BLASTX nr result
ID: Zingiber23_contig00036621
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00036621
(272 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMT02912.1| RNA polymerase-associated RTF1-like protein [Aegi... 103 3e-20
gb|EMS56445.1| RNA polymerase-associated protein RTF1-like prote... 103 3e-20
dbj|BAJ96429.1| predicted protein [Hordeum vulgare subsp. vulgare] 103 3e-20
ref|XP_006664607.1| PREDICTED: RNA polymerase-associated protein... 102 5e-20
gb|EEC69429.1| hypothetical protein OsI_38596 [Oryza sativa Indi... 98 1e-18
gb|EAZ20740.1| hypothetical protein OsJ_36364 [Oryza sativa Japo... 98 1e-18
ref|NP_001066936.1| Os12g0535900 [Oryza sativa Japonica Group] g... 98 1e-18
ref|XP_004962850.1| PREDICTED: RNA polymerase-associated protein... 96 5e-18
ref|XP_003575794.1| PREDICTED: RNA polymerase-associated protein... 89 6e-16
gb|ABB55288.1| sucrose transporter [Asparagus officinalis] 86 5e-15
ref|NP_001168711.1| uncharacterized protein LOC100382503 [Zea ma... 85 9e-15
ref|NP_001145747.1| hypothetical protein [Zea mays] gi|219884293... 84 3e-14
ref|XP_002442249.1| hypothetical protein SORBIDRAFT_08g017010 [S... 79 8e-13
gb|ABA98830.1| Plus-3 domain containing protein, expressed [Oryz... 76 5e-12
gb|EXB82802.1| RNA polymerase-associated protein RTF1-like prote... 65 1e-08
ref|XP_004304724.1| PREDICTED: RNA polymerase-associated protein... 64 2e-08
ref|XP_004293522.1| PREDICTED: RNA polymerase-associated protein... 64 2e-08
gb|EMJ18830.1| hypothetical protein PRUPE_ppa002666mg [Prunus pe... 63 5e-08
gb|ESW31293.1| hypothetical protein PHAVU_002G226300g [Phaseolus... 62 6e-08
ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein... 62 8e-08
>gb|EMT02912.1| RNA polymerase-associated RTF1-like protein [Aegilops tauschii]
Length = 661
Score = 103 bits (256), Expect = 3e-20
Identities = 56/90 (62%), Positives = 65/90 (72%)
Frame = -1
Query: 272 SDLYKDDADKEELGKMSELDREMILAERSTKIDDYKLKKMARASSSKMEXXXXXXXXXXX 93
SDLYKD+ DKE+L M+EL REMILAERST+IDDYKLKK+ARASSSK +
Sbjct: 119 SDLYKDEDDKEQLENMTELQREMILAERSTRIDDYKLKKLARASSSKTDKARKDSPPPPP 178
Query: 92 XXXXXXXRNDKTAAKSALNELRAKRMRQQD 3
R D++A KSAL+ELRAKRMRQQD
Sbjct: 179 SRLRASARTDRSATKSALDELRAKRMRQQD 208
>gb|EMS56445.1| RNA polymerase-associated protein RTF1-like protein [Triticum
urartu]
Length = 681
Score = 103 bits (256), Expect = 3e-20
Identities = 56/90 (62%), Positives = 65/90 (72%)
Frame = -1
Query: 272 SDLYKDDADKEELGKMSELDREMILAERSTKIDDYKLKKMARASSSKMEXXXXXXXXXXX 93
SDLYKD+ DKE+L M+EL REMILAERST+IDDYKLKK+ARASSSK +
Sbjct: 140 SDLYKDEDDKEQLENMTELQREMILAERSTRIDDYKLKKLARASSSKTDKARKDSPPPPP 199
