BLASTX nr result
ID: Zingiber23_contig00037054
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00037054
(750 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001044782.1| Os01g0844800 [Oryza sativa Japonica Group] g... 119 1e-24
dbj|BAB89558.1| putative pumilio domain-containing protein PPD1 ... 119 1e-24
gb|EAY76473.1| hypothetical protein OsI_04410 [Oryza sativa Indi... 116 9e-24
gb|EMT17283.1| Pumilio-like protein [Aegilops tauschii] 107 6e-21
ref|XP_006644998.1| PREDICTED: pumilio homolog 2-like [Oryza bra... 106 9e-21
gb|EMS59607.1| Pumilio-like protein 2 [Triticum urartu] 103 6e-20
ref|XP_002456623.1| hypothetical protein SORBIDRAFT_03g039600 [S... 101 3e-19
ref|XP_002278108.2| PREDICTED: pumilio homolog 1-like [Vitis vin... 96 1e-17
gb|EOY18067.1| Pumilio 2 isoform 4, partial [Theobroma cacao] 96 2e-17
gb|EOY18066.1| Pumilio 2 isoform 3, partial [Theobroma cacao] 96 2e-17
gb|EOY18064.1| Pumilio 2 isoform 1 [Theobroma cacao] 96 2e-17
ref|XP_004970555.1| PREDICTED: pumilio homolog 2-like [Setaria i... 95 2e-17
gb|EMJ20108.1| hypothetical protein PRUPE_ppa000626mg [Prunus pe... 95 3e-17
ref|XP_006486391.1| PREDICTED: pumilio homolog 1-like [Citrus si... 94 5e-17
ref|XP_006435648.1| hypothetical protein CICLE_v10030588mg [Citr... 94 5e-17
ref|XP_006435647.1| hypothetical protein CICLE_v10030588mg [Citr... 94 5e-17
ref|XP_006435646.1| hypothetical protein CICLE_v10030588mg [Citr... 94 5e-17
ref|XP_002299859.2| pumilio/Puf RNA-binding domain-containing fa... 93 1e-16
ref|XP_004294652.1| PREDICTED: pumilio homolog 2-like [Fragaria ... 92 2e-16
ref|XP_002283191.1| PREDICTED: pumilio homolog 1-like [Vitis vin... 91 3e-16
>ref|NP_001044782.1| Os01g0844800 [Oryza sativa Japonica Group]
gi|113534313|dbj|BAF06696.1| Os01g0844800 [Oryza sativa
Japonica Group] gi|215704672|dbj|BAG94300.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 1060
Score = 119 bits (298), Expect = 1e-24
Identities = 79/250 (31%), Positives = 127/250 (50%), Gaps = 5/250 (2%)
Frame = +3
Query: 3 RSTQRLLVGDSLMRGMNDGITNGGEEEDGGSLLAKQAIFS---ALEEQLAKQRKIPGSGE 173
RSTQRL G ++ G+ DG EE G + +FS +++ A + + G+ E
Sbjct: 139 RSTQRLKAG--VVGGIGDG-RKVSPEETGHEPTVGRPVFSQNVGFDQEEAARNDVGGAAE 195
Query: 174 WVERG-DGFNGLLLRRQMSFADVVQHEVVYEXXXXXXXXXXXXXNAFANGLEQLASSSTH 350
WV+ G DG GL L RQ SFAD++Q + N+F + E L S+ +
Sbjct: 196 WVDGGGDGLIGLSLGRQRSFADILQDNIGRRTPASEHPSRAVSRNSFLDNQELLNSADSQ 255
Query: 351 FASHKVCTSVDGEGFSAKSDNGHEKVGTSFCHNYASVVSSSLQRSNTMDTKHAARATSLC 530
++ H + ++ +G + S +ASV+ SS+ R+ T D+ + R S
Sbjct: 256 YSMHNDILEAQRAVGNVQNVSGLPSINASASQTFASVLGSSISRNATPDSHYVPRVPSPG 315
Query: 531 FPQIGSRIDTPDRITQSSSSFNVLPSDTVETDDVSASLSNINLSTSGSIVDEN-ITKSKI 707
P +G RI++ ++ SSSFN S VE DD+ A++SN+N+S G++ D N I++SK
Sbjct: 316 LPPVGVRINSNEKKLNCSSSFNTASSKAVEPDDILAAISNMNMSKDGTLGDSNSISQSKF 375
Query: 708 LQKFDDSQNL 737
+ D QN+
Sbjct: 376 QSEISDHQNI 385
>dbj|BAB89558.1| putative pumilio domain-containing protein PPD1 [Oryza sativa
