BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00036944
         (689 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003574395.1| PREDICTED: putative pentatricopeptide repeat...   240   3e-61
gb|EMT31462.1| hypothetical protein F775_18366 [Aegilops tauschii]    236   7e-60
ref|XP_002267486.1| PREDICTED: putative pentatricopeptide repeat...   227   3e-57
ref|XP_006465137.1| PREDICTED: putative pentatricopeptide repeat...   226   7e-57
ref|XP_006436351.1| hypothetical protein CICLE_v10033432mg [Citr...   224   2e-56
ref|XP_006436328.1| hypothetical protein CICLE_v10033582mg [Citr...   224   3e-56
gb|EOY20208.1| Pentatricopeptide repeat superfamily protein, put...   219   8e-55
gb|EOY20207.1| Pentatricopeptide repeat superfamily protein, put...   219   8e-55
gb|EAY79643.1| hypothetical protein OsI_34787 [Oryza sativa Indi...   217   2e-54
ref|XP_004229567.1| PREDICTED: putative pentatricopeptide repeat...   213   3e-53
gb|AAG46167.1|AC018727_19 unknown protein [Oryza sativa Japonica...   213   6e-53
gb|EEE51466.1| hypothetical protein OsJ_32592 [Oryza sativa Japo...   213   6e-53
gb|AAP55169.2| pentatricopeptide, putative, expressed [Oryza sat...   213   6e-53
ref|XP_006365279.1| PREDICTED: putative pentatricopeptide repeat...   212   1e-52
tpg|DAA46501.1| TPA: hypothetical protein ZEAMMB73_380894 [Zea m...   211   1e-52
ref|XP_004158095.1| PREDICTED: putative pentatricopeptide repeat...   207   2e-51
ref|XP_004135727.1| PREDICTED: putative pentatricopeptide repeat...   207   2e-51
ref|XP_006662641.1| PREDICTED: putative pentatricopeptide repeat...   206   7e-51
ref|XP_006601682.1| PREDICTED: putative pentatricopeptide repeat...   206   7e-51
ref|XP_006601680.1| PREDICTED: putative pentatricopeptide repeat...   204   2e-50

>ref|XP_003574395.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g16830-like [Brachypodium distachyon]
          Length = 623

 Score =  240 bits (612), Expect = 3e-61
 Identities = 115/228 (50%), Positives = 160/228 (70%)
 Frame = +2

Query: 2   FRAQKFDKVSVILDVMLSTKCSPDLVFYNVLIDCFAKLRRYDDAIEVFLSLKGMKLNPDA 181
           FRA + DKVS +L  M S  C+PDLV YNVL+DC  K RRYD+A++++L+L   ++ PDA
Sbjct: 283 FRAGRHDKVSELLGSMASNGCNPDLVLYNVLMDCMMKERRYDEALDIYLNLHQSQIKPDA 342

Query: 182 YTLSSLLFTLCSGRKLRNLPKLIDGLDVSVDLVACGSLISAFCKAGFPSQAIEVFVKMMD 361
           YTLS+L+  L     +  LP+LI G D+S DLVAC S++SA CK+GFPS+A++ ++  + 
Sbjct: 343 YTLSTLVHVLQLSHNIDLLPRLILGSDISYDLVACNSVLSALCKSGFPSEALQFYIDKIG 402

Query: 362 RGFSPDSYSYAGLINGLCISGRIERAVGVYHSILTNTANVDAYVHTAIVAGLVKEKEYRT 541
            G  PDSYSY GL++ LC  GRI+ A+ VY S+L +  + DAY+H++I+ GLV  ++   
Sbjct: 403 LGIRPDSYSYVGLLDSLCQLGRIDHAINVYRSVLASNPDSDAYIHSSILRGLVSRRQNNM 462

Query: 542 AIQLFRNAVLQDYHLDVVSYTVAITGLFRGCRYEEARSLFDQMKHSGV 685
           A  +FR AV Q+Y LDVV YT+ + GLFR    EEA  LFD+MKHSG+
Sbjct: 463 AFAIFREAVRQNYALDVVCYTIVLHGLFRAHLIEEACDLFDKMKHSGI 510



 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 4/168 (2%)
 Frame = +2

Query: 68  PDLVFYNVLIDCFAKLRRYDDAIEVFLSLKGMKLNPDAYTLSSLLFTLCSGRKLRNLPKL 247
           PD   Y  L+D   +L R D AI V+ S+     + DAY  SS+L  L S R+  N+   
Sbjct: 407 PDSYSYVGLLDSLCQLGRIDHAINVYRSVLASNPDSDAYIHSSILRGLVS-RRQNNMAFA 465

Query: 248 IDGLDV----SVDLVACGSLISAFCKAGFPSQAIEVFVKMMDRGFSPDSYSYAGLINGLC 415
           I    V    ++D+V    ++    +A    +A ++F KM   G +P++ +Y  ++ GLC
Sbjct: 466 IFREAVRQNYALDVVCYTIVLHGLFRAHLIEEACDLFDKMKHSGIAPNTCTYNVMLRGLC 525

Query: 416 ISGRIERAVGVYHSILTNTANVDAYVHTAIVAGLVKEKEYRTAIQLFR 559
            +  +     +   +      +D+     +V  LVK +   +AI L R
Sbjct: 526 RTQDMHAVTQLLGEMECTNVQMDSISFNVVVVLLVKLQHISSAIGLIR 573


>gb|EMT31462.1| hypothetical protein F775_18366 [Aegilops tauschii]
          Length = 945

 Score =  236 bits (601), Expect = 7e-60
 Identities = 117/228 (51%), Positives = 159/228 (69%)
 Frame = +2

Query: 2    FRAQKFDKVSVILDVMLSTKCSPDLVFYNVLIDCFAKLRRYDDAIEVFLSLKGMKLNPDA 181
            FRA + D  S +L  M S  C PDLV YNVL+DC  + RRYD+AI+++L L G ++ PDA
Sbjct: 605  FRAGRHDIASELLGSMASNGCIPDLVMYNVLMDCMMRERRYDEAIDIYLHLHGSQIKPDA 664

Query: 182  YTLSSLLFTLCSGRKLRNLPKLIDGLDVSVDLVACGSLISAFCKAGFPSQAIEVFVKMMD 361
            YTLS+L+  L   R +  LP+LI G D+S DLVAC S++SA CK+GFPS+A++ ++ M+ 
Sbjct: 665  YTLSTLVQVLQLSRNIDLLPRLILGSDISYDLVACNSMLSALCKSGFPSEALQFYIDMIG 724

Query: 362  RGFSPDSYSYAGLINGLCISGRIERAVGVYHSILTNTANVDAYVHTAIVAGLVKEKEYRT 541
             G  PDSYSY GL++ LC  GRI+ AV +Y S++T+  + DAYVH AI+ GLV+  +   
Sbjct: 725  LGIRPDSYSYVGLLDSLCHLGRIDHAVNLYRSVVTSNLDSDAYVHAAILRGLVRRGQNIM 784

Query: 542  AIQLFRNAVLQDYHLDVVSYTVAITGLFRGCRYEEARSLFDQMKHSGV 685
            A ++ R AV Q+Y LD V YT+ + GLFRG   +EAR LFD+MK SGV
Sbjct: 785  AFRILREAVRQNYALDNVCYTIVLHGLFRGHFVQEARDLFDKMKDSGV 832


>ref|XP_002267486.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g16830 [Vitis vinifera] gi|297735747|emb|CBI18434.3|
           unnamed protein product [Vitis vinifera]
          Length = 659

 Score =  227 bits (578), Expect = 3e-57
 Identities = 111/218 (50%), Positives = 154/218 (70%), Gaps = 1/218 (0%)
 Frame = +2

Query: 35  ILDVMLSTKCSPDLVFYNVLIDCFAKLRRYDDAIEVFLSLKGMKLNPDAYTLSSLLFTLC 214
           +L +M +  C  DLV YNVLIDC +K+ RYDDA+ +F SL   K+ PD+YT SS+L  +C
Sbjct: 318 VLRIMGTKGCDYDLVLYNVLIDCLSKVGRYDDALGIFFSLPKRKMVPDSYTFSSILSAIC 377

Query: 215 SGRKLRNLPKLID-GLDVSVDLVACGSLISAFCKAGFPSQAIEVFVKMMDRGFSPDSYSY 391
             ++   LPKL   GL+V  DLV C SL+S FCKAGFPS A+E +  M+DRGF  D YS+
Sbjct: 378 LSQRFSLLPKLFSSGLEVHTDLVVCNSLLSYFCKAGFPSLAVEFYNDMLDRGFMIDQYSF 437

