BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00037327
         (657 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006474977.1| PREDICTED: DNA topoisomerase 1-like isoform ...    72   1e-10
ref|XP_006452480.1| hypothetical protein CICLE_v10007398mg [Citr...    72   1e-10
ref|XP_006452479.1| hypothetical protein CICLE_v10007398mg [Citr...    72   1e-10
ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis v...    72   1e-10
gb|EOY12192.1| DNA topoisomerase I alpha isoform 4, partial [The...    70   4e-10
gb|EOY12191.1| DNA topoisomerase I alpha isoform 3 [Theobroma ca...    70   4e-10
gb|EOY12189.1| DNA topoisomerase I alpha isoform 1 [Theobroma ca...    70   4e-10
ref|XP_004972822.1| PREDICTED: DNA topoisomerase 1-like isoform ...    67   6e-09
ref|XP_004972821.1| PREDICTED: DNA topoisomerase 1-like isoform ...    67   6e-09
ref|XP_004972820.1| PREDICTED: DNA topoisomerase 1-like isoform ...    67   6e-09
ref|XP_002300344.1| DNA topoisomerase family protein [Populus tr...    66   8e-09
ref|XP_002443872.1| hypothetical protein SORBIDRAFT_07g003610 [S...    65   2e-08
ref|NP_001061015.1| Os08g0154600 [Oryza sativa Japonica Group] g...    63   7e-08
gb|EAZ05628.1| hypothetical protein OsI_27847 [Oryza sativa Indi...    63   7e-08
ref|XP_002529020.1| DNA topoisomerase type I, putative [Ricinus ...    60   4e-07
dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]                  60   4e-07
gb|EXC36325.1| DNA topoisomerase 1 [Morus notabilis]                   60   7e-07
dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. g...    59   2e-06
dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata]        59   2e-06
dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata]              59   2e-06

>ref|XP_006474977.1| PREDICTED: DNA topoisomerase 1-like isoform X1 [Citrus sinensis]
           gi|568842074|ref|XP_006474978.1| PREDICTED: DNA
           topoisomerase 1-like isoform X2 [Citrus sinensis]
           gi|568842076|ref|XP_006474979.1| PREDICTED: DNA
           topoisomerase 1-like isoform X3 [Citrus sinensis]
           gi|568842078|ref|XP_006474980.1| PREDICTED: DNA
           topoisomerase 1-like isoform X4 [Citrus sinensis]
          Length = 902

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 61/184 (33%), Positives = 88/184 (47%), Gaps = 8/184 (4%)
 Frame = -3

Query: 529 EKMDLVDNPTIKSENSD--DDKPLSVKYSGV---INRSAFSHAAEAPQKPKPSLPHSMKP 365
           +K ++ D   +KS+++D  DDKPLS +  G    +N+   +  A+A          ++  
Sbjct: 136 KKEEIKDGNGLKSDDNDSEDDKPLSARLKGNSKNVNQGIGASKADA----------AISE 185

Query: 364 XXXXXXXXXXXXEKPLLSRFQSNVIGVSSAKVSNGPEKPXXXXXXXXXXXXXGISSKTTA 185
                       E PL SRF  +  G S AK  +  EK                +S+ T 
Sbjct: 186 VNVKTDPEDSDDEVPLSSRFPKSNAGTSGAKPIDSDEKKPLASKVQQNGS----TSRETQ 241

Query: 184 PKGGE---KRPLSDANPAESSSSKKAKLTGTSVSAKVKQEVSVSKESKEDDNDHTPIAQR 14
            K      KRPL  A+ + +SS+KK K++ TS   KVKQ V+V  E K DD+DH PI+QR
Sbjct: 242 QKSSSVPVKRPLQKASSSGASSAKKPKVSDTSKEVKVKQ-VTVKVEKKADDDDHIPISQR 300

Query: 13  MKKS 2
           MK S
Sbjct: 301 MKNS 304


>ref|XP_006452480.1| hypothetical protein CICLE_v10007398mg [Citrus clementina]
           gi|557555706|gb|ESR65720.1| hypothetical protein
           CICLE_v10007398mg [Citrus clementina]
          Length = 824

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 61/184 (33%), Positives = 88/184 (47%), Gaps = 8/184 (4%)
 Frame = -3

Query: 529 EKMDLVDNPTIKSENSD--DDKPLSVKYSGV---INRSAFSHAAEAPQKPKPSLPHSMKP 365
           +K ++ D   +KS+++D  DDKPLS +  G    +N+   +  A+A          ++  
Sbjct: 136 KKEEIKDGNGLKSDDNDSEDDKPLSARLKGNTKNVNQGIGASKADA----------AISE 185