Japonica Group] gi|125572616|gb|EAZ14131.1| hypothetical
protein OsJ_04054 [Oryza sativa Japonica Group]
Length = 1048
Score = 119 bits (298), Expect = 1e-24
Identities = 79/250 (31%), Positives = 127/250 (50%), Gaps = 5/250 (2%)
Frame = +3
Query: 3 RSTQRLLVGDSLMRGMNDGITNGGEEEDGGSLLAKQAIFS---ALEEQLAKQRKIPGSGE 173
RSTQRL G ++ G+ DG EE G + +FS +++ A + + G+ E
Sbjct: 127 RSTQRLKAG--VVGGIGDG-RKVSPEETGHEPTVGRPVFSQNVGFDQEEAARNDVGGAAE 183
Query: 174 WVERG-DGFNGLLLRRQMSFADVVQHEVVYEXXXXXXXXXXXXXNAFANGLEQLASSSTH 350
WV+ G DG GL L RQ SFAD++Q + N+F + E L S+ +
Sbjct: 184 WVDGGGDGLIGLSLGRQRSFADILQDNIGRRTPASEHPSRAVSRNSFLDNQELLNSADSQ 243
Query: 351 FASHKVCTSVDGEGFSAKSDNGHEKVGTSFCHNYASVVSSSLQRSNTMDTKHAARATSLC 530
++ H + ++ +G + S +ASV+ SS+ R+ T D+ + R S
Sbjct: 244 YSMHNDILEAQRAVGNVQNVSGLPSINASASQTFASVLGSSISRNATPDSHYVPRVPSPG 303
Query: 531 FPQIGSRIDTPDRITQSSSSFNVLPSDTVETDDVSASLSNINLSTSGSIVDEN-ITKSKI 707
P +G RI++ ++ SSSFN S VE DD+ A++SN+N+S G++ D N I++SK
Sbjct: 304 LPPVGVRINSNEKKLNCSSSFNTASSKAVEPDDILAAISNMNMSKDGTLGDSNSISQSKF 363
Query: 708 LQKFDDSQNL 737
+ D QN+
Sbjct: 364 QSEISDHQNI 373
>gb|EAY76473.1| hypothetical protein OsI_04410 [Oryza sativa Indica Group]
Length = 1046
Score = 116 bits (290), Expect = 9e-24
Identities = 78/250 (31%), Positives = 126/250 (50%), Gaps = 5/250 (2%)
Frame = +3
Query: 3 RSTQRLLVGDSLMRGMNDGITNGGEEEDGGSLLAKQAIFS---ALEEQLAKQRKIPGSGE 173
RSTQRL G ++ G+ D EE G + +FS +++ A + + G+ E
Sbjct: 125 RSTQRLKAG--VVGGIGDR-RKVSPEETGHEPTVGRPVFSQNVGFDQEEAARNDVGGAAE 181
Query: 174 WVERG-DGFNGLLLRRQMSFADVVQHEVVYEXXXXXXXXXXXXXNAFANGLEQLASSSTH 350
WV+ G DG GL L RQ SFAD++Q + N+F + E L S+ +
Sbjct: 182 WVDGGGDGLIGLSLGRQRSFADILQDNIGRRTPASEHPSRAVSRNSFLDNQELLNSADSQ 241
Query: 351 FASHKVCTSVDGEGFSAKSDNGHEKVGTSFCHNYASVVSSSLQRSNTMDTKHAARATSLC 530
++ H + ++ +G + S +ASV+ SS+ R+ T D+ + R S
Sbjct: 242 YSMHNDILEAQRAVGNVQNVSGLPSINASTSQTFASVLGSSISRNATPDSHYVPRVPSPG 301
Query: 531 FPQIGSRIDTPDRITQSSSSFNVLPSDTVETDDVSASLSNINLSTSGSIVDEN-ITKSKI 707
P +G RI++ ++ SSSFN S VE DD+ A++SN+N+S G++ D N I++SK
Sbjct: 302 LPPVGVRINSNEKKLNCSSSFNTASSKAVEPDDILAAISNMNMSKDGTLGDSNSISQSKF 361
Query: 708 LQKFDDSQNL 737
+ D QN+
Sbjct: 362 QSEISDHQNI 371
>gb|EMT17283.1| Pumilio-like protein [Aegilops tauschii]
Length = 946
Score = 107 bits (266), Expect = 6e-21
Identities = 75/246 (30%), Positives = 120/246 (48%), Gaps = 6/246 (2%)
Frame = +3
Query: 15 RLLVGDSLMRGMNDGITNGGEEEDGGSLLAKQAIFS---ALEEQLAKQRKIPGSGEWVER 185
RL G ++ G+ D +EE G + A ++F + + + + G+ EWV+R
Sbjct: 66 RLKAGVGVVGGIGDR-RKAVQEEAGQGMAAGMSLFPQNPGFDREEDGSKGVGGAAEWVDR 124
Query: 186 G-DGFNGLLLRRQMSFADVVQHEVVYEXXXXXXXXXXXXXNAFANGLEQLASSSTHFASH 362
G DG GL L RQ SFAD+ Q + N+F + E + S ++ H
Sbjct: 125 GGDGLIGLSLGRQRSFADMFQDNLGRRTPTSEHSSRAASRNSFLDNQESVDPSENQYSLH 184
Query: 363 KVCTSVDGEGFSAKSDNGHEKVGTSFCHNYASVVSSSLQRSNTMDTKHAARATSLCFPQI 542
+A+S G + S +ASV+ SS R+ T D+ + R S P +
Sbjct: 185 NDTMDAQRSVGNAQSVGGLSSINASASQTFASVLGSSASRNATPDSHYIPRVPSPGLPPV 244
