BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00036551
         (1506 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ43360.1| hypothetical protein OsJ_27960 [Oryza sativa Japo...   712   0.0  
ref|NP_001062265.1| Os08g0520100 [Oryza sativa Japonica Group] g...   712   0.0  
ref|XP_003572398.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   701   0.0  
ref|XP_004974856.1| PREDICTED: RNA pseudouridine synthase 3, mit...   694   0.0  
gb|AFW61502.1| hypothetical protein ZEAMMB73_778378 [Zea mays]        691   0.0  
ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   648   0.0  
emb|CBI18448.3| unnamed protein product [Vitis vinifera]              639   0.0  
ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [...   634   e-179
gb|EOY26277.1| Pseudouridine synthase family protein [Theobroma ...   630   e-178
gb|ESW32964.1| hypothetical protein PHAVU_001G032500g [Phaseolus...   629   e-177
ref|XP_006601250.1| PREDICTED: RNA pseudouridine synthase 3, mit...   624   e-176
ref|XP_004515176.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   623   e-176
gb|EMJ11188.1| hypothetical protein PRUPE_ppa005240mg [Prunus pe...   616   e-174
ref|XP_006468112.1| PREDICTED: RNA pseudouridine synthase 3, mit...   615   e-173
ref|XP_004158518.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   614   e-173
ref|XP_004138653.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   613   e-173
ref|XP_006436406.1| hypothetical protein CICLE_v10031422mg [Citr...   612   e-172
ref|XP_006385075.1| hypothetical protein POPTR_0004s23670g [Popu...   609   e-172
ref|XP_006389943.1| hypothetical protein EUTSA_v10018480mg [Eutr...   600   e-169
ref|XP_004300876.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   600   e-169

>gb|EAZ43360.1| hypothetical protein OsJ_27960 [Oryza sativa Japonica Group]
          Length = 509

 Score =  712 bits (1838), Expect = 0.0
 Identities = 347/470 (73%), Positives = 403/470 (85%), Gaps = 4/470 (0%)
 Frame = -2

Query: 1460 AVRWLSRVAPPAPVKAEPII-RVS-NNIARLGEPKRAPKPRQLLSLPPFPNSGT-EPLPG 1290
            AVRWLSR+APPAP +A+P++ RV  +N+ARLG+PK  P+PRQLLSLPPFP  G  +PLPG
Sbjct: 45   AVRWLSRLAPPAPAEADPVVVRVDGSNVARLGKPKPGPRPRQLLSLPPFPGGGDGDPLPG 104

Query: 1289 RKKSAGSCGKQRRVTAISWVKHYFADIEEEAIRWHFNKGLVYIESSNQDNQAKE-NNFTC 1113
            RK +A      RRVTA+SWVKHY AD+ +E ++ HFNK LVY E S+ +   +   +   
Sbjct: 105  RKAAA-----PRRVTAVSWVKHYLADVPQEVVQAHFNKRLVYSECSDHEVSVETIKSQKH 159

Query: 1112 SLEKIKHDHVMESGVRIHLPVSVGETKITKRYSTIPTATLNPNADEIEYMKRLVIHKDSA 933
             L+KIKH+ VME G+RIHLPVSV E +I KRY TIPTATL+PN DEIEY++RLVIHKDSA
Sbjct: 160  HLKKIKHNDVMEPGMRIHLPVSVAEGEIKKRYETIPTATLHPNKDEIEYLRRLVIHKDSA 219

Query: 932  IFVLNKPPKVPVNGNLPVHNSMDILAAAALSNGSDQGPKLVHRLDRESSGLLLMGRTKES 753
            I VLNKPPKVP+ GNLPVHNSMD+LAAAALS G+++GPKLVHRLDRESSGLLL GRTKES
Sbjct: 220  ILVLNKPPKVPMKGNLPVHNSMDVLAAAALSYGNEEGPKLVHRLDRESSGLLLFGRTKES 279

Query: 752  FTRLHWLFTNVNLAKSSSEIWNNACEATMQRYWALVIGTPKEKEGVISAPLTKVVLNDGK 573
            FTRLHWLFT+VNLAK++S++WN ACEA MQRYWALVIGTPKE+EG+ISAPL+KV+L+DGK
Sbjct: 280  FTRLHWLFTSVNLAKTNSQVWNAACEAYMQRYWALVIGTPKEREGIISAPLSKVLLDDGK 339

Query: 572  GERVILAHPSGIDGSQEATTEYRVMGPTINGCSWIELCPLTSRKHQLRVHCAEALGTPIV 393
             ERVILAHPSGIDG+QEA T YRVMGPTI+GCSWIEL PLT RKHQLRVHCAEALGTPIV
Sbjct: 340  AERVILAHPSGIDGAQEAVTAYRVMGPTIHGCSWIELRPLTGRKHQLRVHCAEALGTPIV 399

Query: 392  GDYKYGWFVQQRWKQMPRQDFEPSSGEPYKLRRPEGLAVQKGSVLSKVPLLHLHCREMVI 213
            GDYKYGWFV QRWKQ P+ DFEP +GEPYKLRRPEGL +QKGSVLSKVPLLHLHCREMVI
Sbjct: 400  GDYKYGWFVHQRWKQNPQPDFEPFTGEPYKLRRPEGLEIQKGSVLSKVPLLHLHCREMVI 459

Query: 212  PNISKFLGSSGEWLDETNEWAASQPDLLRFVASMPSHMKISWNLMSSYLV 63
            PNI+KFL S+GEW +    W+  +P+LLRF+A MP+HMKISWN+MSSYLV
Sbjct: 460  PNIAKFLSSNGEWHENGAPWSKEKPNLLRFIAPMPAHMKISWNIMSSYLV 509


>ref|NP_001062265.1| Os08g0520100 [Oryza sativa Japonica Group]
            gi|122234516|sp|Q0J4D4.1|PUS3_ORYSJ RecName: Full=RNA
            pseudouridine synthase 3, mitochondrial; AltName:
            Full=RNA pseudouridylate synthase 3; AltName:
            Full=RNA-uridine isomerase 3; Flags: Precursor
            gi|113624234|dbj|BAF24179.1| Os08g0520100 [Oryza sativa
            Japonica Group] gi|125562210|gb|EAZ07658.1| hypothetical
            protein OsI_29911 [Oryza sativa Indica Group]
          Length = 475

 Score =  712 bits (1838), Expect = 0.0
 Identities = 347/470 (73%), Positives = 403/470 (85%), Gaps = 4/470 (0%)
 Frame = -2

Query: 1460 AVRWLSRVAPPAPVKAEPII-RVS-NNIARLGEPKRAPKPRQLLSLPPFPNSGT-EPLPG 1290
            AVRWLSR+APPAP +A+P++ RV  +N+ARLG+PK  P+PRQLLSLPPFP  G  +PLPG
Sbjct: 11   AVRWLSRLAPPAPAEADPVVVRVDGSNVARLGKPKPGPRPRQLLSLPPFPGGGDGDPLPG 70

Query: 1289 RKKSAGSCGKQRRVTAISWVKHYFADIEEEAIRWHFNKGLVYIESSNQDNQAKE-NNFTC 1113
            RK +A      RRVTA+SWVKHY AD+ +E ++ HFNK LVY E S+ +   +   +   
Sbjct: 71   RKAAA-----PRRVTAVSWVKHYLADVPQEVVQAHFNKRLVYSECSDHEVSVETIKSQKH 125

Query: 1112 SLEKIKHDHVMESGVRIHLPVSVGETKITKRYSTIPTATLNPNADEIEYMKRLVIHKDSA 933
             L+KIKH+ VME G+RIHLPVSV E +I KRY TIPTATL+PN DEIEY++RLVIHKDSA
Sbjct: 126  HLKKIKHNDVMEPGMRIHLPVSVAEGEIKKRYETIPTATLHPNKDEIEYLRRLVIHKDSA 185

Query: 932  IFVLNKPPKVPVNGNLPVHNSMDILAAAALSNGSDQGPKLVHRLDRESSGLLLMGRTKES 753
            I VLNKPPKVP+ GNLPVHNSMD+LAAAALS G+++GPKLVHRLDRESSGLLL GRTKES
Sbjct: 186  ILVLNKPPKVPMKGNLPVHNSMDVLAAAALSYGNEEGPKLVHRLDRESSGLLLFGRTKES 245

