BLASTX nr result

ID: Zingiber23_contig00036919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00036919
         (663 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006303911.1| hypothetical protein CARUB_v10008388mg [Caps...    60   8e-07
ref|XP_006418204.1| hypothetical protein EUTSA_v10006864mg [Eutr...    59   1e-06
ref|NP_171874.3| protein TPX2 [Arabidopsis thaliana] gi|33218949...    57   6e-06
ref|NP_001184902.1| protein TPX2 [Arabidopsis thaliana] gi|44258...    57   6e-06
ref|NP_973754.2| protein TPX2 [Arabidopsis thaliana] gi|62320544...    57   6e-06

>ref|XP_006303911.1| hypothetical protein CARUB_v10008388mg [Capsella rubella]
           gi|482572622|gb|EOA36809.1| hypothetical protein
           CARUB_v10008388mg [Capsella rubella]
          Length = 757

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 46/134 (34%), Positives = 67/134 (50%), Gaps = 4/134 (2%)
 Frame = +3

Query: 267 DASPVAEAPEVCNSKAHSSEKVAESSIVKNNDSVESCTPRIQKMPVKEVAPGSSKNL--- 437
           D+S VAE     N+K   +       I    +   +CTP   K P++    G S +L   
Sbjct: 112 DSSKVAEV----NNKTADASNATTEQIEDKENIPPACTP---KPPLQFSQGGKSMDLKKQ 164

Query: 438 -TARKIAFFIQQTCASNPKTKPLTHSSKVNNVKNSTKFSSGLVANNFLANEVSEENQAVK 614
            TARKIA  ++   A  PK +     +K ++ K+  + +S  V N      + +ENQA+K
Sbjct: 165 QTARKIASLLKNPSALRPKNQSQLSQAKGSHQKSVKRETS--VRNMVSTTNLIQENQAIK 222

Query: 615 RQKLDYGKARQIHN 656
           RQKLD GK+RQI N
Sbjct: 223 RQKLDDGKSRQILN 236


>ref|XP_006418204.1| hypothetical protein EUTSA_v10006864mg [Eutrema salsugineum]
           gi|557095975|gb|ESQ36557.1| hypothetical protein
           EUTSA_v10006864mg [Eutrema salsugineum]
          Length = 776

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 17/149 (11%)
 Frame = +3

Query: 261 PLDASPVAEAPEVCNSKAHSSEKVAESSIVKNNDS-------------VESCTPRIQKMP 401
           P++AS +          +H++ K  ++SI+K+  +              E+CTP   K P
Sbjct: 120 PIEASKI--------KPSHNNSKDVDASILKDKTTEQIENKENIPPPNTEACTP---KPP 168

Query: 402 VKEVAPGSSKNL----TARKIAFFIQQTCASNPKTKPLTHSSKVNNVKNSTKFSSGLVAN 569
           ++    G S +L    TARKIA  ++   A  PK +  +  SK  + K+  + +S  V N
Sbjct: 169 LQLSQGGKSMDLKKQQTARKIASLLRNPSALRPKHQSQSSQSKGTHQKSVKRETS--VKN 226

Query: 570 NFLANEVSEENQAVKRQKLDYGKARQIHN 656
                 + +ENQA+KRQKLD GK+RQI N
Sbjct: 227 IAATTNLIQENQAIKRQKLDDGKSRQILN 255


>ref|NP_171874.3| protein TPX2 [Arabidopsis thaliana] gi|332189491|gb|AEE27612.1|
           targeting protein for XKLP2 [Arabidopsis thaliana]
          Length = 687

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 47/154 (30%), Positives = 71/154 (46%), Gaps = 21/154 (13%)
 Frame = +3

Query: 258 VPLDASPV-AEAPEVCNSKAHSSE--KVAESSIVKNNDSVESCTPRIQKMPVKE-VAPGS 425
           V L + P  A+  EV  SKA + +  +++      NN +V++  P  + +  KE +AP  
Sbjct: 97  VSLQSQPSQAKKAEVAPSKASTVKPSRISSKDAEVNNKTVDASDPTTEPIEDKENIAPAC 156