Query: 543 GSRIDTPD-RITQSSSSFNVLPSDTVETDDVSASLSNINLSTSGSIVD-ENITKSKILQK 716
G+RI + + R+ SSSSFN + S +E DD+ +LS++NLS G++ D NI++SK ++
Sbjct: 245 GARISSNEKRLNCSSSSFNTVSSKALEPDDILTALSSMNLSKGGTLNDNSNISQSKFQRE 304
Query: 717 FDDSQN 734
D N
Sbjct: 305 ISDYHN 310
>ref|XP_006644998.1| PREDICTED: pumilio homolog 2-like [Oryza brachyantha]
Length = 1058
Score = 106 bits (264), Expect = 9e-21
Identities = 77/249 (30%), Positives = 124/249 (49%), Gaps = 4/249 (1%)
Frame = +3
Query: 3 RSTQRLLVGDSLMRGMNDGITNGGEEEDGGSLLAKQAIFSALE--EQLAKQRKIPGSGEW 176
RSTQRL G ++ G+ D +EE G A + +FS +Q ++ + G+ EW
Sbjct: 139 RSTQRLKAG--VVGGIGDR-RKVLQEETGHEPTAGRPVFSQNRGFDQEDTRKDVGGAAEW 195
Query: 177 VERG-DGFNGLLLRRQMSFADVVQHEVVYEXXXXXXXXXXXXXNAFANGLEQLASSSTHF 353
V+ G DG GL L RQ SFAD++Q + N+F + E L S+ +
Sbjct: 196 VDGGGDGLIGLSLGRQRSFADILQDNLGRRTPTSDHPSRAASRNSFLDNQELLNSAENQY 255
Query: 354 ASHKVCTSVDGEGFSAKSDNGHEKVGTSFCHNYASVVSSSLQRSNTMDTKHAARATSLCF 533
+ H + ++ +G + S +ASV+ SS+ R N D+ + R S
Sbjct: 256 SMHNDILEAQRPVGNVQNVSGLPSMNASTSQTFASVLGSSVSR-NAPDSHYVPRVPSPGL 314
Query: 534 PQIGSRIDTPDRITQSSSSFNVLPSDTVETDDVSASLSNINLSTSGSIVDEN-ITKSKIL 710
P +G RI++ ++ SSSFN S + DD+ A+LSN+N+S G++ D N I++ K
Sbjct: 315 PPVGVRINSNEKKLNCSSSFNTASSKAADPDDILAALSNLNMSKDGTLSDSNSISQPKFQ 374
Query: 711 QKFDDSQNL 737
++ D QN+
Sbjct: 375 REISDHQNI 383
>gb|EMS59607.1| Pumilio-like protein 2 [Triticum urartu]
Length = 1001
Score = 103 bits (257), Expect = 6e-20
Identities = 70/226 (30%), Positives = 112/226 (49%), Gaps = 6/226 (2%)
Frame = +3
Query: 75 EEEDGGSLLAKQAIFS---ALEEQLAKQRKIPGSGEWVERG-DGFNGLLLRRQMSFADVV 242
+EE G + A ++F + + + + G+ EWV+RG DG GL L RQ SFA +
Sbjct: 90 QEEAGQGMAAGMSLFPQTPGFDREEDGNKGVGGAAEWVDRGGDGLIGLSLGRQRSFAYMF 149
Query: 243 QHEVVYEXXXXXXXXXXXXXNAFANGLEQLASSSTHFASHKVCTSVDGEGFSAKSDNGHE 422
Q + N+F + E + S ++ H +A+S G
Sbjct: 150 QDNLGRRTPTSEHSSRAASRNSFLDNQESVDPSENQYSLHNDTMDAQRSVGNAQSVGGLS 209
Query: 423 KVGTSFCHNYASVVSSSLQRSNTMDTKHAARATSLCFPQIGSRIDTPD-RITQSSSSFNV 599
+ S +ASV+ SS RS T D+ + R S P +G+RI++ + R+ SSSSFN
Sbjct: 210 SINASASQTFASVLGSSASRSATPDSHYIPRVPSPGLPPVGARINSNEKRLNCSSSSFNT 269
Query: 600 LPSDTVETDDVSASLSNINLSTSGSIVD-ENITKSKILQKFDDSQN 734
+ S +E DD+ +LS++NLS G++ D NI++SK ++ D N
Sbjct: 270 ISSKALEPDDILTALSSMNLSKGGTLNDNSNISQSKFQREISDYHN 315
>ref|XP_002456623.1| hypothetical protein SORBIDRAFT_03g039600 [Sorghum bicolor]
gi|241928598|gb|EES01743.1| hypothetical protein
SORBIDRAFT_03g039600 [Sorghum bicolor]
Length = 1057
Score = 101 bits (251), Expect = 3e-19
Identities = 78/250 (31%), Positives = 123/250 (49%), Gaps = 7/250 (2%)
Frame = +3
Query: 3 RSTQRLLVGDSLMRGMNDGITNGGEEEDGGSLLAK-QAIFS---ALEEQLAKQRKIPGSG 170
RSTQRL G ++ G+ D E+ G+ A +++FS E + + G+
Sbjct: 141 RSTQRLKSG--VVGGIGDKRKPIQEDAGQGTATAVGRSLFSLHPGFEREEEARNDGGGAA 198
Query: 171 EWVERG-DGFNGLLLRRQMSFADVVQHEVVYEXXXXXXXXXXXXXNAFANGLEQLASSST 347
EWV+ G DG GL L RQ SFAD++Q + N+F + E + +
Sbjct: 199 EWVDGGGDGLIGLSLGRQRSFADILQDNIGRRTPNSEHPSRTASRNSFLDNQEPVNPAEN 258
