHVFVCGDRSHPRTAEIYSLMNQIT 332
GCSW+ G VH F D+SHP + EIY ++++T
Sbjct: 789 GCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVT 823
>ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza
sativa Japonica Group] gi|113531711|dbj|BAF04094.1|
Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein
OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 66.2 bits (160), Expect = 4e-09
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Frame = +3
Query: 60 TCFIASEKTVGGTATRRLLWMGPLNPSAHKSSGHVYGEIETQEDNEAWR-----KGLRKR 224
+C + +G A RLL + P N +A+ ++Y + +D R KG++K
Sbjct: 471 SCRVYGNSEIGELAAERLLELDPDNSTAYILLSNMYAKSNRWKDVRRIRQIIMEKGIKKE 530
Query: 225 PGCSWVGGRGNVHVFVCGDRSHPRTAEIYSLMNQITCEIRNS 350
PGCS + G +H FV DRSHP EIYS + + ++RN+
Sbjct: 531 PGCSMIEMNGIIHEFVAADRSHPMNKEIYSKLENVLTDLRNA 572
>gb|EMT07476.1| hypothetical protein F775_15307 [Aegilops tauschii]
Length = 696
Score = 65.9 bits (159), Expect = 6e-09
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Frame = +3
Query: 63 CFIASEKTVGGTATRRLLWMGPLNPSAHKSSGHVYGEIETQEDNEAWR-----KGLRKRP 227
C + +G A RLL + P N A+ ++Y + D R KG++K P
Sbjct: 503 CRVHGNSEIGELAAERLLELEPENSMAYVLLSNLYAKSNRWGDVRWLRQLMMEKGIKKEP 562
Query: 228 GCSWVGGRGNVHVFVCGDRSHPRTAEIYSLMNQITCEIRN 347
GCS + G +H FV GDRSHP + EIYS ++ + +++N
Sbjct: 563 GCSLIEMNGTIHEFVAGDRSHPMSEEIYSKLDMLLMDLKN 602