Query: 364 XXXXXXXXXXXXEKPLLSRFQSNVIGVSSAKVSNGPEKPXXXXXXXXXXXXXGISSKTTA 185
                       E PL SRF  +  G S AK  +  EK                +S+ T 
Sbjct: 186 VNVKTDPEDSDDEVPLSSRFPKSNAGTSGAKPIDSDEKKPLASKVQQNGS----TSRETQ 241

Query: 184 PKGGE---KRPLSDANPAESSSSKKAKLTGTSVSAKVKQEVSVSKESKEDDNDHTPIAQR 14
            K      KRPL  A+ + +SS+KK K++ TS   KVKQ V+V  E K DD+DH PI+QR
Sbjct: 242 QKSSSVPVKRPLQKASSSGASSAKKPKVSDTSKEVKVKQ-VTVKVEKKADDDDHIPISQR 300

Query: 13  MKKS 2
           MK S
Sbjct: 301 MKNS 304


>ref|XP_006452479.1| hypothetical protein CICLE_v10007398mg [Citrus clementina]
           gi|567920950|ref|XP_006452481.1| hypothetical protein
           CICLE_v10007398mg [Citrus clementina]
           gi|557555705|gb|ESR65719.1| hypothetical protein
           CICLE_v10007398mg [Citrus clementina]
           gi|557555707|gb|ESR65721.1| hypothetical protein
           CICLE_v10007398mg [Citrus clementina]
          Length = 902

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 61/184 (33%), Positives = 88/184 (47%), Gaps = 8/184 (4%)
 Frame = -3

Query: 529 EKMDLVDNPTIKSENSD--DDKPLSVKYSGV---INRSAFSHAAEAPQKPKPSLPHSMKP 365
           +K ++ D   +KS+++D  DDKPLS +  G    +N+   +  A+A          ++  
Sbjct: 136 KKEEIKDGNGLKSDDNDSEDDKPLSARLKGNTKNVNQGIGASKADA----------AISE 185

Query: 364 XXXXXXXXXXXXEKPLLSRFQSNVIGVSSAKVSNGPEKPXXXXXXXXXXXXXGISSKTTA 185
                       E PL SRF  +  G S AK  +  EK                +S+ T 
Sbjct: 186 VNVKTDPEDSDDEVPLSSRFPKSNAGTSGAKPIDSDEKKPLASKVQQNGS----TSRETQ 241

Query: 184 PKGGE---KRPLSDANPAESSSSKKAKLTGTSVSAKVKQEVSVSKESKEDDNDHTPIAQR 14
            K      KRPL  A+ + +SS+KK K++ TS   KVKQ V+V  E K DD+DH PI+QR
Sbjct: 242 QKSSSVPVKRPLQKASSSGASSAKKPKVSDTSKEVKVKQ-VTVKVEKKADDDDHIPISQR 300

Query: 13  MKKS 2
           MK S
Sbjct: 301 MKNS 304


>ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera]
          Length = 883

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 59/176 (33%), Positives = 81/176 (46%), Gaps = 12/176 (6%)
 Frame = -3

Query: 493 SENSDDDKPLSVKYSGVINRSAFSHA---AEAPQKPKPSLPHSMKPXXXXXXXXXXXXEK 323
           S++S+D+ PL +K      + A S     ++    P  S P S K             ++
Sbjct: 114 SDDSEDEIPLLLKLQLKSRKGASSSKLLDSKGLSSPASSRPQSQKAKVNNKNLSDDSEDE 173

Query: 322 -PLLSRFQSNV-IGVSSAKVSNGPEKPXXXXXXXXXXXXXGISSKTTAPKGGEKRPLSDA 149
            PL S+F+    +G S  K+ N  EK                  +  +PKG  KRPL  A
Sbjct: 174 IPLSSKFRLKTGMGASLDKLDNFDEKKPLTSTLKPNGISKKDDERVKSPKGQNKRPLGQA 233

Query: 148 NPAESSSSKKAKLTGTSVSAKVKQEVSVSKESKEDDND-------HTPIAQRMKKS 2
           N +  SSSKK KL   SV  KVKQ VSV  E K+DD+D       +TP  +R+KKS
Sbjct: 234 NTSHHSSSKKPKLLDGSVKGKVKQ-VSVKAEQKDDDDDDNDDDDEYTPTVKRLKKS 288


