BLASTX nr result
ID: Zingiber23_contig00037392
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00037392
(516 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004170646.1| PREDICTED: replication protein A 70 kDa DNA-... 70 4e-10
ref|XP_004146122.1| PREDICTED: replication protein A 70 kDa DNA-... 70 4e-10
ref|XP_006432556.1| hypothetical protein CICLE_v10000254mg [Citr... 69 6e-10
ref|XP_002304377.2| hypothetical protein POPTR_0003s10170g [Popu... 69 8e-10
gb|ESW30149.1| hypothetical protein PHAVU_002G128800g [Phaseolus... 68 1e-09
gb|EMJ12292.1| hypothetical protein PRUPE_ppa001396mg [Prunus pe... 67 2e-09
emb|CBI37456.3| unnamed protein product [Vitis vinifera] 67 2e-09
ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-... 67 2e-09
emb|CAN82475.1| hypothetical protein VITISV_038295 [Vitis vinifera] 67 2e-09
ref|XP_004245920.1| PREDICTED: replication protein A 70 kDa DNA-... 66 5e-09
ref|XP_006364465.1| PREDICTED: replication protein A 70 kDa DNA-... 65 7e-09
ref|NP_001151792.1| DNA binding protein [Zea mays] gi|195649707|... 64 2e-08
gb|EEC78388.1| hypothetical protein OsI_18166 [Oryza sativa Indi... 62 6e-08
ref|XP_004301636.1| PREDICTED: replication protein A 70 kDa DNA-... 62 8e-08
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub... 62 8e-08
gb|EOY25325.1| Replication factor A 1, rfa1, putative [Theobroma... 61 2e-07
ref|XP_004512401.1| PREDICTED: replication protein A 70 kDa DNA-... 60 2e-07
ref|XP_006854186.1| hypothetical protein AMTR_s00048p00204000 [A... 60 3e-07
gb|EMT33605.1| Replication protein A 70 kDa DNA-binding subunit ... 60 3e-07
gb|EMS59946.1| Replication protein A 70 kDa DNA-binding subunit ... 60 3e-07
>ref|XP_004170646.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
partial [Cucumis sativus]
Length = 425
Score = 69.7 bits (169), Expect = 4e-10
Identities = 32/61 (52%), Positives = 35/61 (57%), Gaps = 8/61 (13%)
Frame = -3
Query: 466 CNNCGGHGHSFQNCPIGTSRPAQSVSGGY--------SSAGSNVCFKCHQPGHWASECPS 311
CN+CGG GHS NCP S PA SV GG S S CFKCHQ GHWA +CP
Sbjct: 350 CNSCGGSGHSSTNCPSIMSGPALSVGGGMYSNQASGPSGGTSGECFKCHQTGHWARDCPG 409
Query: 310 V 308
+
Sbjct: 410 L 410
>ref|XP_004146122.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Cucumis sativus]
Length = 861
Score = 69.7 bits (169), Expect = 4e-10
Identities = 32/61 (52%), Positives = 35/61 (57%), Gaps = 8/61 (13%)
Frame = -3
Query: 466 CNNCGGHGHSFQNCPIGTSRPAQSVSGGY--------SSAGSNVCFKCHQPGHWASECPS 311
CN+CGG GHS NCP S PA SV GG S S CFKCHQ GHWA +CP
Sbjct: 786 CNSCGGSGHSSTNCPSIMSGPALSVGGGMYSNQASGPSGGTSGECFKCHQTGHWARDCPG 845
Query: 310 V 308
+
Sbjct: 846 L 846
>ref|XP_006432556.1| hypothetical protein CICLE_v10000254mg [Citrus clementina]
gi|568834454|ref|XP_006471343.1| PREDICTED: replication
protein A 70 kDa DNA-binding subunit C-like [Citrus
sinensis] gi|557534678|gb|ESR45796.1| hypothetical
protein CICLE_v10000254mg [Citrus clementina]
