BLASTX nr result
ID: Zingiber23_contig00037324
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Zingiber23_contig00037324 (2068 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004951807.1| PREDICTED: DNA-directed RNA polymerase E sub... 492 e-136 ref|XP_003577164.1| PREDICTED: DNA-directed RNA polymerase E sub... 489 e-135 ref|XP_006646896.1| PREDICTED: DNA-directed RNA polymerase V sub... 478 e-132 gb|EMT23234.1| DNA-directed RNA polymerase II subunit RPB1-B [Ae... 471 e-130 emb|CBI40152.3| unnamed protein product [Vitis vinifera] 458 e-126 ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub... 458 e-126 ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 444 e-122 ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V sub... 444 e-122 gb|ESW05756.1| hypothetical protein PHAVU_011G206900g [Phaseolus... 444 e-122 gb|EEE56320.1| hypothetical protein OsJ_05410 [Oryza sativa Japo... 444 e-122 ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V sub... 435 e-119 ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E sub... 429 e-117 ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V sub... 428 e-117 ref|XP_006411250.1| hypothetical protein EUTSA_v10016128mg [Eutr... 428 e-117 ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub... 426 e-116 gb|AAY89359.1| RNA polymerase IV largest subunit [Solanum lycope... 426 e-116 ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citr... 424 e-115 ref|XP_002879839.1| NRPD1b [Arabidopsis lyrata subsp. lyrata] gi... 421 e-115 gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinac... 417 e-114 ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu... 417 e-113 >ref|XP_004951807.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Setaria italica] Length = 2038 Score = 492 bits (1266), Expect = e-136 Identities = 284/641 (44%), Positives = 386/641 (60%), Gaps = 17/641 (2%) Frame = +1 Query: 1 CKEKAVYAVFNCLKKVCLKDWAREFYIEYRKQIDLPNKSETFSGLVGHVHLDKTQLKLFN 180 CKE+A V +CL++V L D A + IE++KQI+L SE LVGH+HLDK QL+ N Sbjct: 899 CKERAALTVQSCLRRVTLADCATDISIEHQKQINLDETSEAAPTLVGHIHLDKAQLERIN 958 Query: 181 QNIDEILGKCQDVLFKYTKKKGQLSQFIKRVVLSVCECCNYKQPHDGDLCHFPCLQFTFV 360 + +IL KC+++ +Y KKKG L K++ S C+C + DG L PC+QF+F Sbjct: 959 ISTQDILQKCEEISGRYGKKKGHLCHLFKKITFSTCDCSFAQNTIDGYLHVAPCVQFSFS 1018 Query: 361 DANTAQNDESLECAIHVMAKVICPILLDTIVKGDPRVFEAKIVWIEPDATSWAANSCKTL 540 D NT + ES+E A++V+A +C +LLDTI+KGDPR+ AKI+W+E +ATSW N+ TL Sbjct: 1019 DDNTILS-ESVERAVNVIADSVCSVLLDTIIKGDPRIQSAKIIWVESEATSWVKNTQNTL 1077 Query: 541 KGELGLEIVLEKAAVRENGDAWRMLMDACLPVMHLIDTSRSCPYGIQQNRELLGISCAFD 720 KGE LEI++EK NG AWR +MDAC+PV++LIDT RS PYGIQQ +ELLGISCAFD Sbjct: 1078 KGEPTLEIIVEKDEAVRNGYAWRTVMDACIPVLNLIDTRRSIPYGIQQVKELLGISCAFD 1137 Query: 721 QAVKRLSRSIRMVSKGVMKEHLLLVANSITCTGNLVGFNTGGYKALFRSFKVQVPFTAAT 900 Q V+RLS +++MV+KGV+K+HL+LVANS+TCTGNL+GFNT GYKA FRS KVQVPFT +T Sbjct: 1138 QVVQRLSTTVKMVAKGVLKDHLILVANSMTCTGNLIGFNTSGYKATFRSLKVQVPFTEST 1197 Query: 901 LFTPMKCFETAAEKCQTDSLTSVVSSCSWGKKVAIGTGAPFQILWDKNQTAMHKDIGKGV 1080 LFTPMKCFE AAEKC +DSL VVSSCSWGK AIGTG+ FQILW++NQ +K+ G G+ Sbjct: 1198 LFTPMKCFEKAAEKCDSDSLGCVVSSCSWGKHAAIGTGSSFQILWNENQLKSNKEYGDGL 1257 Query: 1081 YDFLEMLNPTLSGEATGACLADVDDIIEDQEM-EVCLSPV---ANGHMTFEENHEVEYSF 1248 YDFL ++ T +A A L DVD ++E+ + +VCLSP +G TFE+N E E Sbjct: 1258 YDFLALVR-TDQEKAGYAFLDDVDYLVEENAVDDVCLSPEPDGTHGKPTFEDNVE-EQGI 1315 Query: 1249 KKNLNQENRKIENSCQDFASDFGDKSGNWQGWESRQDSGKMAETNAWSSWDSQ---HMGQ 1419 + + EN NS + + G+ SG+W GW + + S WD+ Sbjct: 1316 QNGSSWENDTTMNSSWEQNASAGNDSGDWGGWSNGAAAATKPLDQDNSCWDAHATVENNS 1375 Query: 1420 ITVGSWENKDSQNCSDPSVELNAW---GKGTEKNVA--SWETRSVKSSGGDIWNEKVTKN 1584 G W + N E+N W G G E + +WE +KSS EK KN Sbjct: 1376 TDWGGWGTEKQTN--GEQAEINTWADKGAGMESSAGDDNWE---MKSSA----PEKSKKN 1426 Query: 1585 LEEKEGTSVWKNISWRPKGNSNEDAFSLPGTLDSESSKEPWVVGARDNTGNSWKNGPDAA 1764 L+ W N+ +++E+ + G + W TG+ + G D Sbjct: 1427 LDH----DTWGNMPAPASASASENTW---GEQKGDGGDGAW----EKQTGSCKEQGMDVD 1475 Query: 1765 KLPKATTWGS-----SETEFDKDLNSVQNGKSYNERGKSWN 1872 + +WG S +DK + +G ++ E+ SWN Sbjct: 1476 Q----DSWGKKTMPPSSNMWDKKKSDGVHG-NWEEQPSSWN 1511 >ref|XP_003577164.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Brachypodium distachyon] Length = 1935 Score = 489 bits (1260), Expect = e-135 Identities = 295/671 (43%), Positives = 397/671 (59%), Gaps = 30/671 (4%) Frame = +1 Query: 1 CKEKAVYAVFNCLKKVCLKDWAREFYIEYRKQIDLPNKSETFSGLVGHVHLDKTQLKLFN 180 CKEKA AV N LK+V L+D A + IEY KQI L SE LVGH+HL+K +L + N Sbjct: 879 CKEKAAIAVQNRLKRVTLEDCATDICIEYHKQI-LDGSSEATPALVGHIHLEKARLDMIN 937 Query: 181 QNIDEILGKCQDVLFKYTKKKGQLSQFIKRVVLSVCECCNYKQPH-DGDLCHFPCLQFTF 357 + ++IL KCQ+V K+ KKKG L K++ S C+C ++P DG L PCLQF+F Sbjct: 938 VSTEDILQKCQEVSLKHGKKKGHLGHLFKKITFSTCDCSFTQKPMIDGKLPKVPCLQFSF 997 Query: 358 VDANTAQNDESLECAIHVMAKVICPILLDTIVKGDPRVFEAKIVWIEPDATSWAANSCKT 537 + + ES+E A+ V+A +C +LLDTI+KGDPR+ EAKI+W+ DA SW N+ K Sbjct: 998 SE-DIPMLSESVERAVSVLANSLCDVLLDTIIKGDPRIQEAKIMWVGSDAQSWVKNTRKV 1056 Query: 538 LKGELGLEIVLEKAAVRENGDAWRMLMDACLPVMHLIDTSRSCPYGIQQNRELLGISCAF 717 KGE +EIV+EK + GDAWR+ MDAC+PV+ LIDT RS PYGIQQ RELLGISC+F Sbjct: 1057 SKGEPTVEIVVEKNEASKQGDAWRIAMDACIPVIDLIDTRRSIPYGIQQVRELLGISCSF 1116 Query: 718 DQAVKRLSRSIRMVSKGVMKEHLLLVANSITCTGNLVGFNTGGYKALFRSFKVQVPFTAA 897 DQ V+RLS +++ V+KG++K+HL+LVANS+TCTGNL GFNTGGY+A FR+ KVQVPFT + Sbjct: 1117 DQIVQRLSTTMKTVAKGILKDHLILVANSMTCTGNLYGFNTGGYRATFRALKVQVPFTES 1176 Query: 898 TLFTPMKCFETAAEKCQTDSLTSVVSSCSWGKKVAIGTGAPFQILWDKNQTAMHKDIGKG 1077 TLFTPMKCFE AAEKC +D+L VVSSCSWGK A+GTG+ FQILW++NQ +K+ G G Sbjct: 1177 TLFTPMKCFEKAAEKCHSDALGCVVSSCSWGKHAALGTGSSFQILWNENQLKSNKEYGDG 1236 Query: 1078 VYDFLEMLNPTLSGEATGACLADVDDIIEDQEM-EVCLSPVANGH---MTFEENHEVEYS 1245 +YDFL M+ T +A L DVD ++ED M ++CLSP NG TFE+N E + + Sbjct: 1237 LYDFLAMVR-TDQEKARYTFLDDVDYLVEDNAMDDICLSPELNGTHGVPTFEDNFEHQDT 1295 Query: 1246 FKKNLNQENRKIENSCQDFASDFGDKSGNWQGWESRQDSGKMAETNAW-------SSWD- 1401 N + K S + AS G+ S NW GW ++ A+T A SSWD Sbjct: 1296 QNGNSWENGTKANASWEQNAS-AGNDSDNWGGW---SNAAAAADTGAAKPADQGNSSWDV 1351 Query: 1402 --SQHMGQITVGSWEN---KDSQNCSDPSVELNAWG-KGTEKNVASWETRSVKSSGGDIW 1563 + G W N KD++ S EL+ W +G +K GG W Sbjct: 1352 PATAENDSTDWGGWGNEKAKDNRTVSTEPAELDTWSDRGAKKGT---------DGGGGSW 1402 Query: 1564 NEKVTKNLEEKEGTSVWKNISWRPKGNSNEDAFSLPGTLDSESSKEPWVVGARDNTGN-- 1737 ++ N E GT++ +N SW + +S + S +S+ W A N Sbjct: 1403 GKQT--NTCEDSGTNLERN-SWAKRPSS--PSLSTWAKKNSDGGDGTWDKQANSCKKNVE 1457 Query: 1738 --SWKNGPDAAKLPKATTWGSSETE-----FDKDLNSVQNGKSYNERGKSW-NSNATVD- 1890 SWKN P + P W E+ ++ ++++ K+ SW SNA D Sbjct: 1458 QDSWKNMPVS---PARNAWNKKESSRGDATWEMRASTLEEKKTSESNEGSWEKSNAQKDS 1514 Query: 1891 FNNQQSGNSTR 1923 + N Q G+S + Sbjct: 1515 WGNTQHGSSDK 1525 >ref|XP_006646896.