>gb|EOY12192.1| DNA topoisomerase I alpha isoform 4, partial [Theobroma cacao]
          Length = 733

 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 57/185 (30%), Positives = 86/185 (46%), Gaps = 2/185 (1%)
 Frame = -3

Query: 550 IVEGRSTEKMDLVDNPTIKSENSDDDKPLSVKYSGVINRSAFSHAAEAPQKPKPSLPHSM 371
           + EGRS  K      P    ++ DD  PLS +  G+ N+     +  AP + +  +P + 
Sbjct: 5   VKEGRSPIKG--TTEPNSDDDDDDDSLPLSARLKGISNQGNKGASTSAPAQSRRLVPKT- 61

Query: 370 KPXXXXXXXXXXXXEKPLLSRF--QSNVIGVSSAKVSNGPEKPXXXXXXXXXXXXXGISS 197
                         E PL +RF  +SN  G SS+++ +  EK                  
Sbjct: 62  ---EVKVSAEDPDDEAPLSARFNVKSNT-GTSSSRLHDCDEKKPLASKIQQNGSIMKGKQ 117

Query: 196 KTTAPKGGEKRPLSDANPAESSSSKKAKLTGTSVSAKVKQEVSVSKESKEDDNDHTPIAQ 17
           + ++   G KRPL   N ++ SS+KK K +    + K KQ V+V  E  ++D+DH PIAQ
Sbjct: 118 QNSSTLSG-KRPLDKGNSSDHSSAKKPKTSDAPTTMKTKQ-VTVKAEKADEDDDHMPIAQ 175

Query: 16  RMKKS 2
           RMKKS
Sbjct: 176 RMKKS 180


>gb|EOY12191.1| DNA topoisomerase I alpha isoform 3 [Theobroma cacao]
           gi|508720296|gb|EOY12193.1| DNA topoisomerase I alpha
           isoform 3 [Theobroma cacao]
          Length = 836

 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 57/185 (30%), Positives = 86/185 (46%), Gaps = 2/185 (1%)
 Frame = -3

Query: 550 IVEGRSTEKMDLVDNPTIKSENSDDDKPLSVKYSGVINRSAFSHAAEAPQKPKPSLPHSM 371
           + EGRS  K      P    ++ DD  PLS +  G+ N+     +  AP + +  +P + 
Sbjct: 132 VKEGRSPIKG--TTEPNSDDDDDDDSLPLSARLKGISNQGNKGASTSAPAQSRRLVPKT- 188

Query: 370 KPXXXXXXXXXXXXEKPLLSRF--QSNVIGVSSAKVSNGPEKPXXXXXXXXXXXXXGISS 197
                         E PL +RF  +SN  G SS+++ +  EK                  
Sbjct: 189 ---EVKVSAEDPDDEAPLSARFNVKSNT-GTSSSRLHDCDEKKPLASKIQQNGSIMKGKQ 244

Query: 196 KTTAPKGGEKRPLSDANPAESSSSKKAKLTGTSVSAKVKQEVSVSKESKEDDNDHTPIAQ 17
           + ++   G KRPL   N ++ SS+KK K +    + K KQ V+V  E  ++D+DH PIAQ
Sbjct: 245 QNSSTLSG-KRPLDKGNSSDHSSAKKPKTSDAPTTMKTKQ-VTVKAEKADEDDDHMPIAQ 302

Query: 16  RMKKS 2
           RMKKS
Sbjct: 303 RMKKS 307


>gb|EOY12189.1| DNA topoisomerase I alpha isoform 1 [Theobroma cacao]
           gi|508720293|gb|EOY12190.1| DNA topoisomerase I alpha
           isoform 1 [Theobroma cacao]
          Length = 904

 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 57/185 (30%), Positives = 86/185 (46%), Gaps = 2/185 (1%)
 Frame = -3

Query: 550 IVEGRSTEKMDLVDNPTIKSENSDDDKPLSVKYSGVINRSAFSHAAEAPQKPKPSLPHSM 371
           + EGRS  K      P    ++ DD  PLS +  G+ N+     +  AP + +  +P + 
Sbjct: 132 VKEGRSPIKG--TTEPNSDDDDDDDSLPLSARLKGISNQGNKGASTSAPAQSRRLVPKT- 188