Query: 392 AGLINGLCISGRIERAVGVYHSILTNTANVDAYVHTAIVAGLVKEKEYRTAIQLFRNAVL 571
            GL++GLC SGR++ AV VY  IL N +++DA++HT I+ GL+K  ++  A++LF+ A++
Sbjct: 438 VGLLSGLCGSGRVDEAVNVYSGILVNHSDLDAHIHTVIIGGLIKAGKFHRAVRLFKKAMV 497

Query: 572 QDYHLDVVSYTVAITGLFRGCRYEEARSLFDQMKHSGV 685
           + Y LD VSYTVAI GL +G R  EA  L++QMK +G+
Sbjct: 498 ERYTLDAVSYTVAIYGLLKGGRTGEACILYNQMKEAGL 535



 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 50/195 (25%), Positives = 97/195 (49%), Gaps = 5/195 (2%)
 Frame = +2

Query: 26  VSVILDVMLSTKCSPDLVFYNVLIDCFAKLRRYDDAIEVFLSLKGMKLNPDAYTLSSLLF 205
           V  +L +ML     P +  ++++++CF K+ R+ +A +V L L      P + T+ S+L 
Sbjct: 210 VGDVLRMMLRKGYCPSVEIFSMVLNCFCKVGRFAEAFQV-LGLMATLGIPISVTVWSILI 268

Query: 206 TLCS-----GRKLRNLPKLIDGLDVSVDLVACGSLISAFCKAGFPSQAIEVFVKMMDRGF 370
                    GR    L K+++    S ++V   +LI  F ++G  S+A++V   M  +G 
Sbjct: 269 DGYRRIGKIGRAGNLLEKMVE-TGCSPNVVTYTTLIKGFMESGMVSRALDVLRIMGTKGC 327

Query: 371 SPDSYSYAGLINGLCISGRIERAVGVYHSILTNTANVDAYVHTAIVAGLVKEKEYRTAIQ 550
             D   Y  LI+ L   GR + A+G++ S+       D+Y  ++I++ +   + +    +
Sbjct: 328 DYDLVLYNVLIDCLSKVGRYDDALGIFFSLPKRKMVPDSYTFSSILSAICLSQRFSLLPK 387

Query: 551 LFRNAVLQDYHLDVV 595
           LF + +  + H D+V
Sbjct: 388 LFSSGL--EVHTDLV 400


>ref|XP_006465137.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g16830-like isoform X1 [Citrus sinensis]
           gi|568821338|ref|XP_006465138.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At1g16830-like isoform X2 [Citrus sinensis]
           gi|568821340|ref|XP_006465139.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At1g16830-like isoform X3 [Citrus sinensis]
          Length = 645

 Score =  226 bits (575), Expect = 7e-57
 Identities = 114/226 (50%), Positives = 156/226 (69%)
 Frame = +2

Query: 8   AQKFDKVSVILDVMLSTKCSPDLVFYNVLIDCFAKLRRYDDAIEVFLSLKGMKLNPDAYT 187
           A+ F      LD++ S   +PDLVF+NVLIDC +K+  YDDA++V+  L  +KL PD+YT
Sbjct: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362

Query: 188 LSSLLFTLCSGRKLRNLPKLIDGLDVSVDLVACGSLISAFCKAGFPSQAIEVFVKMMDRG 367
             SLL T+C   +   LPKL+ GL+V  DLV   +L+S FCKAGFP+QA++++  M+D+G
Sbjct: 363 FCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422

Query: 368 FSPDSYSYAGLINGLCISGRIERAVGVYHSILTNTANVDAYVHTAIVAGLVKEKEYRTAI 547
           F+PD+YS+ GL+ GLC + +I+ A+ VY  I+ N   V+A+VHTAIV  L++      AI
Sbjct: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPTVNAHVHTAIVDRLIEAGRCHKAI 482

Query: 548 QLFRNAVLQDYHLDVVSYTVAITGLFRGCRYEEARSLFDQMKHSGV 685
           QLFR A+++ Y LDVVSYTVAI GL  G R EEA  L+ QMKH  V
Sbjct: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAV 528



 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 45/197 (22%), Positives = 89/197 (45%), Gaps = 7/197 (3%)
 Frame = +2

Query: 23  KVSVILDVMLSTKCSPDLVFYNVLIDCFAKLRRYDDAIEVFLSLKGMKLNPDAYTLSSLL 202
           + S++  ++   +   DLV YN L+  F K    + A++++ ++      PD Y+   LL
Sbjct: 375 RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434

Query: 203 FTLCSGRKLRNLPKLIDGL---DVSVDLVACGSLISAFCKAGFPSQAIEVFVKMMDRGFS 373
             LC  RK+     +  G+   + +V+     +++    +AG   +AI++F + +   + 
Sbjct: 435 RGLCGARKIDEAINVYQGIVMNNPTVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494

Query: 374 PDSYSYAGLINGLCISGRIERAVGVYHSILTNTANVDAYVHTAIVAGLVKEKEYRTAIQL 553
            D  SY   I GL   GR E A  +Y  +       +AY +  ++    KE+  +   +L
Sbjct: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554

Query: 554 FRNA----VLQDYHLDV 592
            ++     +  DYH  +
Sbjct: 555 LQDVIDARIELDYHTSI 571


>ref|XP_006436351.1| hypothetical protein CICLE_v10033432mg [Citrus clementina]
           gi|557538547|gb|ESR49591.1| hypothetical protein
           CICLE_v10033432mg [Citrus clementina]
          Length = 512

 Score =  224 bits (572), Expect = 2e-56
 Identities = 114/226 (50%), Positives = 156/226 (69%)
 Frame = +2

Query: 8   AQKFDKVSVILDVMLSTKCSPDLVFYNVLIDCFAKLRRYDDAIEVFLSLKGMKLNPDAYT 187
           A+ F      LD++ S   +PDLVF+NVLIDC +K+  YDDA++V+  L  +KL PD+YT
Sbjct: 170 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 229

Query: 188 LSSLLFTLCSGRKLRNLPKLIDGLDVSVDLVACGSLISAFCKAGFPSQAIEVFVKMMDRG 367
             SLL T+C   +   LPKL+ GL+V  DLV   +L+S FCKAGFP+QA++++  M+D+G
Sbjct: 230 FCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 289

Query: 368 FSPDSYSYAGLINGLCISGRIERAVGVYHSILTNTANVDAYVHTAIVAGLVKEKEYRTAI 547
           F+PD+YS+ GL+ GLC + +I+ A+ VY  I+ N   V+A+VHTAIV  L++      AI
Sbjct: 290 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEVGRCHKAI 349

Query: 548 QLFRNAVLQDYHLDVVSYTVAITGLFRGCRYEEARSLFDQMKHSGV 685
           QLFR A+++ Y LDVVSYTVAI GL  G R EEA  L+ QMKH  V
Sbjct: 350 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAV 395



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 44/197 (22%), Positives = 87/197 (44%), Gaps = 7/197 (3%)
 Frame = +2

Query: 23  KVSVILDVMLSTKCSPDLVFYNVLIDCFAKLRRYDDAIEVFLSLKGMKLNPDAYTLSSLL 202
           + S++  ++   +   DLV YN L+  F K    + A++++ ++      PD Y+   LL
Sbjct: 242 RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 301

Query: 203 FTLCSGRKLRNLPKLIDGL---DVSVDLVACGSLISAFCKAGFPSQAIEVFVKMMDRGFS 373
             LC  RK+     +  G+   + +V+     +++    + G   +AI++F + +   + 
Sbjct: 302 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEVGRCHKAIQLFRRAIVEKYP 361

Query: 374 PDSYSYAGLINGLCISGRIERAVGVYHSILTNTANVDAYVHTAIVAGLVKEKEYRTAIQL 553
            D  SY   I GL   GR E A  +Y  +       +AY +  ++    KE+  +    L
Sbjct: 362 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKWL 421

Query: 554 FRNA----VLQDYHLDV 592
            ++     +  DYH  +
Sbjct: 422 LQDVIDARIELDYHTSI 438


>ref|XP_006436328.1| hypothetical protein CICLE_v10033582mg [Citrus clementina]
           gi|557538524|gb|ESR49568.1| hypothetical protein
           CICLE_v10033582mg [Citrus clementina]
          Length = 512

 Score =  224 bits (570), Expect = 3e-56
 Identities = 114/226 (50%), Positives = 156/226 (69%)
 Frame = +2

Query: 8   AQKFDKVSVILDVMLSTKCSPDLVFYNVLIDCFAKLRRYDDAIEVFLSLKGMKLNPDAYT 187
           A+ F      LD++ S   +PDLVF+NVLIDC +K+  YDDA++V+  L  +KL PD+YT
Sbjct: 170 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 229

