BLASTX nr result
ID: Zingiber23_contig00037358
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00037358
(244 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006654589.1| PREDICTED: transcription elongation factor S... 111 1e-22
ref|XP_004961640.1| PREDICTED: transcription elongation factor S... 111 1e-22
gb|EEE64215.1| hypothetical protein OsJ_19048 [Oryza sativa Japo... 111 1e-22
gb|EAY98543.1| hypothetical protein OsI_20456 [Oryza sativa Indi... 111 1e-22
gb|EMT25860.1| Transcription elongation factor SPT6 [Aegilops ta... 110 1e-22
gb|EMS61141.1| Transcription elongation factor SPT6 [Triticum ur... 110 1e-22
gb|AFW78515.1| hypothetical protein ZEAMMB73_763456 [Zea mays] 108 7e-22
gb|AFW78513.1| hypothetical protein ZEAMMB73_763456 [Zea mays] 108 7e-22
ref|XP_002440004.1| hypothetical protein SORBIDRAFT_09g024270 [S... 107 1e-21
ref|XP_003566091.1| PREDICTED: transcription elongation factor S... 100 3e-19
ref|XP_006482016.1| PREDICTED: transcription elongation factor S... 98 1e-18
ref|XP_006430480.1| hypothetical protein CICLE_v10013566mg, part... 98 1e-18
ref|XP_004309652.1| PREDICTED: transcription elongation factor S... 97 2e-18
gb|EXC30727.1| Transcription elongation factor SPT6 [Morus notab... 96 4e-18
gb|EOY19522.1| Global transcription factor group B1 isoform 2 [T... 96 5e-18
gb|EOY19521.1| Global transcription factor group B1 isoform 1 [T... 96 5e-18
ref|XP_006300644.1| hypothetical protein CARUB_v10019652mg [Caps... 95 8e-18
gb|AAC27151.1| Similar to gb|U46691 putative chromatin structure... 95 1e-17
ref|NP_176723.3| transcription elongation factor SPT6-like prote... 95 1e-17
ref|NP_001185317.1| transcription elongation factor SPT6-like pr... 95 1e-17
>ref|XP_006654589.1| PREDICTED: transcription elongation factor SPT6-like [Oryza
brachyantha]
Length = 1633
Score = 111 bits (277), Expect = 1e-22
Identities = 53/82 (64%), Positives = 70/82 (85%), Gaps = 2/82 (2%)
Frame = +3
Query: 3 EEFAMLSGETDDTIPEGKIVQVTVRHVQESQVICVFDSGLKGMVSSDDFSDEGFDYE--K 176
EEF MLSGET+DTI +G+IVQVTVR +Q++++IC FDSGLK +V +D++SDEGFD E +
Sbjct: 1127 EEFWMLSGETEDTISDGRIVQVTVRSIQDNRIICTFDSGLKAIVMADNYSDEGFDLETLQ 1186
Query: 177 VHVGDILTCKIKHVNKNRHVVY 242
+H GD+LT KIK+VNKNR +VY
Sbjct: 1187 LHEGDVLTGKIKNVNKNRFMVY 1208
>ref|XP_004961640.1| PREDICTED: transcription elongation factor SPT6-like [Setaria
italica]
Length = 1653
Score = 111 bits (277), Expect = 1e-22
Identities = 53/82 (64%), Positives = 71/82 (86%), Gaps = 2/82 (2%)
Frame = +3
Query: 3 EEFAMLSGETDDTIPEGKIVQVTVRHVQESQVICVFDSGLKGMVSSDDFSDEGFDYE--K 176