Query: 370 KPXXXXXXXXXXXXEKPLLSRF--QSNVIGVSSAKVSNGPEKPXXXXXXXXXXXXXGISS 197
                         E PL +RF  +SN  G SS+++ +  EK                  
Sbjct: 189 ---EVKVSAEDPDDEAPLSARFNVKSNT-GTSSSRLHDCDEKKPLASKIQQNGSIMKGKQ 244

Query: 196 KTTAPKGGEKRPLSDANPAESSSSKKAKLTGTSVSAKVKQEVSVSKESKEDDNDHTPIAQ 17
           + ++   G KRPL   N ++ SS+KK K +    + K KQ V+V  E  ++D+DH PIAQ
Sbjct: 245 QNSSTLSG-KRPLDKGNSSDHSSAKKPKTSDAPTTMKTKQ-VTVKAEKADEDDDHMPIAQ 302

Query: 16  RMKKS 2
           RMKKS
Sbjct: 303 RMKKS 307


>ref|XP_004972822.1| PREDICTED: DNA topoisomerase 1-like isoform X3 [Setaria italica]
          Length = 903

 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 61/190 (32%), Positives = 91/190 (47%), Gaps = 16/190 (8%)
 Frame = -3

Query: 529 EKMDLVDNPTIKSENSDDDKPLSVKY------SGVINRSAFSHAAEAPQKP-------KP 389
           +K+  VD    K+++SDDDKPLS+K       S   +R     A    ++P       KP
Sbjct: 139 KKLKRVDE---KADDSDDDKPLSLKINSSKMSSNCASRPVLQKAVAKVEQPDEDSDDDKP 195

Query: 388 ---SLPHSMKPXXXXXXXXXXXXEKPLLSRFQSNVIGVSSAKVSNGPEKPXXXXXXXXXX 218
               LP +  P            EKPL +RF S V G  + K+++  +            
Sbjct: 196 LASRLPTNAAPKSGGNASEDSEDEKPLAARF-SKVSGSGNLKLTSSSK------------ 242

Query: 217 XXXGISSKTTAPKGGEKRPLSDANPAESSSSKKAKLTGTSVSAKVKQEVSVSKESKEDDN 38
              G+++ +  P+   KRPL ++N   S + KKAK +  S SA VK+E+      K DDN
Sbjct: 243 ---GLNNDSNGPRNLGKRPLDNSNQT-SLALKKAKPSNVSASASVKREI------KADDN 292

Query: 37  DHTPIAQRMK 8
           D+TP+AQR+K
Sbjct: 293 DNTPLAQRLK 302


>ref|XP_004972821.1| PREDICTED: DNA topoisomerase 1-like isoform X2 [Setaria italica]
          Length = 930

 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 61/190 (32%), Positives = 91/190 (47%), Gaps = 16/190 (8%)
 Frame = -3

Query: 529 EKMDLVDNPTIKSENSDDDKPLSVKY------SGVINRSAFSHAAEAPQKP-------KP 389
           +K+  VD    K+++SDDDKPLS+K       S   +R     A    ++P       KP
Sbjct: 139 KKLKRVDE---KADDSDDDKPLSLKINSSKMSSNCASRPVLQKAVAKVEQPDEDSDDDKP 195

Query: 388 ---SLPHSMKPXXXXXXXXXXXXEKPLLSRFQSNVIGVSSAKVSNGPEKPXXXXXXXXXX 218
               LP +  P            EKPL +RF S V G  + K+++  +            
Sbjct: 196 LASRLPTNAAPKSGGNASEDSEDEKPLAARF-SKVSGSGNLKLTSSSK------------ 242

Query: 217 XXXGISSKTTAPKGGEKRPLSDANPAESSSSKKAKLTGTSVSAKVKQEVSVSKESKEDDN 38
              G+++ +  P+   KRPL ++N   S + KKAK +  S SA VK+E+      K DDN
Sbjct: 243 ---GLNNDSNGPRNLGKRPLDNSNQT-SLALKKAKPSNVSASASVKREI------KADDN 292

Query: 37  DHTPIAQRMK 8
           D+TP+AQR+K
Sbjct: 293 DNTPLAQRLK 302


>ref|XP_004972820.1| PREDICTED: DNA topoisomerase 1-like isoform X1 [Setaria italica]
          Length = 932

 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 61/190 (32%), Positives = 91/190 (47%), Gaps = 16/190 (8%)
 Frame = -3

Query: 529 EKMDLVDNPTIKSENSDDDKPLSVKY------SGVINRSAFSHAAEAPQKP-------KP 389
           +K+  VD    K+++SDDDKPLS+K       S   +R     A    ++P       KP
Sbjct: 139 KKLKRVDE---KADDSDDDKPLSLKINSSKMSSNCASRPVLQKAVAKVEQPDEDSDDDKP 195