Query: 188 LSSLLFTLCSGRKLRNLPKLIDGLDVSVDLVACGSLISAFCKAGFPSQAIEVFVKMMDRG 367
             SLL T+C   +   LPKL+ GL+V  DLV   +L+S FCKAGFP+QA++++  M+D+G
Sbjct: 230 FCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 289

Query: 368 FSPDSYSYAGLINGLCISGRIERAVGVYHSILTNTANVDAYVHTAIVAGLVKEKEYRTAI 547
           F+PD+YS+ GL+ GLC + +I+ A+ VY  I+ N   V+A+VHTAIV  L++      AI
Sbjct: 290 FTPDNYSFVGLLCGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 349

Query: 548 QLFRNAVLQDYHLDVVSYTVAITGLFRGCRYEEARSLFDQMKHSGV 685
           QLFR A+++ Y LDVVSYTVAI GL  G R EEA  L+ QMKH  V
Sbjct: 350 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAV 395



 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 45/197 (22%), Positives = 89/197 (45%), Gaps = 7/197 (3%)
 Frame = +2

Query: 23  KVSVILDVMLSTKCSPDLVFYNVLIDCFAKLRRYDDAIEVFLSLKGMKLNPDAYTLSSLL 202
           + S++  ++   +   DLV YN L+  F K    + A++++ ++      PD Y+   LL
Sbjct: 242 RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 301

Query: 203 FTLCSGRKLRNLPKLIDGL---DVSVDLVACGSLISAFCKAGFPSQAIEVFVKMMDRGFS 373
             LC  RK+     +  G+   + +V+     +++    +AG   +AI++F + +   + 
Sbjct: 302 CGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 361

Query: 374 PDSYSYAGLINGLCISGRIERAVGVYHSILTNTANVDAYVHTAIVAGLVKEKEYRTAIQL 553
            D  SY   I GL   GR E A  +Y  +       +AY +  ++    KE+  +   +L
Sbjct: 362 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 421

Query: 554 FRNA----VLQDYHLDV 592
            ++     +  DYH  +
Sbjct: 422 LQDVIDARIELDYHTSI 438


>gb|EOY20208.1| Pentatricopeptide repeat superfamily protein, putative isoform 2
           [Theobroma cacao]
          Length = 657

 Score =  219 bits (557), Expect = 8e-55
 Identities = 111/218 (50%), Positives = 149/218 (68%)
 Frame = +2

Query: 35  ILDVMLSTKCSPDLVFYNVLIDCFAKLRRYDDAIEVFLSLKGMKLNPDAYTLSSLLFTLC 214
           IL+ M S    PDL+  NVLIDC +K+ RYDDA +VF+SL   KL PD+YT  SLL  +C
Sbjct: 317 ILNRMESDGYVPDLILCNVLIDCLSKIGRYDDAFDVFVSLPERKLLPDSYTFCSLLSNIC 376

Query: 215 SGRKLRNLPKLIDGLDVSVDLVACGSLISAFCKAGFPSQAIEVFVKMMDRGFSPDSYSYA 394
             R+   LPK+  GL +  DLV C SL++ FCKAG+P  A+E++  M+DRGF+PD YS+ 
Sbjct: 377 LSRRFSLLPKIASGLAIEGDLVVCNSLLNYFCKAGYPLHAVELYDYMLDRGFTPDKYSFV 436

Query: 395 GLINGLCISGRIERAVGVYHSILTNTANVDAYVHTAIVAGLVKEKEYRTAIQLFRNAVLQ 574
           GL++GLC + RI+ AV VY SI+     +DA+VHT I+  L++  +Y  AI+LFR A+++
Sbjct: 437 GLLSGLCGARRIDEAVNVYQSIIMYCPGLDAHVHTIIIDRLIRVGKYHRAIKLFRRALVE 496

Query: 575 DYHLDVVSYTVAITGLFRGCRYEEARSLFDQMKHSGVL 688
            Y LDVVSY VAI GL +  R  EA +L+ QMK  GVL
Sbjct: 497 KYPLDVVSYNVAIFGLLKSGRVGEAFTLYSQMKELGVL 534



 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 7/213 (3%)
 Frame = +2

Query: 71   DLVFYNVLIDCFAKLRRYDDAIEVFLSLKGMKLNPDAYTLSSLLFTLCSGRKL------- 229
            DLV  N L++ F K      A+E++  +      PD Y+   LL  LC  R++       
Sbjct: 396  DLVVCNSLLNYFCKAGYPLHAVELYDYMLDRGFTPDKYSFVGLLSGLCGARRIDEAVNVY 455

Query: 230  RNLPKLIDGLDVSVDLVACGSLISAFCKAGFPSQAIEVFVKMMDRGFSPDSYSYAGLING 409
            +++     GLD  V  +    LI    + G   +AI++F + +   +  D  SY   I G
Sbjct: 456  QSIIMYCPGLDAHVHTIIIDRLI----RVGKYHRAIKLFRRALVEKYPLDVVSYNVAIFG 511

Query: 410  LCISGRIERAVGVYHSILTNTANVDAYVHTAIVAGLVKEKEYRTAIQLFRNAVLQDYHLD 589
            L  SGR+  A  +Y  +       +A+ +  +++G  KE++ +   QL +     +  LD
Sbjct: 512  LLKSGRVGEAFTLYSQMKELGVLPNAHTYNLVISGFCKERDLKMVKQLLQEISEAEVELD 571

Query: 590  VVSYTVAITGLFRGCRYEEARSLFDQMKHSGVL 688
              +       LFR   Y  A + F +M +SG++
Sbjct: 572  HNTVNSVTKLLFRSYPYPSALNQFIEMWNSGLI 604



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 53/225 (23%), Positives = 102/225 (45%), Gaps = 5/225 (2%)
 Frame = +2

Query: 2   FRAQKFDKVSVILDVMLSTKCSPDLVFYNVLIDCFAKLRRYDDAIEVFLSLKGMKLNPDA 181
           +R   +  V    + M +   +P+    NV++D   K+   D AI+V L   G    P+ 
Sbjct: 135 WRGGLYGMVFETFEEMATVGFTPNTFARNVIMDVLFKIGHVDVAIKV-LKETGF---PNF 190

Query: 182 YTLSSLLFTLCSGRKLRNLPKLI-----DGLDVSVDLVACGSLISAFCKAGFPSQAIEVF 346
            T ++ L  LC  R L N+  +I     +G   +V  +    +++ FCK G  ++A +V 
Sbjct: 191 LTFNTALCNLCKLRDLSNMKYVIRRMFREGHYPNVRTLEM--ILNCFCKMGRLAEAYQVL 248

Query: 347 VKMMDRGFSPDSYSYAGLINGLCISGRIERAVGVYHSILTNTANVDAYVHTAIVAGLVKE 526
             M+  G S    +++ LI+G C   + + A  ++  +L    + +  ++T ++ G +  
Sbjct: 249 SLMLILGVSVSVNAWSLLIDGFCRLRQPDMANDLFIKMLGTGCSPNVVIYTTLIKGFLDS 308

Query: 527 KEYRTAIQLFRNAVLQDYHLDVVSYTVAITGLFRGCRYEEARSLF 661
           +   TA  +        Y  D++   V I  L +  RY++A  +F
Sbjct: 309 QMVSTAFSILNRMESDGYVPDLILCNVLIDCLSKIGRYDDAFDVF 353


>gb|EOY20207.1| Pentatricopeptide repeat superfamily protein, putative isoform 1
            [Theobroma cacao]
          Length = 695

 Score =  219 bits (557), Expect = 8e-55
 Identities = 111/218 (50%), Positives = 149/218 (68%)
 Frame = +2

Query: 35   ILDVMLSTKCSPDLVFYNVLIDCFAKLRRYDDAIEVFLSLKGMKLNPDAYTLSSLLFTLC 214
            IL+ M S    PDL+  NVLIDC +K+ RYDDA +VF+SL   KL PD+YT  SLL  +C
Sbjct: 355  ILNRMESDGYVPDLILCNVLIDCLSKIGRYDDAFDVFVSLPERKLLPDSYTFCSLLSNIC 414

Query: 215  SGRKLRNLPKLIDGLDVSVDLVACGSLISAFCKAGFPSQAIEVFVKMMDRGFSPDSYSYA 394
              R+   LPK+  GL +  DLV C SL++ FCKAG+P  A+E++  M+DRGF+PD YS+ 
Sbjct: 415  LSRRFSLLPKIASGLAIEGDLVVCNSLLNYFCKAGYPLHAVELYDYMLDRGFTPDKYSFV 474