EEF MLSGET+DTI EG+IVQVTVR++QE+++IC FDSGLK +V +D++SD+GFD E +
Sbjct: 1108 EEFWMLSGETEDTISEGRIVQVTVRNIQENKIICTFDSGLKAIVMADNYSDQGFDPESSQ 1167
Query: 177 VHVGDILTCKIKHVNKNRHVVY 242
+H GD+LT KI++VNKNR +VY
Sbjct: 1168 LHEGDVLTGKIRNVNKNRFMVY 1189
>gb|EEE64215.1| hypothetical protein OsJ_19048 [Oryza sativa Japonica Group]
Length = 1637
Score = 111 bits (277), Expect = 1e-22
Identities = 53/82 (64%), Positives = 70/82 (85%), Gaps = 2/82 (2%)
Frame = +3
Query: 3 EEFAMLSGETDDTIPEGKIVQVTVRHVQESQVICVFDSGLKGMVSSDDFSDEGFDYE--K 176
EEF MLSGET+DTI +G+IVQVTVR +Q++++IC FDSGLK +V +D++SDEGFD E +
Sbjct: 1121 EEFWMLSGETEDTISDGRIVQVTVRSIQDNRIICTFDSGLKAIVMADNYSDEGFDLETLQ 1180
Query: 177 VHVGDILTCKIKHVNKNRHVVY 242
+H GD+LT KIK+VNKNR +VY
Sbjct: 1181 LHEGDVLTGKIKNVNKNRFMVY 1202
>gb|EAY98543.1| hypothetical protein OsI_20456 [Oryza sativa Indica Group]
Length = 1627
Score = 111 bits (277), Expect = 1e-22
Identities = 53/82 (64%), Positives = 70/82 (85%), Gaps = 2/82 (2%)
Frame = +3
Query: 3 EEFAMLSGETDDTIPEGKIVQVTVRHVQESQVICVFDSGLKGMVSSDDFSDEGFDYE--K 176
EEF MLSGET+DTI +G+IVQVTVR +Q++++IC FDSGLK +V +D++SDEGFD E +
Sbjct: 1121 EEFWMLSGETEDTISDGRIVQVTVRSIQDNRIICTFDSGLKAIVMADNYSDEGFDLETLQ 1180
Query: 177 VHVGDILTCKIKHVNKNRHVVY 242
+H GD+LT KIK+VNKNR +VY
Sbjct: 1181 LHEGDVLTGKIKNVNKNRFMVY 1202
>gb|EMT25860.1| Transcription elongation factor SPT6 [Aegilops tauschii]
Length = 1561
Score = 110 bits (276), Expect = 1e-22
Identities = 51/82 (62%), Positives = 69/82 (84%), Gaps = 2/82 (2%)
Frame = +3
Query: 3 EEFAMLSGETDDTIPEGKIVQVTVRHVQESQVICVFDSGLKGMVSSDDFSDEGFDYE--K 176
EEF +LSGET+D I +G+IVQVTVRH+Q++++IC FDSGLK +V D++SD+GFD E +
Sbjct: 1047 EEFWLLSGETEDNISDGRIVQVTVRHIQDNRIICTFDSGLKAIVMGDNYSDDGFDLESLQ 1106
Query: 177 VHVGDILTCKIKHVNKNRHVVY 242
+H GD+LT KIK+VNKNR +VY
Sbjct: 1107 LHEGDVLTGKIKNVNKNRFIVY 1128
>gb|EMS61141.1| Transcription elongation factor SPT6 [Triticum urartu]
Length = 1650
Score = 110 bits (276), Expect = 1e-22
Identities = 51/82 (62%), Positives = 69/82 (84%), Gaps = 2/82 (2%)
Frame = +3
Query: 3 EEFAMLSGETDDTIPEGKIVQVTVRHVQESQVICVFDSGLKGMVSSDDFSDEGFDYE--K 176
EEF +LSGET+D I +G+IVQVTVRH+Q++++IC FDSGLK +V D++SD+GFD E +
Sbjct: 1137 EEFWLLSGETEDNISDGRIVQVTVRHIQDNRIICTFDSGLKAIVMGDNYSDDGFDLESLQ 1196
Query: 177 VHVGDILTCKIKHVNKNRHVVY 242
+H GD+LT KIK+VNKNR +VY
Sbjct: 1197 LHEGDVLTGKIKNVNKNRFIVY 1218
>gb|AFW78515.1| hypothetical protein ZEAMMB73_763456 [Zea mays]
Length = 1621
Score = 108 bits (270), Expect = 7e-22
Identities = 52/82 (63%), Positives = 70/82 (85%), Gaps = 2/82 (2%)
Frame = +3
Query: 3 EEFAMLSGETDDTIPEGKIVQVTVRHVQESQVICVFDSGLKGMVSSDDFSDEGFDYE--K 176