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Oryza brachyantha] Length = 1993 Score = 478 bits (1230), Expect = e-132 Identities = 279/664 (42%), Positives = 385/664 (57%), Gaps = 24/664 (3%) Frame = +1 Query: 1 CKEKAVYAVFNCLKKVCLKDWAREFYIEYRKQIDLPNKSETFSGLVGHVHLDKTQLKLFN 180 CKEKA AV CL+++ L+D A + IEY+KQI L SE LVGH+H D+ L+ N Sbjct: 898 CKEKAAIAVQGCLRRITLEDCATDICIEYQKQISLDGTSEASPALVGHIHFDRAHLERIN 957 Query: 181 QNIDEILGKCQDVLFKYTKKKGQLSQFIKRVVLSVCECCNYKQPHDGDLCHFPCLQFTFV 360 +I++I KCQ+V KY KKKG LS K + S+C+C ++ DG L PCLQF F Sbjct: 958 VSIEDIFQKCQEVSGKYGKKKGHLSHLFKNITFSICDCSFTQKLIDGKLAKVPCLQFFFP 1017 Query: 361 DANTAQNDESLECAIHVMAKVICPILLDTIVKGDPRVFEAKIVWIEPDATSWAANSCKTL 540 ++NT + ES+E A++++A +C +LL+TI+KGDPR+ EAKIVW+ DATSW N+ K Sbjct: 1018 ESNTMLS-ESVEGAVNLLADSVCGVLLNTIIKGDPRIQEAKIVWVGSDATSWVKNTKKES 1076 Query: 541 KGELGLEIVLEKAAVRENGDAWRMLMDACLPVMHLIDTSRSCPYGIQQNRELLGISCAFD 720 KGE +EI++E+ GD+WR+ MDAC+PV+ LIDT RS PYGIQQ RELLGISCAFD Sbjct: 1077 KGEPAVEIIVEEQEALHTGDSWRITMDACIPVLDLIDTRRSIPYGIQQLRELLGISCAFD 1136 Query: 721 QAVKRLSRSIRMVSKGVMKEHLLLVANSITCTGNLVGFNTGGYKALFRSFKVQVPFTAAT 900 Q V+RLS ++RMV+K V+K+HL+LVANS+T TGNL GFNT GYK FRS KVQVPFT +T Sbjct: 1137 QVVQRLSTTVRMVAKDVLKDHLVLVANSMTFTGNLNGFNTAGYKTTFRSLKVQVPFTEST 1196 Query: 901 LFTPMKCFETAAEKCQTDSLTSVVSSCSWGKKVAIGTGAPFQILWDKNQTAMHKDIGKGV 1080 L TPMKCFE AAEKC +DSL VVSSCSWGK A GTG+ FQILW+++Q +K+ G G+ Sbjct: 1197 LITPMKCFEKAAEKCHSDSLGCVVSSCSWGKYAASGTGSSFQILWNESQLKSNKEYGDGL 1256 Query: 1081 YDFLEMLNPTLSGEATGACLADVDDIIEDQEMEVCLSPVANGHM---TFEENHEVEYSFK 1251 YD+L ++ T +A DVD + E+ E +VCLSP G + TF++N E E F+ Sbjct: 1257 YDYLALVR-TDEEKARYTFFDDVDYLAEENETDVCLSPELEGTIGQPTFDDNLE-EQDFQ 1314 Query: 1252 KNLNQENRKIENSCQDFASDFGDKSGNWQGWESRQDSGKMAET----NAWSSWDSQHMGQ 1419 KN + EN N + GD S W GW + A T S WD + Sbjct: 1315 KNNSWENGTAANGSWEQNGSAGDDSDKWGGWNAAAVGADTAVTKQADQEKSCWDVPAAVE 1374 Query: 1420 ITVGSW------ENKDSQNCSDPSVELNAWGKGTEKNVASWETRSVKSSGGDI-WNEK-- 1572 + W + K +N + E +AW RS+ GGDI W ++ Sbjct: 1375 KSSSDWGGWGTEKRKVKENLPEEPAEHDAW----------LAKRSM--DGGDINWGKQPS 1422 Query: 1573 VTKNLEEKEGTSVWKNIS-------WRPKGNSNEDAFSLPGTLDSESSKEPWVVGARDNT 1731 ++ ++ W N+S W K DA T + +SS +++ Sbjct: 1423 ISDEFKKNVDQGSWGNMSLSAENRAWDKKKPDGGDA-----TWNKQSS-------TQNDG 1470 Query: 1732 GNSWKNGPDAAKLPKAT-TWGSSETEFDKDLNSVQNGKSYNERGKSWNSNATVDFNNQQS 1908 G++W+ P A K K + G S + + S N +++N ++ +V +N + Sbjct: 1471 GDTWEKQPSAWKENKGRGSNGGSWEKSNSQKGSWGNDEAHNNANMKQDTWGSVTAHNNDT 1530 Query: 1909 GNST 1920 N + Sbjct: 1531 QNKS 1534 >gb|EMT23234.1| DNA-directed RNA polymerase II subunit RPB1-B [Aegilops tauschii] Length = 2017 Score = 471 bits (1213), Expect = e-130 Identities = 284/689 (41%), Positives = 402/689 (58%), Gaps = 64/689 (9%) Frame = +1 Query: 1 CKEKAVYAVFNCLKKVCLKDWAREFYIEYRKQIDLPNKSETFSGLVGHVHLDKTQLKLFN 180 CKEKA AV CLK+V L+D A + IEY+KQ+ L SE VGH+HL+K L+ N Sbjct: 995 CKEKAAIAVQGCLKRVTLEDCATDICIEYKKQVSLDAISEATPAFVGHIHLEKAHLEKIN 1054 Query: 181 QNIDEILGKCQDVLFKYTKKKGQLSQFIKRVVLSVCECCNYKQPHDGDLCHFPCLQFTFV 360 + DEIL KCQ+V K+ KKG L K++ S C+C ++P DG + PCLQF+F Sbjct: 1055 VSTDEILQKCQEVSGKHANKKGTLGHLFKKITFSTCDCSFAQKPGDGKV---PCLQFSFS 1111 Query: 361 DANTAQNDESLECAIHVMAKVICPILLDTIVKGDPRVFEAKIVWIEPDATSWAANSCKTL 540 + +D S+E A++V+A +C +LL+ I+KGDPRV EAKI W+ DATSW ++ K Sbjct: 1112 EDIPMLSD-SVEKAVNVLADSLCGVLLEIIIKGDPRVQEAKITWVGSDATSWVKHTKKIS 1170 Query: 541 KGELGLEIVLEKAAVRENGDAWRMLMDACLPVMHLIDTSRSCPYGIQQNRELLGISCAFD 720 KGE +EI++EK +NGDAWR+ MDAC+PVM+LIDT RS PYGIQQ RELLGISC+FD Sbjct: 1171 KGEPAVEIIVEKKEAMQNGDAWRIAMDACIPVMNLIDTQRSIPYGIQQVRELLGISCSFD 1230 Query: 721 QAVKRLSRSIRMVSKGVMKEHLLLVANSITCTGNLVGFNTGGYKALFRSFKVQVPFTAAT 900 Q V+RLS++++ V+KG++K+HL+LVANS+TCTGNL GF+ GGY+A FRS KVQVPFT AT Sbjct: 1231 QVVQRLSKTMKTVAKGILKDHLVLVANSMTCTGNLNGFHNGGYRATFRSLKVQVPFTEAT 1290 Query: 901 LFTPMKCFETAAEKCQTDSLTSVVSSCSWGKKVAIGTGAPFQILWDKNQTAMHKDIGKGV 1080 L TPMKCFE AAEKC +DSL SVVSSCSWGK A+GTG+ FQILW++NQ +K+ G G+ Sbjct: 1291 LLTPMKCFEKAAEKCHSDSLGSVVSSCSWGKHAALGTGSSFQILWNENQLKSNKEYGDGL 1350 Query: 1081 YDFLEMLNPTLSGEATGACLADVDDIIEDQEM-EVCLSPV---ANGHMTFEENHEVEYSF 1248 YDFL ++ T +A L DVD ++ED M ++CLSP +G TFE++ E + + Sbjct: 1351 YDFLALVR-TDQEKAAYTFLDDVDYLVEDNAMDDICLSPEMDGTHGMPTFEDDPE-QQNT 1408 Query: 1249 KKNLNQENRKIENSCQDFASDFGDKSGN-------------WQGW------ESRQDSGKM 1371 +K+ + EN + + ++ G+ SGN W GW + + SG+ Sbjct: 1409 EKDSSWENGTTAGASWERNANAGNDSGNWGGGSTVENDSTDWAGWGTGPANDKKIVSGEP 1468 Query: 1372 AETNAWSSWDSQHMGQITVGSWEN-------------KDSQNC--SDPSVELNA-----W 1491 AE + W+ Q + T G W N + ++C + P+VE ++ W Sbjct: 1469 AEPDTWA---DQGAKKDTEGGWNNAAAAADTGAAKPAEQDKSCWNAPPAVENDSSGWGGW 1525 Query: 1492 GKGT--EKNVASWETRSVKSSGGDIWNEKVTKNLEEKEGTSVWKNISWRPKGNSNEDAFS 1665 G G +KN+AS + V D W ++ K + G + W + + N +D + Sbjct: 1526 GTGNAKDKNIASEGSAEV-----DTWADQSGKR-DTDGGGANWDKMKVKDH-NMQQDQWG 1578 Query: 1666 LPGTLDSESSKEPW--VVGAR--------DNTGNSWKNGPDAAKLPKAT---------TW 1788 + + ++ +PW V G D +SW G AAK +T +W Sbjct: 1579 HVPSQNVDAQDDPWGSVAGVAQPSTAKHIDAQNDSW--GSVAAKAQTSTAEPMDAGNGSW 1636 Query: 1789 GSSETEFDKDLNSVQNGKSYNERGKSWNS 1875 GS + ++Y + +SW + Sbjct: 1637 GSVAAK----------AQTYTAQQESWGN 1655 >emb|CBI40152.3| unnamed protein product [Vitis vinifera] Length = 1890 Score = 458 bits (1179), Expect = e-126 Identities = 259/664 (39%), Positives = 382/664 (57%), Gaps = 18/664 (2%) Frame = +1 Query: 1 CKEKAVYAVFNCLKKVCLKDWAREFYIEYRKQIDLPNKSETFSGLVGHVHLDKTQLKLFN 180 C+E A Y V N LKK LKD A EF IEY KQ + SE +GLVGH+HL+K L+ N Sbjct: 955 CRENAAYLVKNQLKKASLKDTAVEFMIEYVKQHAVSGSSEPGTGLVGHIHLNKLLLQDLN 1014 Query: 181 QNIDEILGKCQDVLFKYTKKKGQLSQFIKRVVLSVCECCNYKQPHDGDLCHFPCLQFTFV 360 ++ E+ KC++ + + KKK + F K+++LS ECC ++ PCL F + Sbjct: 1015 VSMQEVCQKCEETINSFRKKKN-VGPFFKKIILSFRECCTFQHSCQSKGSDMPCLLFFW- 1072 Query: 361 DANTAQNDESLECAIHVMAKVICPILLDTIVKGDPRVFEAKIVWIEPDATSWAANSCKTL 540 D++LE +H++A ICP+LL TI+KGD RV I+WI PD T+W N CK+ Sbjct: 1073 ---QGNRDDNLEQILHILAHKICPVLLQTIIKGDSRVCTVNIIWISPDTTTWIRNPCKSR 1129 Query: 541 KGELGLEIVLEKAAVRENGDAWRMLMDACLPVMHLIDTSRSCPYGIQQNRELLGISCAFD 