Query: 388 ---SLPHSMKPXXXXXXXXXXXXEKPLLSRFQSNVIGVSSAKVSNGPEKPXXXXXXXXXX 218
               LP +  P            EKPL +RF S V G  + K+++  +            
Sbjct: 196 LASRLPTNAAPKSGGNASEDSEDEKPLAARF-SKVSGSGNLKLTSSSK------------ 242

Query: 217 XXXGISSKTTAPKGGEKRPLSDANPAESSSSKKAKLTGTSVSAKVKQEVSVSKESKEDDN 38
              G+++ +  P+   KRPL ++N   S + KKAK +  S SA VK+E+      K DDN
Sbjct: 243 ---GLNNDSNGPRNLGKRPLDNSNQT-SLALKKAKPSNVSASASVKREI------KADDN 292

Query: 37  DHTPIAQRMK 8
           D+TP+AQR+K
Sbjct: 293 DNTPLAQRLK 302


>ref|XP_002300344.1| DNA topoisomerase family protein [Populus trichocarpa]
           gi|222847602|gb|EEE85149.1| DNA topoisomerase family
           protein [Populus trichocarpa]
          Length = 877

 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 54/168 (32%), Positives = 75/168 (44%), Gaps = 2/168 (1%)
 Frame = -3

Query: 499 IKSENSDDDKPLSVKYSGVINRSAFSHAAEAPQKPKPSLPHSMKPXXXXXXXXXXXXEKP 320
           +  E+S+DDKPLS +  G  N       A A  K +PS    +                P
Sbjct: 132 VDDEDSEDDKPLSSRIKGSTNNVNKGVTAPAHVKDEPSDDDEV----------------P 175

Query: 319 LLSRF--QSNVIGVSSAKVSNGPEKPXXXXXXXXXXXXXGISSKTTAPKGGEKRPLSDAN 146
           L SRF  +SN    SS  + +   +P                 K++      KRP+ +  
Sbjct: 176 LSSRFAMKSNAGTSSSKSIRSSEIRPFPSKSQLNGSTKNDKQQKSSVVP--TKRPMDNKV 233

Query: 145 PAESSSSKKAKLTGTSVSAKVKQEVSVSKESKEDDNDHTPIAQRMKKS 2
           P+  SS+KK KL     + KVKQ V+V  E K DD+DH  I+QRMKK+
Sbjct: 234 PSNHSSAKKPKLLDACTTTKVKQ-VTVKVEQKADDDDHLTISQRMKKA 280


>ref|XP_002443872.1| hypothetical protein SORBIDRAFT_07g003610 [Sorghum bicolor]
           gi|241940222|gb|EES13367.1| hypothetical protein
           SORBIDRAFT_07g003610 [Sorghum bicolor]
          Length = 921

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 62/191 (32%), Positives = 91/191 (47%), Gaps = 17/191 (8%)
 Frame = -3

Query: 529 EKMDLVDNPTIKSENSDDD-KPLSVKY--SGVINRSAFSHAAE--APQKPKPS------- 386
           +K+  VD    K+++SDDD KPLS+K   S + N S      +  AP+  +P        
Sbjct: 153 KKLKRVDTAVHKADDSDDDDKPLSLKINSSKMSNNSVSKPVLQRIAPKVEQPDEDSDDDK 212

Query: 385 -----LPHSMKPXXXXXXXXXXXXEKPLLSRFQSNVIGVSSAKVSNGPEKPXXXXXXXXX 221
                LP++  P            EKPL +RF S V G  + K ++  +           
Sbjct: 213 PLASRLPNNACPKSGGNVSEDSEDEKPLAARF-SKVAGSGNLKTASSSK----------- 260

Query: 220 XXXXGISSKTTAPKGGEKRPLSDANPAESSSSKKAKLTGTSVSAKVKQEVSVSKESKEDD 41
               G++S T   +   KRPL ++N   S + KKAK +  S SA VK+E+      K DD
Sbjct: 261 ----GLNSDTNGQRSLGKRPLDNSNQT-SLAIKKAKPSNVSASASVKREI------KTDD 309

