BLASTX nr result

ID: Zingiber23_contig00037236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00037236
         (656 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004955370.1| PREDICTED: uncharacterized protein LOC101755...    59   1e-06
ref|NP_001150001.1| myb-like DNA-binding domain, SHAQKYF class f...    59   1e-06
tpg|DAA59438.1| TPA: putative MYB DNA-binding domain superfamily...    58   3e-06
ref|XP_002459272.1| hypothetical protein SORBIDRAFT_02g001600 [S...    58   3e-06
ref|NP_001148713.1| myb-like DNA-binding domain, SHAQKYF class f...    57   4e-06

>ref|XP_004955370.1| PREDICTED: uncharacterized protein LOC101755467 [Setaria italica]
          Length = 358

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 40/87 (45%), Positives = 50/87 (57%)
 Frame = -3

Query: 654 VKSHLQKYRLHTRKAPKVSSIGGRPIAVLGGGMWVPQEDCTXXXXXXXXXXXXXXXXXXL 475
           VKSHLQKYRLH R+AP  S++  +PI VL GG+W+PQE  +                  L
Sbjct: 280 VKSHLQKYRLHNRRAPG-SAVVSQPI-VLVGGLWIPQEQSS--SQSGSPQGPLHFSTSGL 335

Query: 474 AVSNRAHSFAGESCGEEDEKSDSYTWR 394
           AVS    S A  SC EED +S+SY W+
Sbjct: 336 AVS----SAATVSCEEEDGRSESYGWK 358


>ref|NP_001150001.1| myb-like DNA-binding domain, SHAQKYF class family protein [Zea
           mays] gi|195635985|gb|ACG37461.1| myb-like DNA-binding
           domain, SHAQKYF class family protein [Zea mays]
           gi|414592132|tpg|DAA42703.1| TPA: putative MYB
           DNA-binding domain superfamily protein [Zea mays]
          Length = 345

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 39/87 (44%), Positives = 49/87 (56%)
 Frame = -3

Query: 654 VKSHLQKYRLHTRKAPKVSSIGGRPIAVLGGGMWVPQEDCTXXXXXXXXXXXXXXXXXXL 475
           VKSHLQKYRLH R+AP  S +  +PI VL GG+W+PQE  +                  +
Sbjct: 267 VKSHLQKYRLHNRRAPG-SGVVSQPI-VLVGGLWIPQEQSS--SQSGSPHGPLHFSTSGI 322

Query: 474 AVSNRAHSFAGESCGEEDEKSDSYTWR 394
           AVS    S A  SC EED +S+SY W+
Sbjct: 323 AVS----SAATVSCEEEDGRSESYGWK 345


>tpg|DAA59438.1| TPA: putative MYB DNA-binding domain superfamily protein [Zea mays]
          Length = 369

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 39/87 (44%), Positives = 48/87 (55%)
 Frame = -3

Query: 654 VKSHLQKYRLHTRKAPKVSSIGGRPIAVLGGGMWVPQEDCTXXXXXXXXXXXXXXXXXXL 475
           VKSHLQKYRLH R+AP  S +  +PI VL GG+W+PQE  +                   
Sbjct: 290 VKSHLQKYRLHNRRAPG-SGVVRQPI-VLVGGLWIPQEQGS-PQSGSPHGPLHHLSTSVA 346

Query: 474 AVSNRAHSFAGESCGEEDEKSDSYTWR 394
           AVS    S A  SC EED +S+SY W+
Sbjct: 347 AVS----SAATASCEEEDGRSESYGWK 369


>ref|XP_002459272.1| hypothetical protein SORBIDRAFT_02g001600 [Sorghum bicolor]
           gi|241922649|gb|EER95793.1| hypothetical protein
           SORBIDRAFT_02g001600 [Sorghum bicolor]
          Length = 359

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 36/87 (41%), Positives = 46/87 (52%)
 Frame = -3

Query: 654 VKSHLQKYRLHTRKAPKVSSIGGRPIAVLGGGMWVPQEDCTXXXXXXXXXXXXXXXXXXL 475
           VKSHLQKYRLH R+AP  S +  +PI +L GG+W+PQE  +                   
Sbjct: 280 VKSHLQKYRLHNRRAPG-SGVVSQPI-MLVGGLWIPQEQSS-----SQSGSPHGPLHFST 332

Query: 474 AVSNRAHSFAGESCGEEDEKSDSYTWR 394
           A      S A  SC EED +S+SY W+
Sbjct: 333 ASGIAVSSAATVSCEEEDGRSESYGWK 359


>ref|NP_001148713.1| myb-like DNA-binding domain, SHAQKYF class family protein [Zea
           mays] gi|195621582|gb|ACG32621.1| myb-like DNA-binding
           domain, SHAQKYF class family protein [Zea mays]
          Length = 370

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 39/87 (44%), Positives = 48/87 (55%)
 Frame = -3

Query: 654 VKSHLQKYRLHTRKAPKVSSIGGRPIAVLGGGMWVPQEDCTXXXXXXXXXXXXXXXXXXL 475
           VKSHLQKYRLH R+AP  S +  +PI VL GG+W+PQE  +                   
Sbjct: 291 VKSHLQKYRLHNRRAPG-SGVVRQPI-VLVGGLWIPQEQGS-PQSGSPHGPLHHLSTSVA 347

Query: 474 AVSNRAHSFAGESCGEEDEKSDSYTWR 394
           AVS    S A  SC EED +S+SY W+
Sbjct: 348 AVS----SAATASCEEEDGRSESYGWQ 370


Top