720 KGEL L+IVLEKAAV++ GDAWR+++DACLPV+HLIDT RS PY I+Q +ELLGISCAFD Sbjct: 1130 KGELALDIVLEKAAVKQRGDAWRIVLDACLPVLHLIDTRRSIPYAIKQVQELLGISCAFD 1189 Query: 721 QAVKRLSRSIRMVSKGVMKEHLLLVANSITCTGNLVGFNTGGYKALFRSFKVQVPFTAAT 900 QAV+RLS+S+ MV+KGV+KEHL+L+ANS+TC GNL+GFN+GGYKAL R+ +QVPFT AT Sbjct: 1190 QAVQRLSKSVTMVAKGVLKEHLILLANSMTCAGNLIGFNSGGYKALSRALNLQVPFTEAT 1249 Query: 901 LFTPMKCFETAAEKCQTDSLTSVVSSCSWGKKVAIGTGAPFQILWDKNQTAMHKDIGKGV 1080 LFTP KCFE A+EKC TDSL+S+V+SCSWGK V +GTG+ F +LWD + +D G + Sbjct: 1250 LFTPRKCFEKASEKCHTDSLSSIVASCSWGKHVTVGTGSRFDVLWDTKEIGPAQDGGIDI 1309 Query: 1081 YDFLEMLNPTLSG-EATGACL-ADVDD-IIEDQEMEVCLSPVANGHMTFEENHEVEYSFK 1251 Y FL ++ G E ACL A+V+D I+ED+ +E+ +SP E +F+ Sbjct: 1310 YSFLHLVRSGSYGKEPDTACLGAEVEDLILEDENLELGMSP------------EHSSNFE 1357 Query: 1252 KNLNQENRKIENSCQDFASDFGDKSGNWQGWESRQDSGKMAETNAWSSWDSQHMGQITVG 1431 K + +++ + +N+ ++ G G+W ++++ + + +AWSSW + + Sbjct: 1358 KPVFEDSAEFQNTWENHVPGSG---GDWAVNQNKETTASTLKPSAWSSWGTDKVTMKDTF 1414 Query: 1432 SWENKDSQNCSDPSVELNAWGKGTEKNVASWETR--SVKSSGGD-------------IWN 1566 S D + S + WG +N A T S +SSG D W Sbjct: 1415 STREPDESSRSAGWDDKGTWGTDKAQNTAFRRTHEDSPRSSGRDETFRDGRPQFASSAWG 1474 Query: 1567 EKVTKNLEEKEGTSVWKNISWRPKGNSNEDAFSLPGTLDSESSKEPWVVGARDNTGNSWK 1746 +K+ + +K G W +P+ + +++ + E + + G TG+ WK Sbjct: 1475 KKIDE--ADKTG---WNKNDGKPQMDKLRESYDWDCKVAQEKTTQSTYGGISSTTGD-WK 1528 Query: 1747 NGPDAAKLPKATTWGSSETEFDKDLNSVQNGKSYNERGKSWNSNATVDFNNQQSGNSTRN 1926 + ++ S E D N ++ + W+S+ D+ ++ + + Sbjct: 1529 K--NELQMEVVQHDESPVNEHSWDANLPEDPLAQATTSVGWDSSTGKDWTKRKLQSPSEQ 1586 Query: 1927 LENP 1938 +P Sbjct: 1587 QRDP 1590 >ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera] Length = 1830 Score = 458 bits (1179), Expect = e-126 Identities = 259/664 (39%), Positives = 382/664 (57%), Gaps = 18/664 (2%) Frame = +1 Query: 1 CKEKAVYAVFNCLKKVCLKDWAREFYIEYRKQIDLPNKSETFSGLVGHVHLDKTQLKLFN 180 C+E A Y V N LKK LKD A EF IEY KQ + SE +GLVGH+HL+K L+ N Sbjct: 895 CRENAAYLVKNQLKKASLKDTAVEFMIEYVKQHAVSGSSEPGTGLVGHIHLNKLLLQDLN 954 Query: 181 QNIDEILGKCQDVLFKYTKKKGQLSQFIKRVVLSVCECCNYKQPHDGDLCHFPCLQFTFV 360 ++ E+ KC++ + + KKK + F K+++LS ECC ++ PCL F + Sbjct: 955 VSMQEVCQKCEETINSFRKKKN-VGPFFKKIILSFRECCTFQHSCQSKGSDMPCLLFFW- 1012 Query: 361 DANTAQNDESLECAIHVMAKVICPILLDTIVKGDPRVFEAKIVWIEPDATSWAANSCKTL 540 D++LE +H++A ICP+LL TI+KGD RV I+WI PD T+W N CK+ Sbjct: 1013 ---QGNRDDNLEQILHILAHKICPVLLQTIIKGDSRVCTVNIIWISPDTTTWIRNPCKSR 1069 Query: 541 KGELGLEIVLEKAAVRENGDAWRMLMDACLPVMHLIDTSRSCPYGIQQNRELLGISCAFD 720 KGEL L+IVLEKAAV++ GDAWR+++DACLPV+HLIDT RS PY I+Q +ELLGISCAFD Sbjct: 1070 KGELALDIVLEKAAVKQRGDAWRIVLDACLPVLHLIDTRRSIPYAIKQVQELLGISCAFD 1129 Query: 721 QAVKRLSRSIRMVSKGVMKEHLLLVANSITCTGNLVGFNTGGYKALFRSFKVQVPFTAAT 900 QAV+RLS+S+ MV+KGV+KEHL+L+ANS+TC GNL+GFN+GGYKAL R+ +QVPFT AT Sbjct: 1130 QAVQRLSKSVTMVAKGVLKEHLILLANSMTCAGNLIGFNSGGYKALSRALNLQVPFTEAT 1189 Query: 901 LFTPMKCFETAAEKCQTDSLTSVVSSCSWGKKVAIGTGAPFQILWDKNQTAMHKDIGKGV 1080 LFTP KCFE A+EKC TDSL+S+V+SCSWGK V +GTG+ F +LWD + +D G + Sbjct: 1190 LFTPRKCFEKASEKCHTDSLSSIVASCSWGKHVTVGTGSRFDVLWDTKEIGPAQDGGIDI 1249 Query: 1081 YDFLEMLNPTLSG-EATGACL-ADVDD-IIEDQEMEVCLSPVANGHMTFEENHEVEYSFK 1251 Y FL ++ G E ACL A+V+D I+ED+ +E+ +SP E +F+ Sbjct: 1250 YSFLHLVRSGSYGKEPDTACLGAEVEDLILEDENLELGMSP------------EHSSNFE 1297 Query: 1252 KNLNQENRKIENSCQDFASDFGDKSGNWQGWESRQDSGKMAETNAWSSWDSQHMGQITVG 1431 K + +++ + +N+ ++ G G+W ++++ + + +AWSSW + + Sbjct: 1298 KPVFEDSAEFQNTWENHVPGSG---GDWAVNQNKETTASTLKPSAWSSWGTDKVTMKDTF 1354 Query: 1432 SWENKDSQNCSDPSVELNAWGKGTEKNVASWETR--SVKSSGGD-------------IWN 1566 S D + S + WG +N A T S +SSG D W Sbjct: 1355 STREPDESSRSAGWDDKGTWGTDKAQNTAFRRTHEDSPRSSGRDETFRDGRPQFASSAWG 1414 Query: 1567 EKVTKNLEEKEGTSVWKNISWRPKGNSNEDAFSLPGTLDSESSKEPWVVGARDNTGNSWK 1746 +K+ + +K G W +P+ + +++ + E + + G TG+ WK Sbjct: 1415 KKIDE--ADKTG---WNKNDGKPQMDKLRESYDWDCKVAQEKTTQSTYGGISSTTGD-WK 1468 Query: 1747 NGPDAAKLPKATTWGSSETEFDKDLNSVQNGKSYNERGKSWNSNATVDFNNQQSGNSTRN 1926 + ++ S E D N ++ + W+S+ D+ ++ + + Sbjct: 1469 K--NELQMEVVQHDESPVNEHSWDANLPEDPLAQATTSVGWDSSTGKDWTKRKLQSPSEQ 1526 Query: 1927 LENP 1938 +P Sbjct: 1527 QRDP 1530 >ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit 1 [Solanum lycopersicum] Length = 1632 Score = 444 bits (1143), Expect = e-122 Identities = 239/517 (46%), Positives = 333/517 (64%), Gaps = 8/517 (1%) Frame = +1 Query: 1 CKEKAVYAVFNCLKKVCLKDWAREFYIEYRKQIDLPNKSETFSGLVGHVHLDKTQLKLFN 180 C+EKA Y V N L KVCLKD A EF IEY + SET +GL+GH+ L++ QL+ Sbjct: 895 CREKAAYVVKNHLSKVCLKDAADEFLIEYAGRQAGYENSETGTGLIGHIRLNQGQLENLG 954 Query: 181 QNIDEILGKCQDVLFKYTKKKGQLSQFIKRVVLSVCECCNYKQPHDGDLCHFPCLQFTFV 360 ++ E+ +CQ+ + + KKK ++ KR+VLSV E C++ + PCL+F++ Sbjct: 955 ISVLEVHERCQENISSFQKKK-KIGNLFKRIVLSVSEFCSFCHNSGSKCLNAPCLRFSWP 1013 Query: 361 DANTAQNDESLECAIHVMAKVICPILLDTIVKGDPRVFEAKIVWIEPDATSWAANSCKTL 540 DA+ D+ LE H++A +ICPILLDT++KGDPRV A I WI PD SW + K+ Sbjct: 1014 DAS----DDHLERVSHILADMICPILLDTVIKGDPRVSSANIAWISPDTMSWIRSPSKSQ 1069 Query: 541 KGELGLEIVLEKAAVRENGDAWRMLMDACLPVMHLIDTSRSCPYGIQQNRELLGISCAFD 720 +GEL L+IVLEK AV++ GDAWR+LMD+CLPV+HLIDT+RS PY I+Q +EL+GISCAF+ Sbjct: 1070 RGELALDIVLEKEAVKQRGDAWRILMDSCLPVIHLIDTTRSIPYAIKQVQELIGISCAFE 1129 Query: 721 QAVKRLSRSIRMVSKGVMKEHLLLVANSITCTGNLVGFNTGGYKALFRSFKVQVPFTAAT 900 QAVKRLS S+ MV+KGV+K+HL+L+ANS+TC GNLVGFN GG KAL RS VQ+PFT AT Sbjct: 1130 QAVKRLSTSVTMVTKGVLKDHLVLLANSMTCAGNLVGFNAGGIKALSRSLNVQIPFTEAT 1189 Query: 901 LFTPMKCFETAAEKCQTDSLTSVVSSCSWGKKVAIGTGAPFQILWDKNQTAMHKDIGKGV 1080 LFTP KCFE AAEKC DSL+S+V+SCSWGK VA+GTG+ F++L + + + V Sbjct: 1190 LFTPRKCFERAAEKCHVDSLSSIVASCSWGKHVAVGTGSRFEVLLNTRNVEWNIPDTRDV 1249 Query: 1081 YDFLEMLNPTLSGEATG-ACL-ADVDDIIEDQEMEVCLSPVANGHM---TFEENHEVEYS 1245 Y FL ++ T + E G +CL A++D++ ED++M + LSP + TFE+ E +Y Sbjct: 1250 YSFLHLVRNTSAQEVEGTSCLGAEIDELEEDEDMGLYLSPNRDSGSEMPTFEDRAEFDY- 1308 Query: 1246 FKKNLNQENRKIENSCQDFASDFGDKSGNWQGWESRQDSGK---MAETNAWSSWDSQHMG 1416 N N + K S + AS KSG + +G + ++++WS+W G Sbjct: 1309 ---NENLDEGKPSGSAWEKASSGSVKSGGSWDMAGKTQNGAEEGVNQSDSWSAW-----G 1360 Query: 1417 QITVGSWENKDSQNCSDPSVELNAWGKGTEKNVASWE 1527 + N+ + S ++WGK EK+ SW+ Sbjct: 1361 KKVDEPENNRQQSGSGEQSGSWSSWGKKVEKDGGSWD 1397 >ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max] Length = 2020 Score = 444 bits (1143), Expect = e-122 Identities = 257/663 (38%), Positives = 381/663 (57%), Gaps = 15/663 (2%) Frame = +1 Query: 1 