Length = 858
Score = 68.9 bits (167), Expect = 6e-10
Identities = 30/65 (46%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = -3
Query: 478 AQLQCNNCGGHGHSFQNCPIGTSRPAQSVSGGYSS--------AGSNVCFKCHQPGHWAS 323
A+ C++CG GHS NCP S P QS GGY++ A S+ C+KCH+ GHWA
Sbjct: 764 ARQSCSSCGAVGHSSMNCPSIMSGPGQSSGGGYANSFSSGAGIAASSECYKCHKTGHWAR 823
Query: 322 ECPSV 308
+CPS+
Sbjct: 824 DCPSL 828
>ref|XP_002304377.2| hypothetical protein POPTR_0003s10170g [Populus trichocarpa]
gi|550342884|gb|EEE79356.2| hypothetical protein
POPTR_0003s10170g [Populus trichocarpa]
Length = 854
Score = 68.6 bits (166), Expect = 8e-10
Identities = 29/65 (44%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Frame = -3
Query: 490 SRNEAQLQCNNCGGHGHSFQNCPIGTSRPAQSVSGGY----SSAGSNVCFKCHQPGHWAS 323
S + A CN+CG HS NCP + P QS+ G Y S G+ C+KCHQ GHWA
Sbjct: 773 SSSGAYRSCNSCGATSHSSANCPSMVNAPGQSMGGSYANRTSQGGTGECYKCHQVGHWAR 832
Query: 322 ECPSV 308
+CP +
Sbjct: 833 DCPGL 837
>gb|ESW30149.1| hypothetical protein PHAVU_002G128800g [Phaseolus vulgaris]
Length = 866
Score = 68.2 bits (165), Expect = 1e-09
Identities = 30/64 (46%), Positives = 35/64 (54%), Gaps = 9/64 (14%)
Frame = -3
Query: 478 AQLQCNNCGGHGHSFQNCPIGTSRPAQSVSGGYSS---------AGSNVCFKCHQPGHWA 326
A C NCGG GH+ CP + P QS GG+S+ S CFKCHQPGHWA
Sbjct: 773 AYTSCTNCGGSGHTSMLCPNIRNLPGQSSGGGFSNRASYGGSGGGASGECFKCHQPGHWA 832
Query: 325 SECP 314
+CP
Sbjct: 833 RDCP 836
>gb|EMJ12292.1| hypothetical protein PRUPE_ppa001396mg [Prunus persica]
Length = 838
Score = 67.4 bits (163), Expect = 2e-09
Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 9/64 (14%)
Frame = -3
Query: 472 LQCNNCGGHGHSFQNCPIGTSRPAQSVSGGYSSAGSNV---------CFKCHQPGHWASE 320
L CN+CG GHS NCP + P QS GY++ S+ C+KCHQPGHWA +
Sbjct: 748 LSCNSCGDAGHSSMNCPSVMNGPGQSSGAGYNNRVSSRPGVGNTSGDCYKCHQPGHWARD 807
Query: 319 CPSV 308
CP +
Sbjct: 808 CPGL 811
>emb|CBI37456.3| unnamed protein product [Vitis vinifera]
Length = 754
Score = 67.0 bits (162), Expect = 2e-09
Identities = 30/62 (48%), Positives = 34/62 (54%), Gaps = 9/62 (14%)
Frame = -3
Query: 466 CNNCGGHGHSFQNCPIGTSRPAQSVSGGYSSAGS---------NVCFKCHQPGHWASECP 314
CN+CGG GHS NCP P QS GGY S S C+KCHQ GHWA +CP
Sbjct: 614 CNSCGGTGHSSSNCPSVMHSPRQSSGGGYVSRASTGPSAGGTTGECYKCHQFGHWARDCP 673
Query: 313 SV 308
+
Sbjct: 674 GL 675
>ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Vitis vinifera]
Length = 882
Score = 67.0 bits (162), Expect = 2e-09
Identities = 30/62 (48%), Positives = 34/62 (54%), Gaps = 9/62 (14%)
Frame = -3
Query: 466 CNNCGGHGHSFQNCPIGTSRPAQSVSGGYSSAGS---------NVCFKCHQPGHWASECP 314
CN+CGG GHS NCP P QS GGY S S C+KCHQ GHWA +CP
Sbjct: 793 CNSCGGTGHSSSNCPSVMHSPRQSSGGGYVSRASTGPSAGGTTGECYKCHQFGHWARDCP 852
Query: 313 SV 308
+
Sbjct: 853 GL 854
>emb|CAN82475.1| hypothetical protein VITISV_038295 [Vitis vinifera]
Length = 882
Score = 67.0 bits (162), Expect = 2e-09