Query: 426 S-----------------KNLTARKIAFFIQQTCASNPKTKPLTHSSKVNNVKNSTKFSS 554
           +                 K  TARKIA  ++      PK +     S   +VK  T  ++
Sbjct: 157 TPKPPMQFSLGAKSVDLKKQQTARKIASLLKNPSTLRPKNQSQAKGSHQKSVKGETNLNN 216

Query: 555 GLVANNFLANEVSEENQAVKRQKLDYGKARQIHN 656
                N +     +ENQA+KRQKLD GK+RQI N
Sbjct: 217 IASTTNLI-----QENQAIKRQKLDDGKSRQILN 245


>ref|NP_001184902.1| protein TPX2 [Arabidopsis thaliana]
           gi|442580990|sp|F4I2H7.1|TPX2_ARATH RecName:
           Full=Protein TPX2; Short=AtTPX2; AltName: Full=Targeting
           protein for XKLP2 gi|332189492|gb|AEE27613.1| targeting
           protein for XKLP2 [Arabidopsis thaliana]
          Length = 790

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 47/154 (30%), Positives = 71/154 (46%), Gaps = 21/154 (13%)
 Frame = +3

Query: 258 VPLDASPV-AEAPEVCNSKAHSSE--KVAESSIVKNNDSVESCTPRIQKMPVKE-VAPGS 425
           V L + P  A+  EV  SKA + +  +++      NN +V++  P  + +  KE +AP  
Sbjct: 97  VSLQSQPSQAKKAEVAPSKASTVKPSRISSKDAEVNNKTVDASDPTTEPIEDKENIAPAC 156

Query: 426 S-----------------KNLTARKIAFFIQQTCASNPKTKPLTHSSKVNNVKNSTKFSS 554
           +                 K  TARKIA  ++      PK +     S   +VK  T  ++
Sbjct: 157 TPKPPMQFSLGAKSVDLKKQQTARKIASLLKNPSTLRPKNQSQAKGSHQKSVKGETNLNN 216

Query: 555 GLVANNFLANEVSEENQAVKRQKLDYGKARQIHN 656
                N +     +ENQA+KRQKLD GK+RQI N
Sbjct: 217 IASTTNLI-----QENQAIKRQKLDDGKSRQILN 245


>ref|NP_973754.2| protein TPX2 [Arabidopsis thaliana] gi|62320544|dbj|BAD95139.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332189490|gb|AEE27611.1| targeting protein for XKLP2
           [Arabidopsis thaliana]
          Length = 758

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 47/154 (30%), Positives = 71/154 (46%), Gaps = 21/154 (13%)
 Frame = +3

Query: 258 VPLDASPV-AEAPEVCNSKAHSSE--KVAESSIVKNNDSVESCTPRIQKMPVKE-VAPGS 425
           V L + P  A+  EV  SKA + +  +++      NN +V++  P  + +  KE +AP  
Sbjct: 97  VSLQSQPSQAKKAEVAPSKASTVKPSRISSKDAEVNNKTVDASDPTTEPIEDKENIAPAC 156

Query: 426 S-----------------KNLTARKIAFFIQQTCASNPKTKPLTHSSKVNNVKNSTKFSS 554
           +                 K  TARKIA  ++      PK +     S   +VK  T  ++
Sbjct: 157 TPKPPMQFSLGAKSVDLKKQQTARKIASLLKNPSTLRPKNQSQAKGSHQKSVKGETNLNN 216

Query: 555 GLVANNFLANEVSEENQAVKRQKLDYGKARQIHN 656
                N +     +ENQA+KRQKLD GK+RQI N
Sbjct: 217 IASTTNLI-----QENQAIKRQKLDDGKSRQILN 245


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