Query: 395  GLINGLCISGRIERAVGVYHSILTNTANVDAYVHTAIVAGLVKEKEYRTAIQLFRNAVLQ 574
            GL++GLC + RI+ AV VY SI+     +DA+VHT I+  L++  +Y  AI+LFR A+++
Sbjct: 475  GLLSGLCGARRIDEAVNVYQSIIMYCPGLDAHVHTIIIDRLIRVGKYHRAIKLFRRALVE 534

Query: 575  DYHLDVVSYTVAITGLFRGCRYEEARSLFDQMKHSGVL 688
             Y LDVVSY VAI GL +  R  EA +L+ QMK  GVL
Sbjct: 535  KYPLDVVSYNVAIFGLLKSGRVGEAFTLYSQMKELGVL 572



 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 7/213 (3%)
 Frame = +2

Query: 71   DLVFYNVLIDCFAKLRRYDDAIEVFLSLKGMKLNPDAYTLSSLLFTLCSGRKL------- 229
            DLV  N L++ F K      A+E++  +      PD Y+   LL  LC  R++       
Sbjct: 434  DLVVCNSLLNYFCKAGYPLHAVELYDYMLDRGFTPDKYSFVGLLSGLCGARRIDEAVNVY 493

Query: 230  RNLPKLIDGLDVSVDLVACGSLISAFCKAGFPSQAIEVFVKMMDRGFSPDSYSYAGLING 409
            +++     GLD  V  +    LI    + G   +AI++F + +   +  D  SY   I G
Sbjct: 494  QSIIMYCPGLDAHVHTIIIDRLI----RVGKYHRAIKLFRRALVEKYPLDVVSYNVAIFG 549

Query: 410  LCISGRIERAVGVYHSILTNTANVDAYVHTAIVAGLVKEKEYRTAIQLFRNAVLQDYHLD 589
            L  SGR+  A  +Y  +       +A+ +  +++G  KE++ +   QL +     +  LD
Sbjct: 550  LLKSGRVGEAFTLYSQMKELGVLPNAHTYNLVISGFCKERDLKMVKQLLQEISEAEVELD 609

Query: 590  VVSYTVAITGLFRGCRYEEARSLFDQMKHSGVL 688
              +       LFR   Y  A + F +M +SG++
Sbjct: 610  HNTVNSVTKLLFRSYPYPSALNQFIEMWNSGLI 642



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 53/225 (23%), Positives = 102/225 (45%), Gaps = 5/225 (2%)
 Frame = +2

Query: 2   FRAQKFDKVSVILDVMLSTKCSPDLVFYNVLIDCFAKLRRYDDAIEVFLSLKGMKLNPDA 181
           +R   +  V    + M +   +P+    NV++D   K+   D AI+V L   G    P+ 
Sbjct: 173 WRGGLYGMVFETFEEMATVGFTPNTFARNVIMDVLFKIGHVDVAIKV-LKETGF---PNF 228

Query: 182 YTLSSLLFTLCSGRKLRNLPKLI-----DGLDVSVDLVACGSLISAFCKAGFPSQAIEVF 346
            T ++ L  LC  R L N+  +I     +G   +V  +    +++ FCK G  ++A +V 
Sbjct: 229 LTFNTALCNLCKLRDLSNMKYVIRRMFREGHYPNVRTLEM--ILNCFCKMGRLAEAYQVL 286

Query: 347 VKMMDRGFSPDSYSYAGLINGLCISGRIERAVGVYHSILTNTANVDAYVHTAIVAGLVKE 526
             M+  G S    +++ LI+G C   + + A  ++  +L    + +  ++T ++ G +  
Sbjct: 287 SLMLILGVSVSVNAWSLLIDGFCRLRQPDMANDLFIKMLGTGCSPNVVIYTTLIKGFLDS 346

Query: 527 KEYRTAIQLFRNAVLQDYHLDVVSYTVAITGLFRGCRYEEARSLF 661
           +   TA  +        Y  D++   V I  L +  RY++A  +F
Sbjct: 347 QMVSTAFSILNRMESDGYVPDLILCNVLIDCLSKIGRYDDAFDVF 391


>gb|EAY79643.1| hypothetical protein OsI_34787 [Oryza sativa Indica Group]
          Length = 631

 Score =  217 bits (553), Expect = 2e-54
 Identities = 110/229 (48%), Positives = 154/229 (67%), Gaps = 1/229 (0%)
 Frame = +2

Query: 2   FRAQKFDKVSVILDVMLSTKCSPDLVFYNVLIDCFAKLRRYDDAIEVFLSLKGMKLNPDA 181
           +RA + D  + +   M ST CSPDLV +NVL+DC  K +RYD A+ V+L+L   ++ PDA
Sbjct: 290 YRAGRHDIATELFASMSSTNCSPDLVLHNVLMDCMTKDKRYDAALGVYLNLHESQMKPDA 349

Query: 182 YTLSSLLFTLCSGRKLRNLPKL-IDGLDVSVDLVACGSLISAFCKAGFPSQAIEVFVKMM 358
           YTLS+L+  L   R +  LP+L +D  D+  DLVAC S+++A CK+GFPSQA++ F+ M+
Sbjct: 350 YTLSTLVRALHLSRNVSLLPRLFLDSADIPYDLVACNSVLNALCKSGFPSQAVQFFINMI 409

Query: 359 DRGFSPDSYSYAGLINGLCISGRIERAVGVYHSILTNTANVDAYVHTAIVAGLVKEKEYR 538
                PDSYSY GL++ LC  GRI+ A+ VYHSI+++  + +AYVH AI+ GLVK+   R
Sbjct: 410 KCDIRPDSYSYVGLLDSLCQLGRIDHAINVYHSIVSSDPDSNAYVHAAILCGLVKKGHNR 469

Query: 539 TAIQLFRNAVLQDYHLDVVSYTVAITGLFRGCRYEEARSLFDQMKHSGV 685
            A+ +   AV Q+Y LD V YTV + GL +    EEA  LFD+MK SG+
Sbjct: 470 MALMILNEAVRQNYALDAVCYTVVLHGLLQAHLIEEACMLFDKMKRSGM 518



 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 49/214 (22%), Positives = 99/214 (46%), Gaps = 20/214 (9%)
 Frame = +2

Query: 29  SVILDVMLSTK------C------SPDLVFYNVLIDCFAKLRRYDDAIEVFLSLKGMKLN 172
           +V+LDV+L T+      C      SP+ + Y +L+    +   +      FL++      
Sbjct: 147 NVVLDVLLRTRHHHSALCFLRDNPSPNYLTYAILLTHLCRSGNWPGVRACFLAMLHQGFL 206

Query: 173 PDAYTLSSLLFTLCSGRKLRNLPKL--------IDGLDVSVDLVACGSLISAFCKAGFPS 328
           P A +L+++ F  C+  KL    +L        + G  ++  +  C  LI+  C+ G   
Sbjct: 207 PSAASLNAV-FACCT--KLAATSELLQLLGFTLVSGYQLTSAMWTC--LIARLCREGKLD 261

Query: 329 QAIEVFVKMMDRGFSPDSYSYAGLINGLCISGRIERAVGVYHSILTNTANVDAYVHTAIV 508
           +AI +  KM+  G  P   +Y  ++  L  +GR + A  ++ S+ +   + D  +H  ++
Sbjct: 262 EAIRMLAKMLASGSPPTVVTYTPIVRALYRAGRHDIATELFASMSSTNCSPDLVLHNVLM 321

Query: 509 AGLVKEKEYRTAIQLFRNAVLQDYHLDVVSYTVA 610
             + K+K Y  A+ ++ N  L +  +   +YT++
Sbjct: 322 DCMTKDKRYDAALGVYLN--LHESQMKPDAYTLS 353


>ref|XP_004229567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g16830-like [Solanum lycopersicum]
          Length = 715

 Score =  213 bits (543), Expect = 3e-53
 Identities = 109/228 (47%), Positives = 146/228 (64%)
 Frame = +2

Query: 2   FRAQKFDKVSVILDVMLSTKCSPDLVFYNVLIDCFAKLRRYDDAIEVFLSLKGMKLNPDA 181
           F +Q   K   IL+ M S  CSPDLV  NVLI C +K+ RY+DAI  F  L+  +L+PD+
Sbjct: 312 FESQMPSKAFGILNTMESKGCSPDLVLCNVLIHCLSKMGRYEDAINAFFLLREQRLSPDS 371

Query: 182 YTLSSLLFTLCSGRKLRNLPKLIDGLDVSVDLVACGSLISAFCKAGFPSQAIEVFVKMMD 361
           YTL SL+ T+C  ++   LP LI G  +  DLVAC S +S FCKAG+P+ AIE +  M+D
Sbjct: 372 YTLCSLITTVCLSKQFVELPLLITGFKIQPDLVACNSFLSYFCKAGYPAGAIEFYNDMID 431