CKEKAVYAVFNCLKKVCLKDWAREFYIEYRKQIDLPNKSETFSGLVGHVHLDKTQLKLFN 180 C+E A Y+V N L+KV LK+ A EF IEY++Q SET +GLVGH++LD+ L+ Sbjct: 899 CRENAAYSVKNQLRKVSLKNAAVEFIIEYQQQRTQKENSETDAGLVGHIYLDEMMLEELK 958 Query: 181 QNIDEILGKCQDVLFKYTKKKGQLSQFIKRVVLSVCECCNYKQPHDGDLCHFPCLQFTFV 360 ++ + KC + L +++KK +++Q++K + LS E C+ P PCL F Sbjct: 959 ISMANVFEKCLERLKSFSRKK-KVNQYLKNIELSFSESCSSSHPAA------PCLTFWLK 1011 Query: 361 DANTAQNDESLECAIHVMAKVICPILLDTIVKGDPRVFEAKIVWIEPDATSWAANSCKTL 540 + +D L+ A+ V+++ ICP+L +TI+KGDPR+ A I+W+ PD +W N K+ Sbjct: 1012 N-----HDSDLDNAVKVLSENICPVLFETIIKGDPRISSASIIWVSPDTNTWVRNPYKSS 1066 Query: 541 KGELGLEIVLEKAAVRENGDAWRMLMDACLPVMHLIDTSRSCPYGIQQNRELLGISCAFD 720 GEL L+IVLE+ AV+++GDAWR+++D+CLPV+HLIDT RS PY I+Q +ELLGISC FD Sbjct: 1067 NGELALDIVLEEEAVKQSGDAWRIVLDSCLPVLHLIDTRRSIPYAIKQIQELLGISCTFD 1126 Query: 721 QAVKRLSRSIRMVSKGVMKEHLLLVANSITCTGNLVGFNTGGYKALFRSFKVQVPFTAAT 900 QA++R++ S++MV+KGV++EHL+L+A+S+TC GNLVGFNTGGYKAL R +QVPFT AT Sbjct: 1127 QAIQRVAASVKMVAKGVLREHLILLASSMTCGGNLVGFNTGGYKALSRQLNIQVPFTDAT 1186 Query: 901 LFTPMKCFETAAEKCQTDSLTSVVSSCSWGKKVAIGTGAPFQILWDKNQTAMHKDIGKGV 1080 LFTP KCFE AAEKC TDSL+S+V+SCSWGK VA+GTG+ F I+WD ++ ++ G V Sbjct: 1187 LFTPKKCFERAAEKCHTDSLSSIVASCSWGKHVAVGTGSKFDIVWDSSEIKSNEIEGMDV 1246 Query: 1081 YDFLEMLNPTLSG-EATGACLA-DVDDIIEDQEMEVCLSPVANG--HMTFEENHEVEYSF 1248 Y FL M+ +G E T ACL D+DD++E++ M++ +SP N FEEN EV Sbjct: 1247 YSFLHMVKSVTNGEEETDACLGEDIDDLLEEEYMDLGMSPQHNSGFEAVFEENPEV---- 1302 Query: 1249 KKNLNQENRKIENSCQDFASDFGDKSGNWQGWESRQDSGK--MAETNAWSSWDSQHMGQI 1422 N N ++ K+ W GW S G+ A+ N+W +Q Sbjct: 1303 ------LNGSTSNGWDVSSNQTQSKTNEWSGWASSNKDGRSETAQENSWGKTVNQEDSSK 1356 Query: 1423 TVGSWENKDSQNCSDPSVELNAWGKGTEKNVASWETRSVK--SSGGDIWNEKVTKNLEEK 1596 + + + S E + WG + + + +++V+ SS + WN T N + K Sbjct: 1357 SNAWNTSTTADQTKTKSNEWSDWG-SNKSEIPAGGSKAVQEDSSKSNAWNTSTTSN-QTK 1414 Query: 1597 EGTSVWKNISWRPKGNSNEDAFSLPGT--LDSESSKEPWVVGARDNTGNSWKNGPDA--- 1761 + W +W SN+ G+ + +SSK N+W A Sbjct: 1415 TKSKEWS--AW----GSNKSEIPACGSKAVQEDSSK-----------SNTWNTSTTADQT 1457 Query: 1762 -AKLPKATTWGSSETEFDK-DLNSVQNGKSYNERGKSWNSNATVDFNNQQSGNSTRNLEN 1935 K + + WGS+++E +VQ S + +WN + T D T+ N Sbjct: 1458 KTKSNEWSAWGSNKSEIPAGGSKAVQEDSS---KSNAWNRSTTAD--------QTKTKSN 1506 Query: 1936 PWT 1944 W+ Sbjct: 1507 EWS 1509 >gb|ESW05756.1| hypothetical protein PHAVU_011G206900g [Phaseolus vulgaris] Length = 2052 Score = 444 bits (1141), Expect = e-122 Identities = 260/682 (38%), Positives = 390/682 (57%), Gaps = 34/682 (4%) Frame = +1 Query: 1 CKEKAVYAVFNCLKKVCLKDWAREFYIEYRKQIDLPNKSETFSGLVGHVHLDKTQLKLFN 180 C+E A Y V + L+KV LKD A EF IEY++Q SET +GLVGH++LD+ L+ Sbjct: 895 CRENAAYKVKDQLRKVNLKDAAVEFVIEYQEQRIQKGNSETDAGLVGHIYLDEMMLEELK 954 Query: 181 QNIDEILGKCQDVLFKYTKKKGQLSQFIKRVVLSVCECCNYKQPHDGDLCHFPCLQFTFV 360 ++ + KC + L ++ +K + +QF+KR LS E C+ P PCL F +V Sbjct: 955 ISMAHVFQKCLERLKSFSPRK-KANQFLKRTELSYSESCSSSHPAA------PCLTFVWV 1007 Query: 361 DANTAQNDESLECAIHVMAKVICPILLDTIVKGDPRVFEAKIVWIEPDATSWAANSCKTL 540 + + + + ++++ ICP+LL+TI++GDPR+ A I+W+ PD +W N K+ Sbjct: 1008 E----DRNNEFDYTVKILSEKICPVLLETIIQGDPRISSASIIWVTPDTNTWVRNPYKSS 1063 Query: 541 KGELGLEIVLEKAAVRENGDAWRMLMDACLPVMHLIDTSRSCPYGIQQNRELLGISCAFD 720 GEL L+I+LEK V+++GDAWR+++D+CLPV+HLIDT RS PY I+Q +ELLGISC FD Sbjct: 1064 TGELALDIILEKEVVKQSGDAWRIVLDSCLPVLHLIDTRRSIPYAIKQTQELLGISCTFD 1123 Query: 721 QAVKRLSRSIRMVSKGVMKEHLLLVANSITCTGNLVGFNTGGYKALFRSFKVQVPFTAAT 900 QA++R++ S++MV+KGV++EHL+L+A+S+TC GN+VGFNTGGYKAL R +QVPFT AT Sbjct: 1124 QAIQRVAASVKMVAKGVLREHLILLASSMTCGGNMVGFNTGGYKALSRQLNIQVPFTDAT 1183 Query: 901 LFTPMKCFETAAEKCQTDSLTSVVSSCSWGKKVAIGTGAPFQILWDKNQTAMHKDIGKGV 1080 LFTP KCFE AAEKC TDSL+S+V+SCSWGK VA+GTG+ F I+WD N+ + G V Sbjct: 1184 LFTPKKCFERAAEKCHTDSLSSIVASCSWGKPVAVGTGSKFDIVWDANKIRSSEIEGMDV 1243 Query: 1081 YDFLEML-NPTLSGEATGACLA-DVDDIIEDQEMEVCLSPVANG--HMTFEENHEVEYSF 1248 Y FL M+ T E T ACL D+DD++E++ +++ +SP N FEEN EV Sbjct: 1244 YSFLHMVKGRTDREEETDACLGEDIDDLLEEENLDLEMSPPRNSGFEAVFEENPEV---- 1299 Query: 1249 KKNLNQENRKIENSCQDFASDFGDKSGNWQGW-----ESRQDSGKMAETNAWSSWDSQHM 1413 N N +S K+ W GW E+ + A+ ++W +Q Sbjct: 1300 ------LNNSTSNGWDVNSSQTESKTNGWSGWVSNKAETNEGRSDRAQESSWGKTVTQED 1353 Query: 1414 GQITVGSWENKDSQNCSDPSVELNAWGKGTEKNVASWETRSVKSSGGDIWNEKVTKNLEE 1593 + +W + + + S E +AWG + + + + V+ S W TK++ + Sbjct: 1354 SSKS-SAWNTNTTGHTNTKSNEWSAWG-SKKSEIQAGGSEKVEGS----WGSGKTKDVTQ 1407 Query: 1594 KE--GTSVW----------KNISWRPKGNSNEDAFSLPGTLDSESSKEPWVVGARDNT-- 1731 K+ G+ W K+ W GN+N + L G SE+ ++ W G R + Sbjct: 1408 KDNFGSGAWGANKTDQAKTKSNEWSSWGNNNSEI--LAG--GSENMQDSWGSGGRKDVTQ 1463 Query: 1732 -GNSWKNGPDAAKLPKATTWGSSETEFDKDLNSVQNGKSYNERGKSWNSNATVD----FN 1896 GN +G A + + T + + + K+ + + G S N +G SW S+ D + Sbjct: 1464 EGNV-TSGAWGANVDQTKTQSNEWSGWGKNKSEIPAGGSENVQG-SWGSDKWKDGVTQVD 1521 Query: 1897 NQQSG------NSTRNLENPWT 1944 N SG + T+ N W+ Sbjct: 1522 NSASGWGGNRRDQTKAKSNEWS 1543 >gb|EEE56320.1| hypothetical protein OsJ_05410 [Oryza sativa Japonica Group] Length = 2017 Score = 444 bits (1141), Expect = e-122 Identities = 257/615 (41%), Positives = 354/615 (57%), Gaps = 17/615 (2%) Frame = +1 Query: 79 IEYRKQIDLPNKSETFSGLVGHVHLDKTQLKLFNQNIDEILGKCQDVLFKYTKKKGQLSQ 258 + Y+KQI L SE LVGH+HLD+ L+ N + ++IL KCQ+V KY KKKG LS Sbjct: 979 VRYQKQIGLDGTSEAAPALVGHIHLDRAHLERINISTEDILQKCQEVSGKYGKKKGHLSN 1038 Query: 259 FIKRVVLSVCECCNYKQPHDGDLCHFPCLQFTFVDANTAQNDESLECAIHVMAKVICPIL 438 K + S C+C ++ DG L PCLQF FV N + ES+E A+ V+A +C +L Sbjct: 1039 LFKNITFSTCDCLFTQKLVDGKLPKLPCLQF-FVSDNMIVS-ESVERAVSVLADSLCGVL 1096 Query: 439 LDTIVKGDPRVFEAKIVWIEPDATSWAANSCKTLKGELGLEIVLEKAAVRENGDAWRMLM 618 L+TI+KGDPR+ EAKIVW+ DATSW N+ K KGE +EI++E+ GDAWR M Sbjct: 1097 LNTIIKGDPRIQEAKIVWVGSDATSWVKNTQKASKGEPAVEIIVEEEEALHIGDAWRTTM 1156 Query: 619 DACLPVMHLIDTSRSCPYGIQQNRELLGISCAFDQAVKRLSRSIRMVSKGVMKEHLLLVA 798 DAC+PV++LID RS PYGIQQ RELLGISCAFDQ V+RLS ++RMV+K V+K+HL+LVA Sbjct: 1157 DACIPVLNLIDIRRSIPYGIQQVRELLGISCAFDQVVQRLSTTVRMVAKDVLKDHLVLVA 1216 Query: 799 NSITCTGNLVGFNTGGYKALFRSFKVQVPFTAATLFTPMKCFETAAEKCQTDSLTSVVSS 978 NS+T TGNL GFN GYKA FRS KVQVPFT +TL TPMKCFE AAEKC +DSL VVSS Sbjct: 1217 NSMTFTGNLNGFNNAGYKATFRSLKVQVPFTESTLITPMKCFEKAAEKCHSDSLGCVVSS 1276 Query: 979 CSWGKKVAIGTGAPFQILWDKNQTAMHKDIGKGVYDFLEMLNPTLSGEATGACLADVDDI 1158 CSWGK A GTG+ FQILW+++Q +K+ G G+YD+L ++ T +A DVD + Sbjct: 1277 CSWGKHAASGTGSSFQILWNESQLKSNKEYGDGLYDYLALVR-TDEEKARYTFFDDVDYL 1335 Query: 1159 