BLASTX nr result

ID: Zingiber23_contig00036679 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00036679
         (305 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006853118.1| hypothetical protein AMTR_s00038p00140720 [A...    69   8e-10
ref|XP_006853110.1| hypothetical protein AMTR_s00038p00132760 [A...    61   2e-07
ref|XP_004514126.1| PREDICTED: pentatricopeptide repeat-containi...    58   1e-06
ref|XP_002309609.2| pentatricopeptide repeat-containing family p...    57   3e-06
gb|ESW08977.1| hypothetical protein PHAVU_009G090400g [Phaseolus...    56   6e-06

>ref|XP_006853118.1| hypothetical protein AMTR_s00038p00140720 [Amborella trichopoda]
           gi|548856757|gb|ERN14585.1| hypothetical protein
           AMTR_s00038p00140720 [Amborella trichopoda]
          Length = 855

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 37/101 (36%), Positives = 61/101 (60%)
 Frame = -2

Query: 304 SNQPKPNDALKFFKRSRIQDGMGGDLRKVDSLCIMLHILASAGKVASAQNLMKNSIQSGS 125
           SNQ     AL++F+ +  Q G    +R ++ LC++LHILA    + +A+NL+K+S+ + S
Sbjct: 97  SNQTDSKAALRYFRWAERQRGF---IRGLEPLCVVLHILARNKDLPAARNLIKHSLSANS 153

Query: 124 APRPSILVHRLIEMASKCGSNSSSFDHLLTFYTRTGKVEEA 2
           +   S  + RL+E + +C S+   FD +L  YTR G V E+
Sbjct: 154 SIGASAFIDRLLETSERCNSHPRVFDLVLNGYTRYGSVTES 194


>ref|XP_006853110.1| hypothetical protein AMTR_s00038p00132760 [Amborella trichopoda]
           gi|548856749|gb|ERN14577.1| hypothetical protein
           AMTR_s00038p00132760 [Amborella trichopoda]
          Length = 757

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 37/101 (36%), Positives = 52/101 (51%)
 Frame = -2

Query: 304 SNQPKPNDALKFFKRSRIQDGMGGDLRKVDSLCIMLHILASAGKVASAQNLMKNSIQSGS 125
           +NQ  P  +LK+F   R  D   G LR ++ LCI LHILA    + S + L+K      S
Sbjct: 105 NNQSHPKASLKYF---RWADAQRGYLRGLEPLCITLHILARNKNLPSVRKLIKFFFSKKS 161

Query: 124 APRPSILVHRLIEMASKCGSNSSSFDHLLTFYTRTGKVEEA 2
            P     +  L+E + +C S+   FD +L  YTR G V E+
Sbjct: 162 IPGAPAFIDCLMETSKRCESHPQVFDLVLNGYTRHGSVPES 202


>ref|XP_004514126.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cicer arietinum]
          Length = 850

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 35/104 (33%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
 Frame = -2

Query: 304 SNQPKPNDALKFFKRSRIQDGMGGDLRKVDSLCIMLHILASAGKV-ASAQNLMKNSIQSG 128
           +++  P  ALKFFK    + G    ++ VD   ++L IL+S  +  +S +NL+ N +   
Sbjct: 85  THKSNPKSALKFFKGVERKRGF---VKTVDVFSLLLQILSSTPQTHSSLRNLLNNYVFGD 141

Query: 127 SAPRPSILVHRLIEMASKCG--SNSSSFDHLLTFYTRTGKVEEA 2
           S+P P +LV  L+E + + G  S+S  F++LL  Y R  K+ +A
Sbjct: 142 SSPSPKVLVEHLLECSGRYGFESDSRVFNYLLNSYVRANKIVDA 185


>ref|XP_002309609.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550337148|gb|EEE93132.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 841

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 34/104 (32%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
 Frame = -2

Query: 304 SNQPKPNDALKFFKRSRIQDGMGGDLRKVDSLCIMLHILA-SAGKVASAQNLMKNSIQSG 128
           ++Q  P  AL +F  +  + G+   ++ VD+LC++LHIL  S      A+NL+       
Sbjct: 73  NHQNDPQSALSYFTWASQKRGL---IKSVDALCVLLHILTKSTETCGKARNLLNRFASDD 129

Query: 127 SAPRPSILVHRLIEMASKCG--SNSSSFDHLLTFYTRTGKVEEA 2
             P PS++V RLIE + +    S+S  F++LL  Y +T ++ +A
Sbjct: 130 WGPVPSVVVSRLIESSRRLDFESDSRVFNYLLNSYVKTKRINDA 173


>gb|ESW08977.1| hypothetical protein PHAVU_009G090400g [Phaseolus vulgaris]
          Length = 741

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
 Frame = -2

Query: 289 PNDALKFFKRSRIQDGMGGDLRKVDSLCIMLHILASAGKV-ASAQNLMKNSIQSGSAPRP 113
           P  AL FFK+   + G    ++ VD LC++L ILAS+      A+ L+ N +   SAP  
Sbjct: 76  PISALMFFKQVERKRGF---VKTVDILCLLLQILASSPDTHGDAKYLLNNYVFGDSAPCA 132

Query: 112 SILVHRLIEMASKCG---SNSSSFDHLLTFYTRTGKVEEA 2
            +LV  L+E A + G   S+S  F++LL  Y R  K+ +A
Sbjct: 133 KVLVELLVECAERYGFELSDSRVFNYLLNSYVRANKITDA 172


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