BLASTX nr result

ID: Zingiber23_contig00037215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00037215
         (209 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_005415583.1| hypothetical protein RSPPHO_03274, partial [...    79   5e-13
emb|CCG06598.1| Putative uncharacterized protein, partial [Rhodo...    78   1e-12
ref|WP_004595993.1| hypothetical protein [Rickettsia prowazekii]...    51   8e-11
ref|WP_009466332.1| hypothetical protein [Roseibium sp. TrichSKD...    60   2e-07

>ref|YP_005415583.1| hypothetical protein RSPPHO_03274, partial [Rhodospirillum
           photometricum DSM 122] gi|504226152|ref|WP_014413254.1|
           hypothetical protein, partial [Rhodospirillum
           photometricum] gi|378401497|emb|CCG06613.1| Putative
           uncharacterized protein, partial [Rhodospirillum
           photometricum DSM 122]
          Length = 150

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 40/67 (59%), Positives = 46/67 (68%)
 Frame = -1

Query: 203 FLQHSSLKRLGILYQSTCVGFGYGLMWRLFPGTPSKPNQSIKVGQHTGFVTIHWLQNIHC 24
           FLQH SLKRLGILYQ TCVG GYG    LFPG P +P+QS K+ Q    VT+H L+ I+ 
Sbjct: 1   FLQHHSLKRLGILYQPTCVGLGYGSYVGLFPGLPWRPDQSDKIRQRPEGVTLHELRTINL 60

Query: 23  IPIDYAF 3
           I I Y F
Sbjct: 61  IAIAYGF 67


>emb|CCG06598.1| Putative uncharacterized protein, partial [Rhodospirillum
           photometricum DSM 122]
          Length = 150

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 40/67 (59%), Positives = 45/67 (67%)
 Frame = -1

Query: 203 FLQHSSLKRLGILYQSTCVGFGYGLMWRLFPGTPSKPNQSIKVGQHTGFVTIHWLQNIHC 24
           FLQH SLKRLGILYQ TCVG GYG    LFPG P +P+QS K  Q    VT+H L+ I+ 
Sbjct: 1   FLQHHSLKRLGILYQPTCVGLGYGSYVGLFPGLPWRPDQSDKTRQRPEGVTLHELRTINL 60

Query: 23  IPIDYAF 3
           I I Y F
Sbjct: 61  IAIAYGF 67


>ref|WP_004595993.1| hypothetical protein [Rickettsia prowazekii]
           gi|484358049|gb|EOB10733.1| hypothetical protein
           H376_690 [Rickettsia prowazekii str. GvF12]
           gi|484358399|gb|EOB11076.1| hypothetical protein
           H377_530 [Rickettsia prowazekii str. Cairo 3]
          Length = 156

 Score = 50.8 bits (120), Expect(2) = 8e-11
 Identities = 22/30 (73%), Positives = 25/30 (83%)
 Frame = -3

Query: 204 VPST*FSQAPWYTLPVHLCRFRVRSNVEAI 115
           VPS  FSQAPWYTLPVHLCRF VRS ++ +
Sbjct: 24  VPSASFSQAPWYTLPVHLCRFWVRSIIKVL 53



 Score = 41.2 bits (95), Expect(2) = 8e-11
 Identities = 23/39 (58%), Positives = 25/39 (64%)
 Frame = -1

Query: 119 LFPGTPSKPNQSIKVGQHTGFVTIHWLQNIHCIPIDYAF 3
           LFPG  S  NQS K  Q T FVT    +NI+ IPIDYAF
Sbjct: 53  LFPGKYSLHNQSNKTIQFTIFVTSFRFRNINLIPIDYAF 91


>ref|WP_009466332.1| hypothetical protein [Roseibium sp. TrichSKD4]
           gi|307769360|gb|EFO28588.1| conserved hypothetical
           protein [Roseibium sp. TrichSKD4]
           gi|307772078|gb|EFO31301.1| conserved hypothetical
           protein [Roseibium sp. TrichSKD4]
           gi|307772895|gb|EFO32114.1| conserved hypothetical
           protein [Roseibium sp. TrichSKD4]
           gi|307772930|gb|EFO32147.1| conserved hypothetical
           protein [Roseibium sp. TrichSKD4]
           gi|307774094|gb|EFO33310.1| conserved hypothetical
           protein [Roseibium sp. TrichSKD4]
           gi|307774317|gb|EFO33529.1| conserved hypothetical
           protein [Roseibium sp. TrichSKD4]
          Length = 60

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 30/41 (73%), Positives = 30/41 (73%), Gaps = 5/41 (12%)
 Frame = -1

Query: 209 AEFLQHSSLKRLGILYQSTCVGFGYGL-----MWRLFPGTP 102
           AEFLQHSSLKRLGILYQSTCVGFGYGL      W  F   P
Sbjct: 18  AEFLQHSSLKRLGILYQSTCVGFGYGLYGGAISWNTFAAPP 58


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