EEF +LSGETDDTI EG+IVQVTVR++Q++++IC FDSGLK +V +D++SDEGFD E +
Sbjct: 1112 EEFWLLSGETDDTISEGRIVQVTVRNIQDNKIICTFDSGLKAIVMADNYSDEGFDPESSQ 1171
Query: 177 VHVGDILTCKIKHVNKNRHVVY 242
+ GD+LT KI++VNKNR +VY
Sbjct: 1172 LREGDVLTGKIRNVNKNRFMVY 1193
>gb|AFW78513.1| hypothetical protein ZEAMMB73_763456 [Zea mays]
Length = 1622
Score = 108 bits (270), Expect = 7e-22
Identities = 52/82 (63%), Positives = 70/82 (85%), Gaps = 2/82 (2%)
Frame = +3
Query: 3 EEFAMLSGETDDTIPEGKIVQVTVRHVQESQVICVFDSGLKGMVSSDDFSDEGFDYE--K 176
EEF +LSGETDDTI EG+IVQVTVR++Q++++IC FDSGLK +V +D++SDEGFD E +
Sbjct: 1113 EEFWLLSGETDDTISEGRIVQVTVRNIQDNKIICTFDSGLKAIVMADNYSDEGFDPESSQ 1172
Query: 177 VHVGDILTCKIKHVNKNRHVVY 242
+ GD+LT KI++VNKNR +VY
Sbjct: 1173 LREGDVLTGKIRNVNKNRFMVY 1194
>ref|XP_002440004.1| hypothetical protein SORBIDRAFT_09g024270 [Sorghum bicolor]
gi|241945289|gb|EES18434.1| hypothetical protein
SORBIDRAFT_09g024270 [Sorghum bicolor]
Length = 1687
Score = 107 bits (268), Expect = 1e-21
Identities = 51/82 (62%), Positives = 70/82 (85%), Gaps = 2/82 (2%)
Frame = +3
Query: 3 EEFAMLSGETDDTIPEGKIVQVTVRHVQESQVICVFDSGLKGMVSSDDFSDEGFDYE--K 176
+EF MLSGET+DTI +G+IVQVTVR++QE+++IC FDSGLK +V +D++SDEGFD E +
Sbjct: 1162 DEFWMLSGETEDTISDGRIVQVTVRNIQENKIICTFDSGLKAIVMADNYSDEGFDLESSQ 1221
Query: 177 VHVGDILTCKIKHVNKNRHVVY 242
+ GD+LT KI++VNKNR +VY
Sbjct: 1222 LREGDVLTGKIRNVNKNRFMVY 1243
>ref|XP_003566091.1| PREDICTED: transcription elongation factor SPT6-like [Brachypodium
distachyon]
Length = 1585
Score = 100 bits (248), Expect = 3e-19
Identities = 49/83 (59%), Positives = 67/83 (80%), Gaps = 3/83 (3%)
Frame = +3
Query: 3 EEFAMLSGETDDTIPEGKIVQVTVRHVQESQVICVFDSGLKGMVSSDDFSDE-GFDYE-- 173
EEF +LSGET+D I +G+ VQVTVR++QE+++IC FDSGLK +V D++SD+ FD E
Sbjct: 1102 EEFWLLSGETEDNISDGRTVQVTVRNIQENRIICTFDSGLKAIVMGDNYSDDVAFDAESL 1161
Query: 174 KVHVGDILTCKIKHVNKNRHVVY 242
++H GD+LT KIK+VNKNR +VY
Sbjct: 1162 QLHEGDVLTGKIKNVNKNRFIVY 1184
>ref|XP_006482016.1| PREDICTED: transcription elongation factor SPT6-like [Citrus
sinensis]
Length = 1623
Score = 98.2 bits (243), Expect = 1e-18
Identities = 47/83 (56%), Positives = 62/83 (74%), Gaps = 3/83 (3%)
Frame = +3
Query: 3 EEFAMLSGETDDTIPEGKIVQVTVRHVQESQVICVFDSGLKGMVSSDDFSDEGFDYE--- 173
EEF M+SGET+DT+ EG++VQ TVR VQ + ICV +SGL GM+ +D+SD+ D E
Sbjct: 1111 EEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSD 1170
Query: 174 KVHVGDILTCKIKHVNKNRHVVY 242
K+H GDILTCKIK + KNR+ V+
Sbjct: 1171 KLHEGDILTCKIKSIQKNRYQVF 1193
>ref|XP_006430480.1| hypothetical protein CICLE_v10013566mg, partial [Citrus clementina]
gi|557532537|gb|ESR43720.1| hypothetical protein
