BLASTX nr result
ID: Zingiber23_contig00037338
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00037338
(424 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006369513.1| hypothetical protein POPTR_0001s24310g [Popu... 97 2e-18
ref|XP_006369512.1| hypothetical protein POPTR_0001s24310g [Popu... 97 2e-18
ref|XP_004295934.1| PREDICTED: glycine-rich RNA-binding protein ... 92 5e-17
gb|EXB52246.1| Glycine-rich RNA-binding protein 2 [Morus notabilis] 92 7e-17
ref|XP_006488272.1| PREDICTED: glycine-rich RNA-binding protein ... 90 3e-16
ref|XP_006424767.1| hypothetical protein CICLE_v10029787mg [Citr... 90 3e-16
gb|EOY34118.1| Glycine-rich RNA-binding protein 2 [Theobroma cacao] 88 1e-15
gb|EEC72267.1| hypothetical protein OsI_05421 [Oryza sativa Indi... 87 2e-15
ref|NP_001045556.2| Os01g0974600 [Oryza sativa Japonica Group] g... 87 2e-15
dbj|BAD87838.1| hypothetical protein [Oryza sativa Japonica Group] 87 2e-15
ref|XP_004962753.1| PREDICTED: glycine-rich RNA-binding protein ... 86 5e-15
ref|XP_004962752.1| PREDICTED: glycine-rich RNA-binding protein ... 86 5e-15
ref|XP_006488273.1| PREDICTED: glycine-rich RNA-binding protein ... 86 7e-15
ref|XP_006584645.1| PREDICTED: 40S ribosomal protein S19, mitoch... 85 9e-15
ref|XP_003531992.2| PREDICTED: 40S ribosomal protein S19, mitoch... 85 9e-15
gb|EMJ09112.1| hypothetical protein PRUPE_ppa019460mg [Prunus pe... 85 9e-15
ref|NP_001236472.1| uncharacterized protein LOC100306540 [Glycin... 85 9e-15
gb|ACF74325.1| unknown [Arachis hypogaea] 85 9e-15
ref|XP_003565182.1| PREDICTED: glycine-rich RNA-binding protein ... 85 1e-14
ref|XP_002862718.1| hypothetical protein ARALYDRAFT_359421 [Arab... 85 1e-14
>ref|XP_006369513.1| hypothetical protein POPTR_0001s24310g [Populus trichocarpa]
gi|550348076|gb|ERP66082.1| hypothetical protein
POPTR_0001s24310g [Populus trichocarpa]
Length = 91
Score = 97.1 bits (240), Expect = 2e-18
Identities = 48/72 (66%), Positives = 60/72 (83%), Gaps = 1/72 (1%)
Frame = -1
Query: 214 SQAFSFP-ARRLLVRFTSSKLFIGGLSFDTNETALRDAFAEHGEIIEVKVICDRMTSKSK 38
+++ S P ARRLL R S+KLF+GGLS+DTNET L+DAF ++GEIIEVKVIC R+ +SK
Sbjct: 5 NRSVSLPLARRLLARHLSTKLFVGGLSYDTNETVLKDAFGKYGEIIEVKVICHRVYGESK 64
Query: 37 GYGFVQFSSQEA 2
GYGFVQFSS+ A
Sbjct: 65 GYGFVQFSSEAA 76
>ref|XP_006369512.1| hypothetical protein POPTR_0001s24310g [Populus trichocarpa]
gi|550348075|gb|ERP66081.1| hypothetical protein
POPTR_0001s24310g [Populus trichocarpa]
Length = 103
Score = 97.1 bits (240), Expect = 2e-18
Identities = 48/72 (66%), Positives = 60/72 (83%), Gaps = 1/72 (1%)
Frame = -1
Query: 214 SQAFSFP-ARRLLVRFTSSKLFIGGLSFDTNETALRDAFAEHGEIIEVKVICDRMTSKSK 38
+++ S P ARRLL R S+KLF+GGLS+DTNET L+DAF ++GEIIEVKVIC R+ +SK
Sbjct: 5 NRSVSLPLARRLLARHLSTKLFVGGLSYDTNETVLKDAFGKYGEIIEVKVICHRVYGESK 64
Query: 37 GYGFVQFSSQEA 2
GYGFVQFSS+ A
Sbjct: 65 GYGFVQFSSEAA 76
>ref|XP_004295934.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Fragaria vesca subsp. vesca]