Query: 92 XXXXXXXRNDKTAAKSALNELRAKRMRQQD 3
R D++A KSAL+ELRAKRMRQQD
Sbjct: 200 SRLRASARTDRSATKSALDELRAKRMRQQD 229
>dbj|BAJ96429.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 661
Score = 103 bits (256), Expect = 3e-20
Identities = 56/90 (62%), Positives = 65/90 (72%)
Frame = -1
Query: 272 SDLYKDDADKEELGKMSELDREMILAERSTKIDDYKLKKMARASSSKMEXXXXXXXXXXX 93
SDLYKD+ DKE+L M+EL REMILAERST+IDDYKLKK+ARASSSK +
Sbjct: 119 SDLYKDEDDKEQLENMTELQREMILAERSTRIDDYKLKKLARASSSKTDKARKDSPPPPP 178
Query: 92 XXXXXXXRNDKTAAKSALNELRAKRMRQQD 3
R D++A KSAL+ELRAKRMRQQD
Sbjct: 179 SRLRASARTDRSATKSALDELRAKRMRQQD 208
>ref|XP_006664607.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Oryza
brachyantha]
Length = 645
Score = 102 bits (254), Expect = 5e-20
Identities = 58/91 (63%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
Frame = -1
Query: 272 SDLYKDDADKEELGKMSELDREMILAERSTKIDDYKLKKMARASSSKME-XXXXXXXXXX 96
SDLYKD+ DKE+L K+SELDREMILAERS +IDDYKLK++ARASSSK E
Sbjct: 105 SDLYKDEEDKEQLEKLSELDREMILAERSARIDDYKLKQLARASSSKTEKSRRDSSPPPP 164
Query: 95 XXXXXXXXRNDKTAAKSALNELRAKRMRQQD 3
R D++AAKSAL+ELRAKRMRQQD
Sbjct: 165 LSRARSSTRTDRSAAKSALDELRAKRMRQQD 195
>gb|EEC69429.1| hypothetical protein OsI_38596 [Oryza sativa Indica Group]
Length = 780
Score = 97.8 bits (242), Expect = 1e-18
Identities = 55/93 (59%), Positives = 65/93 (69%), Gaps = 3/93 (3%)
Frame = -1
Query: 272 SDLYKDDADKEELGKMSELDREMILAERSTKIDDYKLKKMARASSSKMEXXXXXXXXXXX 93
SDLYKD+ DKE+L KMSELDREMILAER +IDDYKLK++ARASSS +
Sbjct: 244 SDLYKDEDDKEQLEKMSELDREMILAERGARIDDYKLKQLARASSSSSKADKSRRDSSPP 303
Query: 92 XXXXXXXRN---DKTAAKSALNELRAKRMRQQD 3
+ D++AAKSAL+ELRAKRMRQQD
Sbjct: 304 PPPSRARSSARTDRSAAKSALDELRAKRMRQQD 336
>gb|EAZ20740.1| hypothetical protein OsJ_36364 [Oryza sativa Japonica Group]
Length = 653
Score = 97.8 bits (242), Expect = 1e-18
Identities = 55/93 (59%), Positives = 65/93 (69%), Gaps = 3/93 (3%)
Frame = -1
Query: 272 SDLYKDDADKEELGKMSELDREMILAERSTKIDDYKLKKMARASSSKMEXXXXXXXXXXX 93
SDLYKD+ DKE+L KMSELDREMILAER +IDDYKLK++ARASSS +
Sbjct: 117 SDLYKDEDDKEQLEKMSELDREMILAERGARIDDYKLKQLARASSSSSKADKSRRDSSPP 176
Query: 92 XXXXXXXRN---DKTAAKSALNELRAKRMRQQD 3
+ D++AAKSAL+ELRAKRMRQQD
Sbjct: 177 PPPSRARSSARTDRSAAKSALDELRAKRMRQQD 209
>ref|NP_001066936.1| Os12g0535900 [Oryza sativa Japonica Group]
gi|113649443|dbj|BAF29955.1| Os12g0535900, partial
[Oryza sativa Japonica Group]
Length = 599
Score = 97.8 bits (242), Expect = 1e-18
Identities = 55/93 (59%), Positives = 65/93 (69%), Gaps = 3/93 (3%)
Frame = -1
Query: 272 SDLYKDDADKEELGKMSELDREMILAERSTKIDDYKLKKMARASSSKMEXXXXXXXXXXX 93