CICLE_v10013566mg, partial [Citrus clementina]
Length = 1592
Score = 98.2 bits (243), Expect = 1e-18
Identities = 47/83 (56%), Positives = 62/83 (74%), Gaps = 3/83 (3%)
Frame = +3
Query: 3 EEFAMLSGETDDTIPEGKIVQVTVRHVQESQVICVFDSGLKGMVSSDDFSDEGFDYE--- 173
EEF M+SGET+DT+ EG++VQ TVR VQ + ICV +SGL GM+ +D+SD+ D E
Sbjct: 1079 EEFYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSD 1138
Query: 174 KVHVGDILTCKIKHVNKNRHVVY 242
K+H GDILTCKIK + KNR+ V+
Sbjct: 1139 KLHEGDILTCKIKSIQKNRYQVF 1161
>ref|XP_004309652.1| PREDICTED: transcription elongation factor SPT6-like [Fragaria vesca
subsp. vesca]
Length = 1620
Score = 97.4 bits (241), Expect = 2e-18
Identities = 46/84 (54%), Positives = 63/84 (75%), Gaps = 4/84 (4%)
Frame = +3
Query: 3 EEFAMLSGETDDTIPEGKIVQVTVRHVQESQVICVFDSGLKGMVSSDDFSDEGFDY---- 170
EEF M+SGET+DT+ EG+IVQ TVR VQ + IC +SGL GM++ +DFSD+ D
Sbjct: 1091 EEFYMISGETEDTLAEGRIVQATVRRVQAQKAICALESGLTGMLTKEDFSDDSRDISDLS 1150
Query: 171 EKVHVGDILTCKIKHVNKNRHVVY 242
E+++ GDILTCKIK + KNR++V+
Sbjct: 1151 ERLNEGDILTCKIKSIQKNRYLVF 1174
>gb|EXC30727.1| Transcription elongation factor SPT6 [Morus notabilis]
Length = 1638
Score = 96.3 bits (238), Expect = 4e-18
Identities = 46/84 (54%), Positives = 61/84 (72%), Gaps = 4/84 (4%)
Frame = +3
Query: 3 EEFAMLSGETDDTIPEGKIVQVTVRHVQESQVICVFDSGLKGMVSSDDFSDEGFDY---- 170
EEF M+SGET+DTI EG+IVQ TVR Q + ICV DSGL GM+ +D++D+ D
Sbjct: 1100 EEFYMISGETEDTIAEGRIVQATVRRAQAQKAICVLDSGLTGMLMKEDYTDDWKDISELS 1159
Query: 171 EKVHVGDILTCKIKHVNKNRHVVY 242
+++H GDILTCKIK + KNR+ V+
Sbjct: 1160 DRLHEGDILTCKIKSIQKNRYQVF 1183
>gb|EOY19522.1| Global transcription factor group B1 isoform 2 [Theobroma cacao]
Length = 1382
Score = 95.9 bits (237), Expect = 5e-18
Identities = 45/84 (53%), Positives = 62/84 (73%), Gaps = 4/84 (4%)
Frame = +3
Query: 3 EEFAMLSGETDDTIPEGKIVQVTVRHVQESQVICVFDSGLKGMVSSDDFSDEGFDY---- 170
EEF M+SGET+DT+ EG+IVQ TVR VQ + ICV +SGL GM+ +D++D+ D
Sbjct: 922 EEFFMISGETEDTLTEGRIVQATVRRVQGGRAICVLESGLTGMIMKEDYADDWRDIIELS 981
Query: 171 EKVHVGDILTCKIKHVNKNRHVVY 242
+++H GDILTCKIK + KNR+ V+
Sbjct: 982 DRLHEGDILTCKIKSIQKNRYQVF 1005
>gb|EOY19521.1| Global transcription factor group B1 isoform 1 [Theobroma cacao]
Length = 1617
Score = 95.9 bits (237), Expect = 5e-18
Identities = 45/84 (53%), Positives = 62/84 (73%), Gaps = 4/84 (4%)
Frame = +3
Query: 3 EEFAMLSGETDDTIPEGKIVQVTVRHVQESQVICVFDSGLKGMVSSDDFSDEGFDY---- 170
EEF M+SGET+DT+ EG+IVQ TVR VQ + ICV +SGL GM+ +D++D+ D
Sbjct: 1098 EEFFMISGETEDTLTEGRIVQATVRRVQGGRAICVLESGLTGMIMKEDYADDWRDIIELS 1157
Query: 171 EKVHVGDILTCKIKHVNKNRHVVY 242
+++H GDILTCKIK + KNR+ V+