Query: 348 HFASHKVCTSVDGEGFSAKSDNGHEKVGTSFCHNYASVVSSSLQRSNTMDTKHAARATSL 527
++ H V + ++ +G + TS +AS++ SS+ R+ T D + AR S
Sbjct: 259 QYSIHNDILDVHHPIGNVQNVSGLHNLNTSTSQTFASIMGSSVSRNATPDPHYVARVPSP 318
Query: 528 CFPQIGSRIDTPDR-ITQSSSSFNVLPSDTVETDDVSASLSNINLSTSGSIVD-ENITKS 701
P +G RI + D+ + S S FN + S V TDD+ ++LSN+ LS SGS+ D NI++S
Sbjct: 319 GLPPVGVRITSNDKKLNCSPSPFNTVSSKAVGTDDILSALSNMKLSKSGSLNDNNNISRS 378
Query: 702 KILQKFDDSQ 731
+ D Q
Sbjct: 379 NFQRDISDQQ 388
>ref|XP_002278108.2| PREDICTED: pumilio homolog 1-like [Vitis vinifera]
Length = 1015
Score = 96.3 bits (238), Expect = 1e-17
Identities = 77/231 (33%), Positives = 116/231 (50%), Gaps = 9/231 (3%)
Frame = +3
Query: 72 GEEEDGGSLLAKQAIFSAL-EEQLAKQRKIPGSGEWVERGDGFNGL----LLRRQMSFAD 236
G + +G SL Q F+ +E A+ RK G EW GDG GL L RQ S A+
Sbjct: 153 GGDGNGSSLFLMQPGFNGQKDENGAESRKAQGV-EW--GGDGLIGLPGLGLGSRQKSLAE 209
Query: 237 VVQHEVVYEXXXXXXXXXXXXXNAFANGLEQLASSSTHFASHKVCTSVDG--EGFSAKSD 410
++Q ++ + NAF + +E + +H H S+D G ++
Sbjct: 210 IIQDDIGHATSVSRHPSRPASRNAFDDNVETSEAQFSHL--HHELASMDALRSGTKIQAI 267
Query: 411 NGHEKVGTSFCHNYASVVSSSLQRSNTMDTKHAARATSLCFPQI-GSRIDTPD-RITQSS 584
+ + V +S H YAS + +SL RS T D + ARA S P + G R + D R S
Sbjct: 268 SAVQNVASSASHTYASALGASLSRSTTPDPQLVARAPSPRIPTVGGGRTSSMDKRSGNGS 327
Query: 585 SSFNVLPSDTVETDDVSASLSNINLSTSGSIVDENITKSKILQKFDDSQNL 737
+SFN +P E+ D+ A+LS +NLST+G + EN ++S+I + DD +NL
Sbjct: 328 NSFNSVPPGIGESADLVAALSGLNLSTNGMVDGENHSRSQIQHEIDDHKNL 378
>gb|EOY18067.1| Pumilio 2 isoform 4, partial [Theobroma cacao]
Length = 698
Score = 95.5 bits (236), Expect = 2e-17
Identities = 87/251 (34%), Positives = 119/251 (47%), Gaps = 17/251 (6%)
Frame = +3
Query: 39 MRGMNDGITNGGEEEDGGSLLAKQAIFSALEEQLAKQRKIPGSGEWVERGDGFNGL---- 206
++G N N G +E+ SL A Q F EE GSG GDG GL
Sbjct: 110 LQGGNGNNGNNGSDENR-SLFAVQPGFGEEEENGGG-----GSGVKWGGGDGLIGLPGLG 163
Query: 207 -LLRRQMSFADVVQHEVVYEXXXXXXXXXXXXXNAFANGLEQLASSSTHFAS-HKVCTSV 380
L RQ S A++ Q ++ + NAF +G SS FA+ H TSV
Sbjct: 164 GLGTRQKSIAEIFQDDINHVTNASRHPSRPASRNAFDDGN---GSSEAQFANLHHELTSV 220
Query: 381 DGEGFSAKSDN--GHEKVGTSFCHNYASVVSSSLQRSNTMDTKHAARATSLCFPQIGSRI 554
D SA + VG+S H YAS + SL RS T D + AARA S P IG R
Sbjct: 221 DALRSSANKPGMPSVQNVGSSASHTYASALGLSLSRSTTPDPQLAARAPSPRIPPIGGRS 280
Query: 555 DTPDRITQ---------SSSSFNVLPSDTVETDDVSASLSNINLSTSGSIVDENITKSKI 707
+ D+ + SS+SFN + + E+ ++ A+LS +NLST+G I EN ++S+
Sbjct: 281 SSMDKRSVTGSNSFNGVSSNSFNGISASVGESAELVAALSGLNLSTNGVIDKENHSRSQA 340
Query: 708 LQKFDDSQNLL 740
DD+QNL+
Sbjct: 341 HHGIDDNQNLI 351
>gb|EOY18066.1| Pumilio 2 isoform 3, partial [Theobroma cacao]
Length = 710
Score = 95.5 bits (236), Expect = 2e-17
Identities = 87/251 (34%), Positives = 119/251 (47%), Gaps = 17/251 (6%)
Frame = +3
Query: 39 MRGMNDGITNGGEEEDGGSLLAKQAIFSALEEQLAKQRKIPGSGEWVERGDGFNGL---- 206
++G N N G +E+ SL A Q F EE GSG GDG GL
Sbjct: 110 LQGGNGNNGNNGSDENR-SLFAVQPGFGEEEENGGG-----GSGVKWGGGDGLIGLPGLG 163