Length = 108
Score = 92.4 bits (228), Expect = 5e-17
Identities = 42/66 (63%), Positives = 55/66 (83%)
Frame = -1
Query: 205 FSFPARRLLVRFTSSKLFIGGLSFDTNETALRDAFAEHGEIIEVKVICDRMTSKSKGYGF 26
+S AR+ R +S+KLF+GGLS+DTNE L+DAF +HGEIIEVKVICD ++ KSKGYGF
Sbjct: 15 WSILARKSWARLSSTKLFVGGLSYDTNEPVLKDAFGKHGEIIEVKVICDHVSGKSKGYGF 74
Query: 25 VQFSSQ 8
V+F+S+
Sbjct: 75 VKFTSE 80
>gb|EXB52246.1| Glycine-rich RNA-binding protein 2 [Morus notabilis]
Length = 119
Score = 92.0 bits (227), Expect = 7e-17
Identities = 43/68 (63%), Positives = 56/68 (82%), Gaps = 1/68 (1%)
Frame = -1
Query: 202 SFPARRLL-VRFTSSKLFIGGLSFDTNETALRDAFAEHGEIIEVKVICDRMTSKSKGYGF 26
+FP R+L R +S+KLF+GGLS+DTNET L+D F +HG+IIEVKVICD + +SKGYGF
Sbjct: 13 TFPLARILWARPSSTKLFVGGLSYDTNETVLKDVFEQHGDIIEVKVICDHKSGRSKGYGF 72
Query: 25 VQFSSQEA 2
VQF+S+ A
Sbjct: 73 VQFTSETA 80
>ref|XP_006488272.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
isoform X1 [Citrus sinensis]
Length = 114
Score = 90.1 bits (222), Expect = 3e-16
Identities = 40/54 (74%), Positives = 50/54 (92%)
Frame = -1
Query: 163 SKLFIGGLSFDTNETALRDAFAEHGEIIEVKVICDRMTSKSKGYGFVQFSSQEA 2
+KLFIGGLS+DTNET L+DAF +HGEIIEVKVICDR+T +S+GYGFV+F+S+ A
Sbjct: 27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAA 80
>ref|XP_006424767.1| hypothetical protein CICLE_v10029787mg [Citrus clementina]
gi|568870157|ref|XP_006488276.1| PREDICTED: glycine-rich
RNA-binding protein 2, mitochondrial-like isoform X5
[Citrus sinensis] gi|557526701|gb|ESR38007.1|
hypothetical protein CICLE_v10029787mg [Citrus
clementina]
Length = 106
Score = 90.1 bits (222), Expect = 3e-16
Identities = 40/54 (74%), Positives = 50/54 (92%)
Frame = -1
Query: 163 SKLFIGGLSFDTNETALRDAFAEHGEIIEVKVICDRMTSKSKGYGFVQFSSQEA 2
+KLFIGGLS+DTNET L+DAF +HGEIIEVKVICDR+T +S+GYGFV+F+S+ A
Sbjct: 27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAA 80
>gb|EOY34118.1| Glycine-rich RNA-binding protein 2 [Theobroma cacao]
Length = 106
Score = 87.8 bits (216), Expect = 1e-15
Identities = 41/64 (64%), Positives = 53/64 (82%)
Frame = -1
Query: 193 ARRLLVRFTSSKLFIGGLSFDTNETALRDAFAEHGEIIEVKVICDRMTSKSKGYGFVQFS 14
A L VR + SKLF+GGLS+DTNET L+DAF +HGEIIEV+VIC ++ KS+GYGFV+F+
Sbjct: 17 AGSLSVRNSCSKLFVGGLSYDTNETVLKDAFEKHGEIIEVRVICHHVSGKSRGYGFVRFA 76
Query: 13 SQEA 2
S+ A
Sbjct: 77 SEAA 80
>gb|EEC72267.1| hypothetical protein OsI_05421 [Oryza sativa Indica Group]
Length = 116
Score = 87.0 bits (214), Expect = 2e-15
Identities = 39/53 (73%), Positives = 49/53 (92%)
Frame = -1
Query: 163 SKLFIGGLSFDTNETALRDAFAEHGEIIEVKVICDRMTSKSKGYGFVQFSSQE 5
SKLFIGGLS+DTNETAL+DAF++HG II+VKVIC +T KSKGYGFV+F+S++
Sbjct: 37 SKLFIGGLSYDTNETALKDAFSQHGHIIQVKVICHPVTGKSKGYGFVKFASED 89
>ref|NP_001045556.2| Os01g0974600 [Oryza sativa Japonica Group]
gi|215768629|dbj|BAH00858.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|222619969|gb|EEE56101.1| hypothetical protein
OsJ_04953 [Oryza sativa Japonica Group]
gi|255674125|dbj|BAF07470.2| Os01g0974600 [Oryza sativa