Query: 40  NDHTPIAQRMK 8
           ND+TP+AQR+K
Sbjct: 310 NDNTPLAQRLK 320


>ref|NP_001061015.1| Os08g0154600 [Oryza sativa Japonica Group]
           gi|27817923|dbj|BAC55688.1| putative DNA topoisomerase I
           [Oryza sativa Japonica Group]
           gi|113622984|dbj|BAF22929.1| Os08g0154600 [Oryza sativa
           Japonica Group] gi|222639933|gb|EEE68065.1| hypothetical
           protein OsJ_26075 [Oryza sativa Japonica Group]
          Length = 916

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 67/229 (29%), Positives = 100/229 (43%), Gaps = 19/229 (8%)
 Frame = -3

Query: 637 SHRHNSVSAIVQRKCSVDSEKAHIHSSHLIVEGRSTEKMDLVDNPTIKS---ENSDDDKP 467
           SH  NSV     ++  V+ +       H  +  R   +   +  P + S    +SDDDKP
Sbjct: 95  SHNSNSVDKSKLKRPFVEDKSDDSEDDHKPIGLRRKVEDRNLKKPAVGSGTANDSDDDKP 154

Query: 466 LSVKYSGVINRSAFSHAA---------EAP------QKPKPS-LPHSMKPXXXXXXXXXX 335
           LS+K +     S+ ++ A         E P       KP  S LP +             
Sbjct: 155 LSLKINSTKTPSSSANKAIVLKTTPKIEQPGDDSEDDKPLASRLPTNAALKRGGNVSDDS 214

Query: 334 XXEKPLLSRFQSNVIGVSSAKVSNGPEKPXXXXXXXXXXXXXGISSKTTAPKGGEKRPLS 155
             EKPL +RF S V G +SA +S+  +K                +  +T+ +   KRP+ 
Sbjct: 215 EDEKPLAARF-SKVTGNASASISSSKDKVLSASIKASSSSKMSNNDASTS-RNSIKRPI- 271

Query: 154 DANPAESSSSKKAKLTGTSVSAKVKQEVSVSKESKEDDNDHTPIAQRMK 8
           D N   SS+ KKA+ +  S SA VK      +E K DDND+ P++QR+K
Sbjct: 272 DNNNQTSSALKKARPSDVSASASVK------REPKADDNDNVPLSQRLK 314


>gb|EAZ05628.1| hypothetical protein OsI_27847 [Oryza sativa Indica Group]
          Length = 916

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 67/229 (29%), Positives = 100/229 (43%), Gaps = 19/229 (8%)
 Frame = -3

Query: 637 SHRHNSVSAIVQRKCSVDSEKAHIHSSHLIVEGRSTEKMDLVDNPTIKS---ENSDDDKP 467
           SH  NSV     ++  V+ +       H  +  R   +   +  P + S    +SDDDKP
Sbjct: 95  SHNSNSVDKSKLKRPFVEDKSDDSEDDHKPIGLRRKVEDRNLKKPAVGSGTANDSDDDKP 154

Query: 466 LSVKYSGVINRSAFSHAA---------EAP------QKPKPS-LPHSMKPXXXXXXXXXX 335
           LS+K +     S+ ++ A         E P       KP  S LP +             
Sbjct: 155 LSLKINSTKTPSSSANKAIVLKTTPKIEQPGDDSEDDKPLASRLPTNAALKRGGNVSDDS 214

Query: 334 XXEKPLLSRFQSNVIGVSSAKVSNGPEKPXXXXXXXXXXXXXGISSKTTAPKGGEKRPLS 155
             EKPL +RF S V G +SA +S+  +K                +  +T+ +   KRP+ 
Sbjct: 215 EDEKPLAARF-SKVTGNASASISSSKDKVLSASIKASSSSKMSNNDASTS-RNSIKRPI- 271

Query: 154 DANPAESSSSKKAKLTGTSVSAKVKQEVSVSKESKEDDNDHTPIAQRMK 8
           D N   SS+ KKA+ +  S SA VK      +E K DDND+ P++QR+K
Sbjct: 272 DNNNQTSSALKKARPSDVSASASVK------REPKADDNDNVPLSQRLK 314


>ref|XP_002529020.1| DNA topoisomerase type I, putative [Ricinus communis]
           gi|223531500|gb|EEF33331.1| DNA topoisomerase type I,
           putative [Ricinus communis]
          Length = 891

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 55/162 (33%), Positives = 70/162 (43%), Gaps = 1/162 (0%)
 Frame = -3

Query: 490 ENSDDDKPLSVKYSGVINRSAFSHAAEAPQKPKPSLPHSMKPXXXXXXXXXXXXEKPLLS 311
           E+S+DD PLS +  G  N +  S    AP++ K       K               PL S
Sbjct: 150 EDSEDDLPLSARRKG--NTNNVSKVVTAPKRVKDEDSDDDKV--------------PLCS 193