Query: 207 -LLRRQMSFADVVQHEVVYEXXXXXXXXXXXXXNAFANGLEQLASSSTHFAS-HKVCTSV 380
L RQ S A++ Q ++ + NAF +G SS FA+ H TSV
Sbjct: 164 GLGTRQKSIAEIFQDDINHVTNASRHPSRPASRNAFDDGN---GSSEAQFANLHHELTSV 220
Query: 381 DGEGFSAKSDN--GHEKVGTSFCHNYASVVSSSLQRSNTMDTKHAARATSLCFPQIGSRI 554
D SA + VG+S H YAS + SL RS T D + AARA S P IG R
Sbjct: 221 DALRSSANKPGMPSVQNVGSSASHTYASALGLSLSRSTTPDPQLAARAPSPRIPPIGGRS 280
Query: 555 DTPDRITQ---------SSSSFNVLPSDTVETDDVSASLSNINLSTSGSIVDENITKSKI 707
+ D+ + SS+SFN + + E+ ++ A+LS +NLST+G I EN ++S+
Sbjct: 281 SSMDKRSVTGSNSFNGVSSNSFNGISASVGESAELVAALSGLNLSTNGVIDKENHSRSQA 340
Query: 708 LQKFDDSQNLL 740
DD+QNL+
Sbjct: 341 HHGIDDNQNLI 351
>gb|EOY18064.1| Pumilio 2 isoform 1 [Theobroma cacao]
Length = 1016
Score = 95.5 bits (236), Expect = 2e-17
Identities = 87/251 (34%), Positives = 119/251 (47%), Gaps = 17/251 (6%)
Frame = +3
Query: 39 MRGMNDGITNGGEEEDGGSLLAKQAIFSALEEQLAKQRKIPGSGEWVERGDGFNGL---- 206
++G N N G +E+ SL A Q F EE GSG GDG GL
Sbjct: 110 LQGGNGNNGNNGSDENR-SLFAVQPGFGEEEENGGG-----GSGVKWGGGDGLIGLPGLG 163
Query: 207 -LLRRQMSFADVVQHEVVYEXXXXXXXXXXXXXNAFANGLEQLASSSTHFAS-HKVCTSV 380
L RQ S A++ Q ++ + NAF +G SS FA+ H TSV
Sbjct: 164 GLGTRQKSIAEIFQDDINHVTNASRHPSRPASRNAFDDGN---GSSEAQFANLHHELTSV 220
Query: 381 DGEGFSAKSDN--GHEKVGTSFCHNYASVVSSSLQRSNTMDTKHAARATSLCFPQIGSRI 554
D SA + VG+S H YAS + SL RS T D + AARA S P IG R
Sbjct: 221 DALRSSANKPGMPSVQNVGSSASHTYASALGLSLSRSTTPDPQLAARAPSPRIPPIGGRS 280
Query: 555 DTPDRITQ---------SSSSFNVLPSDTVETDDVSASLSNINLSTSGSIVDENITKSKI 707
+ D+ + SS+SFN + + E+ ++ A+LS +NLST+G I EN ++S+
Sbjct: 281 SSMDKRSVTGSNSFNGVSSNSFNGISASVGESAELVAALSGLNLSTNGVIDKENHSRSQA 340
Query: 708 LQKFDDSQNLL 740
DD+QNL+
Sbjct: 341 HHGIDDNQNLI 351
>ref|XP_004970555.1| PREDICTED: pumilio homolog 2-like [Setaria italica]
Length = 1056
Score = 95.1 bits (235), Expect = 2e-17
Identities = 71/250 (28%), Positives = 121/250 (48%), Gaps = 7/250 (2%)
Frame = +3
Query: 3 RSTQRLLVGDSLMRGMNDGITNGGEE--EDGGSLLAKQAIFSALEEQLAKQRKIPGSG-- 170
RSTQRL G ++ G+ D G E+ + G+ + + + ++ ++ G G
Sbjct: 138 RSTQRLKAG--VVGGIGDRRKVGQEDAVQGTGTAVGRSLFPQHPGSEQEEEARVDGGGAA 195
Query: 171 EWVERG-DGFNGLLLRRQMSFADVVQHEVVYEXXXXXXXXXXXXXNAFANGLEQLASSST 347
EWV+ G DG GL L RQ SFAD++Q + N+F + E + S+
Sbjct: 196 EWVDGGGDGLIGLSLGRQRSFADILQDNIGRRTPTSEHPSRAASRNSFLDNQEPVDSAEN 255
Query: 348 HFASHKVCTSVDGEGFSAKSDNGHEKVGTSFCHNYASVVSSSLQRSNTMDTKHAARATSL 527
++ H + ++ G + S +AS++ SS+ R+ T D + AR S
Sbjct: 256 QYSVHTDILEAHHPVGNVQNVGGRHSLNASTSQTFASILGSSVSRNATPDPHYVARVPSP 315
Query: 528 CFPQIGSRIDTPDR-ITQSSSSFNVLPSDTVETDDVSASLSNINLSTSGSI-VDENITKS 701
P +G RI + ++ + SSS FN + S V DD+ ++LS++NLS G++ + NI++S
Sbjct: 316 GLPPVGVRITSNEKKLNCSSSPFNTVSSKAVGADDILSALSSMNLSKGGTLNGNNNISRS 375
Query: 702 KILQKFDDSQ 731
+ D Q
Sbjct: 376 NFQRGTSDQQ 385
>gb|EMJ20108.1| hypothetical protein PRUPE_ppa000626mg [Prunus persica]
Length = 1062
Score = 94.7 bits (234), Expect = 3e-17
Identities = 82/250 (32%), Positives = 122/250 (48%), Gaps = 13/250 (5%)
Frame = +3