SDLYKD+ DKE+L KMSELDREMILAER +IDDYKLK++ARASSS +
Sbjct: 63 SDLYKDEDDKEQLEKMSELDREMILAERGARIDDYKLKQLARASSSSSKADKSRRDSSPP 122
Query: 92 XXXXXXXRN---DKTAAKSALNELRAKRMRQQD 3
+ D++AAKSAL+ELRAKRMRQQD
Sbjct: 123 PPPSRARSSARTDRSAAKSALDELRAKRMRQQD 155
>ref|XP_004962850.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Setaria
italica]
Length = 650
Score = 95.9 bits (237), Expect = 5e-18
Identities = 55/92 (59%), Positives = 64/92 (69%), Gaps = 2/92 (2%)
Frame = -1
Query: 272 SDLYKDDADKEELGKMSELDREMILAERSTKIDDYKLKKMARASSSKMEXXXXXXXXXXX 93
SDLYKD+ DKE+L KMSELDRE+ILAERS++IDDYKLK+MAR+ + K
Sbjct: 109 SDLYKDEEDKEKLEKMSELDRELILAERSSRIDDYKLKQMARSKTGKAGARKDSSPPPPP 168
Query: 92 XXXXXXXRNDK--TAAKSALNELRAKRMRQQD 3
R DK +A KSALNELRAKRMRQQD
Sbjct: 169 SRMRSSTRADKSGSATKSALNELRAKRMRQQD 200
>ref|XP_003575794.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog
[Brachypodium distachyon]
Length = 658
Score = 89.0 bits (219), Expect = 6e-16
Identities = 50/91 (54%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
Frame = -1
Query: 272 SDLYKDDADKEELGKMSELDREMILAERSTKIDDYKL-KKMARASSSKMEXXXXXXXXXX 96
SDLYKD+ DKE+L M+EL REMILAERST+ID+YKL KK+AR +++
Sbjct: 115 SDLYKDEDDKEQLENMTELQREMILAERSTRIDEYKLKKKLARTATTSKTEARKDSPPPP 174
Query: 95 XXXXXXXXRNDKTAAKSALNELRAKRMRQQD 3
R D++A KSAL+ELRAKRMRQQD
Sbjct: 175 LSRSRSSTRTDRSATKSALDELRAKRMRQQD 205
>gb|ABB55288.1| sucrose transporter [Asparagus officinalis]
Length = 793
Score = 85.9 bits (211), Expect = 5e-15
Identities = 51/85 (60%), Positives = 55/85 (64%)
Frame = -1
Query: 272 SDLYKDDADKEELGKMSELDREMILAERSTKIDDYKLKKMARASSSKMEXXXXXXXXXXX 93
SDLYKD+ DKEEL KMSELDREMILAERSTKIDDY LKK AR +SSK+E
Sbjct: 403 SDLYKDEEDKEELEKMSELDREMILAERSTKIDDYMLKKKARETSSKVEMKTRKESPPPL 462
Query: 92 XXXXXXXRNDKTAAKSALNELRAKR 18
+ K ALNELRAKR
Sbjct: 463 RGRPSLRSD-----KPALNELRAKR 482
>ref|NP_001168711.1| uncharacterized protein LOC100382503 [Zea mays]
gi|223950353|gb|ACN29260.1| unknown [Zea mays]
gi|413916604|gb|AFW56536.1| plus-3 domain-containing
protein [Zea mays]
Length = 650
Score = 85.1 bits (209), Expect = 9e-15
Identities = 52/95 (54%), Positives = 61/95 (64%), Gaps = 6/95 (6%)
Frame = -1
Query: 272 SDLYKDDADKEELGKMSELDREMILAERSTKIDDYKLKKMARASSSKMEXXXXXXXXXXX 93
SDLYKD+ DKE L MSEL RE+ILAER T++DDYKLK+ ARASSSK +
Sbjct: 107 SDLYKDEDDKERLENMSELQRELILAERGTRLDDYKLKQRARASSSKTDKVGAPKDSSPP 166
Query: 92 XXXXXXXRNDKT-----AAKSALNELRAK-RMRQQ 6
+ +T AAKSAL+ELRAK RMRQQ
Sbjct: 167 PPPSRMRSSTRTDKSGSAAKSALDELRAKQRMRQQ 201
>ref|NP_001145747.1| hypothetical protein [Zea mays] gi|219884293|gb|ACL52521.1| unknown
