BLASTX nr result

ID: Zingiber23_contig00036683 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00036683
         (330 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134414.1| PREDICTED: RING-H2 finger protein ATL16-like...    55   7e-06

>ref|XP_004134414.1| PREDICTED: RING-H2 finger protein ATL16-like [Cucumis sativus]
           gi|449525934|ref|XP_004169971.1| PREDICTED: LOW QUALITY
           PROTEIN: RING-H2 finger protein ATL16-like [Cucumis
           sativus]
          Length = 322

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 8/83 (9%)
 Frame = -1

Query: 228 EAGEQRKAAELFASRGDEWIGAGKKDEALRAQPMRRSLSMDSSTDARLHVAL-------R 70
           E G++ +  +   S GDEWI   +KDE    QP+RRS+SMDSS + +++VA+       R
Sbjct: 220 EQGKKWQKLQKVTSLGDEWIDTREKDEQFCIQPIRRSVSMDSSAERQMYVAVQAALQQSR 279

Query: 69  QGSRAENDGAG-GGILRRSLFLF 4
            G+     G G  G  RRSLF F
Sbjct: 280 HGNEVSPGGDGCNGRGRRSLFSF 302


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