Sbjct: 1158 DRLHEGDILTCKIKSIQKNRYQVF 1181
>ref|XP_006300644.1| hypothetical protein CARUB_v10019652mg [Capsella rubella]
gi|482569354|gb|EOA33542.1| hypothetical protein
CARUB_v10019652mg [Capsella rubella]
Length = 1309
Score = 95.1 bits (235), Expect = 8e-18
Identities = 46/84 (54%), Positives = 62/84 (73%), Gaps = 4/84 (4%)
Frame = +3
Query: 3 EEFAMLSGETDDTIPEGKIVQVTVRHVQESQVICVFDSGLKGMVSSDDFSDEGFDY---- 170
EEF M+SGET+DTI EG+IVQ +VR +Q + ICV DSGL GM++ +DFSD+G D
Sbjct: 743 EEFYMISGETEDTIAEGRIVQASVRRLQGGRAICVLDSGLTGMLTKEDFSDDGRDIVELS 802
Query: 171 EKVHVGDILTCKIKHVNKNRHVVY 242
+++ GDILTCKIK + K R+ V+
Sbjct: 803 DRLKEGDILTCKIKSIQKERYQVF 826
>gb|AAC27151.1| Similar to gb|U46691 putative chromatin structure regulator (SUPT6H)
from Homo sapiens. ESTs gb|T42908, gb|AA586170 and
gb|AA395125 come from this gene [Arabidopsis thaliana]
Length = 1684
Score = 94.7 bits (234), Expect = 1e-17
Identities = 46/84 (54%), Positives = 61/84 (72%), Gaps = 4/84 (4%)
Frame = +3
Query: 3 EEFAMLSGETDDTIPEGKIVQVTVRHVQESQVICVFDSGLKGMVSSDDFSDEGFDY---- 170
EEF M+SGET+DTI EG+IVQ +VR +Q + ICV DSGL GM+ +DFSD+G D
Sbjct: 1124 EEFYMISGETEDTIAEGRIVQASVRRLQNGRAICVLDSGLTGMLMKEDFSDDGRDIVDLA 1183
Query: 171 EKVHVGDILTCKIKHVNKNRHVVY 242
+++ GDILTCKIK + K R+ V+
Sbjct: 1184 DQLKEGDILTCKIKSIQKQRYQVF 1207
>ref|NP_176723.3| transcription elongation factor SPT6-like protein [Arabidopsis
thaliana] gi|332196252|gb|AEE34373.1| transcription
elongation factor SPT6-like protein [Arabidopsis
thaliana]
Length = 1647
Score = 94.7 bits (234), Expect = 1e-17
Identities = 46/84 (54%), Positives = 61/84 (72%), Gaps = 4/84 (4%)
Frame = +3
Query: 3 EEFAMLSGETDDTIPEGKIVQVTVRHVQESQVICVFDSGLKGMVSSDDFSDEGFDY---- 170
EEF M+SGET+DTI EG+IVQ +VR +Q + ICV DSGL GM+ +DFSD+G D
Sbjct: 1087 EEFYMISGETEDTIAEGRIVQASVRRLQNGRAICVLDSGLTGMLMKEDFSDDGRDIVDLA 1146
Query: 171 EKVHVGDILTCKIKHVNKNRHVVY 242
+++ GDILTCKIK + K R+ V+
Sbjct: 1147 DQLKEGDILTCKIKSIQKQRYQVF 1170
>ref|NP_001185317.1| transcription elongation factor SPT6-like protein [Arabidopsis
thaliana] gi|332196254|gb|AEE34375.1| transcription
elongation factor SPT6-like protein [Arabidopsis
thaliana]
Length = 1454
Score = 94.7 bits (234), Expect = 1e-17
Identities = 46/84 (54%), Positives = 61/84 (72%), Gaps = 4/84 (4%)
Frame = +3
Query: 3 EEFAMLSGETDDTIPEGKIVQVTVRHVQESQVICVFDSGLKGMVSSDDFSDEGFDY---- 170
EEF M+SGET+DTI EG+IVQ +VR +Q + ICV DSGL GM+ +DFSD+G D
Sbjct: 1058 EEFYMISGETEDTIAEGRIVQASVRRLQNGRAICVLDSGLTGMLMKEDFSDDGRDIVDLA 1117
Query: 171 EKVHVGDILTCKIKHVNKNRHVVY 242
+++ GDILTCKIK + K R+ V+
Sbjct: 1118 DQLKEGDILTCKIKSIQKQRYQVF 1141