Query: 27 GDSLMRGMNDGITNGGEEEDGG----SLLAKQAIFSALEEQLAKQRKIPGSGEWVERGDG 194
G S + G+ D G +GG SL + Q EE RK P EW GDG
Sbjct: 139 GGSAVGGIGDRRIGGRSGGEGGDVNRSLFSVQPGVGGKEENGVAGRKAPA--EW--GGDG 194
Query: 195 FNGL----LLRRQMSFADVVQHEVVYEXXXXXXXXXXXXXNAFANGLEQLASSSTHFAS- 359
GL L RQ S A+++Q ++ + NAF +G+E +S T FA
Sbjct: 195 LIGLPGLGLGSRQKSIAEIIQDDI-HNTNVSRHPSRPASRNAFDDGVE---TSETQFAHL 250
Query: 360 HKVCTSVDG--EGFSAKSDNGHEKVGTSFCHNYASVVSSSLQRSNTMDTKHAARATSLCF 533
H+ S+D G + + + + VG+S H YAS + +SL RS T D + ARA S
Sbjct: 251 HRDLASIDALRSGGNKQGMSAVQNVGSSGSHTYASALGASLSRSTTPDPQLIARAPSPRI 310
Query: 534 PQI-GSRIDTPD-RITQSSSSFNVLPSDTVETDDVSASLSNINLSTSGSIVDENITKSKI 707
P + G R + D +I +SFN + ++ D++A+LS +NLS +G I +EN +S+I
Sbjct: 311 PPVGGGRASSMDKKIANGQNSFNGASPNVNDSADLAAALSGMNLSANGRIDEENHARSQI 370
Query: 708 LQKFDDSQNL 737
+ D+ NL
Sbjct: 371 QHEIDNHHNL 380
>ref|XP_006486391.1| PREDICTED: pumilio homolog 1-like [Citrus sinensis]
Length = 1034
Score = 94.0 bits (232), Expect = 5e-17
Identities = 87/254 (34%), Positives = 119/254 (46%), Gaps = 9/254 (3%)
Frame = +3
Query: 3 RSTQRLLVGDSLMRGMNDGITNGGEEEDGGSLLAKQAIFSALEEQLAKQRKIPGSGEWVE 182
R TQRL G G GI G + GSL A Q F EE+ G GEW
Sbjct: 122 RFTQRLRGG-----GEVGGI--GDRRKGNGSLFAVQPGFGGKEEE--NSGGSGGGGEW-- 170
Query: 183 RGDGFNGL----LLRRQMSFADVVQHEVVYEXXXXXXXXXXXXXNAFANGLEQLASSSTH 350
GDG GL L RQ S A+++Q ++ + NAF + +E SS T
Sbjct: 171 GGDGLIGLPGLGLGSRQKSIAEIIQDDMSHGAPVSRHPSRPPSRNAFEDAIE---SSETQ 227
Query: 351 FAS-HKVCTSVDGEGFSAKSDN--GHEKVGTSFCHNYASVVSSSLQRSNTMDTKHAARAT 521
FA H +S+DG G SA + VGTS H+YAS + +SL RS T D + ARA
Sbjct: 228 FAHLHHDLSSIDGLGSSANKQGMPSAQSVGTSASHSYASALGASLSRSTTPDPQLMARAP 287
Query: 522 SLCFPQIG-SRIDTPDRITQSSS-SFNVLPSDTVETDDVSASLSNINLSTSGSIVDENIT 695
S P G R + D+ + S N + ++ ++ A+LS +NLST G EN +
Sbjct: 288 SPRIPTAGVGRASSMDKRSVSGPLPLNGVSPSLKDSAEIVAALSGLNLSTDGVADQENNS 347
Query: 696 KSKILQKFDDSQNL 737
+S+ + DD +L
Sbjct: 348 RSQNQHEIDDRHSL 361
>ref|XP_006435648.1| hypothetical protein CICLE_v10030588mg [Citrus clementina]
gi|557537844|gb|ESR48888.1| hypothetical protein
CICLE_v10030588mg [Citrus clementina]
Length = 904
Score = 94.0 bits (232), Expect = 5e-17
Identities = 87/254 (34%), Positives = 119/254 (46%), Gaps = 9/254 (3%)
Frame = +3
Query: 3 RSTQRLLVGDSLMRGMNDGITNGGEEEDGGSLLAKQAIFSALEEQLAKQRKIPGSGEWVE 182
R TQRL G G GI G + GSL A Q F EE+ G GEW
Sbjct: 122 RFTQRLRGG-----GEVGGI--GDRRKGNGSLFAVQPGFGGKEEE--NSGGSGGGGEW-- 170
Query: 183 RGDGFNGL----LLRRQMSFADVVQHEVVYEXXXXXXXXXXXXXNAFANGLEQLASSSTH 350
GDG GL L RQ S A+++Q ++ + NAF + +E SS T
Sbjct: 171 GGDGLIGLPGLGLGSRQKSIAEIIQDDMSHGAPVSRHPSRPPSRNAFEDAIE---SSETQ 227
Query: 351 FAS-HKVCTSVDGEGFSAKSDN--GHEKVGTSFCHNYASVVSSSLQRSNTMDTKHAARAT 521
FA H +S+DG G SA + VGTS H+YAS + +SL RS T D + ARA
Sbjct: 228 FAHLHHDLSSIDGLGSSANKQGMPSAQSVGTSASHSYASALGASLSRSTTPDPQLMARAP 287
Query: 522 SLCFPQIG-SRIDTPDRITQSSS-SFNVLPSDTVETDDVSASLSNINLSTSGSIVDENIT 695
S P G R + D+ + S N + ++ ++ A+LS +NLST G EN +