Query: 752  FTRLHWLFTNVNLAKSSSEIWNNACEATMQRYWALVIGTPKEKEGVISAPLTKVVLNDGK 573
            FTRLHWLFT+VNLAK++S++WN ACEA MQRYWALVIGTPKE+EG+ISAPL+KV+L+DGK
Sbjct: 246  FTRLHWLFTSVNLAKTNSQVWNAACEAYMQRYWALVIGTPKEREGIISAPLSKVLLDDGK 305

Query: 572  GERVILAHPSGIDGSQEATTEYRVMGPTINGCSWIELCPLTSRKHQLRVHCAEALGTPIV 393
             ERVILAHPSGIDG+QEA T YRVMGPTI+GCSWIEL PLT RKHQLRVHCAEALGTPIV
Sbjct: 306  AERVILAHPSGIDGAQEAVTAYRVMGPTIHGCSWIELRPLTGRKHQLRVHCAEALGTPIV 365

Query: 392  GDYKYGWFVQQRWKQMPRQDFEPSSGEPYKLRRPEGLAVQKGSVLSKVPLLHLHCREMVI 213
            GDYKYGWFV QRWKQ P+ DFEP +GEPYKLRRPEGL +QKGSVLSKVPLLHLHCREMVI
Sbjct: 366  GDYKYGWFVHQRWKQNPQPDFEPFTGEPYKLRRPEGLEIQKGSVLSKVPLLHLHCREMVI 425

Query: 212  PNISKFLGSSGEWLDETNEWAASQPDLLRFVASMPSHMKISWNLMSSYLV 63
            PNI+KFL S+GEW +    W+  +P+LLRF+A MP+HMKISWN+MSSYLV
Sbjct: 426  PNIAKFLSSNGEWHENGAPWSKEKPNLLRFIAPMPAHMKISWNIMSSYLV 475


>ref|XP_003572398.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like
            [Brachypodium distachyon]
          Length = 479

 Score =  701 bits (1809), Expect = 0.0
 Identities = 340/467 (72%), Positives = 396/467 (84%), Gaps = 3/467 (0%)
 Frame = -2

Query: 1454 RWLSRVAPPAPVKAEPIIRVSN--NIARLGEPKRAPKPRQLLSLPPFPNSGTEPLPGRKK 1281
            R LSR+APPAP  A P++RV +  N+ARLG PK  P+PRQLLSLPPFP +G +PLPGRK 
Sbjct: 16   RRLSRLAPPAPAAAAPVVRVESGSNVARLGAPKPGPRPRQLLSLPPFP-AGADPLPGRKT 74

Query: 1280 SAGSCGKQRRVTAISWVKHYFADIEEEAIRWHFNKGLVYIESSNQDNQAKE-NNFTCSLE 1104
            +A      RRV+A+SWVKH FAD+ +E ++ HFNK  V+ E S+Q+  A    +    L+
Sbjct: 75   AAAEAS--RRVSAVSWVKHCFADVPQEVVQAHFNKRQVFAECSDQEVSAVSIRSQEHHLK 132

Query: 1103 KIKHDHVMESGVRIHLPVSVGETKITKRYSTIPTATLNPNADEIEYMKRLVIHKDSAIFV 924
            KIKH  VME G+RIHLPVSV E +I KRY TIP ATL+PN DEIEY+KRLVI+KDSAI V
Sbjct: 133  KIKHSEVMEPGMRIHLPVSVAEAEIKKRYETIPAATLHPNKDEIEYLKRLVIYKDSAILV 192

Query: 923  LNKPPKVPVNGNLPVHNSMDILAAAALSNGSDQGPKLVHRLDRESSGLLLMGRTKESFTR 744
            LNKPPKVP+ G+LPVHNSMD+LAAAALS G++ GPKLVHRLDR++SGLLLMGRTKESFTR
Sbjct: 193  LNKPPKVPMKGHLPVHNSMDVLAAAALSYGNEDGPKLVHRLDRDTSGLLLMGRTKESFTR 252

Query: 743  LHWLFTNVNLAKSSSEIWNNACEATMQRYWALVIGTPKEKEGVISAPLTKVVLNDGKGER 564
            LHWLFT+V LA+++S IWN+ACE+ +QRYWALVIGTPKE EGVISAPLTKV+L+DGK ER
Sbjct: 253  LHWLFTSVKLARTASPIWNSACESYLQRYWALVIGTPKESEGVISAPLTKVLLDDGKAER 312

Query: 563  VILAHPSGIDGSQEATTEYRVMGPTINGCSWIELCPLTSRKHQLRVHCAEALGTPIVGDY 384
            VILAHPSGIDG+QEA TEYRVMGPTINGCSWIELCPLT RKHQLRVHCAEALGTPIVGDY
Sbjct: 313  VILAHPSGIDGAQEAVTEYRVMGPTINGCSWIELCPLTGRKHQLRVHCAEALGTPIVGDY 372

Query: 383  KYGWFVQQRWKQMPRQDFEPSSGEPYKLRRPEGLAVQKGSVLSKVPLLHLHCREMVIPNI 204
            KYGWFV QRWKQ P+ DFEP +GE YKLRRPEGL VQKGSVLSKVPLLHLHCREMV+PNI
Sbjct: 373  KYGWFVHQRWKQNPQPDFEPFTGEQYKLRRPEGLEVQKGSVLSKVPLLHLHCREMVVPNI 432

Query: 203  SKFLGSSGEWLDETNEWAASQPDLLRFVASMPSHMKISWNLMSSYLV 63
            +KFL ++G+W D+   W+  +P+LLRF+A MP+HMKISWN+MSSYLV
Sbjct: 433  AKFLSNTGDWHDDGTPWSKEKPNLLRFIAPMPAHMKISWNIMSSYLV 479


>ref|XP_004974856.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like, partial
            [Setaria italica]
          Length = 464

 Score =  694 bits (1792), Expect = 0.0
 Identities = 340/469 (72%), Positives = 398/469 (84%), Gaps = 3/469 (0%)
 Frame = -2

Query: 1460 AVRWLSRVAPPAPVKAEPII-RV-SNNIARLGEPKRAPKPRQLLSLPPFPNSGTEPLPGR 1287
            A+R LSR+APP P  A+P++ RV S+N+ARLG PK  P+PRQLLSLPPFP +G +PLPGR
Sbjct: 3    ALRRLSRLAPPTPAPADPVVVRVDSSNVARLGAPKPGPRPRQLLSLPPFP-AGADPLPGR 61

Query: 1286 KKSAGSCGKQRRVTAISWVKHYFADIEEEAIRWHFNKGLVYIESSNQDNQAKE-NNFTCS 1110
            K         RRVTA+SWVKHYFAD+ +EA++ HFN+ +V+ E S  +  A+        
Sbjct: 62   KVVP------RRVTAVSWVKHYFADVPQEAVQAHFNRRMVFSECSEHEFSAESIRTQKHH 115

Query: 1109 LEKIKHDHVMESGVRIHLPVSVGETKITKRYSTIPTATLNPNADEIEYMKRLVIHKDSAI 930
            L+KIKH+ VME G+RIHLPVSV E +I KRY TIPTATL+PN DEIEY++RLVIH+DS+I
Sbjct: 116  LKKIKHNDVMEPGMRIHLPVSVAEGEIKKRYETIPTATLHPNKDEIEYLRRLVIHRDSSI 175

Query: 929  FVLNKPPKVPVNGNLPVHNSMDILAAAALSNGSDQGPKLVHRLDRESSGLLLMGRTKESF 750
             VLNKPPKVP+ G+LPVHNSMD+LAAAALS G+ +GPKLVHRLDRESSGL+LMGRTKESF
Sbjct: 176  LVLNKPPKVPMKGHLPVHNSMDVLAAAALSYGNKEGPKLVHRLDRESSGLILMGRTKESF 235

Query: 749  TRLHWLFTNVNLAKSSSEIWNNACEATMQRYWALVIGTPKEKEGVISAPLTKVVLNDGKG 570
            T+LHWLFT+VNLA+++S+ WN ACEA +Q+YWALVIGTPKE+EGVISAP++KV+L+DGK 
Sbjct: 236  TQLHWLFTSVNLARTTSQTWNKACEAYVQKYWALVIGTPKEREGVISAPISKVLLDDGKA 295

Query: 569  ERVILAHPSGIDGSQEATTEYRVMGPTINGCSWIELCPLTSRKHQLRVHCAEALGTPIVG 390
            ERVILAHPSGIDG+QEA TEYRVMGPTINGCSWIEL PLT RKHQLRVHCAEALGTPIVG
Sbjct: 296  ERVILAHPSGIDGAQEAITEYRVMGPTINGCSWIELRPLTGRKHQLRVHCAEALGTPIVG 355