Query: 310 RF-QSNVIGVSSAKVSNGPEKPXXXXXXXXXXXXXGISSKTTAPKGGEKRPLSDANPAES 134
           RF   +  G S  K +N  EK                  +  AP    KRPL  AN +E 
Sbjct: 194 RFPMKSTAGTSGNKPNNISEKKPLPSKVQQNGSTSK-DKQQKAPLIPTKRPLDKANSSEQ 252

Query: 133 SSSKKAKLTGTSVSAKVKQEVSVSKESKEDDNDHTPIAQRMK 8
           SS KK KL+  S   KVKQ    + +++EDD D  PIAQR K
Sbjct: 253 SSIKKPKLSAGSTITKVKQ---ATVKAEEDDPDDIPIAQRKK 291


>dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]
          Length = 910

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 48/190 (25%), Positives = 79/190 (41%), Gaps = 2/190 (1%)
 Frame = -3

Query: 565 HSSHLIVEGRSTEKMDLVDNPTIKSENSDDDKPLSVKYSGVINRSAFSHAAEAPQKPKPS 386
           H S  +++   +  + L       SE+SDD KPLS+++S   ++   +  ++   KP+  
Sbjct: 139 HKSATVIKEEKSSPLRLASAIINDSEDSDDGKPLSLRHSASSSKGNTNQVSKEGSKPENE 198

Query: 385 LPHSMKPXXXXXXXXXXXXEKPLLSRFQ-SNVIGVSSAKVSNGPEKPXXXXXXXXXXXXX 209
                              EKPL SRF   + +G S++K  +  +               
Sbjct: 199 ---------------DSDDEKPLSSRFPLKSGVGESTSKAYDSDDDKPLAKKLQHNGSAM 243

Query: 208 GISSKTTAPKGGEKRPLSDANPAESSSSKKAKLTGTSVSAKVKQ-EVSVSKESKEDDNDH 32
                        KRP  D   +   S KK KL+  +     KQ  V    ++++DD+DH
Sbjct: 244 RDGQPNKYSNMSNKRPPGDIKSSNQLSVKKPKLSSVTAPTNKKQASVKPEPKAEDDDDDH 303

Query: 31  TPIAQRMKKS 2
            PI+QR+KKS
Sbjct: 304 LPISQRIKKS 313


>gb|EXC36325.1| DNA topoisomerase 1 [Morus notabilis]
          Length = 908

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 60/192 (31%), Positives = 81/192 (42%), Gaps = 9/192 (4%)
 Frame = -3

Query: 550 IVEGRSTEKMDLVDNPTIKSENSDDDKPLSVKYSGVIN-------RSAFSHAAEAPQKPK 392
           + E +S+ +     +   +  +SDDDKPLS +  G  N       +S             
Sbjct: 131 VKEEKSSIRQSTTSDIHFEDSDSDDDKPLSARLKGNSNQGDKGTGKSTAGDKGPGKHTTG 190

Query: 391 PSLPHSMKPXXXXXXXXXXXXEKPLLSRFQ--SNVIGVSSAKVSNGPEKPXXXXXXXXXX 218
           P LP   K              +PL S+FQ  SN  G S +  S+  +K           
Sbjct: 191 PQLPPVKKKESQDSDD------EPLSSKFQVKSNA-GTSGSNRSDCDDKKPLSSINKLNG 243

Query: 217 XXXGISSKTTAPKGGEKRPLSDANPAESSSSKKAKLTGTSVSAKVKQEVSVSKESKEDDN 38
                  K        KRPL D   ++ S  KK KL+ +S   K KQE SV  ESK DD+
Sbjct: 244 STVKDERKPLDISA--KRPL-DKQKSDVSPVKKQKLSYSSSLMKSKQE-SVKAESKADDD 299

Query: 37  DHTPIAQRMKKS 2
           DH PI+QR+KKS
Sbjct: 300 DHVPISQRIKKS 311


>dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. glabra]
          Length = 920

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 57/216 (26%), Positives = 87/216 (40%), Gaps = 5/216 (2%)
 Frame = -3

Query: 634 HRHNSVSAIVQRKCSVDSEKAHIHSSHLIVEGRSTEKMDLVDNPTIKSENSDDDKPLSVK 455
           + H S +A ++ K SV + KA+ +S                       E+SDD+KPLS +
Sbjct: 123 NHHKSSAAFIEPKPSVPAAKANSNS-----------------------ESSDDEKPLSAR 159