Query: 362 RGFSPDSYSYAGLINGLCISGRIERAVGVYHSILTNTANVDAYVHTAIVAGLVKEKEYRT 541
           RGF  D Y++AGL+ GLC SGRI  AV VYH ++ +   +D+++ T I+ GL+K  ++  
Sbjct: 432 RGFEADKYTFAGLLTGLCRSGRIAEAVKVYHGLVRSHVGLDSHIITVIINGLIKSGKFHK 491

Query: 542 AIQLFRNAVLQDYHLDVVSYTVAITGLFRGCRYEEARSLFDQMKHSGV 685
           AI L R A      LD VSYT+AI+GL  G    EA +LF QMK  G+
Sbjct: 492 AISLIRKAASGKSQLDDVSYTIAISGLLTGGEVREAYALFRQMKEVGL 539



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 49/202 (24%), Positives = 91/202 (45%), Gaps = 4/202 (1%)
 Frame = +2

Query: 14  KFDKVSVILDVMLSTKCSPDLVFYNVLIDCFAKLRRYDDAIEVFLSLKGMKLNPDAYTLS 193
           K ++V V L V+  T+  P+ + Y++ +    KL    +  +V   +   +  P+  T  
Sbjct: 177 KIERVEVALRVLKETEV-PNFLSYSIAVCNLCKLNDLVNLQDVLTVMLRKRYYPNEETFF 235

Query: 194 SLLFTLCSGRKLRNLPKLIDGLDVSVDLVAC----GSLISAFCKAGFPSQAIEVFVKMMD 361
            +L   C G  +    +++ GL + + +  C      LI   CKAG    A  +  KM++
Sbjct: 236 VILHCYCKGGCIAEAIQIL-GLMIVLGVPICERIWSILIDVHCKAGNMDAASHLLKKMVE 294

Query: 362 RGFSPDSYSYAGLINGLCISGRIERAVGVYHSILTNTANVDAYVHTAIVAGLVKEKEYRT 541
            G+SP+  +   LI G   S    +A G+ +++ +   + D  +   ++  L K   Y  
Sbjct: 295 SGYSPNVVTCTSLIKGFFESQMPSKAFGILNTMESKGCSPDLVLCNVLIHCLSKMGRYED 354

Query: 542 AIQLFRNAVLQDYHLDVVSYTV 607
           AI  F   +L++  L   SYT+
Sbjct: 355 AINAF--FLLREQRLSPDSYTL 374


>gb|AAG46167.1|AC018727_19 unknown protein [Oryza sativa Japonica Group]
          Length = 601

 Score =  213 bits (541), Expect = 6e-53
 Identities = 109/229 (47%), Positives = 153/229 (66%), Gaps = 1/229 (0%)
 Frame = +2

Query: 2   FRAQKFDKVSVILDVMLSTKCSPDLVFYNVLIDCFAKLRRYDDAIEVFLSLKGMKLNPDA 181
           +RA + D  + +   M ST CSPDLV +NVL+DC  K +RYD A+ V+L+L   ++ PDA
Sbjct: 290 YRAGRHDIATELFASMSSTNCSPDLVLHNVLMDCMTKDKRYDAALGVYLNLHESQMKPDA 349

Query: 182 YTLSSLLFTLCSGRKLRNLPKL-IDGLDVSVDLVACGSLISAFCKAGFPSQAIEVFVKMM 358
           YTLS+L+  L   R +  LP+L +D  D+  DLVAC S+++A  K+GFPSQA++ F+ M+
Sbjct: 350 YTLSTLVRALHLSRNVSLLPRLFLDSADIPYDLVACNSVLNALRKSGFPSQAVQFFINMI 409

Query: 359 DRGFSPDSYSYAGLINGLCISGRIERAVGVYHSILTNTANVDAYVHTAIVAGLVKEKEYR 538
                PDSYSY GL++ LC  GRI+ A+ VYHSI+++  + +AYVH AI+ GLVK+   R
Sbjct: 410 KCDIRPDSYSYVGLLDSLCQLGRIDHAINVYHSIVSSDPDSNAYVHAAILCGLVKKGHNR 469

Query: 539 TAIQLFRNAVLQDYHLDVVSYTVAITGLFRGCRYEEARSLFDQMKHSGV 685
            A+ +   AV Q+Y LD V YTV + GL +    EEA  LFD+MK SG+
Sbjct: 470 MALMILNEAVRQNYALDAVCYTVVLHGLLQAHLIEEACMLFDKMKRSGM 518



 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 49/214 (22%), Positives = 99/214 (46%), Gaps = 20/214 (9%)
 Frame = +2

Query: 29  SVILDVMLSTK------C------SPDLVFYNVLIDCFAKLRRYDDAIEVFLSLKGMKLN 172
           +V+LDV+L T+      C      SP+ + Y +L+    +   +      FL++      
Sbjct: 147 NVVLDVLLRTRHHHSALCFLRDNPSPNYLTYAILLTHLCRSGNWPGVRACFLAMLHQGFL 206

Query: 173 PDAYTLSSLLFTLCSGRKLRNLPKL--------IDGLDVSVDLVACGSLISAFCKAGFPS 328
           P A +L+++ F  C+  KL    +L        + G  ++  +  C  LI+  C+ G   
Sbjct: 207 PSAASLNAV-FACCT--KLAATSELLQLLGFTLVSGYQLTSAMWTC--LIARLCREGKLD 261

Query: 329 QAIEVFVKMMDRGFSPDSYSYAGLINGLCISGRIERAVGVYHSILTNTANVDAYVHTAIV 508
           +AI +  KM+  G  P   +Y  ++  L  +GR + A  ++ S+ +   + D  +H  ++
Sbjct: 262 EAIRMLAKMLASGSPPTVVTYTPIVRALYRAGRHDIATELFASMSSTNCSPDLVLHNVLM 321

Query: 509 AGLVKEKEYRTAIQLFRNAVLQDYHLDVVSYTVA 610
             + K+K Y  A+ ++ N  L +  +   +YT++
Sbjct: 322 DCMTKDKRYDAALGVYLN--LHESQMKPDAYTLS 353


>gb|EEE51466.1| hypothetical protein OsJ_32592 [Oryza sativa Japonica Group]
          Length = 706

 Score =  213 bits (541), Expect = 6e-53
 Identities = 109/229 (47%), Positives = 153/229 (66%), Gaps = 1/229 (0%)
 Frame = +2

Query: 2    FRAQKFDKVSVILDVMLSTKCSPDLVFYNVLIDCFAKLRRYDDAIEVFLSLKGMKLNPDA 181
            +RA + D  + +   M ST CSPDLV +NVL+DC  K +RYD A+ V+L+L   ++ PDA
Sbjct: 365  YRAGRHDIATELFASMSSTNCSPDLVLHNVLMDCMTKDKRYDAALGVYLNLHESQMKPDA 424

Query: 182  YTLSSLLFTLCSGRKLRNLPKL-IDGLDVSVDLVACGSLISAFCKAGFPSQAIEVFVKMM 358
            YTLS+L+  L   R +  LP+L +D  D+  DLVAC S+++A  K+GFPSQA++ F+ M+
Sbjct: 425  YTLSTLVRALHLSRNVSLLPRLFLDSADIPYDLVACNSVLNALRKSGFPSQAVQFFINMI 484

Query: 359  DRGFSPDSYSYAGLINGLCISGRIERAVGVYHSILTNTANVDAYVHTAIVAGLVKEKEYR 538
                 PDSYSY GL++ LC  GRI+ A+ VYHSI+++  + +AYVH AI+ GLVK+   R
Sbjct: 485  KCDIRPDSYSYVGLLDSLCQLGRIDHAINVYHSIVSSDPDSNAYVHAAILCGLVKKGHNR 544

Query: 539  TAIQLFRNAVLQDYHLDVVSYTVAITGLFRGCRYEEARSLFDQMKHSGV 685
             A+ +   AV Q+Y LD V YTV + GL +    EEA  LFD+MK SG+
Sbjct: 545  MALMILNEAVRQNYALDAVCYTVVLHGLLQAHLIEEACMLFDKMKRSGM 593



 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 49/214 (22%), Positives = 99/214 (46%), Gaps = 20/214 (9%)
 Frame = +2

Query: 29  SVILDVMLSTK------C------SPDLVFYNVLIDCFAKLRRYDDAIEVFLSLKGMKLN 172
           +V+LDV+L T+      C      SP+ + Y +L+    +   +      FL++      
Sbjct: 222 NVVLDVLLRTRHHHSALCFLRDNPSPNYLTYAILLTHLCRSGNWPGVRACFLAMLHQGFL 281