IEDQEMEVCLSPVANGHM---TFEENHEVEYSFKKNLNQENRKIENSCQDFASDFGDKSG 1329 E+ E +VCLSP +G + F++N E E + N + +N N+ + G+ S Sbjct: 1336 AEENEADVCLSPELDGTIGQPIFDDNLE-EQDVQNNSSWDNGTTTNASWEQNGSAGNDSD 1394 Query: 1330 NWQGWE---SRQDSGKMAETNAWSS-WDSQHMGQITVGSW------ENKDSQNCSDPSVE 1479 W GW + D+G N +S WD + + W + K+ + S+ + Sbjct: 1395 KWGGWNDAAAGADTGVTKPANQGNSCWDVPATVEKSSSDWGGWGTEKAKEKEKISEEPAQ 1454 Query: 1480 LNAWG----KGTEKNVASWETRSVKSSGGDIWNEKVTKNLEEKEGTSVWKNISWRPKGNS 1647 +AW K ASW+ +S + G+ W E K G+ N G Sbjct: 1455 HDAWSVQGPKRATDGGASWKKQSSTQNDGNSWKE--NKGRGSNGGSWEKDNAQKGSWGRG 1512 Query: 1648 NEDAFSLPGTLDSESSKEPWVVGARDNTGNSWKNGPDAAKLPKATTWGSSETEFDKDLNS 1827 N++A + +++ + W A D ++ K+ + P W ++ S Sbjct: 1513 NDEAEN-----NNDVQNKSWETVAADAHASTEKSWGNVTASPSDNAWSAAPV-------S 1560 Query: 1828 VQNGKSYNERGKSWN 1872 NG S ++ SW+ Sbjct: 1561 QGNGSSDTKQSDSWD 1575 >ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max] Length = 2082 Score = 435 bits (1118), Expect = e-119 Identities = 266/680 (39%), Positives = 381/680 (56%), Gaps = 53/680 (7%) Frame = +1 Query: 1 CKEKAVYAVFNCLKKVCLKDWAREFYIEYRKQIDLPNKSETFSGLVGHVHLDKTQLKLFN 180 C+E A Y+V + L+KV LKD A EF IEY++Q SET GLVGH++LD+ L+ Sbjct: 899 CRENAAYSVKDQLRKVSLKDAAVEFIIEYQQQRTQKENSETDVGLVGHIYLDEMMLEELK 958 Query: 181 QNIDEILGKCQDVLFKYTKKKGQLSQFIKRVVLSVCECCNYKQPHDGDLCHFPCLQFTFV 360 ++ + KC + L +++KK +++Q +K + LS E C+ P PCL F Sbjct: 959 ISMAYVFDKCHERLKSFSQKK-KVNQSLKNIELSFSESCSSSHPAA------PCLTFWLK 1011 Query: 361 DANTAQNDESLECAIHVMAKVICPILLDTIVKGDPRVFEAKIVWIEPDATSWAANSCKTL 540 + D L+ A+ V+A+ ICP+L TI++GDPR+ A I+W+ PD +W N K+ Sbjct: 1012 NY-----DSDLDNAVKVLAEKICPVLFKTIIQGDPRISSASIIWVSPDTNTWVRNPYKSS 1066 Query: 541 KGELGLEIVLEKAAVRENGDAWRMLMDACLPVMHLIDTSRSCPYGIQQNRELLGISCAFD 720 GEL L+I+LEK AV+++GDAWR+++DACLPV+HLIDT RS PY I+Q +ELLGISC FD Sbjct: 1067 NGELALDIILEKEAVKQSGDAWRVVLDACLPVLHLIDTRRSIPYAIKQIQELLGISCTFD 1126 Query: 721 QAVKRLSRSIRMVSKGVMKEHLLLVANSITCTGNLVGFNTGGYKALFRSFKVQVPFTAAT 900 QA++R++ S++MV+KGV++EHL+L+A+S+TC GNLVGFN GGYKAL R +QVPFT AT Sbjct: 1127 QAIQRVAASVKMVAKGVLREHLILLASSMTCGGNLVGFNIGGYKALSRQLNIQVPFTDAT 1186 Query: 901 LFTPMKCFETAAEKCQTDSLTSVVSSCSWGKKVAIGTGAPFQILWDKNQTAMHKDIGKGV 1080 LFTP KCFE AAEKC TDSL+S+V+SCSWGK VA+GTG+ F ++WD N+ ++ G V Sbjct: 1187 LFTPKKCFERAAEKCHTDSLSSIVASCSWGKHVAVGTGSKFDVVWDANEIKSNEIEGMDV 1246 Query: 1081 YDFLEMLNPTLSG-EATGACLA-DVDDIIEDQEMEVCLSPVANG--HMTFEENHEVEYSF 1248 Y FL M+ +G E T ACL D+DD++E++ M++ +SP N FEEN EV Sbjct: 1247 YSFLHMVKSFTNGEEETDACLGEDIDDLLEEEYMDLGMSPQHNSGFEAVFEENPEV---- 1302 Query: 1249 KKNLNQENRKIENSCQDFASDFGD-KSGNWQGWES------------------------R 1353 LN ++ D +S+ G+ K+ W GW S + Sbjct: 1303 ---LNGST----SNGWDVSSNQGESKTNEWSGWASSNKAEIKDGRSEIAPKNSWGKTVNQ 1355 Query: 1354 QDSGK-------------MAETNAWSSWDSQHMGQITVGSWENKDSQNCSD---PSVELN 1485 +DS K ++N WS+W S + +I VG W + + D + + N Sbjct: 1356 EDSSKSNPWSTSTIADQTKTKSNEWSAWGS-NKSEIPVG-WASSNKTEIKDGRSETAQEN 1413 Query: 1486 AWGKGTEKNVASWETRSVKSSGGDIWNEKVT---KNLEEKEGTSVWKNISWRPKGNS--- 1647 +WGK + SS + WN T N + E ++ N S P G S Sbjct: 1414 SWGKTVNQE---------DSSKSNAWNTSTTVDHANTKSNEWSAWGSNQSEIPAGGSKAV 1464 Query: 1648 NEDAFSLPGTLDSESSKEPWVVGARDNTG-NSW-KNGPDAAKLPKATTWGSSETEFDKDL 1821 ED++ SSK V DN+ +W N D K + + WG + +D Sbjct: 1465 QEDSWG--------SSKWKADVAQEDNSRLGAWDANAADQTKSSEWSGWGKKKDVTQED- 1515 Query: 1822 NSVQNGKSYNERGKSWNSNA 1881 N R +W++NA Sbjct: 1516 ---------NSRLGAWDANA 1526 >ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Fragaria vesca subsp. vesca] Length = 1991 Score = 429 bits (1102), Expect = e-117 Identities = 253/618 (40%), Positives = 353/618 (57%), Gaps = 16/618 (2%) Frame = +1 Query: 1 CKEKAVYAVFNCLKKVCLKDWAREFYIEYRKQIDLPNKSETFSGLVGHVHLDKTQLKLFN 180 C+E A Y V N LKKV LKD A EF IEY+K+ E SGLVGHVHL++ L+ N Sbjct: 894 CREHAAYLVKNRLKKVSLKDTAVEFMIEYQKE-RAAGSMEIDSGLVGHVHLNEMLLRELN 952 Query: 181 QNIDEILGKCQDVLFKYTKKKG----QLSQFIKRVVLSVCECCNYKQPHDGDLCHFPCLQ 348 + EIL KC++ + + +KK + + KR +LS ECC++ Q + PCL Sbjct: 953 LGMSEILQKCEETINSFRRKKVGKKMNIGEIFKRTILSYSECCSFHQSSADNRSGSPCLM 1012 Query: 349 FTFVDANTAQNDESLECAIHVMAKVICPILLDTIVKGDPRVFEAKIVWIEPDATSWAANS 528 F + D N ++ LE ++A ICP+LL T++KGDPR+ A I+WI ++T+W + Sbjct: 1013 FFYQDFNNSE----LEAISQMLADFICPVLLKTVIKGDPRISSANIIWINSESTTWIRSP 1068 Query: 529 CKTLKGELGLEIVLEKAAVRENGDAWRMLMDACLPVMHLIDTSRSCPYGIQQNRELLGIS 708 K+LKGEL L++VLEK+ V+++GDAWR+ +D CLPV+HLIDT RS PY I+Q +ELLG+S Sbjct: 1069 NKSLKGELALDVVLEKSVVKQSGDAWRIALDCCLPVLHLIDTRRSIPYAIKQVQELLGVS 1128 Query: 709 CAFDQAVKRLSRSIRMVSKGVMKEHLLLVANSITCTGNLVGFNTGGYKALFRSFKVQVPF 888 CAFDQAV+RL++++ MV+KGV+KEHL+L+ANS+TC GN VGFN GGYKAL R+ +QVPF Sbjct: 1129 CAFDQAVQRLAKAVAMVAKGVLKEHLILLANSMTCAGNFVGFNPGGYKALSRALNIQVPF 1188 Query: 889 TAATLFTPMKCFETAAEKCQTDSLTSVVSSCSWGKKVAIGTGAPFQILWDKNQTAMHKDI 1068 T ATLFTP KCFE AAEKC DSL+S+V+SCSWGK VA+GTG+ F+ILWD + +++ Sbjct: 1189 TEATLFTPKKCFERAAEKCHMDSLSSIVASCSWGKHVAVGTGSRFEILWDTKEGGLNEVG 1248 Query: 1069 GKGVYDFLEMLNPTLSGEATGACL-ADVDDIIEDQEM-EVCLSPVANGHM---TFEENHE 1233 G V++FL M+N E T A L ++DD++ D E +V LSP N FE+ E Sbjct: 1249 GVDVFNFLHMVNAANGEELTTAALGTEIDDLVPDYENGDVSLSPEHNSSSDKPVFEDIVE 1308 Query: 1234 VEYSFKKNLNQENRKIENSCQDFASDFGDKSGNWQGWESRQDSGKMAETNA--WSSWDSQ 1407 +F+ N + +S + + G K +W + G AET A S+W + Sbjct: 1309 FPDNFE---NVPGKSSWDSI--YTASTGGK--DWGAVKIGTQDGISAETQADSTSAWGIK 1361 Query: 1408 HMGQITVGSWENKDSQNCSDPSVELNAWGKGTEKNVA--SWETRSVKSSGGDIWNEKVTK 1581 + W + PS AWG T K A +W ++ + W T Sbjct: 1362 TPREDDTSPWGTAKTATEDAPS----AWGTKTVKEDAPSAWGIKTAREDARSPWGTAKTA 1417 Query: 1582 NLEEKEGTSVWKNIS-WRPKGNSNEDAFSLPGTLD-SESSKEPW-VVGARDNTGNSWKNG 1752 + T+ S W + DA S GT E + W R++ + W Sbjct: 1418 TEDASSATAREDAPSPWGTAKTATGDALSAWGTKTLKEDAPSAWGTKTVREDAPSPWGTA 1477 Query: 1753 PDAAKLPKATTWGSSETE 1806 A + A S TE Sbjct: 1478 KRATEDAPAAWGAKSATE 1495 >ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Citrus sinensis] Length = 1865 Score = 428 bits (1101), Expect = e-117 Identities = 268/674 (39%), Positives = 381/674 (56%), Gaps = 46/674 (6%) Frame = +1 Query: 1 CKEKAVYAVFNCLKKVCLKDWAREFYIEYRKQIDLPNKSETFSGLVGHVHLDKTQLKLFN 180 C+E+A Y V N LK+V LKD A EF IEY+K P GLVGH+HL+K L+ Sbjct: 894 CQERAAYMVKNQLKRVSLKDAAVEFLIEYKK----PEIISDDEGLVGHIHLNKILLEDLR 949 Query: 181 QNIDEILGKCQDVLFKYTKKKG--QLSQFIKRVVLSVCECCNYKQPHDGDLCHFPCLQFT 354 ++ +IL KCQ+ L + KKK ++ QF K LSV ECC+++Q + PCL F Sbjct: 950 ISMHDILPKCQETLKSFCKKKKMKKVVQFFKNTSLSVSECCSFQQSCADKRSNMPCLMFV 