Query: 389  DYKYGWFVQQRWKQMPRQDFEPSSGEPYKLRRPEGLAVQKGSVLSKVPLLHLHCREMVIP 210
            DYKYGWFV QRWKQ P+ DFEP +GEPYK+RRPEGL VQKGSVLSKVPLLHLHCREMV+P
Sbjct: 356  DYKYGWFVHQRWKQNPQPDFEPFTGEPYKIRRPEGLEVQKGSVLSKVPLLHLHCREMVLP 415

Query: 209  NISKFLGSSGEWLDETNEWAASQPDLLRFVASMPSHMKISWNLMSSYLV 63
            NI+KFL S GEW D    WA  +P+LLRF+A MP HMKISWN+MSSYLV
Sbjct: 416  NIAKFLSSIGEWHDGGAAWAKEKPNLLRFIAPMPPHMKISWNVMSSYLV 464


>gb|AFW61502.1| hypothetical protein ZEAMMB73_778378 [Zea mays]
          Length = 478

 Score =  691 bits (1784), Expect = 0.0
 Identities = 340/471 (72%), Positives = 398/471 (84%), Gaps = 5/471 (1%)
 Frame = -2

Query: 1460 AVRWLSRVAPPAPVKAEPII-RV-SNNIARLGEPKRAPKPRQLLSLPPFPNSGTEPLPGR 1287
            A+R LSR+APPAP  A+P++ RV +NN+ARLG PK  P+PRQLLSLPPFP +G +PLPGR
Sbjct: 17   ALRRLSRLAPPAPAPADPVVVRVDANNVARLGAPKPRPRPRQLLSLPPFP-AGQDPLPGR 75

Query: 1286 KKSAGSCGKQRRVTAISWVKHYFADIEEEAIRWHFNKGLVYIESSNQDNQAKENNFTCS- 1110
            K +       RRVTA+SWVKHYFAD+ +EA++ HFN+ +V+ E    D++   ++     
Sbjct: 76   KVAP------RRVTAVSWVKHYFADVPQEAVQAHFNRRMVFSEC--YDHKVSADSIRTQK 127

Query: 1109 --LEKIKHDHVMESGVRIHLPVSVGETKITKRYSTIPTATLNPNADEIEYMKRLVIHKDS 936
              L+KIKH+  ME G+RIHLPVSV E+ I KRY TIPTATL+PN DEIEY++RLVI++DS
Sbjct: 128  HHLKKIKHNDAMEPGMRIHLPVSVAESDIKKRYETIPTATLHPNKDEIEYLRRLVIYRDS 187

Query: 935  AIFVLNKPPKVPVNGNLPVHNSMDILAAAALSNGSDQGPKLVHRLDRESSGLLLMGRTKE 756
            AI VLNKPPKVP+ G+LPVHNSMD+LAAAALS GS++GPKLVHRLDRESSGL+LMGRTKE
Sbjct: 188  AILVLNKPPKVPMKGHLPVHNSMDVLAAAALSYGSEEGPKLVHRLDRESSGLILMGRTKE 247

Query: 755  SFTRLHWLFTNVNLAKSSSEIWNNACEATMQRYWALVIGTPKEKEGVISAPLTKVVLNDG 576
            SFTRLHWL T+VNLA++SS+ WN ACEA  Q+YWALVIGTPKE+EGVISAP++KV+L+DG
Sbjct: 248  SFTRLHWLLTSVNLARTSSQTWNKACEAYAQKYWALVIGTPKEREGVISAPISKVLLDDG 307

Query: 575  KGERVILAHPSGIDGSQEATTEYRVMGPTINGCSWIELCPLTSRKHQLRVHCAEALGTPI 396
            K ERVILAHPSGIDG+QEA TEYRVMGPTINGCSWIEL PLT RKHQLRVHCAEALGTPI
Sbjct: 308  KAERVILAHPSGIDGAQEAITEYRVMGPTINGCSWIELQPLTGRKHQLRVHCAEALGTPI 367

Query: 395  VGDYKYGWFVQQRWKQMPRQDFEPSSGEPYKLRRPEGLAVQKGSVLSKVPLLHLHCREMV 216
            VGDYKYGWFV Q WKQ P+ DFEP +GEPYKLRRPEGL +QKGSVLSKVPLLHLHCREMV
Sbjct: 368  VGDYKYGWFVHQTWKQNPQPDFEPFTGEPYKLRRPEGLEIQKGSVLSKVPLLHLHCREMV 427

Query: 215  IPNISKFLGSSGEWLDETNEWAASQPDLLRFVASMPSHMKISWNLMSSYLV 63
            IPNI+KFL S+G W +    WA  +P+LLRFVA MP HMKISWN+MSSYLV
Sbjct: 428  IPNIAKFLSSTGGWHENGTPWAKEKPNLLRFVAPMPPHMKISWNIMSSYLV 478


>ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Vitis
            vinifera]
          Length = 479

 Score =  648 bits (1671), Expect = 0.0
 Identities = 320/472 (67%), Positives = 380/472 (80%), Gaps = 3/472 (0%)
 Frame = -2

Query: 1469 IFEAVRWLSRVAPPAPVKAEPIIRVSNNIARLGEPKRAPKPRQLLSLPPFPNSGTEPLPG 1290
            +F  VR  SR+APP P  A P+IRVSNN+A+LG PK  PKPRQLLSLPPFP     PLPG
Sbjct: 12   LFPVVRHYSRIAPPRPASAAPVIRVSNNVAQLGSPKEGPKPRQLLSLPPFP---AHPLPG 68

Query: 1289 RKKSAGSCGKQRRVTAISWVKHYFADIEEEAIRWHFNKGLVYIESSNQDNQAKENNFTCS 1110
             K      G    VTAISW+K+YF +I    ++ HFNKGLV++E SN D+ + E      
Sbjct: 69   -KSLVNVSGLPTHVTAISWIKYYFDEIPGSVVQSHFNKGLVHMERSNLDDSSLEKEGQIK 127

Query: 1109 -LEKIKHDHVMESGVRIHLPVSVGETKITKRYSTIPTATLNPNADEIEYMKRLVIHKDSA 933
             L KIK + VME+G RI++PVSV E +I+KR+ TIP+ TL+PNADEIEY++RLV +KD A
Sbjct: 128  PLRKIKPNEVMEAGTRIYVPVSVAEARISKRFDTIPSGTLHPNADEIEYLQRLVTYKDPA 187

Query: 932  IFVLNKPPKVPVNGNLPVHNSMDILAAAALSNGSDQGPKLVHRLDRESSGLLLMGRTKES 753
            I VLNKPPKVP+ GNLPVHNSMD LAAAAL+   ++GPKLVHRLDRESSGLLLMGRTKES
Sbjct: 188  ILVLNKPPKVPLKGNLPVHNSMDALAAAALTFDYEEGPKLVHRLDRESSGLLLMGRTKES 247

Query: 752  FTRLHWLFTNVNLAKSSSEIWNNACEATMQRYWALVIGTPKEKEGVISAPLTKVVLNDGK 573
               LHWLF+++N AKS S+ W++ACEAT QRYWALVIG+PK+KEGVI APL+KV+L+DGK
Sbjct: 248  VAHLHWLFSDINKAKSLSKAWDDACEATCQRYWALVIGSPKQKEGVIHAPLSKVLLDDGK 307

Query: 572  GERVILAHPSGIDGSQEATTEYRVMGPTINGCSWIELCPLTSRKHQLRVHCAEALGTPIV 393
             ERVILA+ SG++ SQEA TEYRV+GP INGCSWIELCP TSRKHQLRVHCAEALGTPIV
Sbjct: 308  TERVILANQSGLEASQEAITEYRVLGPMINGCSWIELCPRTSRKHQLRVHCAEALGTPIV 367

Query: 392  GDYKYGWFVQQRWKQMPRQDFEPSSGEPYKLRRPEGLAVQKGSVLSKVPLLHLHCREMVI 213
            GDYKYGWFV +RWKQMPR D EP++G+PYK+RRPEGL VQKGSVLSKVPLLHLHCRE+++
Sbjct: 368  GDYKYGWFVHRRWKQMPRVDLEPTTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELIL 427

Query: 212  PNISKFLGSSGEWLDETNEW--AASQPDLLRFVASMPSHMKISWNLMSSYLV 63
            PNI+KFL          N++   + +PD+LRFVASMP+HMKISWNLMSSYLV
Sbjct: 428  PNIAKFLPILDPKPKNQNQYPKLSLKPDILRFVASMPNHMKISWNLMSSYLV 479