Japonica Group]
Length = 116
Score = 87.0 bits (214), Expect = 2e-15
Identities = 39/53 (73%), Positives = 49/53 (92%)
Frame = -1
Query: 163 SKLFIGGLSFDTNETALRDAFAEHGEIIEVKVICDRMTSKSKGYGFVQFSSQE 5
SKLFIGGLS+DTNETAL+DAF++HG II+VKVIC +T KSKGYGFV+F+S++
Sbjct: 37 SKLFIGGLSYDTNETALKDAFSQHGHIIQVKVICHPVTGKSKGYGFVKFASED 89
>dbj|BAD87838.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 203
Score = 87.0 bits (214), Expect = 2e-15
Identities = 39/53 (73%), Positives = 49/53 (92%)
Frame = -1
Query: 163 SKLFIGGLSFDTNETALRDAFAEHGEIIEVKVICDRMTSKSKGYGFVQFSSQE 5
SKLFIGGLS+DTNETAL+DAF++HG II+VKVIC +T KSKGYGFV+F+S++
Sbjct: 124 SKLFIGGLSYDTNETALKDAFSQHGHIIQVKVICHPVTGKSKGYGFVKFASED 176
>ref|XP_004962753.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
isoform X2 [Setaria italica]
Length = 97
Score = 85.9 bits (211), Expect = 5e-15
Identities = 44/83 (53%), Positives = 59/83 (71%)
Frame = -1
Query: 253 GKQKMRRSMLRDFSQAFSFPARRLLVRFTSSKLFIGGLSFDTNETALRDAFAEHGEIIEV 74
G+ M R+ + F + F+ A R + KLFIGGLS+DTNETAL+DAF++HG++I V
Sbjct: 5 GRGGMLRNAVTPFGKLFNRNAACSCAR--TPKLFIGGLSYDTNETALKDAFSQHGDVIAV 62
Query: 73 KVICDRMTSKSKGYGFVQFSSQE 5
KVIC T KSKG+GFV FSS++
Sbjct: 63 KVICHPTTGKSKGFGFVTFSSED 85
>ref|XP_004962752.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
isoform X1 [Setaria italica]
Length = 121
Score = 85.9 bits (211), Expect = 5e-15
Identities = 44/83 (53%), Positives = 59/83 (71%)
Frame = -1
Query: 253 GKQKMRRSMLRDFSQAFSFPARRLLVRFTSSKLFIGGLSFDTNETALRDAFAEHGEIIEV 74
G+ M R+ + F + F+ A R + KLFIGGLS+DTNETAL+DAF++HG++I V
Sbjct: 5 GRGGMLRNAVTPFGKLFNRNAACSCAR--TPKLFIGGLSYDTNETALKDAFSQHGDVIAV 62
Query: 73 KVICDRMTSKSKGYGFVQFSSQE 5
KVIC T KSKG+GFV FSS++
Sbjct: 63 KVICHPTTGKSKGFGFVTFSSED 85
>ref|XP_006488273.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
isoform X2 [Citrus sinensis]
gi|568870153|ref|XP_006488274.1| PREDICTED: glycine-rich
RNA-binding protein 2, mitochondrial-like isoform X3
[Citrus sinensis] gi|568870155|ref|XP_006488275.1|
PREDICTED: glycine-rich RNA-binding protein 2,
mitochondrial-like isoform X4 [Citrus sinensis]
Length = 107
Score = 85.5 bits (210), Expect = 7e-15
Identities = 40/55 (72%), Positives = 50/55 (90%), Gaps = 1/55 (1%)
Frame = -1
Query: 163 SKLFIGGLSFDTNETALRDAFAEHGEIIE-VKVICDRMTSKSKGYGFVQFSSQEA 2
+KLFIGGLS+DTNET L+DAF +HGEIIE VKVICDR+T +S+GYGFV+F+S+ A
Sbjct: 27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEAVKVICDRVTGQSRGYGFVKFASEAA 81
>ref|XP_006584645.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like isoform X2
[Glycine max]
Length = 239
Score = 85.1 bits (209), Expect = 9e-15
Identities = 43/62 (69%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Frame = -1
Query: 190 RRLLVRFTSS-KLFIGGLSFDTNETALRDAFAEHGEIIEVKVICDRMTSKSKGYGFVQFS 14
R L VR SS KLF+ GLS+DTNE LRDAF +HGEIIEVKVICD +T KS+GYGFV+F
Sbjct: 48 RFLYVRHHSSIKLFVTGLSYDTNEPVLRDAFGQHGEIIEVKVICDHVTGKSRGYGFVRFL 107
Query: 13 SQ 8
S+
Sbjct: 108 SE 109