Identities = 30/62 (48%), Positives = 34/62 (54%), Gaps = 9/62 (14%)
Frame = -3
Query: 466 CNNCGGHGHSFQNCPIGTSRPAQSVSGGYSSAGS---------NVCFKCHQPGHWASECP 314
CN+CGG GHS NCP P QS GGY S S C+KCHQ GHWA +CP
Sbjct: 793 CNSCGGTGHSSSNCPSVMHSPRQSSGGGYVSRASTGPSAGGTTGECYKCHQFGHWARDCP 852
Query: 313 SV 308
+
Sbjct: 853 GL 854
>ref|XP_004245920.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Solanum lycopersicum]
Length = 899
Score = 65.9 bits (159), Expect = 5e-09
Identities = 28/64 (43%), Positives = 35/64 (54%), Gaps = 9/64 (14%)
Frame = -3
Query: 472 LQCNNCGGHGHSFQNCPIGTSRPAQSVSGGY---------SSAGSNVCFKCHQPGHWASE 320
+ CN+CGG GHS NCP S +Q+ G+ S G C+KCHQ GHWA +
Sbjct: 811 MSCNSCGGTGHSASNCPSMMSGQSQAYGSGFGNRATSGMSSGGGGGECYKCHQYGHWARD 870
Query: 319 CPSV 308
CP V
Sbjct: 871 CPGV 874
>ref|XP_006364465.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit C-like
[Solanum tuberosum]
Length = 905
Score = 65.5 bits (158), Expect = 7e-09
Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 13/68 (19%)
Frame = -3
Query: 472 LQCNNCGGHGHSFQNCPIGTSRPAQSVSGGYSS-------------AGSNVCFKCHQPGH 332
+ CN+CGG GHS NCP S +Q+ GG+ + G C+KCHQ GH
Sbjct: 813 MSCNSCGGTGHSASNCPSMMSGQSQAYGGGFGNRATSGMSSGGGGGGGGGECYKCHQYGH 872
Query: 331 WASECPSV 308
WA +CP V
Sbjct: 873 WARDCPGV 880
>ref|NP_001151792.1| DNA binding protein [Zea mays] gi|195649707|gb|ACG44321.1| DNA
binding protein [Zea mays] gi|223945267|gb|ACN26717.1|
unknown [Zea mays] gi|413942327|gb|AFW74976.1| DNA
binding protein [Zea mays]
Length = 876
Score = 64.3 bits (155), Expect = 2e-08
Identities = 32/71 (45%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Frame = -3
Query: 514 GGTIKQSFSRNEAQLQCNNCGGHGHSFQNCPIGTSRPAQSVSG----GYSSAGSNVCFKC 347
G T S +RN Q C +CG GH+ QNCP GT R + S G S + +CFKC
Sbjct: 773 GVTTPVSAARN-VQQTCVSCGSSGHNVQNCPAGTYRQQAAASAASSYGTSQPRNGLCFKC 831
Query: 346 HQPGHWASECP 314
+QPGH+A+ CP
Sbjct: 832 NQPGHFANSCP 842
>gb|EEC78388.1| hypothetical protein OsI_18166 [Oryza sativa Indica Group]
Length = 988
Score = 62.4 bits (150), Expect = 6e-08
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 9/60 (15%)
Frame = -3
Query: 466 CNNCGGHGHSFQNCPIGTSRPAQSVSGGYSSA---------GSNVCFKCHQPGHWASECP 314
CN CG +GHS QNC +G Q S G SS GS+ C+KC QPGH+A +CP
Sbjct: 853 CNICGANGHSAQNCHVGADMDMQETSAGGSSMGNYNSIAGNGSSECYKCKQPGHYARDCP 912
>ref|XP_004301636.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Fragaria vesca subsp. vesca]
Length = 874
Score = 62.0 bits (149), Expect = 8e-08
Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Frame = -3
Query: 472 LQCNNCGGHGHSFQNCPIGTSRPAQSVSGGYSSA-----GSNVCFKCHQPGHWASECP 314
L CN CGG H+ NCP + QS G Y+++ S C+KCHQPGHWAS+CP
Sbjct: 793 LSCNICGGTSHNSLNCP---NVMKQSSGGSYANSRPVASNSGECYKCHQPGHWASDCP 847
>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula] gi|355513943|gb|AES95566.1| Replication
protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
Length = 1723