>emb|CBI18448.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score =  639 bits (1649), Expect = 0.0
 Identities = 319/474 (67%), Positives = 379/474 (79%), Gaps = 5/474 (1%)
 Frame = -2

Query: 1469 IFEAVRWLSRVAPPAPVKAEPIIRVSNNIARLGEPKRAPKPRQLLSLPPFPNSGTEPLPG 1290
            +F  VR  SR+APP P  A P+IRVSNN+A+LG PK  PKPRQLLSLPPFP     PLPG
Sbjct: 12   LFPVVRHYSRIAPPRPASAAPVIRVSNNVAQLGSPKEGPKPRQLLSLPPFP---AHPLPG 68

Query: 1289 RKKSAGSCGKQRRVTAISWVKHYFADIEEEAIRWHFNKGLVYIESSNQDNQAKENNFTCS 1110
             K      G    VTAISW+K+YF +I    ++ HFNKGLV++E SN D+ + E      
Sbjct: 69   -KSLVNVSGLPTHVTAISWIKYYFDEIPGSVVQSHFNKGLVHMERSNLDDSSLEKEGQIK 127

Query: 1109 -LEKIKHDHVMESGVRIHLPVSVGETKITKRYSTIPTATLNPNADEIEYMKRLVIHK--D 939
             L KIK + VME+G RI++PVSV E +I+KR+ TIP+ TL+PNADEIEY++RL + K  D
Sbjct: 128  PLRKIKPNEVMEAGTRIYVPVSVAEARISKRFDTIPSGTLHPNADEIEYLQRLWLLKFQD 187

Query: 938  SAIFVLNKPPKVPVNGNLPVHNSMDILAAAALSNGSDQGPKLVHRLDRESSGLLLMGRTK 759
             AI VLNKPPKVP+ GNLPVHNSMD LAAAAL+   ++GPKLVHRLDRESSGLLLMGRTK
Sbjct: 188  PAILVLNKPPKVPLKGNLPVHNSMDALAAAALTFDYEEGPKLVHRLDRESSGLLLMGRTK 247

Query: 758  ESFTRLHWLFTNVNLAKSSSEIWNNACEATMQRYWALVIGTPKEKEGVISAPLTKVVLND 579
            ES   LHWLF+++N AKS S+ W++ACEAT QRYWALVIG+PK+KEGVI APL+KV+L+D
Sbjct: 248  ESVAHLHWLFSDINKAKSLSKAWDDACEATCQRYWALVIGSPKQKEGVIHAPLSKVLLDD 307

Query: 578  GKGERVILAHPSGIDGSQEATTEYRVMGPTINGCSWIELCPLTSRKHQLRVHCAEALGTP 399
            GK ERVILA+ SG++ SQEA TEYRV+GP INGCSWIELCP TSRKHQLRVHCAEALGTP
Sbjct: 308  GKTERVILANQSGLEASQEAITEYRVLGPMINGCSWIELCPRTSRKHQLRVHCAEALGTP 367

Query: 398  IVGDYKYGWFVQQRWKQMPRQDFEPSSGEPYKLRRPEGLAVQKGSVLSKVPLLHLHCREM 219
            IVGDYKYGWFV +RWKQMPR D EP++G+PYK+RRPEGL VQKGSVLSKVPLLHLHCRE+
Sbjct: 368  IVGDYKYGWFVHRRWKQMPRVDLEPTTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCREL 427

Query: 218  VIPNISKFLGSSGEWLDETNEW--AASQPDLLRFVASMPSHMKISWNLMSSYLV 63
            ++PNI+KFL          N++   + +PD+LRFVASMP+HMKISWNLMSSYLV
Sbjct: 428  ILPNIAKFLPILDPKPKNQNQYPKLSLKPDILRFVASMPNHMKISWNLMSSYLV 481


>ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223533842|gb|EEF35573.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 468

 Score =  634 bits (1636), Expect = e-179
 Identities = 319/464 (68%), Positives = 366/464 (78%)
 Frame = -2

Query: 1454 RWLSRVAPPAPVKAEPIIRVSNNIARLGEPKRAPKPRQLLSLPPFPNSGTEPLPGRKKSA 1275
            R  SR+APP P  A P+IRVSNN+A LG PK  PKPRQLLSLPPFP     PLPGR   A
Sbjct: 15   RSYSRIAPPPPAYANPVIRVSNNVAHLGSPKDGPKPRQLLSLPPFPGL---PLPGRNSMA 71

Query: 1274 GSCGKQRRVTAISWVKHYFADIEEEAIRWHFNKGLVYIESSNQDNQAKENNFTCSLEKIK 1095
                    VTAISWVK+YF +I + AI+ HFNKGL +IE  N      E     SL KIK
Sbjct: 72   S------HVTAISWVKYYFDEILDSAIQSHFNKGLAHIECPNGSGSI-EYGGQMSLRKIK 124

Query: 1094 HDHVMESGVRIHLPVSVGETKITKRYSTIPTATLNPNADEIEYMKRLVIHKDSAIFVLNK 915
            H+ +ME+G R+H+ VSV ET+I+KR+ TIP+ TL PNADEI+Y++RLV +KDSAI VLNK
Sbjct: 125  HNDIMEAGARVHVAVSVAETRISKRFDTIPSGTLYPNADEIQYLQRLVKYKDSAIIVLNK 184

Query: 914  PPKVPVNGNLPVHNSMDILAAAALSNGSDQGPKLVHRLDRESSGLLLMGRTKESFTRLHW 735
            PP++PV GNLP+HNSMD LAAAALS   D+GPKLV RLDRESSGLLLMGRTKES   L W
Sbjct: 185  PPRLPVKGNLPLHNSMDALAAAALSYDYDEGPKLVQRLDRESSGLLLMGRTKESIDHLQW 244

Query: 734  LFTNVNLAKSSSEIWNNACEATMQRYWALVIGTPKEKEGVISAPLTKVVLNDGKGERVIL 555
            LF++VN + S  + WN+AC+AT QRYWALVIG+PKEKEG+I APL+KV+LNDGK ERV+L
Sbjct: 245  LFSDVNKSNSRCKAWNDACKATYQRYWALVIGSPKEKEGLIRAPLSKVLLNDGKTERVVL 304

Query: 554  AHPSGIDGSQEATTEYRVMGPTINGCSWIELCPLTSRKHQLRVHCAEALGTPIVGDYKYG 375
            A  SG++ SQEA TEYRV+GP INGCSWIEL PLTSRKHQLRVHCAEALGTPIVGDYKYG
Sbjct: 305  AQHSGLEASQEALTEYRVLGPRINGCSWIELRPLTSRKHQLRVHCAEALGTPIVGDYKYG 364

Query: 374  WFVQQRWKQMPRQDFEPSSGEPYKLRRPEGLAVQKGSVLSKVPLLHLHCREMVIPNISKF 195
            W V QRWKQMPR D EP SG+PYKLRRP GL VQKGSVLSKVPLLHLHCRE V+PNI+KF
Sbjct: 365  WCVHQRWKQMPRVDIEPFSGKPYKLRRPAGLDVQKGSVLSKVPLLHLHCREFVLPNIAKF 424

Query: 194  LGSSGEWLDETNEWAASQPDLLRFVASMPSHMKISWNLMSSYLV 63
            L    E  +  +    ++PDLLRFVASMP+HMKISWNLMSSYLV
Sbjct: 425  LAVLNEKSENIHPALDAKPDLLRFVASMPTHMKISWNLMSSYLV 468


>gb|EOY26277.1| Pseudouridine synthase family protein [Theobroma cacao]
          Length = 471

 Score =  630 bits (1626), Expect = e-178
 Identities = 314/466 (67%), Positives = 370/466 (79%), Gaps = 1/466 (0%)
 Frame = -2

Query: 1457 VRWLSRVAPPAPVKAEPIIRVSNNIARLGEPKRAPKPRQLLSLPPFPNSGTEPLPGRKKS 1278
            VR  SRVAPP P  A+P++RVSN++A LG PK+ PKPRQLLSLPPFP     PLPG+   
Sbjct: 14   VRHYSRVAPPPPAYADPVLRVSNSVAYLGAPKQGPKPRQLLSLPPFPGY---PLPGKNP- 69

Query: 1277 AGSCGKQRRVTAISWVKHYFADIEEEAIRWHFNKGLVYIESSNQ-DNQAKENNFTCSLEK 1101
                G   RVTAISW+K+YF +I + AI+ HFNKGLV +ESSN  D   + +     L K
Sbjct: 70   ----GGTARVTAISWLKYYFDEIPDSAIQSHFNKGLVQMESSNAGDTCIERDGLMKPLRK 125