Query: 173 PDAYTLSSLLFTLCSGRKLRNLPKL--------IDGLDVSVDLVACGSLISAFCKAGFPS 328
           P A +L+++ F  C+  KL    +L        + G  ++  +  C  LI+  C+ G   
Sbjct: 282 PSAASLNAV-FACCT--KLAATSELLQLLGFTLVSGYQLTSAMWTC--LIARLCREGKLD 336

Query: 329 QAIEVFVKMMDRGFSPDSYSYAGLINGLCISGRIERAVGVYHSILTNTANVDAYVHTAIV 508
           +AI +  KM+  G  P   +Y  ++  L  +GR + A  ++ S+ +   + D  +H  ++
Sbjct: 337 EAIRMLAKMLASGSPPTVVTYTPIVRALYRAGRHDIATELFASMSSTNCSPDLVLHNVLM 396

Query: 509 AGLVKEKEYRTAIQLFRNAVLQDYHLDVVSYTVA 610
             + K+K Y  A+ ++ N  L +  +   +YT++
Sbjct: 397 DCMTKDKRYDAALGVYLN--LHESQMKPDAYTLS 428


>gb|AAP55169.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 631

 Score =  213 bits (541), Expect = 6e-53
 Identities = 109/229 (47%), Positives = 153/229 (66%), Gaps = 1/229 (0%)
 Frame = +2

Query: 2   FRAQKFDKVSVILDVMLSTKCSPDLVFYNVLIDCFAKLRRYDDAIEVFLSLKGMKLNPDA 181
           +RA + D  + +   M ST CSPDLV +NVL+DC  K +RYD A+ V+L+L   ++ PDA
Sbjct: 290 YRAGRHDIATELFASMSSTNCSPDLVLHNVLMDCMTKDKRYDAALGVYLNLHESQMKPDA 349

Query: 182 YTLSSLLFTLCSGRKLRNLPKL-IDGLDVSVDLVACGSLISAFCKAGFPSQAIEVFVKMM 358
           YTLS+L+  L   R +  LP+L +D  D+  DLVAC S+++A  K+GFPSQA++ F+ M+
Sbjct: 350 YTLSTLVRALHLSRNVSLLPRLFLDSADIPYDLVACNSVLNALRKSGFPSQAVQFFINMI 409

Query: 359 DRGFSPDSYSYAGLINGLCISGRIERAVGVYHSILTNTANVDAYVHTAIVAGLVKEKEYR 538
                PDSYSY GL++ LC  GRI+ A+ VYHSI+++  + +AYVH AI+ GLVK+   R
Sbjct: 410 KCDIRPDSYSYVGLLDSLCQLGRIDHAINVYHSIVSSDPDSNAYVHAAILCGLVKKGHNR 469

Query: 539 TAIQLFRNAVLQDYHLDVVSYTVAITGLFRGCRYEEARSLFDQMKHSGV 685
            A+ +   AV Q+Y LD V YTV + GL +    EEA  LFD+MK SG+
Sbjct: 470 MALMILNEAVRQNYALDAVCYTVVLHGLLQAHLIEEACMLFDKMKRSGM 518



 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 49/214 (22%), Positives = 99/214 (46%), Gaps = 20/214 (9%)
 Frame = +2

Query: 29  SVILDVMLSTK------C------SPDLVFYNVLIDCFAKLRRYDDAIEVFLSLKGMKLN 172
           +V+LDV+L T+      C      SP+ + Y +L+    +   +      FL++      
Sbjct: 147 NVVLDVLLRTRHHHSALCFLRDNPSPNYLTYAILLTHLCRSGNWPGVRACFLAMLHQGFL 206

Query: 173 PDAYTLSSLLFTLCSGRKLRNLPKL--------IDGLDVSVDLVACGSLISAFCKAGFPS 328
           P A +L+++ F  C+  KL    +L        + G  ++  +  C  LI+  C+ G   
Sbjct: 207 PSAASLNAV-FACCT--KLAATSELLQLLGFTLVSGYQLTSAMWTC--LIARLCREGKLD 261

Query: 329 QAIEVFVKMMDRGFSPDSYSYAGLINGLCISGRIERAVGVYHSILTNTANVDAYVHTAIV 508
           +AI +  KM+  G  P   +Y  ++  L  +GR + A  ++ S+ +   + D  +H  ++
Sbjct: 262 EAIRMLAKMLASGSPPTVVTYTPIVRALYRAGRHDIATELFASMSSTNCSPDLVLHNVLM 321

Query: 509 AGLVKEKEYRTAIQLFRNAVLQDYHLDVVSYTVA 610
             + K+K Y  A+ ++ N  L +  +   +YT++
Sbjct: 322 DCMTKDKRYDAALGVYLN--LHESQMKPDAYTLS 353


>ref|XP_006365279.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g16830-like isoform X1 [Solanum tuberosum]
           gi|565399483|ref|XP_006365280.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At1g16830-like isoform X2 [Solanum tuberosum]
          Length = 657

 Score =  212 bits (539), Expect = 1e-52
 Identities = 110/228 (48%), Positives = 145/228 (63%)
 Frame = +2

Query: 2   FRAQKFDKVSVILDVMLSTKCSPDLVFYNVLIDCFAKLRRYDDAIEVFLSLKGMKLNPDA 181
           F +Q   K   ILD M S  CSPDLV  NVLIDC +K+ RY+DAI  F  L+  +L PD+
Sbjct: 312 FESQMPSKAFGILDTMESKGCSPDLVLCNVLIDCLSKMGRYEDAINAFFLLREQRLIPDS 371

Query: 182 YTLSSLLFTLCSGRKLRNLPKLIDGLDVSVDLVACGSLISAFCKAGFPSQAIEVFVKMMD 361
           YTL SL+ T+C  ++   LP LI G  +  DLVAC S +S FCKAG+P+ AIE +  M+D
Sbjct: 372 YTLCSLITTVCLSKQFVELPLLITGFKIQPDLVACNSFLSYFCKAGYPAGAIEFYNDMID 431

Query: 362 RGFSPDSYSYAGLINGLCISGRIERAVGVYHSILTNTANVDAYVHTAIVAGLVKEKEYRT 541
           RGF  D Y++AGL+ GLC SGRI  AV VYH ++ +   +D+++ T I+ GL+K  ++  
Sbjct: 432 RGFVADKYTFAGLLTGLCRSGRIGEAVKVYHGLIRSHIGLDSHIITVIINGLIKSGKFHK 491

Query: 542 AIQLFRNAVLQDYHLDVVSYTVAITGLFRGCRYEEARSLFDQMKHSGV 685
           AI L   A      LD VSYT+AI+GL  G    EA +LF QMK  G+
Sbjct: 492 AISLITKAASGKPQLDDVSYTIAISGLLTGGEVGEAYALFRQMKEVGL 539



 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 48/202 (23%), Positives = 91/202 (45%), Gaps = 4/202 (1%)
 Frame = +2

Query: 14  KFDKVSVILDVMLSTKCSPDLVFYNVLIDCFAKLRRYDDAIEVFLSLKGMKLNPDAYTLS 193
           K ++V V L V+  T+  P+ + Y++ +    KL    +  +V + +   +  P+  T  
Sbjct: 177 KIERVEVALRVLKETEI-PNFLSYSIAVCNLCKLNDLVNLQDVLMIMLRKRYYPNEETFF 235

Query: 194 SLLFTLCSGRKLRNLPKLIDGLDVSVDLVAC----GSLISAFCKAGFPSQAIEVFVKMMD 361
            +L   C G  +    +++ G+ + + +  C      LI   CKAG    A  +  KM++
Sbjct: 236 VILNCYCKGGCIAEAKQIL-GVMIVLGVRICERVWSILIDVHCKAGNMDAASHLLKKMVE 294

Query: 362 RGFSPDSYSYAGLINGLCISGRIERAVGVYHSILTNTANVDAYVHTAIVAGLVKEKEYRT 541
            G+SP+  +   LI G   S    +A G+  ++ +   + D  +   ++  L K   Y  
Sbjct: 295 SGYSPNVVTCTSLIKGFFESQMPSKAFGILDTMESKGCSPDLVLCNVLIDCLSKMGRYED 354

Query: 542 AIQLFRNAVLQDYHLDVVSYTV 607
           AI  F   +L++  L   SYT+
Sbjct: 355 AINAF--FLLREQRLIPDSYTL 374


>tpg|DAA46501.1| TPA: hypothetical protein ZEAMMB73_380894 [Zea mays]
          Length = 625

 Score =  211 bits (538), Expect = 1e-52
 Identities = 103/227 (45%), Positives = 156/227 (68%)
 Frame = +2