1009 Query: 355 FVDANTAQNDESLECAIHVMAKVICPILLDTIVKGDPRVFEAKIVWIEPDATSWAANSCK 534 A+ D L+ V+A +I P+LL+TI+KGDPR++ A I+WI PD T+W N K Sbjct: 1010 LRGAS----DSYLDKLSGVLANMIYPVLLETIIKGDPRIYSANIIWISPDTTAWIRNPSK 1065 Query: 535 TLKGELGLEIVLEKAAVRENGDAWRMLMDACLPVMHLIDTSRSCPYGIQQNRELLGISCA 714 KGEL L++VLEK+ V+++GDAWR ++D+CLPV HLIDT RS PY I+Q +ELLG+SCA Sbjct: 1066 NRKGELALDVVLEKSVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPYAIKQVQELLGVSCA 1125 Query: 715 FDQAVKRLSRSIRMVSKGVMKEHLLLVANSITCTGNLVGFNTGGYKALFRSFKVQVPFTA 894 F+QAV+RLS S+ MV+KGV+KEHL+L+ANS+TC G+LVGFN+GGYKAL RS VQVPFT Sbjct: 1126 FEQAVQRLSASVTMVAKGVLKEHLILLANSMTCAGDLVGFNSGGYKALSRSLNVQVPFTE 1185 Query: 895 ATLFTPMKCFETAAEKCQTDSLTSVVSSCSWGKKVAIGTGAPFQILWDKNQTAMHKDIGK 1074 ATLFTP KCFE AAEKC TD+L+SVV++CSWGK VA+GTG+ F +LW ++D G Sbjct: 1186 ATLFTPRKCFEKAAEKCHTDNLSSVVAACSWGKHVAVGTGSRFDLLWQTENEEFNQDDGV 1245 Query: 1075 GVYDFLEML-NPTLSGEATGACLADVDDIIEDQEMEVCLSP---VANGHMTFEENHEVEY 1242 VYDFL M+ + T E+ CL + D +ED E + LSP + + FE+ E + Sbjct: 1246 DVYDFLHMVRSSTGIEESDTGCLGEEVDGLED-EFDWSLSPEHNLCSDKPVFEDLVEDQS 1304 Query: 1243 SFKKNLNQENRKIENSCQDFASDFGDKSGN-----WQGWESRQDSGKMAE---------T 1380 + N E C+ + D +K G GW + GK ++ + Sbjct: 1305 WLENKQENANWDSEADCRKSSEDKWEKLGTSLEKPSSGWRTEGAWGKSSDDKLEKAGSPS 1364 Query: 1381 NAWSSWDSQ-HMGQITVGSWENKDS---QNCSDPSVELNAWGK--GTEKNVASWETRSVK 1542 S W ++ G+ + WEN S ++ S+ E +WGK G + S ++ Sbjct: 1365 RKPSGWGTEASWGESSCDKWENVGSPAAKSFSEWGTEA-SWGKSFGDKPENVSPAAKTSS 1423 Query: 1543 SSGGDIWNEKVTKNLEEKEGTSVWKNIS-WRPK---GNSNEDAFSLPGTLDSESS----- 1695 G + K + + +E G S K +S W K G S+ED T ++ S Sbjct: 1424 GWGSEASWGKSSGDRQENVGGSASKPLSGWGAKASWGKSSEDKLEEVETTVAKPSSAWGT 1483 Query: 1696 KEPW----------VVGARDNTGNSWKNGPDAAKLPKATTWGSSETEFDKDLNSVQN-GK 1842 + W V +N + W G +A K++ W +E+ N+ + G+ Sbjct: 1484 EASWDKSSEVTLEKVAAPAENPLSGW--GTEAQDSGKSSDW----SEWKDHANATASWGR 1537 Query: 1843 SYNERGKSWNSNAT 1884 + +E W++ A+ Sbjct: 1538 NGSEENSGWDTKAS 1551 >ref|XP_006411250.1| hypothetical protein EUTSA_v10016128mg [Eutrema salsugineum] gi|557112419|gb|ESQ52703.1| hypothetical protein EUTSA_v10016128mg [Eutrema salsugineum] Length = 1874 Score = 428 bits (1100), Expect = e-117 Identities = 248/652 (38%), Positives = 372/652 (57%), Gaps = 50/652 (7%) Frame = +1 Query: 1 CKEKAVYAVFNCLKKVCLKDWAREFYIEYRKQIDLPNKSETFSGLVGHVHLDKTQLKLFN 180 C+E A Y V N LKKV LK+ A EF +EYRKQ + S L GH+HL+KT L+ +N Sbjct: 891 CQENAAYTVRNKLKKVSLKETAVEFLVEYRKQQAISEIFGNDSSLRGHIHLNKTLLQEWN 950 Query: 181 QNIDEILGKCQDVLFKYTKKKGQLSQFIKRVVLSVCECCNYKQPHDGDLCHFPCLQFTFV 360 ++ +IL KC+D + +KK + + KR LS ECC+++ P PCL F+ Sbjct: 951 ISMQDILQKCEDAINSLVQKKKKKADDFKRTNLSFSECCSFRDPCASKDSDMPCLMFSSY 1010 Query: 361 DANTAQNDESLECAIHVMAKVICPILLDTIVKGDPRVFEAKIVWIEPDATSWAANSCKTL 540 +A D LE + V+ I P+LL+T++KGDPR+F A I W P+ T+W N + Sbjct: 1011 NAT----DPDLERTLDVLCHTIYPVLLETVIKGDPRIFSANITWNSPETTTWIWNRHASR 1066 Query: 541 KGELGLEIVLEKAAVRENGDAWRMLMDACLPVMHLIDTSRSCPYGIQQNRELLGISCAFD 720 +GE L++ +EK+AV+++GDAWR++MD+CL V+HLIDT+RS PY I+Q +ELLG+SCAF+ Sbjct: 1067 RGEWVLDVTVEKSAVKQSGDAWRVVMDSCLSVLHLIDTTRSIPYSIKQVQELLGLSCAFE 1126 Query: 721 QAVKRLSRSIRMVSKGVMKEHLLLVANSITCTGNLVGFNTGGYKALFRSFKVQVPFTAAT 900 QAV+RLS S+RMVSKGV+KEH++LVAN++TC+GN++GFN+GGYKAL RS ++ PFT AT Sbjct: 1127 QAVQRLSASVRMVSKGVLKEHIILVANNMTCSGNMLGFNSGGYKALTRSLNIKAPFTEAT 1186 Query: 901 LFTPMKCFETAAEKCQTDSLTSVVSSCSWGKKVAIGTGAPFQILWDKNQTAMHKDIGKGV 1080 L TP KCFE AAEKC TDSL++VV SCSWGK+V +GTG+ F++LW+K +T + + V Sbjct: 1187 LITPRKCFEKAAEKCHTDSLSTVVGSCSWGKRVDVGTGSKFELLWNKKETGLENENETDV 1246 Query: 1081 YDFLEMLNPTLSGEATGACLADVDDIIEDQEMEVCLSP---VANGHMTFEENHEVEYSFK 1251 Y FL+M+ T + +A + + D+ E+ E SP A G + FE++ E + Sbjct: 1247 YSFLQMVRSTTNADAYAS--SPGFDVTEEDMAEWAESPERDSALGELKFEDSAEFQ---- 1300 Query: 1252 KNLNQENRKIEN---------SCQDFASDFG---DKSGNWQ------------GWESRQD 1359 N++ E + E+ S D + + G + W+ GW S++D Sbjct: 1301 -NIHDEGKPSESKWDNGFSGGSEWDLSRNTGGEENPQSGWEKTTNVEKEDASSGWNSKKD 1359 Query: 1360 SGKMAETNAWSSWDSQHMGQ--ITVGSWENKDSQNCS------DPSVEL--------NAW 1491 + + + +++W +W S+ T SWE + +Q S +PSV++ W Sbjct: 1360 AQESSRSDSWRAWGSKPKDNDANTTPSWETRPAQKDSMVIENNEPSVDVWGPKSVSEKVW 1419 Query: 1492 GK---GTEKNVASWETRSVKSSGGDI----WNEKVTKNLEEKEGTSVWKNISWRPKGNSN 1650 K TE A+W +R K+S ++ W N E + + W ++ + Sbjct: 1420 KKKNSKTESAPAAWVSRDKKNSETELDASAWGFGDKVNKETETDAAAW-GAGYKMNKETE 1478 Query: 1651 EDAFSLPGTLDSESSKEPWVVGARDNTGNSWKNGPDAAKLPKATTWGSSETE 1806 A+ G SE+ G R+NT + ++G A WG T+ Sbjct: 1479 SAAWGSWGEKRSETESGDAGWGFRNNTNSKVESG--------AGAWGPQPTK 1522 >ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis sativus] Length = 1959 Score = 426 bits (1096), Expect = e-116 Identities = 242/572 (42%), Positives = 342/572 (59%), Gaps = 7/572 (1%) Frame = +1 Query: 1 CKEKAVYAVFNCLKKVCLKDWAREFYIEYRKQIDLPNKSETFSGLVGHVHLDKTQLKLFN 180 C E A Y V + LKKV LKD A +F IEY +Q P S GLVGHVHL++ LK N Sbjct: 896 CNENAAYVVKSHLKKVTLKDAAMDFMIEYNRQ---PTPSGLGPGLVGHVHLNRMLLKELN 952 Query: 181 QNIDEILGKCQDVLFKYTKKKGQLSQFIKRVVLSVCECCNYKQPHDGDLCHFPCLQFTFV 360 ++ E+L +CQ+ + + KKK +++ ++ S+ E C + Q + + PCL F Sbjct: 953 IDMTEVLRRCQETMSSFKKKKKKIAHALR---FSISEHCAFHQWNGEESIDMPCLIFWH- 1008 Query: 361 DANTAQNDESLECAIHVMAKVICPILLDTIVKGDPRVFEAKIVWIEPDATSWAANSCKTL 540 D LE H++A ++ P+L +TI+KGDPR+ A ++WI PD+TSW N + Sbjct: 1009 ----QTRDVHLERTAHILADIVFPLLSETIIKGDPRIKSASVIWISPDSTSWQKNPSRWQ 1064 Query: 541 KGELGLEIVLEKAAVRENGDAWRMLMDACLPVMHLIDTSRSCPYGIQQNRELLGISCAFD 720 GEL L++ LEK+AV++NGDAWR ++D CLPV+HLIDT RS PY I+Q +ELLGISCAFD Sbjct: 1065 DGELALDVCLEKSAVKQNGDAWRNVLDCCLPVLHLIDTRRSVPYAIKQVQELLGISCAFD 1124 Query: 721 QAVKRLSRSIRMVSKGVMKEHLLLVANSITCTGNLVGFNTGGYKALFRSFKVQVPFTAAT 900 Q ++RLS+S+ MVSKGV+ +HL+L+ANS+TCTGN++GFN+GGYKAL R+ +QVPFT AT Sbjct: 1125 QMIQRLSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFNSGGYKALSRALNIQVPFTEAT 1184 Query: 901 LFTPMKCFETAAEKCQTDSLTSVVSSCSWGKKVAIGTGAPFQILWDKNQTAMHKDIGKGV 1080 LFTP KCFE AAEKC DSL+S+V+SCSWGK VA+GTG+ F ILWD+ + +D V Sbjct: 1185 LFTPRKCFEKAAEKCHKDSLSSIVASCSWGKHVAVGTGSRFDILWDQKELGCKQDDVVDV 1244 Query: 1081 YDFLEMLNPTLSGEATGACLA-DVDDI-IEDQEMEVCLSP---VANGHMTFEENHEVEYS 1245 Y+FL M+ S E T ACL +++DI +ED+ E+ LSP + FE++ E E+ Sbjct: 1245 YNFLHMVRSGKSEEPTSACLGEEIEDIMVEDEYGELTLSPEPFSTSEKPVFEDSAEFEHC 1304 Query: 1246 FKKNLNQENRKIENSCQDFASDFGDKSGNWQGWESRQD--SGKMAETNAWSSWDSQHMGQ 1419 +N E+ + A G S WES ++ + ++ N WS W + Sbjct: 1305 L------DNYPGESKWEK-APSLGAVSTGGGQWESNENGKATNSSDGNDWSGWGRKAEPD 