Query: 1100 IKHDHVMESGVRIHLPVSVGETKITKRYSTIPTATLNPNADEIEYMKRLVIHKDSAIFVL 921
            IKH+ VME G R+ +PVS+ ET+I+KR+  IP+ TL PN DEI+Y++RLV +KD AI VL
Sbjct: 126  IKHNEVMEVGTRVWVPVSIAETRISKRFDCIPSGTLYPNKDEIDYLQRLVKYKDYAILVL 185

Query: 920  NKPPKVPVNGNLPVHNSMDILAAAALSNGSDQGPKLVHRLDRESSGLLLMGRTKESFTRL 741
            NKPPK+PV G+LPVHNSMD LAAAALS   D+GPKLVHRLDRESSGLLLMGRTKES   L
Sbjct: 186  NKPPKLPVKGSLPVHNSMDALAAAALSYDHDEGPKLVHRLDRESSGLLLMGRTKESVAHL 245

Query: 740  HWLFTNVNLAKSSSEIWNNACEATMQRYWALVIGTPKEKEGVISAPLTKVVLNDGKGERV 561
            HWLF ++N  KSS + WN+AC+   QR+WALVIGTPKEKEG+I APL+K++L+DGK ERV
Sbjct: 246  HWLFNDLNTVKSSCKAWNDACDVKYQRFWALVIGTPKEKEGLICAPLSKILLDDGKTERV 305

Query: 560  ILAHPSGIDGSQEATTEYRVMGPTINGCSWIELCPLTSRKHQLRVHCAEALGTPIVGDYK 381
            ILA   G++ SQEA TEYRV+GP INGCSWIEL PLTSRKHQLRVHCAEALGTPIVGDYK
Sbjct: 306  ILAQNVGLEASQEAITEYRVLGPMINGCSWIELRPLTSRKHQLRVHCAEALGTPIVGDYK 365

Query: 380  YGWFVQQRWKQMPRQDFEPSSGEPYKLRRPEGLAVQKGSVLSKVPLLHLHCREMVIPNIS 201
            YGWFV +RWKQMPR D EP++G+PYKLRRPEGL VQKGSVLSKVPLLHLHCRE+V+PNI+
Sbjct: 366  YGWFVHRRWKQMPRVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIA 425

Query: 200  KFLGSSGEWLDETNEWAASQPDLLRFVASMPSHMKISWNLMSSYLV 63
            KFL    +  +      + +PDLLRFVA+MP HMKISWNLMSSYLV
Sbjct: 426  KFLPVLNKNTETLPPALSMKPDLLRFVATMPKHMKISWNLMSSYLV 471


>gb|ESW32964.1| hypothetical protein PHAVU_001G032500g [Phaseolus vulgaris]
          Length = 480

 Score =  629 bits (1621), Expect = e-177
 Identities = 307/466 (65%), Positives = 367/466 (78%), Gaps = 1/466 (0%)
 Frame = -2

Query: 1457 VRWLSRVAPPAPVKAEPIIRVSNNIARLGEPKRAPKPRQLLSLPPFPNSGTEPLPGRKKS 1278
            VR  SR+ PP PV  EP+IRVSNN+ARL  PK  PKPRQLLSLPPFP     PLP  K S
Sbjct: 19   VRHYSRIQPPRPVSVEPVIRVSNNVARLDAPKEGPKPRQLLSLPPFPG---HPLPA-KSS 74

Query: 1277 AGSCGKQRRVTAISWVKHYFADIEEEAIRWHFNKGLVYIESS-NQDNQAKENNFTCSLEK 1101
                G++  VTA++W+K+YF       I  HF +GLV +E     D+  ++ N    + K
Sbjct: 75   TSDPGQRDYVTAVNWIKYYFKGAWGSVIESHFREGLVQMEDEVTADSYTQKENLMKPMRK 134

Query: 1100 IKHDHVMESGVRIHLPVSVGETKITKRYSTIPTATLNPNADEIEYMKRLVIHKDSAIFVL 921
            I+ + VM+ G R+H+PVS+ ET+++KRY  IP  TL PNADEI+Y++RLVI+KDSAI VL
Sbjct: 135  IRPNEVMKHGARVHVPVSIAETRVSKRYDAIPCGTLYPNADEIKYLQRLVIYKDSAIIVL 194

Query: 920  NKPPKVPVNGNLPVHNSMDILAAAALSNGSDQGPKLVHRLDRESSGLLLMGRTKESFTRL 741
            NKPPK+PV GNLPVHNSMD LAAAALS   D+GPKLVHRLDRE+SG+LL+GRTK+S + L
Sbjct: 195  NKPPKLPVKGNLPVHNSMDALAAAALSYDYDEGPKLVHRLDRETSGILLLGRTKDSASHL 254

Query: 740  HWLFTNVNLAKSSSEIWNNACEATMQRYWALVIGTPKEKEGVISAPLTKVVLNDGKGERV 561
             WLFTN+N AKSS + WN+ACEAT QRYWALVIGTPKEKEG+I APL+KV+LNDGK ER+
Sbjct: 255  QWLFTNINNAKSSCKAWNDACEATYQRYWALVIGTPKEKEGIIHAPLSKVLLNDGKTERI 314

Query: 560  ILAHPSGIDGSQEATTEYRVMGPTINGCSWIELCPLTSRKHQLRVHCAEALGTPIVGDYK 381
            ILA+ S ++  QEA TE+RV+GP INGCSW+EL PLT RKHQLRVHCAEALGTPIVGDYK
Sbjct: 315  ILANHSSVEPRQEAVTEFRVLGPKINGCSWVELRPLTYRKHQLRVHCAEALGTPIVGDYK 374

Query: 380  YGWFVQQRWKQMPRQDFEPSSGEPYKLRRPEGLAVQKGSVLSKVPLLHLHCREMVIPNIS 201
            YGWFV  RWKQMPR D EP++G+PYKLRRPEGL VQKGSVLSKVPLLHLHCRE+V+PNI+
Sbjct: 375  YGWFVHSRWKQMPRIDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIA 434

Query: 200  KFLGSSGEWLDETNEWAASQPDLLRFVASMPSHMKISWNLMSSYLV 63
            KFL       +E +     QP++LRFVA+MPSHM+ISWNLMSSYLV
Sbjct: 435  KFLHVLNNSSEELHSSLNQQPEVLRFVATMPSHMRISWNLMSSYLV 480


>ref|XP_006601250.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform
            X1 [Glycine max]
          Length = 476

 Score =  624 bits (1609), Expect = e-176
 Identities = 309/465 (66%), Positives = 365/465 (78%), Gaps = 1/465 (0%)
 Frame = -2

Query: 1454 RWLSRVAPPAPVKAEPIIRVSNNIARLGEPKRAPKPRQLLSLPPFPNSGTEPLPGRKKSA 1275
            R  SR+ PP PV  EP+I VSNNIARL  PK  PKPRQLLSLPPFP     PLP +   +
Sbjct: 19   RHYSRIQPPRPVSVEPVISVSNNIARLDAPKEGPKPRQLLSLPPFPG---HPLPDKSSIS 75

Query: 1274 GSCGKQRR-VTAISWVKHYFADIEEEAIRWHFNKGLVYIESSNQDNQAKENNFTCSLEKI 1098
            GS  +QR  VTA++W+K+YF       I  HF +GLV +E+ +   Q +E      + KI
Sbjct: 76   GS--RQRDYVTAVNWIKYYFKGTWGSVIESHFREGLVQMEADDSSTQKEEQ--MKPMRKI 131

Query: 1097 KHDHVMESGVRIHLPVSVGETKITKRYSTIPTATLNPNADEIEYMKRLVIHKDSAIFVLN 918
            + + VM+ G R+H+PVS+ ET+I+KRY  IP+ TL PNADEI+Y++RLVI+KDSAI VLN
Sbjct: 132  RPNEVMKRGARVHVPVSICETRISKRYDAIPSGTLYPNADEIKYLQRLVIYKDSAIIVLN 191

Query: 917  KPPKVPVNGNLPVHNSMDILAAAALSNGSDQGPKLVHRLDRESSGLLLMGRTKESFTRLH 738
            KPPK+PV G+LPVHNSMD LAAAALS   D+GPKLVHRLDRESSG+LL+GRTK+S + L 
Sbjct: 192  KPPKLPVKGSLPVHNSMDALAAAALSYDYDEGPKLVHRLDRESSGILLLGRTKDSVSHLQ 251