Query: 5   RAQKFDKVSVILDVMLSTKCSPDLVFYNVLIDCFAKLRRYDDAIEVFLSLKGMKLNPDAY 184
           RA + +K S +L  M+S  C PD+V YNVL+D   K RRY++A+ +++ + G ++ PDAY
Sbjct: 284 RAGRHEKASELLGSMMSASCRPDIVLYNVLMDSMLKERRYNEALNIYMHILGSQIKPDAY 343

Query: 185 TLSSLLFTLCSGRKLRNLPKLIDGLDVSVDLVACGSLISAFCKAGFPSQAIEVFVKMMDR 364
           TLS+L   L   + +  L  LI   D+S+DLVAC S++S+ CK+GFPS+AI+ ++  +D 
Sbjct: 344 TLSTLAQVLQFSQNMGLLHSLILSSDISLDLVACNSVLSSLCKSGFPSEAIQFYIDRIDT 403

Query: 365 GFSPDSYSYAGLINGLCISGRIERAVGVYHSILTNTANVDAYVHTAIVAGLVKEKEYRTA 544
             SPDSY++AGL++ LC  GR+  A+ VYH+I+ +   ++AYVH AI+ GLV++ +   A
Sbjct: 404 CTSPDSYTHAGLLDSLCQLGRVNHAIDVYHNIIASAPELNAYVHAAILRGLVRQGQSLAA 463

Query: 545 IQLFRNAVLQDYHLDVVSYTVAITGLFRGCRYEEARSLFDQMKHSGV 685
           +++ R AV ++Y +D V YTV + GLFR    EEA  LFDQMK+SG+
Sbjct: 464 LRILREAVRKNYAVDSVCYTVVLHGLFRVHLVEEAFRLFDQMKNSGL 510



 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 42/193 (21%), Positives = 89/193 (46%), Gaps = 17/193 (8%)
 Frame = +2

Query: 29  SVILDVMLSTKC------------SPDLVFYNVLIDCFAKLRRYDDAIEVFLSLKGMKLN 172
           +V+LDV L T              +P+ + Y +++    +   +  A   F+ +  +   
Sbjct: 140 NVVLDVQLRTGHLDAARHTLQYYPAPNYLTYAIVLTHLCRAGGWSGARSCFIEMLQLGFV 199

Query: 173 PDAYTLSSLLFTLCSGRKLRNLPKL-----IDGLDVSVDLVACGSLISAFCKAGFPSQAI 337
           P A +L+++         +  L +L     + G +++  +  C  LI+  C+ G   +A 
Sbjct: 200 PSAASLTAVFACCSKAGTMSELLQLFSFALVSGCNLTSAMWTC--LIARLCREGRLEEAC 257

Query: 338 EVFVKMMDRGFSPDSYSYAGLINGLCISGRIERAVGVYHSILTNTANVDAYVHTAIVAGL 517
            +  KM D G SP   +Y  L+ GL  +GR E+A  +  S+++ +   D  ++  ++  +
Sbjct: 258 NMLAKMADSGSSPSVVTYTPLVRGLLRAGRHEKASELLGSMMSASCRPDIVLYNVLMDSM 317

Query: 518 VKEKEYRTAIQLF 556
           +KE+ Y  A+ ++
Sbjct: 318 LKERRYNEALNIY 330


>ref|XP_004158095.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g16830-like [Cucumis sativus]
          Length = 525

 Score =  207 bits (528), Expect = 2e-51
 Identities = 108/226 (47%), Positives = 150/226 (66%)
 Frame = +2

Query: 8   AQKFDKVSVILDVMLSTKCSPDLVFYNVLIDCFAKLRRYDDAIEVFLSLKGMKLNPDAYT 187
           AQ+      +L ++ S   SPDL+ YNVLID  AK  RY+DA+ +FLSL    + PD YT
Sbjct: 223 AQRISDAFDVLSIIESEGPSPDLILYNVLIDSLAKNERYNDALSIFLSLHKRNILPDCYT 282

Query: 188 LSSLLFTLCSGRKLRNLPKLIDGLDVSVDLVACGSLISAFCKAGFPSQAIEVFVKMMDRG 367
            SSLL T+C  ++L  LPKL+DG  V VDLVAC SL+S   KAGF + A+E++  M++ G
Sbjct: 283 FSSLLNTICLSKRLFLLPKLVDGFLVEVDLVACNSLLSYLGKAGFAALALELYNNMVNGG 342

Query: 368 FSPDSYSYAGLINGLCISGRIERAVGVYHSILTNTANVDAYVHTAIVAGLVKEKEYRTAI 547
             PD YS  G++ GLC S RI  AV +Y+ IL N   VDA++HT I+ GL+K  ++ +AI
Sbjct: 343 LMPDKYSVLGVLTGLCESRRIGEAVRLYNGILLNYTGVDAHIHTVIIDGLIKAGKFHSAI 402

Query: 548 QLFRNAVLQDYHLDVVSYTVAITGLFRGCRYEEARSLFDQMKHSGV 685
           ++FR  +L++  LDVVSY+VAI GL    R  EA +L++ MK +G+
Sbjct: 403 RIFRRNLLEENSLDVVSYSVAIRGLLLVGRNTEASNLYNYMKEAGI 448


>ref|XP_004135727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g16830-like [Cucumis sativus]
          Length = 665

 Score =  207 bits (528), Expect = 2e-51
 Identities = 108/226 (47%), Positives = 150/226 (66%)
 Frame = +2

Query: 8   AQKFDKVSVILDVMLSTKCSPDLVFYNVLIDCFAKLRRYDDAIEVFLSLKGMKLNPDAYT 187
           AQ+      +L ++ S   SPDL+ YNVLID  AK  RY+DA+ +FLSL    + PD YT
Sbjct: 315 AQRISDAFDVLSIIESEGPSPDLILYNVLIDSLAKNERYNDALSIFLSLHKRNILPDCYT 374

Query: 188 LSSLLFTLCSGRKLRNLPKLIDGLDVSVDLVACGSLISAFCKAGFPSQAIEVFVKMMDRG 367
            SSLL T+C  ++L  LPKL+DG  V VDLVAC SL+S   KAGF + A+E++  M++ G
Sbjct: 375 FSSLLNTICLSKRLFLLPKLVDGFLVEVDLVACNSLLSYLGKAGFAALALELYNNMVNGG 434

Query: 368 FSPDSYSYAGLINGLCISGRIERAVGVYHSILTNTANVDAYVHTAIVAGLVKEKEYRTAI 547
             PD YS  G++ GLC S RI  AV +Y+ IL N   VDA++HT I+ GL+K  ++ +AI
Sbjct: 435 LMPDKYSVLGVLTGLCESRRIGEAVRLYNGILLNYTGVDAHIHTVIIDGLIKAGKFHSAI 494

Query: 548 QLFRNAVLQDYHLDVVSYTVAITGLFRGCRYEEARSLFDQMKHSGV 685
           ++FR  +L++  LDVVSY+VAI GL    R  EA +L++ MK +G+
Sbjct: 495 RIFRRNLLEENSLDVVSYSVAIRGLLLVGRNTEASNLYNYMKEAGI 540



 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 44/169 (26%), Positives = 79/169 (46%), Gaps = 3/169 (1%)
 Frame = +2

Query: 71  DLVFYNVLIDCFAKLRRYDDAIEVFLSLKGMKLNPDAYTLSSLLFTLCSGRKLRNLPKLI 250
           DLV  N L+    K      A+E++ ++    L PD Y++  +L  LC  R++    +L 
Sbjct: 403 DLVACNSLLSYLGKAGFAALALELYNNMVNGGLMPDKYSVLGVLTGLCESRRIGEAVRLY 462

Query: 251 DGLDVS---VDLVACGSLISAFCKAGFPSQAIEVFVKMMDRGFSPDSYSYAGLINGLCIS 421
           +G+ ++   VD      +I    KAG    AI +F + +    S D  SY+  I GL + 
Sbjct: 463 NGILLNYTGVDAHIHTVIIDGLIKAGKFHSAIRIFRRNLLEENSLDVVSYSVAIRGLLLV 522

Query: 422 GRIERAVGVYHSILTNTANVDAYVHTAIVAGLVKEKEYRTAIQLFRNAV 568
           GR   A  +Y+ +     N + +V   +++   KEK++    Q+ +  +
Sbjct: 523 GRNTEASNLYNYMKEAGINPNGHVCNVMLSTFCKEKKFALVKQMLQEMI 571


>ref|XP_006662641.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g16830-like, partial [Oryza brachyantha]
          Length = 559

 Score =  206 bits (523), Expect = 7e-51
 Identities = 102/228 (44%), Positives = 153/228 (67%)
 Frame = +2