1357 Query: 1420 ITVGSWENKDSQNCSDPSVELNAWGKGTEKNVASWETRSVKSSGGDIWNEKVTKNLEEKE 1599 +TV + + S +AW +SW ++ SS + W+ TK +E Sbjct: 1358 VTVTNAQENTSN---------SAW-----DTTSSWGNKATNSSNDNDWSNCSTKEVERDS 1403 Query: 1600 GTSVWKNISWRPKGNSNEDAFSLPGTLDSESS 1695 TS+ K PK + D+ S GT + S Sbjct: 1404 FTSMEKT----PK-SGGWDSASTWGTKTKDDS 1430 >gb|AAY89359.1| RNA polymerase IV largest subunit [Solanum lycopersicum] Length = 1127 Score = 426 bits (1095), Expect = e-116 Identities = 234/513 (45%), Positives = 324/513 (63%), Gaps = 8/513 (1%) Frame = +1 Query: 1 CKEKAVYAVFNCLKKVCLKDWAREFYIEYRKQIDLPNKSETFSGLVGHVHLDKTQLKLFN 180 C+EKA Y V N L KVCLKD A EF IEY + SET +GL+GH+ L++ QL+ Sbjct: 446 CREKAAYVVKNHLSKVCLKDAADEFLIEYAGRQAGYENSETGTGLIGHIRLNQGQLENLG 505 Query: 181 QNIDEILGKCQDVLFKYTKKKGQLSQFIKRVVLSVCECCNYKQPHDGDLCHFPCLQFTFV 360 ++ E+ +CQ+ + + KK ++ KR+VLSV E C++ + PCL+F++ Sbjct: 506 ISVLEVHERCQENISSFRXKK-KIGNLFKRIVLSVSEFCSFCHNSGSKCLNAPCLRFSWP 564 Query: 361 DANTAQNDESLECAIHVMAKVICPILLDTIVKGDPRVFEAKIVWIEPDATSWAANSCKTL 540 DA+ D+ LE H++A +I PILLDT++KGDPRV A I WI PD SW + K+ Sbjct: 565 DAS----DDHLERVSHILADMIXPILLDTVIKGDPRVSSANIAWISPDTMSWIRSPSKSQ 620 Query: 541 KGELGLEIVLEKAAVRENGDAWRMLMDACLPVMHLIDTSRSCPYGIQQNRELLGISCAFD 720 +GEL L+IVLEK AV+ GDAWR LMD+CLPV+HLIDT+RS PY I+Q +EL+GISCAF+ Sbjct: 621 RGELALDIVLEKEAVKXRGDAWRXLMDSCLPVIHLIDTTRSIPYAIKQVQELIGISCAFE 680 Query: 721 QAVKRLSRSIRMVSKGVMKEHLLLVANSITCTGNLVGFNTGGYKALFRSFKVQVPFTAAT 900 QAV RLS S+ MV+KGV+K+HL+L+ANS+TC GNLVGFN GG KAL RS VQ+PFT AT Sbjct: 681 QAVXRLSTSVTMVTKGVLKDHLVLLANSMTCAGNLVGFNAGGIKALSRSLNVQIPFTEAT 740 Query: 901 LFTPMKCFETAAEKCQTDSLTSVVSSCSWGKKVAIGTGAPFQILWDKNQTAMHKDIGKGV 1080 LFTP KCFE AAEKC DSL+S+V+SCSWGK VA+GTG+ F++L + + + V Sbjct: 741 LFTPRKCFERAAEKCHVDSLSSIVASCSWGKHVAVGTGSRFEVLLNTRNVEWNIPDTRDV 800 Query: 1081 YDFLEMLNPTLSGEATG-ACL-ADVDDIIEDQEMEVCLSPVANGHM---TFEENHEVEYS 1245 Y FL ++ T + E G +CL A++D++ ED++M + LSP + TFE+ E +Y Sbjct: 801 YSFLHLVRNTSAQEVEGTSCLGAEIDELEEDEDMGLYLSPNRDSGSEMPTFEDRAEFDY- 859 Query: 1246 FKKNLNQENRKIENSCQDFASDFGDKSGNWQGWESRQDSGK---MAETNAWSSWDSQHMG 1416 N N + K S + AS KSG + +G + ++++WSSW G Sbjct: 860 ---NENLDEGKPSGSAWEEASSGSVKSGGSWDMAGKTQNGAEEGVNQSDSWSSW-----G 911 Query: 1417 QITVGSWENKDSQNCSDPSVELNAWGKGTEKNV 1515 + N+ + S + WG+ +K V Sbjct: 912 KKVDEPENNRQQSGSGEQSGSWSPWGRRWKKMV 944 >ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citrus clementina] gi|557522591|gb|ESR33958.1| hypothetical protein CICLE_v10004129mg [Citrus clementina] Length = 1867 Score = 424 bits (1089), Expect = e-115 Identities = 271/696 (38%), Positives = 383/696 (55%), Gaps = 49/696 (7%) Frame = +1 Query: 1 CKEKAVYAVFNCLKKVCLKDWAREFYIEYRKQIDLPNKSETFSGLVGHVHLDKTQLKLFN 180 C+E+A Y V N LK+V LKD A EF IEY+K P GLVGH+HL+K L+ Sbjct: 895 CQERAAYMVKNQLKRVSLKDAAVEFLIEYKK----PEIISDDEGLVGHIHLNKILLEDLR 950 Query: 181 QNIDEILGKCQDVLFKYTKKKG--QLSQFIKRVVLSVCECCNYKQPHDGDLCHFPCLQFT 354 ++ +IL KCQ+ L + KKK ++ QF K LS+ ECC+++Q + PCL F Sbjct: 951 ISMHDILPKCQETLKSFCKKKKMKKVVQFFKNTSLSISECCSFQQSCADKRSNMPCLMFV 1010 Query: 355 FVDANTAQNDESLECAIHVMAKVICPILLDTIVKGDPRVFEAKIVWIEPDATSWAANSCK 534 A+ D L+ V+A +I P+LL+TI+KGDPR+ A I+WI PD T+W N K Sbjct: 1011 LRGAS----DSYLDKLSGVLANMIYPVLLETIIKGDPRICSANIIWISPDTTAWIRNPSK 1066 Query: 535 TLKGELGLEIVLEKAAVRENGDAWRMLMDACLPVMHLIDTSRSCPYGIQQNRELLGISCA 714 KGEL L++VLEK+ V+++GDAWR ++D+CLPV HLIDT RS PY I+Q +ELLG+SCA Sbjct: 1067 NRKGELALDVVLEKSVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPYAIKQVQELLGVSCA 1126 Query: 715 FDQAVKRLSRSIRMVSKGVMKEHLLLVANSITCTGNLVGFNTGGYKALFRSFKVQVPFTA 894 F+QAV+RLS S+ MV+KGV+KEHL+L+ANS+TC G+LVGFN+GGYKAL RS VQVPFT Sbjct: 1127 FEQAVQRLSASVTMVAKGVLKEHLILLANSMTCAGDLVGFNSGGYKALSRSLNVQVPFTE 1186 Query: 895 ATLFTPMKCFETAAEKCQTDSLTSVVSSCSWGKKVAIGTGAPFQILWDKNQTAMHKDIGK 1074 ATLF P KCFE AAEK TD+L+SVV++CSWGK VA+GTG+ F +LW ++D G Sbjct: 1187 ATLFMPRKCFEKAAEKRHTDNLSSVVAACSWGKHVAVGTGSRFDLLWQTENEEFNQDDGV 1246 Query: 1075 GVYDFLEML-NPTLSGEATGACLADVDDIIEDQEMEVCLSP---VANGHMTFEENHEVEY 1242 VYDFL M+ + T E CL + D +ED E + LSP + + FE+ E + Sbjct: 1247 DVYDFLHMVRSSTGIEELDTGCLGEEVDGLED-EFDWSLSPEHNLCSDKPIFEDLVEDQS 1305 Query: 1243 SFKKNLNQENRKIENSCQDFASDFGDKSGN-----WQGWESRQDSGKMAE---------T 1380 + EN E C+ + D +K G GW + GK ++ + Sbjct: 1306 WLENKQENENWDSEADCRKSSEDKWEKLGTSLEKPSSGWRTEGAWGKSSDDKLEKAGSPS 1365 Query: 1381 NAWSSWDSQ-HMGQITVGSWENKDS---QNCSDPSVELNAWGKG---TEKNVASWETRSV 1539 S W ++ G+ + WEN S ++ S+ E +WGK +NV S ++ Sbjct: 1366 RKPSGWGTEASWGESSSDKWENVGSPAAKSFSEWGTEA-SWGKSFGDKPENVRSPAAKTS 1424 Query: 1540 KSSGGDIWNEKVTKNLEEKEGTSVWKNIS-WRPK---GNSNEDAFSLPGTLDSESS---- 1695 G + K + +E G S K +S W K G S+ED T ++ S Sbjct: 1425 SGWGSEASWGKSPGDRQENVGRSASKPLSGWGAKASWGKSSEDKLEEVETTVAKPSSAWG 1484 Query: 1696 -KEPW----------VVGARDNTGNSWKNGPDAAKLPKATTWGSSETEFDKDLNSVQNGK 1842 + W V +N + W G +A K++ W + + + +NG Sbjct: 1485 TEASWDKSSEVTLEKVAAPAENPLSGW--GTEAQDSGKSSDWSEWKDHANATASWGRNGS 1542 Query: 1843 SYN---ERGKSWNSNATVDFNNQQSGNSTRNLENPW 1941 N + SWN+ A ++ G++ N + W Sbjct: 1543 EENSGWDTKASWNTKALDKLDD--VGSAVENSSSVW 1576 >ref|XP_002879839.1| NRPD1b [Arabidopsis lyrata subsp. lyrata] gi|297325678|gb|EFH56098.1| NRPD1b [Arabidopsis lyrata subsp. lyrata] Length = 1947 Score = 421 bits (1082), Expect = e-115 Identities = 259/687 (37%), Positives = 388/687 (56%), Gaps = 40/687 (5%) Frame = +1 Query: 1 CKEKAVYAVFNCLKKVCLKDWAREFYIEYRKQIDLPNKSETFSGLVGHVHLDKTQLKLFN 180 C+E A Y V N LKKV LKD A EF +EYRKQ + S L GH+HLDKT L+ +N Sbjct: 891 CQENAAYTVRNKLKKVSLKDTAVEFLVEYRKQQTISEIFGIDSCLHGHIHLDKTLLQDWN 950 Query: 181 QNIDEILGKCQDVLFKY-TKKKGQLSQFIKRVVLSVCECCNYKQPHDGDLCHFPCLQFTF 357 ++ +IL KC+DV+ KKK + + KR LSV ECC+++ P PCL F++ Sbjct: 951 ISMQDILQKCEDVINSLGQKKKKKATDDFKRTSLSVSECCSFQDPCGRKDSDMPCLMFSY 1010 Query: 358 VDANTAQNDESLECAIHVMAKVICPILLDTIVKGDPRVFEAKIVWIEPDATSWAANSCKT 537 + D LE + V+ I P+LL+T++KGDPR+ A I+W D T+W N + Sbjct: 1011 -----SATDPDLERTLDVLCNTIYPVLLETVIKGDPRICSANIIWNSSDMTTWIRNCHAS 1065 Query: 538 LKGELGLEIVLEKAAVRENGDAWRMLMDACLPVMHLIDTSRSCPYGIQQNRELLGISCAF 717 +GE L++ +EK+AV+++GDAWR+++DACL V+HLIDT RS PY I+Q +ELLG+SCAF Sbjct: 1066 RRGEWVLDVTVEKSAVKQSGDAWRVVIDACLSVLHLIDTKRSIPYSIKQVQELLGLSCAF 1125 Query: 718 DQAVKRLSRSIRMVSKGVMKEHLLLVANSITCTGNLVGFNTGGYKALFRSFKVQVPFTAA 897 +QAV+RLS S+RMVSKGV+KEH++L+AN++TC+GN++GFN+GGYKAL RS ++ PFT A Sbjct: 1126 EQAVQRLSASVRMVSKGVLKEHIILLANNMTCSGNMLGFNSGGYKALTRSLNIKAPFTEA 