Query: 737  WLFTNVNLAKSSSEIWNNACEATMQRYWALVIGTPKEKEGVISAPLTKVVLNDGKGERVI 558
            WLF+N+N AKSS + WN ACEAT QRYWALVIGTPKEKEG+I APL+KV+LNDGK ER+I
Sbjct: 252  WLFSNINNAKSSCKDWNEACEATYQRYWALVIGTPKEKEGIIHAPLSKVLLNDGKTERII 311

Query: 557  LAHPSGIDGSQEATTEYRVMGPTINGCSWIELCPLTSRKHQLRVHCAEALGTPIVGDYKY 378
            LAH S ++  QEA TEYRV+GP INGCSW+EL PLT RKHQLRVHCAEALGTPIVGDYKY
Sbjct: 312  LAHHSSVEPRQEAVTEYRVLGPQINGCSWVELRPLTYRKHQLRVHCAEALGTPIVGDYKY 371

Query: 377  GWFVQQRWKQMPRQDFEPSSGEPYKLRRPEGLAVQKGSVLSKVPLLHLHCREMVIPNISK 198
            GWFV  RWKQMPR D EP++G+PYKLRRPEGL VQKGSVLSKVPLLHLHCRE+V+PNI K
Sbjct: 372  GWFVHSRWKQMPRVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIVK 431

Query: 197  FLGSSGEWLDETNEWAASQPDLLRFVASMPSHMKISWNLMSSYLV 63
            F+       +E       QPD+LRFVA+MPSHM+ISWNLMSSYLV
Sbjct: 432  FMHVLNNSSEELRTSLREQPDVLRFVATMPSHMRISWNLMSSYLV 476


>ref|XP_004515176.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like isoform X1
            [Cicer arietinum]
          Length = 479

 Score =  623 bits (1606), Expect = e-176
 Identities = 308/466 (66%), Positives = 365/466 (78%), Gaps = 1/466 (0%)
 Frame = -2

Query: 1457 VRWLSRVAPPAPVKAEPIIRVSNNIARLGEPKRAPKPRQLLSLPPFPNSGTEPLPGRKKS 1278
            VR  SR+ PP PV  E +IRVSNNIARL  PK  PKPRQLLSLPPFP     PLPG K S
Sbjct: 18   VRHYSRIRPPKPVSVEKVIRVSNNIARLDVPKEGPKPRQLLSLPPFP---CHPLPG-KNS 73

Query: 1277 AGSCGKQRRVTAISWVKHYFADIEEEAIRWHFNKGLVYIESSNQDNQAKENNFTCS-LEK 1101
              + GK+  VTA++W+K+YF       I  HF +GLV +E    D+  K+       + K
Sbjct: 74   TSAPGKRDHVTAVNWIKYYFKGTSGSVIESHFREGLVQMEDLIVDDSFKQKKELMKPMRK 133

Query: 1100 IKHDHVMESGVRIHLPVSVGETKITKRYSTIPTATLNPNADEIEYMKRLVIHKDSAIFVL 921
            I+ + VM+ G R+H+ VS+ ETKI+KR+  IP+ TL PNADEI+Y++RLVI+KDSAI +L
Sbjct: 134  IRPNEVMKPGARVHVSVSMAETKISKRFDPIPSGTLCPNADEIKYLQRLVIYKDSAIIML 193

Query: 920  NKPPKVPVNGNLPVHNSMDILAAAALSNGSDQGPKLVHRLDRESSGLLLMGRTKESFTRL 741
            NKPPK+PV GNLPVHNSMD LAAAALS   D GPKLVHRLDRESSG+LL+GRTK+S + L
Sbjct: 194  NKPPKLPVKGNLPVHNSMDALAAAALSYDYDDGPKLVHRLDRESSGILLLGRTKDSVSHL 253

Query: 740  HWLFTNVNLAKSSSEIWNNACEATMQRYWALVIGTPKEKEGVISAPLTKVVLNDGKGERV 561
             WLF+N+N  KSS + WN+ACE+T QRYWALVIGTPKEKEG+I APL+KV+LNDGK ERV
Sbjct: 254  QWLFSNINNTKSSCKAWNDACESTYQRYWALVIGTPKEKEGIIHAPLSKVLLNDGKTERV 313

Query: 560  ILAHPSGIDGSQEATTEYRVMGPTINGCSWIELCPLTSRKHQLRVHCAEALGTPIVGDYK 381
            ILAH S I+  QEA TEYRV+GP INGCSW+EL PLT RKHQLRVHCAEALGTPIVGDYK
Sbjct: 314  ILAHESSIEPHQEAVTEYRVLGPKINGCSWVELRPLTYRKHQLRVHCAEALGTPIVGDYK 373

Query: 380  YGWFVQQRWKQMPRQDFEPSSGEPYKLRRPEGLAVQKGSVLSKVPLLHLHCREMVIPNIS 201
            YGWFV  RWKQMPR D EP++G+PYKLRRPEGL VQKGSVLSKVPLLHLHCRE+ +PNI+
Sbjct: 374  YGWFVHSRWKQMPRVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELALPNIA 433

Query: 200  KFLGSSGEWLDETNEWAASQPDLLRFVASMPSHMKISWNLMSSYLV 63
            KFL    +   + +   + QPD+LRFVA+MP+HM+ISWNLMSSYLV
Sbjct: 434  KFLNVLEKSSQQLDPSLSLQPDVLRFVATMPNHMRISWNLMSSYLV 479


>gb|EMJ11188.1| hypothetical protein PRUPE_ppa005240mg [Prunus persica]
          Length = 471

 Score =  616 bits (1589), Expect = e-174
 Identities = 310/466 (66%), Positives = 368/466 (78%)
 Frame = -2

Query: 1460 AVRWLSRVAPPAPVKAEPIIRVSNNIARLGEPKRAPKPRQLLSLPPFPNSGTEPLPGRKK 1281
            A R  SRV PP    A P+IRVSN++ARLG PK  PKPRQLLSLPPFP     PLPG++ 
Sbjct: 14   ARREYSRVCPPPAKSAGPLIRVSNHVARLGPPKEGPKPRQLLSLPPFPG---HPLPGKRS 70

Query: 1280 SAGSCGKQRRVTAISWVKHYFADIEEEAIRWHFNKGLVYIESSNQDNQAKENNFTCSLEK 1101
              G  G   RVTA+SWVK+YF  I +  I+ HF +GLV +E      +  +      + K
Sbjct: 71   HEG--GVVSRVTAVSWVKYYFDGIYDSTIQSHFKQGLVQMECPGMIEKEGQMK---PMRK 125

Query: 1100 IKHDHVMESGVRIHLPVSVGETKITKRYSTIPTATLNPNADEIEYMKRLVIHKDSAIFVL 921
            I+   VME G R+++PVSV E+++++R+  IP+ TL PNADEIEYM+R V +KDSAI VL
Sbjct: 126  IRPSEVMEVGARVYVPVSVVESRVSRRFDCIPSGTLYPNADEIEYMQRRVKYKDSAIIVL 185

Query: 920  NKPPKVPVNGNLPVHNSMDILAAAALSNGSDQGPKLVHRLDRESSGLLLMGRTKESFTRL 741
            NKPPK+PV GNLPVHNSMD LAAAALS G+++GPKLVHRLDRESSGL LMGRTKES + L
Sbjct: 186  NKPPKLPVKGNLPVHNSMDALAAAALSYGNNKGPKLVHRLDRESSGLHLMGRTKESVSLL 245

Query: 740  HWLFTNVNLAKSSSEIWNNACEATMQRYWALVIGTPKEKEGVISAPLTKVVLNDGKGERV 561
             WL+T+ N  KSS + W++ACEA  QRYWALVIG+PKEKEG+I APL+KV+L++GK ERV
Sbjct: 246  QWLYTDFNKGKSSCQAWDDACEARYQRYWALVIGSPKEKEGLICAPLSKVLLDNGKTERV 305

Query: 560  ILAHPSGIDGSQEATTEYRVMGPTINGCSWIELCPLTSRKHQLRVHCAEALGTPIVGDYK 381
            ILAH SG++ SQ+A T+YRV+GPTINGCSWIEL PLTSRKHQLRVHCAEALGTPIVGDYK
Sbjct: 306  ILAHQSGLEASQKAITQYRVLGPTINGCSWIELRPLTSRKHQLRVHCAEALGTPIVGDYK 365

Query: 380  YGWFVQQRWKQMPRQDFEPSSGEPYKLRRPEGLAVQKGSVLSKVPLLHLHCREMVIPNIS 201
            YGWFV +RWKQMP  D EP+SG PYKLRRP GL VQKGSVLSKVPLLHLHCRE+V+PNI+
Sbjct: 366  YGWFVHRRWKQMPHVDVEPTSGLPYKLRRPAGLDVQKGSVLSKVPLLHLHCRELVLPNIA 425