Query: 2   FRAQKFDKVSVILDVMLSTKCSPDLVFYNVLIDCFAKLRRYDDAIEVFLSLKGMKLNPDA 181
           +++ + D  S +   M ST CSPDLV +NVL+DC AK RRYD A+ ++L+L+  ++ PDA
Sbjct: 219 YQSGRHDIASELFTHMSSTNCSPDLVLHNVLMDCMAKERRYDAALGIYLNLRESQIKPDA 278

Query: 182 YTLSSLLFTLCSGRKLRNLPKLIDGLDVSVDLVACGSLISAFCKAGFPSQAIEVFVKMMD 361
           YTLS+++  L     +  LP+L+   D+  DLVAC S+++A CK+GFPSQA++ F+ M+ 
Sbjct: 279 YTLSTVVQVLQLSGNVSLLPRLLLDSDIPYDLVACNSVLNALCKSGFPSQAVQFFINMIK 338

Query: 362 RGFSPDSYSYAGLINGLCISGRIERAVGVYHSILTNTANVDAYVHTAIVAGLVKEKEYRT 541
               PDSYSY GL++ LC  GRI+ AV +Y SI++   + +AY+H AI+ GLVK+ + R 
Sbjct: 339 CDIKPDSYSYVGLLDSLCQLGRIDHAVNLYRSIVSIDPDSNAYIHAAILHGLVKKGQNRM 398

Query: 542 AIQLFRNAVLQDYHLDVVSYTVAITGLFRGCRYEEARSLFDQMKHSGV 685
           A+ +   A+ Q+  LD V YTV + GL +    EEA  LF++MK+SG+
Sbjct: 399 ALMILNEAIRQNCALDAVCYTVVLHGLLQAHMIEEACMLFNKMKYSGM 446



 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 54/214 (25%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
 Frame = +2

Query: 29  SVILDVMLSTK------C------SPDLVFYNVLIDCFAKLRRYDDAIEVFLSLKGMKLN 172
           + +LDV+L T+      C      SP+ + Y +L+    K   +  A   FL++      
Sbjct: 76  NAVLDVLLRTRQHHSALCFLRDNPSPNYLTYAILLTHLCKAENWPGARGCFLAMLHQGFI 135

Query: 173 PDAYTLSSLLFTLCSGRKLRNLPKL--------IDGLDVSVDLVACGSLISAFCKAGFPS 328
           P + +L+++ F  CS  KL  +  L        + G   +  + AC  LI+  C+ G   
Sbjct: 136 PSSASLAAV-FACCS--KLGAMSHLLQLLSFILVSGYQFTSAMWAC--LIARLCREGRLD 190

Query: 329 QAIEVFVKMMDRGFSPDSYSYAGLINGLCISGRIERAVGVYHSILTNTANVDAYVHTAIV 508
           +AI +  KM+  GFSP   +Y  L+  L  SGR + A  ++  + +   + D  +H  ++
Sbjct: 191 EAISMLAKMLGSGFSPTVVTYTPLVRALYQSGRHDIASELFTHMSSTNCSPDLVLHNVLM 250

Query: 509 AGLVKEKEYRTAIQLFRNAVLQDYHLDVVSYTVA 610
             + KE+ Y  A+ ++ N  L++  +   +YT++
Sbjct: 251 DCMAKERRYDAALGIYLN--LRESQIKPDAYTLS 282


>ref|XP_006601682.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g16830-like [Glycine max]
          Length = 270

 Score =  206 bits (523), Expect = 7e-51
 Identities = 102/219 (46%), Positives = 147/219 (67%), Gaps = 1/219 (0%)
 Frame = +2

Query: 35  ILDVMLSTKCSPDLVFYNVLIDCFAKLRRYDDAIEVFLSLKGMKLNPDAYTLSSLLFTLC 214
           + +VMLS+  SPDL+  NVLIDC +K  R  DAI+VFLSL    L PD+YT +SLL T+C
Sbjct: 8   LFNVMLSSGQSPDLILCNVLIDCLSKAGRCQDAIQVFLSLSERNLKPDSYTFASLLSTIC 67

Query: 215 SGRKLRNLPKLI-DGLDVSVDLVACGSLISAFCKAGFPSQAIEVFVKMMDRGFSPDSYSY 391
             +    LPKL+     V  DLV C +L+S+  KA  PS A+  +  M+D GF PD Y++
Sbjct: 68  RSKMFYLLPKLVLVSRHVDADLVFCNALLSSLTKADLPSLAVGFYDHMIDEGFVPDKYTF 127

Query: 392 AGLINGLCISGRIERAVGVYHSILTNTANVDAYVHTAIVAGLVKEKEYRTAIQLFRNAVL 571
           AGL++ LC +GR+++AV VYH ++ +  ++DA++HT I+ GL+K  ++  A+ + R AV+
Sbjct: 128 AGLLSALCCAGRVDKAVNVYHGVVMSYHDIDAHIHTVIIVGLLKTGKFHKAVSVLRFAVM 187

Query: 572 QDYHLDVVSYTVAITGLFRGCRYEEARSLFDQMKHSGVL 688
             Y LD V+YTV I  L RG R +EA +L+DQMK+ G+L
Sbjct: 188 NKYPLDTVAYTVGICALLRGRRTQEACTLYDQMKNDGML 226


>ref|XP_006601680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g16830-like [Glycine max]
          Length = 643

 Score =  204 bits (519), Expect = 2e-50
 Identities = 101/218 (46%), Positives = 146/218 (66%), Gaps = 1/218 (0%)
 Frame = +2

Query: 35  ILDVMLSTKCSPDLVFYNVLIDCFAKLRRYDDAIEVFLSLKGMKLNPDAYTLSSLLFTLC 214
           + +VMLS+  SPDL+  NVLIDC +K  R  DAI+VFLSL    L PD+YT +SLL T+C
Sbjct: 304 LFNVMLSSGQSPDLILCNVLIDCLSKAGRCQDAIQVFLSLSERNLKPDSYTFASLLSTIC 363

Query: 215 SGRKLRNLPKLI-DGLDVSVDLVACGSLISAFCKAGFPSQAIEVFVKMMDRGFSPDSYSY 391
             +    LPKL+     V  DLV C +L+S+  KA  PS A+  +  M+D GF PD Y++
Sbjct: 364 RSKMFYLLPKLVLVSRHVDADLVFCNALLSSLTKADLPSLAVGFYDHMIDEGFVPDKYTF 423

Query: 392 AGLINGLCISGRIERAVGVYHSILTNTANVDAYVHTAIVAGLVKEKEYRTAIQLFRNAVL 571
           AGL++ LC +GR+++AV VYH ++ +  ++DA++HT I+ GL+K  ++  A+ + R AV+
Sbjct: 424 AGLLSALCCAGRVDKAVNVYHGVVMSYHDIDAHIHTVIIVGLLKTGKFHKAVSVLRFAVM 483

Query: 572 QDYHLDVVSYTVAITGLFRGCRYEEARSLFDQMKHSGV 685
             Y LD V+YTV I  L RG R +EA +L+DQMK+ G+
Sbjct: 484 NKYPLDTVAYTVGICALLRGRRTQEACTLYDQMKNDGL 521



 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 44/191 (23%), Positives = 85/191 (44%), Gaps = 3/191 (1%)
 Frame = +2

Query: 26  VSVILDVMLSTKCSPDLVFYNVLIDCFAKLRRYDDAIEVFLSLKGMKLNPDAYTLSSLLF 205
           ++ +L +ML    SP  + + +L++   K+  +  A ++   +  + +N      + L+ 
Sbjct: 196 IARMLRLMLWAGYSPSPLTFQMLLNSLCKINAFPQAYQLLALMTVLGINFSVNIWTILIH 255

Query: 206 TLCSGRKLRNLPKLIDGL---DVSVDLVACGSLISAFCKAGFPSQAIEVFVKMMDRGFSP 376
             C   +LR    L   +     S ++V    L  AF ++  PS A  +F  M+  G SP
Sbjct: 256 NYCKFGRLRLANNLFHNMLQTGCSPNVVTYTILFKAFMQSNMPSPAFRLFNVMLSSGQSP 315

Query: 377 DSYSYAGLINGLCISGRIERAVGVYHSILTNTANVDAYVHTAIVAGLVKEKEYRTAIQLF 556
           D      LI+ L  +GR + A+ V+ S+       D+Y   ++++ + + K +     L 
Sbjct: 316 DLILCNVLIDCLSKAGRCQDAIQVFLSLSERNLKPDSYTFASLLSTICRSKMF----YLL 371

Query: 557 RNAVLQDYHLD 589
              VL   H+D
Sbjct: 372 PKLVLVSRHVD 382