[Zea mays] gi|414878213|tpg|DAA55344.1| TPA:
hypothetical protein ZEAMMB73_654453 [Zea mays]
Length = 647
Score = 83.6 bits (205), Expect = 3e-14
Identities = 51/95 (53%), Positives = 61/95 (64%), Gaps = 6/95 (6%)
Frame = -1
Query: 272 SDLYKDDADKEELGKMSELDREMILAERSTKIDDYKLKKMARASSSKMEXXXXXXXXXXX 93
SDLYKD+ DKE L MSEL REMILA+R T++DDYKLK+ ARASSSK +
Sbjct: 104 SDLYKDEDDKERLENMSELQREMILADRGTRLDDYKLKQRARASSSKTDKVGARKDSSPP 163
Query: 92 XXXXXXXRNDK-----TAAKSALNELRAK-RMRQQ 6
+ + +AAKSAL+ELRAK RMRQQ
Sbjct: 164 PPPSRMRSSTRADKSGSAAKSALDELRAKQRMRQQ 198
>ref|XP_002442249.1| hypothetical protein SORBIDRAFT_08g017010 [Sorghum bicolor]
gi|241942942|gb|EES16087.1| hypothetical protein
SORBIDRAFT_08g017010 [Sorghum bicolor]
Length = 656
Score = 78.6 bits (192), Expect = 8e-13
Identities = 50/95 (52%), Positives = 58/95 (61%), Gaps = 6/95 (6%)
Frame = -1
Query: 272 SDLYKDDADKEELGKMSELDREMILAERSTKIDDYKLKKMARASSSKMEXXXXXXXXXXX 93
SDLYKD+ DKE L MSEL REMILA+R T+ DYKLK+ ARAS SK +
Sbjct: 111 SDLYKDEDDKERLENMSELQREMILADRGTRAADYKLKQRARASLSKTDKLGARKDSSPP 170
Query: 92 XXXXXXXRNDKT-----AAKSALNELRAKR-MRQQ 6
+ +T AAKSAL+ELRAKR MRQQ
Sbjct: 171 PPPSRMRSSTRTDKSGSAAKSALDELRAKRTMRQQ 205
>gb|ABA98830.1| Plus-3 domain containing protein, expressed [Oryza sativa Japonica
Group] gi|77556035|gb|ABA98831.1| Plus-3 domain
containing protein, expressed [Oryza sativa Japonica
Group] gi|215697432|dbj|BAG91426.1| unnamed protein
product [Oryza sativa Japonica Group]
Length = 522
Score = 75.9 bits (185), Expect = 5e-12
Identities = 44/78 (56%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Frame = -1
Query: 227 MSELDREMILAERSTKIDDYKLKKMARASSSKMEXXXXXXXXXXXXXXXXXXRN---DKT 57
MSELDREMILAER +IDDYKLK++ARASSS + + D++
Sbjct: 1 MSELDREMILAERGARIDDYKLKQLARASSSSSKADKSRRDSSPPPPPSRARSSARTDRS 60
Query: 56 AAKSALNELRAKRMRQQD 3
AAKSAL+ELRAKRMRQQD
Sbjct: 61 AAKSALDELRAKRMRQQD 78
>gb|EXB82802.1| RNA polymerase-associated protein RTF1-like protein [Morus
notabilis]
Length = 658
Score = 64.7 bits (156), Expect = 1e-08
Identities = 40/94 (42%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Frame = -1
Query: 272 SDLYKDDADKEELGKMSELDREMILAERSTKIDDYKLKKMARA---SSSKMEXXXXXXXX 102
SDLYKDD D+ +L +M+EL REMIL +R++K +D LK+ R + K
Sbjct: 103 SDLYKDDDDRRKLAEMTELQREMILLDRASKKEDKNLKEKLRPKWDNKGKATQSRKETPL 162
Query: 101 XXXXXXXXXXRNDKTAAK-SALNELRAKRMRQQD 3
D+ AAK ALNELRAKR++QQD
Sbjct: 163 PSSRVRSSARSADRAAAKDDALNELRAKRLKQQD 196
>ref|XP_004304724.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Fragaria
vesca subsp. vesca]
Length = 619
Score = 63.9 bits (154), Expect = 2e-08