Query: 200  KFLGSSGEWLDETNEWAASQPDLLRFVASMPSHMKISWNLMSSYLV 63
            KFL    + LD  +   +S+PD+LRFVASMPSHMKISWNLMSSYLV
Sbjct: 426  KFLLILDQKLDSLHPAVSSKPDILRFVASMPSHMKISWNLMSSYLV 471


>ref|XP_006468112.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like [Citrus
            sinensis]
          Length = 471

 Score =  615 bits (1585), Expect = e-173
 Identities = 310/470 (65%), Positives = 371/470 (78%), Gaps = 4/470 (0%)
 Frame = -2

Query: 1460 AVRWLSRVAPPAPVKAEPIIRVSNN-IARLGEPKRAPKPRQLLSLPPFPNSGTEPLPGRK 1284
            ++R  SR++PP P     +IRVS   +A LG PK  PKPRQLLSLPPFP      LPG+ 
Sbjct: 14   SIRHYSRISPPRPA----VIRVSEKKVAHLGPPKAGPKPRQLLSLPPFPGHN---LPGKH 66

Query: 1283 KSAGSCGKQRRVTAISWVKHYFADIEEEAIRWHFNKGLVYIESSNQDNQAKENNFTCSLE 1104
                  G+Q  VTA+SWVK+YF ++++  I+ HFNKGLV +E +N  +   E      + 
Sbjct: 67   -----WGRQGHVTAVSWVKYYFDEVQDSVIQSHFNKGLVQMECANMGDSFVEQGQMKPIR 121

Query: 1103 KIKHDHVMESGVRIHLPVSVGETKITKRYSTIPTATLNPNADEIEYMKRLVIHKDSAIFV 924
            KIK + VME G RI LPVS+ E +I+KRY TIP+ TLNPNADEI+Y++RLV ++DSAI V
Sbjct: 122  KIKTNEVMEPGARIFLPVSMVEGRISKRYDTIPSGTLNPNADEIDYLRRLVKYRDSAILV 181

Query: 923  LNKPPKVPVNGNLPVHNSMDILAAAALSNGSDQGPKLVHRLDRESSGLLLMGRTKESFTR 744
            LNKPPKVP+ GNLPVHNSMD LAAAALS  +++GPKLVHRLDRESSGLLLMGRTKES + 
Sbjct: 182  LNKPPKVPLKGNLPVHNSMDALAAAALSYDNNEGPKLVHRLDRESSGLLLMGRTKESVSL 241

Query: 743  LHWLFTNVNLAKSSSEIWNNACEATMQRYWALVIGTPKEKEGVISAPLTKVVLNDGKGER 564
            L WLF++VN +KS S+ WN+ACEA  QRYWALVIG+P+EK+G+I APL+KV+L+DGK ER
Sbjct: 242  LTWLFSDVNKSKSLSKAWNDACEAMYQRYWALVIGSPREKQGIIRAPLSKVLLDDGKTER 301

Query: 563  VILAHPSGIDGSQEATTEYRVMGPTINGCSWIELCPLTSRKHQLRVHCAEALGTPIVGDY 384
            +ILA  SG++ SQEA TEYRV+GP INGCSWIEL PLT RKHQLRVHCAEALGTPIVGDY
Sbjct: 302  IILAQNSGLEASQEAMTEYRVLGPMINGCSWIELRPLTCRKHQLRVHCAEALGTPIVGDY 361

Query: 383  KYGWFVQQRWKQMPRQDFEPSSGEPYKLRRPEGLAVQKGSVLSKVPLLHLHCREMVIPNI 204
            KYGWFV +RWKQMPR D EP+SG+PYKLRRP+GL VQKGSVLSKVPLLHLHCRE+V+PNI
Sbjct: 362  KYGWFVHRRWKQMPRVDIEPTSGKPYKLRRPDGLDVQKGSVLSKVPLLHLHCRELVLPNI 421

Query: 203  SKFLGSSGEWLDETNEWAASQ---PDLLRFVASMPSHMKISWNLMSSYLV 63
            +KF+    +  D      +S+   PDLLRFVASMPSHMKISWNLMSSYLV
Sbjct: 422  AKFINVLNQKSDNLFPTLSSKPDGPDLLRFVASMPSHMKISWNLMSSYLV 471


>ref|XP_004158518.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Cucumis
            sativus]
          Length = 471

 Score =  614 bits (1583), Expect = e-173
 Identities = 309/466 (66%), Positives = 359/466 (77%)
 Frame = -2

Query: 1460 AVRWLSRVAPPAPVKAEPIIRVSNNIARLGEPKRAPKPRQLLSLPPFPNSGTEPLPGRKK 1281
            A R  SR++PP P  A+PIIRVSNNIA+LG PK  PK RQLLSLPPFP     PLPG K 
Sbjct: 12   ATRCYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPGY---PLPG-KN 67

Query: 1280 SAGSCGKQRRVTAISWVKHYFADIEEEAIRWHFNKGLVYIESSNQDNQAKENNFTCSLEK 1101
              G  G+   VTAI WVK+YF +I++  I+ HF KGLV +E        ++ N    + K
Sbjct: 68   QVGVSGESTHVTAIRWVKYYFDEIQDSQIQSHFRKGLVQVECPQLGGLDEKGNLK-PMRK 126

Query: 1100 IKHDHVMESGVRIHLPVSVGETKITKRYSTIPTATLNPNADEIEYMKRLVIHKDSAIFVL 921
            I+   +ME+G RIHLPVSV E K+ +R+ TIP+ TL PNADEI+Y++RLV +KDSAI VL
Sbjct: 127  IRSGEIMETGARIHLPVSVAEMKVARRFDTIPSGTLYPNADEIKYLQRLVKYKDSAIIVL 186

Query: 920  NKPPKVPVNGNLPVHNSMDILAAAALSNGSDQGPKLVHRLDRESSGLLLMGRTKESFTRL 741
            NKPPK+PV G LPVHNSMD LA AALS   D GPKLVHRLDRESSG+LLMGRTKES   L
Sbjct: 187  NKPPKLPVKGTLPVHNSMDALADAALSYDYDDGPKLVHRLDRESSGILLMGRTKESVDHL 246

Query: 740  HWLFTNVNLAKSSSEIWNNACEATMQRYWALVIGTPKEKEGVISAPLTKVVLNDGKGERV 561
             WLF+N+  AK + + W  AC AT Q+YWALVIG P+E+EGVISAPL+KV+L+DGK ERV
Sbjct: 247  QWLFSNIRNAKFTCKAWEEACNATYQKYWALVIGCPREREGVISAPLSKVLLDDGKTERV 306

Query: 560  ILAHPSGIDGSQEATTEYRVMGPTINGCSWIELCPLTSRKHQLRVHCAEALGTPIVGDYK 381
            ILA+ + I+ SQEA TEYRV+GPTINGCSWIELCP TSRKHQLR+HCAEALGTPIVGDYK
Sbjct: 307  ILANKASIEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTPIVGDYK 366

Query: 380  YGWFVQQRWKQMPRQDFEPSSGEPYKLRRPEGLAVQKGSVLSKVPLLHLHCREMVIPNIS 201
            YGWFV +RWKQMPR D EP SG PYKLRRPEGL VQKGSVLSKVPLLHLHCRE+V+PNI+
Sbjct: 367  YGWFVHRRWKQMPRVDVEPISGRPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIA 426

Query: 200  KFLGSSGEWLDETNEWAASQPDLLRFVASMPSHMKISWNLMSSYLV 63
            KFL +           ++   DLLRFVA MPSHM+ISWNLMSSYLV
Sbjct: 427  KFL-NVFYGKGPNRPVSSFDSDLLRFVARMPSHMRISWNLMSSYLV 471


>ref|XP_004138653.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Cucumis
            sativus]
          Length = 471

 Score =  613 bits (1582), Expect = e-173
 Identities = 308/466 (66%), Positives = 359/466 (77%)
 Frame = -2

Query: 1460 AVRWLSRVAPPAPVKAEPIIRVSNNIARLGEPKRAPKPRQLLSLPPFPNSGTEPLPGRKK 1281
            A R  SR++PP P  A+PIIRVSNNIA+LG PK  PK RQLLSLPPFP     PLPG K 
Sbjct: 12   ATRCYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPGY---PLPG-KN 67