Sbjct: 288 SPRIPTAGVGRASSMDKRSVSGPLPLNGVSPSLKDSAEIVAALSGLNLSTDGVADQENNS 347
Query: 696 KSKILQKFDDSQNL 737
+S+ + DD +L
Sbjct: 348 RSQNQHEIDDRHSL 361
>ref|XP_006435647.1| hypothetical protein CICLE_v10030588mg [Citrus clementina]
gi|557537843|gb|ESR48887.1| hypothetical protein
CICLE_v10030588mg [Citrus clementina]
Length = 967
Score = 94.0 bits (232), Expect = 5e-17
Identities = 87/254 (34%), Positives = 119/254 (46%), Gaps = 9/254 (3%)
Frame = +3
Query: 3 RSTQRLLVGDSLMRGMNDGITNGGEEEDGGSLLAKQAIFSALEEQLAKQRKIPGSGEWVE 182
R TQRL G G GI G + GSL A Q F EE+ G GEW
Sbjct: 122 RFTQRLRGG-----GEVGGI--GDRRKGNGSLFAVQPGFGGKEEE--NSGGSGGGGEW-- 170
Query: 183 RGDGFNGL----LLRRQMSFADVVQHEVVYEXXXXXXXXXXXXXNAFANGLEQLASSSTH 350
GDG GL L RQ S A+++Q ++ + NAF + +E SS T
Sbjct: 171 GGDGLIGLPGLGLGSRQKSIAEIIQDDMSHGAPVSRHPSRPPSRNAFEDAIE---SSETQ 227
Query: 351 FAS-HKVCTSVDGEGFSAKSDN--GHEKVGTSFCHNYASVVSSSLQRSNTMDTKHAARAT 521
FA H +S+DG G SA + VGTS H+YAS + +SL RS T D + ARA
Sbjct: 228 FAHLHHDLSSIDGLGSSANKQGMPSAQSVGTSASHSYASALGASLSRSTTPDPQLMARAP 287
Query: 522 SLCFPQIG-SRIDTPDRITQSSS-SFNVLPSDTVETDDVSASLSNINLSTSGSIVDENIT 695
S P G R + D+ + S N + ++ ++ A+LS +NLST G EN +
Sbjct: 288 SPRIPTAGVGRASSMDKRSVSGPLPLNGVSPSLKDSAEIVAALSGLNLSTDGVADQENNS 347
Query: 696 KSKILQKFDDSQNL 737
+S+ + DD +L
Sbjct: 348 RSQNQHEIDDRHSL 361
>ref|XP_006435646.1| hypothetical protein CICLE_v10030588mg [Citrus clementina]
gi|557537842|gb|ESR48886.1| hypothetical protein
CICLE_v10030588mg [Citrus clementina]
Length = 1034
Score = 94.0 bits (232), Expect = 5e-17
Identities = 87/254 (34%), Positives = 119/254 (46%), Gaps = 9/254 (3%)
Frame = +3
Query: 3 RSTQRLLVGDSLMRGMNDGITNGGEEEDGGSLLAKQAIFSALEEQLAKQRKIPGSGEWVE 182
R TQRL G G GI G + GSL A Q F EE+ G GEW
Sbjct: 122 RFTQRLRGG-----GEVGGI--GDRRKGNGSLFAVQPGFGGKEEE--NSGGSGGGGEW-- 170
Query: 183 RGDGFNGL----LLRRQMSFADVVQHEVVYEXXXXXXXXXXXXXNAFANGLEQLASSSTH 350
GDG GL L RQ S A+++Q ++ + NAF + +E SS T
Sbjct: 171 GGDGLIGLPGLGLGSRQKSIAEIIQDDMSHGAPVSRHPSRPPSRNAFEDAIE---SSETQ 227
Query: 351 FAS-HKVCTSVDGEGFSAKSDN--GHEKVGTSFCHNYASVVSSSLQRSNTMDTKHAARAT 521
FA H +S+DG G SA + VGTS H+YAS + +SL RS T D + ARA
Sbjct: 228 FAHLHHDLSSIDGLGSSANKQGMPSAQSVGTSASHSYASALGASLSRSTTPDPQLMARAP 287
Query: 522 SLCFPQIG-SRIDTPDRITQSSS-SFNVLPSDTVETDDVSASLSNINLSTSGSIVDENIT 695
S P G R + D+ + S N + ++ ++ A+LS +NLST G EN +
Sbjct: 288 SPRIPTAGVGRASSMDKRSVSGPLPLNGVSPSLKDSAEIVAALSGLNLSTDGVADQENNS 347
Query: 696 KSKILQKFDDSQNL 737
+S+ + DD +L
Sbjct: 348 RSQNQHEIDDRHSL 361
>ref|XP_002299859.2| pumilio/Puf RNA-binding domain-containing family protein [Populus
trichocarpa] gi|550348126|gb|EEE84664.2| pumilio/Puf
RNA-binding domain-containing family protein [Populus
trichocarpa]
Length = 1065
Score = 92.8 bits (229), Expect = 1e-16
Identities = 80/258 (31%), Positives = 125/258 (48%), Gaps = 11/258 (4%)
Frame = +3
Query: 3 RSTQRLLVGDSLMRGMNDGITNG-GEEEDGGSLLAKQAIF-SALEEQLAKQRKIPGSGEW 176
RS QRL G S++ G+ D + +G S+ + F S ++ + K+ GS EW