Score = 62.0 bits (149), Expect = 8e-08
Identities = 27/61 (44%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Frame = -3
Query: 472 LQCNNCGGHGHSFQNCPIGTSRPAQSVSGGY------SSAGSNVCFKCHQPGHWASECPS 311
+ C+NCGG HS C + P Q+ G Y S S C+KC QPGHWAS CPS
Sbjct: 783 MSCSNCGGSDHSSAQCLHLRNPPEQTAGGAYVNTVSGSGGASGKCYKCQQPGHWASNCPS 842
Query: 310 V 308
+
Sbjct: 843 M 843
Score = 55.8 bits (133), Expect = 6e-06
Identities = 25/54 (46%), Positives = 32/54 (59%)
Frame = -3
Query: 469 QCNNCGGHGHSFQNCPIGTSRPAQSVSGGYSSAGSNVCFKCHQPGHWASECPSV 308
+C C GH NCP + A VSGG A N C+KC+QPGHWA+ CP++
Sbjct: 826 KCYKCQQPGHWASNCP--SMSAANRVSGGSGGASGN-CYKCNQPGHWANNCPNM 876
>gb|EOY25325.1| Replication factor A 1, rfa1, putative [Theobroma cacao]
Length = 911
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/60 (48%), Positives = 36/60 (60%), Gaps = 9/60 (15%)
Frame = -3
Query: 466 CNNCGGHGHSFQNCPIGTSRPAQSV----SGGYSSAGS-----NVCFKCHQPGHWASECP 314
CN+CG GHS NCP + PAQS+ +G SS S + C+KCHQ GHWA +CP
Sbjct: 825 CNSCGVTGHSSTNCPTFMNGPAQSMGRDCTGRISSEASVGRTSDECYKCHQSGHWAKDCP 884
>ref|XP_004512401.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Cicer arietinum]
Length = 917
Score = 60.5 bits (145), Expect = 2e-07
Identities = 26/62 (41%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Frame = -3
Query: 472 LQCNNCGGHGHSFQNCPIGTSRPAQSVSGGY-------SSAGSNVCFKCHQPGHWASECP 314
+ C+NCG GHS C ++ QS Y S A S C+KCHQPGHWA +CP
Sbjct: 786 VSCSNCGASGHSSAQCLNLRNQSGQSTGAAYGNRVSAGSGAASGDCYKCHQPGHWARDCP 845
Query: 313 SV 308
+
Sbjct: 846 GM 847
>ref|XP_006854186.1| hypothetical protein AMTR_s00048p00204000 [Amborella trichopoda]
gi|548857855|gb|ERN15653.1| hypothetical protein
AMTR_s00048p00204000 [Amborella trichopoda]
Length = 798
Score = 60.1 bits (144), Expect = 3e-07
Identities = 27/62 (43%), Positives = 33/62 (53%)
Frame = -3
Query: 493 FSRNEAQLQCNNCGGHGHSFQNCPIGTSRPAQSVSGGYSSAGSNVCFKCHQPGHWASECP 314
F+ A L C CGG GH+ NCP ++ GG S+ CFKC Q GHWA +CP
Sbjct: 716 FNGGNASLNCYKCGGVGHNSVNCPRNRLSNSEQSFGG----SSDQCFKCKQSGHWAKDCP 771
Query: 313 SV 308
V
Sbjct: 772 GV 773
>gb|EMT33605.1| Replication protein A 70 kDa DNA-binding subunit [Aegilops
tauschii]
Length = 877
Score = 60.1 bits (144), Expect = 3e-07
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 9/60 (15%)
Frame = -3
Query: 466 CNNCGGHGHSFQNCPIGTSRPAQSVSGGYSS---------AGSNVCFKCHQPGHWASECP 314
C+ CG GHS QNCP Q + GY++ AGS +CFKC+QPGH++ +CP
Sbjct: 684 CSVCGSTGHSVQNCPAVAMDMQQPAASGYAASSYGSSPGDAGSGLCFKCNQPGHFSRDCP 743
>gb|EMS59946.1| Replication protein A 70 kDa DNA-binding subunit [Triticum urartu]
Length = 1001
Score = 60.1 bits (144), Expect = 3e-07
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 9/60 (15%)
Frame = -3
Query: 466 CNNCGGHGHSFQNCPIGTSRPAQSVSGGYSS---------AGSNVCFKCHQPGHWASECP 314
C+ CG GHS QNCP Q + GY++ AGS +CFKC+QPGH++ +CP
Sbjct: 808 CSVCGSTGHSVQNCPAVAMDMQQPAASGYAASSYGSSPGDAGSGLCFKCNQPGHFSRDCP 867