>ref|XP_003531992.2| PREDICTED: 40S ribosomal protein S19, mitochondrial-like isoform X1
[Glycine max]
Length = 263
Score = 85.1 bits (209), Expect = 9e-15
Identities = 43/62 (69%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Frame = -1
Query: 190 RRLLVRFTSS-KLFIGGLSFDTNETALRDAFAEHGEIIEVKVICDRMTSKSKGYGFVQFS 14
R L VR SS KLF+ GLS+DTNE LRDAF +HGEIIEVKVICD +T KS+GYGFV+F
Sbjct: 48 RFLYVRHHSSIKLFVTGLSYDTNEPVLRDAFGQHGEIIEVKVICDHVTGKSRGYGFVRFL 107
Query: 13 SQ 8
S+
Sbjct: 108 SE 109
>gb|EMJ09112.1| hypothetical protein PRUPE_ppa019460mg [Prunus persica]
Length = 106
Score = 85.1 bits (209), Expect = 9e-15
Identities = 38/60 (63%), Positives = 49/60 (81%)
Frame = -1
Query: 190 RRLLVRFTSSKLFIGGLSFDTNETALRDAFAEHGEIIEVKVICDRMTSKSKGYGFVQFSS 11
R R +S+ LF+GGLS+DTNE L++AF +HGEIIEVKVICD ++ KSKGYGFV+F+S
Sbjct: 18 RSFWARHSSTNLFVGGLSYDTNEPVLKEAFGKHGEIIEVKVICDHVSGKSKGYGFVKFTS 77
>ref|NP_001236472.1| uncharacterized protein LOC100306540 [Glycine max]
gi|571491190|ref|XP_006591823.1| PREDICTED:
uncharacterized protein LOC100306540 isoform X1 [Glycine
max] gi|571491192|ref|XP_006591824.1| PREDICTED:
uncharacterized protein LOC100306540 isoform X2 [Glycine
max] gi|255628821|gb|ACU14755.1| unknown [Glycine max]
Length = 146
Score = 85.1 bits (209), Expect = 9e-15
Identities = 40/66 (60%), Positives = 50/66 (75%)
Frame = -1
Query: 205 FSFPARRLLVRFTSSKLFIGGLSFDTNETALRDAFAEHGEIIEVKVICDRMTSKSKGYGF 26
F P + +S+KLF+ GLS+DTNE LRDAF +HGEIIEVKVICD +T KS+GYGF
Sbjct: 44 FHLPRFLCVRHHSSTKLFVTGLSYDTNEPILRDAFGQHGEIIEVKVICDHVTGKSRGYGF 103
Query: 25 VQFSSQ 8
V+F S+
Sbjct: 104 VRFVSE 109
>gb|ACF74325.1| unknown [Arachis hypogaea]
Length = 112
Score = 85.1 bits (209), Expect = 9e-15
Identities = 38/59 (64%), Positives = 49/59 (83%)
Frame = -1
Query: 184 LLVRFTSSKLFIGGLSFDTNETALRDAFAEHGEIIEVKVICDRMTSKSKGYGFVQFSSQ 8
L R +S+ L + GLS+DTNET LRDAF +HGE+IEVKVICD +T KSKGYGFV+F+++
Sbjct: 25 LFPRHSSTNLLVTGLSYDTNETVLRDAFEQHGELIEVKVICDHVTGKSKGYGFVRFTTE 83
>ref|XP_003565182.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 109
Score = 84.7 bits (208), Expect = 1e-14
Identities = 43/69 (62%), Positives = 55/69 (79%), Gaps = 4/69 (5%)
Frame = -1
Query: 202 SFPARRLLVR---FTS-SKLFIGGLSFDTNETALRDAFAEHGEIIEVKVICDRMTSKSKG 35
+ P R LL R F+S SKLF+GGLS+DTNE AL+DAF++HG + EVKVIC +T +SKG
Sbjct: 13 TIPLRNLLNRSANFSSCSKLFVGGLSYDTNEIALKDAFSQHGTVTEVKVICHPVTGRSKG 72
Query: 34 YGFVQFSSQ 8
YGFV+FSS+
Sbjct: 73 YGFVKFSSE 81
>ref|XP_002862718.1| hypothetical protein ARALYDRAFT_359421 [Arabidopsis lyrata subsp.
lyrata] gi|297308404|gb|EFH38976.1| hypothetical protein
ARALYDRAFT_359421 [Arabidopsis lyrata subsp. lyrata]
Length = 113
Score = 84.7 bits (208), Expect = 1e-14
Identities = 39/63 (61%), Positives = 50/63 (79%)
Frame = -1
Query: 190 RRLLVRFTSSKLFIGGLSFDTNETALRDAFAEHGEIIEVKVICDRMTSKSKGYGFVQFSS 11
R L +R + SKLF+GGLS+DTNE L++ F ++GE+IEVKVICD + KSKGYGFV F S
Sbjct: 17 RYLTIRGSCSKLFVGGLSYDTNEPVLKNEFEKYGEVIEVKVICDHKSGKSKGYGFVLFDS 76
Query: 10 QEA 2
+EA
Sbjct: 77 EEA 79