Query: 454 YSGVINRSAFSHA----AEAPQKPKPSLPHSMKPXXXXXXXXXXXXEKPLLSRFQS-NVI 290
             G  ++   +HA     ++    +P +  S               EKPL  RF S + +
Sbjct: 160 TFGCSSKGKSNHANKEGGDSCSIRRPVIEES----------EDSEDEKPLSRRFTSKSSL 209

Query: 289 GVSSAKVSNGPEKPXXXXXXXXXXXXXGISSKTTAPKGGEKRPLSDANPAESSSSKKAKL 110
           G S++K  +  EK                S    +     KRP  +      SS KK KL
Sbjct: 210 GESTSKSYDSDEKKPLAAKVQPNGSASRDSPMNKSASLSNKRPPGEVKSLNQSSLKKPKL 269

Query: 109 TGTSVSAKVKQEVSVSKESKEDDNDHTPIAQRMKKS 2
           +    S   KQ     +   EDD+D+ P++QR KKS
Sbjct: 270 SSPITSISNKQAAVKPEPKAEDDDDNIPLSQRGKKS 305


>dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata]
          Length = 925

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 57/216 (26%), Positives = 87/216 (40%), Gaps = 5/216 (2%)
 Frame = -3

Query: 634 HRHNSVSAIVQRKCSVDSEKAHIHSSHLIVEGRSTEKMDLVDNPTIKSENSDDDKPLSVK 455
           + H S +A ++ K SV + KA+ +S                       E+SDD+KPLS +
Sbjct: 122 NHHKSSAAFIEPKPSVPAAKANSNS-----------------------ESSDDEKPLSAR 158

Query: 454 YSGVINRSAFSHA----AEAPQKPKPSLPHSMKPXXXXXXXXXXXXEKPLLSRFQS-NVI 290
             G  ++   +HA     ++    +P +  S               EKPL  RF S + +
Sbjct: 159 TFGCSSKGKSNHANKEGGDSCSIRRPVIEES----------EDSEDEKPLSCRFTSKSSL 208

Query: 289 GVSSAKVSNGPEKPXXXXXXXXXXXXXGISSKTTAPKGGEKRPLSDANPAESSSSKKAKL 110
           G S++K  +  EK                     +     KRP  +A     SS KK KL
Sbjct: 209 GESTSKSYDSDEKKPLAAKVQQNGSASRDGPMNKSASLSNKRPPGEAKSLNQSSVKKPKL 268

Query: 109 TGTSVSAKVKQEVSVSKESKEDDNDHTPIAQRMKKS 2
           +    S   KQ     +   EDD+D+ P++QR KKS
Sbjct: 269 SSPITSISNKQAAVKPEPKAEDDDDNIPLSQRGKKS 304


>dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata]
          Length = 920

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 57/216 (26%), Positives = 87/216 (40%), Gaps = 5/216 (2%)
 Frame = -3

Query: 634 HRHNSVSAIVQRKCSVDSEKAHIHSSHLIVEGRSTEKMDLVDNPTIKSENSDDDKPLSVK 455
           + H S +A ++ K SV + KA+ +S                       E+SDD+KPLS +
Sbjct: 123 NHHKSSAAFIEPKPSVPAAKANSNS-----------------------ESSDDEKPLSAR 159

Query: 454 YSGVINRSAFSHA----AEAPQKPKPSLPHSMKPXXXXXXXXXXXXEKPLLSRFQS-NVI 290
             G  ++   +HA     ++    +P +  S               EKPL  RF S + +
Sbjct: 160 TFGCSSKGKSNHANKEGGDSCSIRRPVIEES----------EDSEDEKPLSRRFTSKSSL 209

Query: 289 GVSSAKVSNGPEKPXXXXXXXXXXXXXGISSKTTAPKGGEKRPLSDANPAESSSSKKAKL 110
           G S++K  +  EK                S    +     KRP  +      SS KK KL
Sbjct: 210 GESTSKSYDSDEKKPLAAKVQPNGSASRDSPMNKSASLSNKRPPGEVKSLNQSSLKKPKL 269

Query: 109 TGTSVSAKVKQEVSVSKESKEDDNDHTPIAQRMKKS 2
           +    S   KQ     +   EDD+D+ P++QR KKS
Sbjct: 270 SSPITSISNKQAAVKPEPKAEDDDDNIPLSQRGKKS 305