Sbjct: 127 RSAQRLKGGSSVLGGIGDRRKGSRADNGNGRSMFSMPPGFESRNQDSEVESEKVSGSLEW 186
Query: 177 VERGDGFNGL----LLRRQMSFADVVQHEVVYEXXXXXXXXXXXXXNAFANGLEQLASSS 344
GDG GL L +Q SFA++ Q ++ NAF +E L S+
Sbjct: 187 --GGDGLIGLPGLGLASKQKSFAEIFQDDLGRATPVTGPPSRPASRNAFNENVETLGSAE 244
Query: 345 THFAS-HKVCTSVDG--EGFSAKSDNGHEKVGTSFCHNYASVVSSSLQRSNTMDTKHAAR 515
A + +S D G + + + + +G ++YA+ + +SL RS T D +H AR
Sbjct: 245 AELAHLRRELSSADTLRSGANGQGSSPVQNIGQP-SYSYAAALGASLSRSTTPDPQHVAR 303
Query: 516 ATSLCFPQIG-SRIDTPD-RITQSSSSFNVLPSDTVETDDVSASLSNINLSTSGSIVDEN 689
A S C IG R+ T + R T SS+SF + S E ++ A+ S +NL+T+G + +E+
Sbjct: 304 APSPCPTPIGQGRVSTSEKRGTASSNSFIGVSSGIREPSELVAAFSGMNLATNGGVDEES 363
Query: 690 ITKSKILQKFDDSQNLLF 743
S+ Q D QN LF
Sbjct: 364 HLPSQAEQDVDSHQNYLF 381
>ref|XP_004294652.1| PREDICTED: pumilio homolog 2-like [Fragaria vesca subsp. vesca]
Length = 1077
Score = 91.7 bits (226), Expect = 2e-16
Identities = 82/263 (31%), Positives = 125/263 (47%), Gaps = 16/263 (6%)
Frame = +3
Query: 3 RSTQRLLVGDSLMRGMNDGI-TNGGEEEDGGSLLAKQAIF-SALEEQLAKQRKIPGSGEW 176
R QR+ G S++ G+ D N ++ G ++ + F S +E + K+ GS EW
Sbjct: 136 RCAQRMKGGSSVLGGIGDRRKVNRADDASGRAMYSMPPGFNSRKQESDVEPDKVRGSAEW 195
Query: 177 VERGDGFNGL----LLRRQMSFADVVQHEVVYEXXXXXXXXXXXXXNAFANGLEQLASSS 344
DG GL L +Q S A++ Q ++ NAF +E L S+
Sbjct: 196 --GNDGLIGLPGLGLGNKQKSLAEIFQDDMGRTTPVPGLPSRPASRNAFDENVEALGSAE 253
Query: 345 ---THF-----ASHKVCTSVDGEGFSAKSDNGHEKVGTSFCHNYASVVSSSLQRSNTMDT 500
TH S + + +G+G +A+S +G ++YA+ + +SL RS T D
Sbjct: 254 ADLTHLRRDLMTSDALRSGANGQGSAAQS------MGPPSSYSYAAALGASLSRSTTPDP 307
Query: 501 KHAARATSLCFPQIGS-RIDTPD-RITQSSSSFNVLPSDTVETDDVSASLSNINLSTSGS 674
+ ARA S C IG R+ + R S SSFN + S E+ D+ A+LS +NLS++G
Sbjct: 308 QVIARAPSPCLTPIGGGRVSASEKRGISSPSSFNAVSSGINESGDIVAALSTMNLSSNGV 367
Query: 675 IVDENITKSKILQKFDDSQNLLF 743
I DE S++ Q D QN LF
Sbjct: 368 IDDEPHLPSQVKQDVIDHQNYLF 390
>ref|XP_002283191.1| PREDICTED: pumilio homolog 1-like [Vitis vinifera]
Length = 1065
Score = 91.3 bits (225), Expect = 3e-16
Identities = 81/259 (31%), Positives = 116/259 (44%), Gaps = 12/259 (4%)
Frame = +3
Query: 3 RSTQRLLVGDSLMRGMNDG--ITNGGEEEDGGSLLAKQAIFSALEEQL-AKQRKIPGSGE 173
R QRL G S + G+ D + G S+ + F++ +E+ A K+ GS E
Sbjct: 123 RFAQRLKGGSSGLGGIGDRRKMNRNDSGSVGRSMYSMPPGFNSRKEETEADSEKLCGSAE 182
Query: 174 WVERGDGFNGL----LLRRQMSFADVVQHEVVYEXXXXXXXXXXXXXNAFANGLEQLASS 341
W GDG GL L +Q S A++ Q ++ NAF E L S
Sbjct: 183 W--GGDGLIGLSGLGLGSKQKSLAEIFQDDLGRTTPVSGHPSRPASRNAFDENAEPLGSV 240
Query: 342 ST---HFASHKVCTSVDGEGFSAKSDNGHEKVGTSFCHNYASVVSSSLQRSNTMDTKHAA 512
H V G S + + + +G + YASV+ SL RS T D + A
Sbjct: 241 EAELGHLRRELKSADVLRSGASVQGSSTVQNIGAPTSYTYASVLGGSLSRSTTPDPQLIA 300
Query: 513 RATSLCFPQIGS--RIDTPDRITQSSSSFNVLPSDTVETDDVSASLSNINLSTSGSIVDE 686
RA S C IG + R SSSFN +P E+ D+ A+LS ++LST+G I +E
Sbjct: 301 RAPSPCLTPIGGGRTAISEKRGINGSSSFNSVPPSMNESADLVAALSGMDLSTNGVIDEE 360
Query: 687 NITKSKILQKFDDSQNLLF 743
N S+I Q ++ Q+ LF
Sbjct: 361 NHLPSQIEQDVENHQSYLF 379