Identities = 40/94 (42%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Frame = -1
Query: 272 SDLYKDDADKEELGKMSELDREMILAERSTKIDDYKLKKMARASSSK---MEXXXXXXXX 102
SDLYKD+ D+ +L +MSEL RE+IL++R+ K DD LK+ R K +
Sbjct: 105 SDLYKDEDDRRKLAEMSELQRELILSDRAQKKDDKSLKEKFRPKWDKGKATQSRKVTPPL 164
Query: 101 XXXXXXXXXXRNDKTAAK-SALNELRAKRMRQQD 3
D+ AAK ALNELRAKR++QQD
Sbjct: 165 PSSRVRSSARSADRAAAKDDALNELRAKRLKQQD 198
>ref|XP_004293522.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Fragaria
vesca subsp. vesca]
Length = 657
Score = 63.9 bits (154), Expect = 2e-08
Identities = 40/94 (42%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Frame = -1
Query: 272 SDLYKDDADKEELGKMSELDREMILAERSTKIDDYKLKKMARASSSK---MEXXXXXXXX 102
SDLYKD+ D+ +L +MSEL RE+IL++R+ K DD LK+ R K +
Sbjct: 105 SDLYKDENDRRKLAEMSELQRELILSDRAQKKDDKSLKEKFRPKWDKGKATQSRKVTPPL 164
Query: 101 XXXXXXXXXXRNDKTAAK-SALNELRAKRMRQQD 3
D+ AAK ALNELRAKR++QQD
Sbjct: 165 PSSRVRSSARSADRAAAKDDALNELRAKRLKQQD 198
>gb|EMJ18830.1| hypothetical protein PRUPE_ppa002666mg [Prunus persica]
Length = 646
Score = 62.8 bits (151), Expect = 5e-08
Identities = 39/91 (42%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Frame = -1
Query: 272 SDLYKDDADKEELGKMSELDREMILAERSTKIDDYKLKKMARASSSKMEXXXXXXXXXXX 93
SDLYKD+ D+ +L +MSEL RE+IL++R+ K DD LK+ K
Sbjct: 105 SDLYKDEDDRRKLAEMSELQRELILSDRAQKKDDKSLKE-------KFRPKKETPPLPSS 157
Query: 92 XXXXXXXRNDKTAAK-SALNELRAKRMRQQD 3
D+ AAK ALNELRAKR++QQD
Sbjct: 158 RVRSSARSADRAAAKDDALNELRAKRLKQQD 188
>gb|ESW31293.1| hypothetical protein PHAVU_002G226300g [Phaseolus vulgaris]
Length = 654
Score = 62.4 bits (150), Expect = 6e-08
Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Frame = -1
Query: 269 DLYKDDADKEELGKMSELDREMILAERSTKIDDYKL--KKMARASSSKMEXXXXXXXXXX 96
DLYKD+ D+ +L +M+EL REMIL++R+TK DD L K ++ K+
Sbjct: 107 DLYKDEDDRRKLSEMTELQREMILSDRATKKDDKNLLGKIASKREKGKVSVPRKQSPPMS 166
Query: 95 XXXXXXXXRN-DKTAAKSALNELRAKRMRQQD 3
R+ D++A ALNELRAKR++QQD
Sbjct: 167 SSRMRASARSADRSAKNDALNELRAKRLKQQD 198
>ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform
X1 [Glycine max] gi|571466984|ref|XP_006583809.1|
PREDICTED: RNA polymerase-associated protein RTF1
homolog isoform X2 [Glycine max]
Length = 656
Score = 62.0 bits (149), Expect = 8e-08
Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Frame = -1
Query: 269 DLYKDDADKEELGKMSELDREMILAERSTKIDDYKL--KKMARASSSKMEXXXXXXXXXX 96
DLYKD+ D+ +L +M+EL REMIL++R+TK DD L K ++ K+
Sbjct: 106 DLYKDEDDRRKLSEMTELQREMILSDRATKKDDKNLLGKIASKREKGKVAVPRKQSPPMS 165
Query: 95 XXXXXXXXRN-DKTAAKSALNELRAKRMRQQD 3
R+ D++A ALNELRAKR++QQD
Sbjct: 166 SSRMRASARSADRSAKNDALNELRAKRLKQQD 197