1185 Query: 898 TLFTPMKCFETAAEKCQTDSLTSVVSSCSWGKKVAIGTGAPFQILWDKNQTAMHKDIGKG 1077 TL TP +CFE AAEKC TDSL++VV SCSWGK+V +GTG+ F++LW++ +T + Sbjct: 1186 TLITPRRCFEKAAEKCHTDSLSTVVGSCSWGKRVDVGTGSQFELLWNQKETGLDDKEETD 1245 Query: 1078 VYDFLEMLNPTLSGEATGACLADVDDIIEDQEMEVCLSP---VANGHMTFEENHEVEYSF 1248 VY FL+M+ T + +A + + D+ E++ E SP A G FE++ E + Sbjct: 1246 VYSFLQMVRSTTNADAYVS--SPGFDVTEEEMAEWAESPERDSALGEPKFEDSAEFQ--- 1300 Query: 1249 KKNLNQENRKIENSCQDFAS-DFGDKSGN-W-----QGWESRQDSGKMAETN-----AWS 1392 NL+ E + E++ + +S D G G+ W G E+ +S TN AWS Sbjct: 1301 --NLHDEGKPSESNWEKSSSWDNGCSGGSEWGVSKNTGGEANPESNWEKTTNVEKEDAWS 1358 Query: 1393 SWDSQHMGQITVGSWENKDSQNCSDPSVELNAWGKGTEKNVA----SWETRSVKSSG--- 1551 SW+++ KD+Q S + AWG T+ + A +WETR ++ Sbjct: 1359 SWNTK------------KDAQESSKSDSGV-AWGLKTKDDDADTTPNWETRPAQTDSIVP 1405 Query: 1552 ------GDIWNEK--VTKNLEEKEGTSVWKNISWRPKGNSNEDAFSLPGTLDSESSKEPW 1707 D+W K K+ ++K G + +W G+++ + +SE+ + Sbjct: 1406 ENNEPTSDVWGHKSGSDKSWDKKNGGTESAPAAW---GSTDAAVWGSSDKKNSETESDAA 1462 Query: 1708 VVGARDNTGNSWKN-----GPDAAKLPK----ATTWGSSETEFDKDLNSVQNGKSYNERG 1860 G+RD + + GP K K TWGSS DK + S++++ Sbjct: 1463 AWGSRDKKNSEVGSGAGVLGPWNKKSSKTESDGATWGSS----DKTKSGAAAWSSWDKKN 1518 Query: 1861 KSWNSNATVDFNNQQSGNSTRNLENPW 1941 +S + ++ T + + W Sbjct: 1519 METDSEPAAWGSQSKNKPETESGPSTW 1545 >gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinacia oleracea] Length = 1902 Score = 417 bits (1072), Expect = e-114 Identities = 261/685 (38%), Positives = 353/685 (51%), Gaps = 40/685 (5%) Frame = +1 Query: 1 CKEKAVYAVFNCLKKVCLKDWAREFYIEYRKQIDLPNKSETFSGLVGHVHLDKTQLKLFN 180 C+E A V N LKKV L+D A E IEY++ P E +GLVGH+HL+ LK Sbjct: 694 CQENASCLVKNHLKKVSLRDAAIELAIEYKRPKLEPESCEIDAGLVGHIHLNSGLLKASG 753 Query: 181 QNIDEILGKCQDVLFKYTKKKGQLSQFIKRVVLSVCECCNYKQPHDGDLCHFPCLQFTFV 360 + +IL KC++ + KKK + KR++LSV +CC + D PCL+F + Sbjct: 754 IGMHDILQKCEEQVNLLRKKK-KYGYHFKRILLSVSDCCFFNHS-DSKWTDMPCLKFFWQ 811 Query: 361 DANTAQNDESLECAIHVMAKVICPILLDTIVKGDPRVFEAKIVWIEPDATSWAANSCKTL 540 D D LE H+MA +ICP+LLDTI+KGDPR+ I+WI P T+W + C + Sbjct: 812 D----MTDTDLERTKHIMADMICPVLLDTIIKGDPRISTVNIIWINPGTTTWVQSPCSST 867 Query: 541 KGELGLEIVLEKAAVRENGDAWRMLMDACLPVMHLIDTSRSCPYGIQQNRELLGISCAFD 720 KGEL +E+ LEK AVR GDAWR+++D CLPV HLIDT RS PY I+Q ++L GISCAFD Sbjct: 868 KGELAVEVALEKEAVRLTGDAWRIVLDCCLPVFHLIDTRRSIPYAIKQIQDLFGISCAFD 927 Query: 721 QAVKRLSRSIRMVSKGVMKEHLLLVANSITCTGNLVGFNTGGYKALFRSFKVQVPFTAAT 900 QAV+RLS S+ MV+KGV+KEHLLL+A+S+TC GNLVGFNT G KAL R+ VQVPFT AT Sbjct: 928 QAVQRLSTSVTMVTKGVLKEHLLLLASSMTCAGNLVGFNTSGIKALCRALNVQVPFTEAT 987 Query: 901 LFTPMKCFETAAEKCQTDSLTSVVSSCSWGKKVAIGTGAPFQILWDKNQTAMHKDIGKGV 1080 L+TP KCFE A+EKC D+L S+V SCSWGK+V+IGTGA F +LW+ + M D V Sbjct: 988 LYTPRKCFERASEKCHVDTLASIVGSCSWGKRVSIGTGAKFDLLWETKEIEM-ADKPTDV 1046 Query: 1081 YDFLEMLNPTLSGEA-TGACLADVDDIIEDQEMEVCLSPVANGHMTFEENHEVEYSFKKN 1257 Y+FL +++ E +G D++ +D ME LSP FEE E+ Sbjct: 1047 YNFLHLVSSANEEEVDSGGLGEDIESFEKDVYMEPALSPEQENKAVFEETLEIGVD---- 1102 Query: 1258 LNQENRKIENSCQDFASD------------FGDKSGNWQGWESRQDSGK---MAETNAWS 1392 + E+S F S G G W W S++D ++T WS Sbjct: 1103 -SDITGADESSWDAFPSSGTGWNANKIDTGSGSAEGGWSSWGSKKDQANPEDSSKTGGWS 1161 Query: 1393 SWDSQHMGQ----ITVGSWENKDSQNCSDPSVELNAWG---KGTEKNVASWETRSVKSSG 1551 S S+ Q G W+ S S+ WG K T + S + G Sbjct: 1162 SGGSKQKPQPEDSSKSGGWDASKSWGGSNQGDPSPVWGQPVKATNDISIENDHGSGSAEG 1221 Query: 1552 GDIWNEKVTKNLEEKEGTSV---W-KNISWRPKGNSNEDAFSLPGTLDSESSKEPWVVGA 1719 G N + K+L ++E +S W + SW G+ +D S W G Sbjct: 1222 GGWANSGMKKDLSKQENSSTAGGWDASKSW--SGSKPKDPSS------------AWGAGK 1267 Query: 1720 RDNTGNSWKNGPDAAKLPKATT-------WGSSETEFDKDLNSVQNG-----KSYNERGK 1863 + + N WK L + WG + + ++ +NG E Sbjct: 1268 KTDDNNGWKKSDSKKDLASGSVEDGGCSGWGPKKDLLQPEDSAGENGWGASKSKSKEPSS 1327 Query: 1864 SWNSNA-TVDFNNQQSGNSTRNLEN 1935 +W A D + N R+ EN Sbjct: 1328 AWGKPAQETDNIGWKKNNPQRDSEN 1352 >ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa] gi|550343552|gb|EEE78905.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa] Length = 1920 Score = 417 bits (1071), Expect = e-113 Identities = 263/654 (40%), Positives = 370/654 (56%), Gaps = 49/654 (7%) Frame = +1 Query: 1 CKEKAVYAVFNCLKKVCLKDWAREFYIEYRKQIDLPNKSETFSGLVGHVHLDKTQLKLFN 180 C+E+A Y V N L+KV LKD A+ F IEY+ Q +P + +GLVGHVHLDK +L+ N Sbjct: 901 CQERAAYLVKNHLEKVSLKDIAKCFMIEYKSQ-QIPESFGSDAGLVGHVHLDKRKLQDLN 959 Query: 181 QNIDEILGKCQDVLFKYTKKKGQLSQFIKRVVLSVCECCNYKQPHDGDLCHFPCLQFTFV 360 IL KCQ+ + + KKK ++ K+ +L V E C+++Q D PCL F + Sbjct: 960 ITAQVILEKCQETVNTFRKKK-KVGNLFKKTILLVSESCSFQQCIDES----PCLMFFWQ 1014 Query: 361 DANTAQNDESLECAIHVMAKVICPILLDTIVKGDPRVFEAKIVWIEPDATSWAANSCKTL 540 A+ D LE +++A +ICP+LL+TI+KGD R+ A I+W P+ +W N +T Sbjct: 1015 GAD----DVHLERTSNILADMICPVLLETIIKGDHRISCANIIWATPETNTWIRNPSRTQ 1070 Query: 541 KGELGLEIVLEKAAVRENGDAWRMLMDACLPVMHLIDTSRSCPYGIQQNRELLGISCAFD 720 KGEL L+IVLEK+ V+++GDAWR+++D+CLPV+HLI+T+RS PY I+Q +ELLG+SCAFD Sbjct: 1071 KGELALDIVLEKSVVKKSGDAWRIVLDSCLPVLHLINTTRSIPYAIKQVQELLGVSCAFD 1130 Query: 721 QAVKRLSRSIRMVSKGVMKEHLLLVANSITCTGNLVGFNTGGYKALFRSFKVQVPFTAAT 900 AV+RLS+S+ MV+KGV+KEHL+L+ NS+TC G+L+GF TGGYK L RS +QVPFT AT Sbjct: 1131 TAVQRLSKSVTMVAKGVLKEHLILLGNSMTCAGSLIGFYTGGYKTLSRSLDIQVPFTEAT 1190 Query: 901 LFTPMKCFETAAEKCQTDSLTSVVSSCSWGKKVAIGTGAPFQILWDKNQTAMHKDIGKGV 1080 LFTP KCFE AAEKC TDSL+S+V+SC+WGK V +GTG+ F +LWD + ++ + V Sbjct: 1191 LFTPRKCFEKAAEKCHTDSLSSIVASCAWGKHVTVGTGSHFDVLWDTKEACLNPEGSMDV 1250 Query: 1081 YDFLEMLNPTLSG-EATGACL-ADVDDI-IEDQEMEVCLSPVANGHM---TFEENHEVEY 1242 Y FL M+ T G E+ ACL A+VDD+ +ED++ LSP N TFE++ E Sbjct: 1251 YSFLNMVRSTAGGEESVTACLGAEVDDLMLEDEDWN--LSPEHNSSSDKPTFEDSAE--- 1305 Query: 1243 SFKKNLNQENRKIENSCQDFAS--DFGDKSGNW-----------QGWESRQDSGKMAETN 1383 F+ L N+ E++ + +S D SGNW + W ++ + A Sbjct: 1306 -FQDFLG--NQPAESNWEKISSLKDRSRSSGNWDVDKNDGAVKEKPWSLGMNTAE-ANDV 1361 Query: 1384 AWSSWDSQHMGQITVGSWENKDSQNCSDPSVELNAWG-------KGTEKNVASWETRSVK 1542 A S WD+ + T SW +S+N S + W G V T S Sbjct: 1362 ASSGWDTA-AARTTNNSW---NSENNVAQSNSFSGWATKKPEPHNGFATKVQEEPTTSND 1417 Query: 1543 SSGGDIWNEKVTKN--LEEKEGTSVWKNISWRPKGNSNEDAFSLP-----GT--LDSESS 1695 G W K N E S W ++ + N+ P GT D + S Sbjct: 1418 WDAGAAWGRKDRDNKFAETNASKSWWGKVTDGDESGQNKSKNKRPEDQDVGTHGWDDKMS 1477 Query: 1696 KEPWVVG--------------ARDNTGNSWKNGPDAAKLPKATTWGSSETEFDK 1815 ++ + G D+ GNS G A A+TWG+ T+ DK Sbjct: 1478 QDQSISGWASKTTQEATTESLGWDSKGNS-NPGDAACGWKAASTWGAENTDGDK 1530