Query: 1280 SAGSCGKQRRVTAISWVKHYFADIEEEAIRWHFNKGLVYIESSNQDNQAKENNFTCSLEK 1101
              G  G+   VTAI WVK+YF +I++  I+ HF KGLV +E        ++ N    + K
Sbjct: 68   QVGVSGESTHVTAIRWVKYYFDEIQDSQIQSHFRKGLVQVECPQLGGLDEKGNLK-PMRK 126

Query: 1100 IKHDHVMESGVRIHLPVSVGETKITKRYSTIPTATLNPNADEIEYMKRLVIHKDSAIFVL 921
            I+   +ME+G RIHLPVSV E K+ +R+ TIP+ TL PNADEI+Y++RLV +KDSAI VL
Sbjct: 127  IRSGEIMETGARIHLPVSVAEMKVARRFDTIPSGTLYPNADEIKYLQRLVKYKDSAIIVL 186

Query: 920  NKPPKVPVNGNLPVHNSMDILAAAALSNGSDQGPKLVHRLDRESSGLLLMGRTKESFTRL 741
            NKPPK+PV G LPVHNSMD LA AALS   D GPKLVHRLDRESSG+LLMGRTKES   L
Sbjct: 187  NKPPKLPVKGTLPVHNSMDALADAALSYDYDDGPKLVHRLDRESSGILLMGRTKESVDHL 246

Query: 740  HWLFTNVNLAKSSSEIWNNACEATMQRYWALVIGTPKEKEGVISAPLTKVVLNDGKGERV 561
             WLF+N+  AK + + W  AC AT Q+YWALVIG P+E+EGVISAPL+KV+L+DGK ERV
Sbjct: 247  QWLFSNIRNAKFTCKAWEEACNATYQKYWALVIGCPREREGVISAPLSKVLLDDGKTERV 306

Query: 560  ILAHPSGIDGSQEATTEYRVMGPTINGCSWIELCPLTSRKHQLRVHCAEALGTPIVGDYK 381
            +LA+ + I+ SQEA TEYRV+GPTINGCSWIELCP TSRKHQLR+HCAEALGTPIVGDYK
Sbjct: 307  VLANKASIEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTPIVGDYK 366

Query: 380  YGWFVQQRWKQMPRQDFEPSSGEPYKLRRPEGLAVQKGSVLSKVPLLHLHCREMVIPNIS 201
            YGWFV +RWKQMPR D EP SG PYKLRRPEGL VQKGSVLSKVPLLHLHCRE+V+PNI+
Sbjct: 367  YGWFVHRRWKQMPRVDVEPISGRPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIA 426

Query: 200  KFLGSSGEWLDETNEWAASQPDLLRFVASMPSHMKISWNLMSSYLV 63
            KFL +           ++   DLLRFVA MPSHM+ISWNLMSSYLV
Sbjct: 427  KFL-NVFYGKGPNRPVSSFDSDLLRFVARMPSHMRISWNLMSSYLV 471


>ref|XP_006436406.1| hypothetical protein CICLE_v10031422mg [Citrus clementina]
            gi|557538602|gb|ESR49646.1| hypothetical protein
            CICLE_v10031422mg [Citrus clementina]
          Length = 471

 Score =  612 bits (1578), Expect = e-172
 Identities = 311/470 (66%), Positives = 368/470 (78%), Gaps = 4/470 (0%)
 Frame = -2

Query: 1460 AVRWLSRVAPPAPVKAEPIIRVSNN-IARLGEPKRAPKPRQLLSLPPFPNSGTEPLPGRK 1284
            ++R  SR++PP P     +IRVS   +A LG PK  PKPRQLLSLPPFP      LPG+ 
Sbjct: 14   SIRHYSRISPPRPA----VIRVSEKKVAHLGPPKAGPKPRQLLSLPPFPGHN---LPGKH 66

Query: 1283 KSAGSCGKQRRVTAISWVKHYFADIEEEAIRWHFNKGLVYIESSNQDNQAKENNFTCSLE 1104
                  G+Q  VTA+SWVK+YF ++++  I+ HFNKGLV +E +N  +   E      + 
Sbjct: 67   -----WGRQCHVTAVSWVKYYFDEVQDSVIQSHFNKGLVQMECANMGDSFVEQGQMKPIR 121

Query: 1103 KIKHDHVMESGVRIHLPVSVGETKITKRYSTIPTATLNPNADEIEYMKRLVIHKDSAIFV 924
            KIK + VME G RI LPVS+ E +I+KRY TIP+ TLNPNADEI+Y++RLV ++DSAI V
Sbjct: 122  KIKTNEVMEPGARIFLPVSMVEGRISKRYDTIPSGTLNPNADEIDYLRRLVKYRDSAILV 181

Query: 923  LNKPPKVPVNGNLPVHNSMDILAAAALSNGSDQGPKLVHRLDRESSGLLLMGRTKESFTR 744
            LNKPPKVP+ G+LPVHNSMD LAAAALS   ++GPKLVHRLDRESSGLLLMGRTKES + 
Sbjct: 182  LNKPPKVPLKGHLPVHNSMDALAAAALSYDYNEGPKLVHRLDRESSGLLLMGRTKESVSL 241

Query: 743  LHWLFTNVNLAKSSSEIWNNACEATMQRYWALVIGTPKEKEGVISAPLTKVVLNDGKGER 564
            L WLF++VN +KS S+ WN+ACEA  QRYWALVIG+PKEK+G+I APL+KV+L+DGK ER
Sbjct: 242  LTWLFSDVNKSKSLSKAWNDACEAMYQRYWALVIGSPKEKQGIIHAPLSKVLLDDGKTER 301

Query: 563  VILAHPSGIDGSQEATTEYRVMGPTINGCSWIELCPLTSRKHQLRVHCAEALGTPIVGDY 384
            +ILA  SG++ SQEA TEYRV+GP INGCSWIEL PLT RKHQLRVHCAEALGTPIVGDY
Sbjct: 302  IILAQNSGLEASQEAVTEYRVLGPMINGCSWIELRPLTCRKHQLRVHCAEALGTPIVGDY 361

Query: 383  KYGWFVQQRWKQMPRQDFEPSSGEPYKLRRPEGLAVQKGSVLSKVPLLHLHCREMVIPNI 204
            KYGWFV +RWKQMPR D EP+SG+PYKLRRP+GL VQKGSVLSKVPLLHLHCRE+V+PNI
Sbjct: 362  KYGWFVHRRWKQMPRVDIEPTSGKPYKLRRPDGLDVQKGSVLSKVPLLHLHCRELVLPNI 421

Query: 203  SKF---LGSSGEWLDETNEWAASQPDLLRFVASMPSHMKISWNLMSSYLV 63
            +KF   L    + L  T       PDLLRFVASMPSHMKISWNLMSSYLV
Sbjct: 422  AKFRNVLNQKSDNLFPTLSSKPDGPDLLRFVASMPSHMKISWNLMSSYLV 471


>ref|XP_006385075.1| hypothetical protein POPTR_0004s23670g [Populus trichocarpa]
            gi|550341843|gb|ERP62872.1| hypothetical protein
            POPTR_0004s23670g [Populus trichocarpa]
          Length = 462

 Score =  609 bits (1571), Expect = e-172
 Identities = 309/471 (65%), Positives = 367/471 (77%), Gaps = 1/471 (0%)
 Frame = -2

Query: 1472 VIFEAVRWLSRVAPPAPVKAEPIIRVS-NNIARLGEPKRAPKPRQLLSLPPFPNSGTEPL 1296
            ++   VR  SRVAP        ++RV+  N+A+LG PK  PKPRQLLSLPPFP     PL
Sbjct: 7    LVSSGVRLYSRVAPQ-------VVRVTAKNVAKLGSPKEGPKPRQLLSLPPFPGF---PL 56

Query: 1295 PGRKKSAGSCGKQRRVTAISWVKHYFADIEEEAIRWHFNKGLVYIESSNQDNQAKENNFT 1116
            PG KKS  +C     VTAISWVK+YF +I++  I+ HFNK LV IE  +  +  +     
Sbjct: 57   PG-KKSLNAC----HVTAISWVKYYFDEIQDSVIQSHFNKSLVQIECPSSSDSVEMEGLG 111

Query: 1115 CSLEKIKHDHVMESGVRIHLPVSVGETKITKRYSTIPTATLNPNADEIEYMKRLVIHKDS 936
              + KIK   VME G RIH+PVSV ET I+KR+ TIP+ TL PNADEIEY++RLV +KDS
Sbjct: 112  KPMRKIKPSDVMEVGARIHIPVSVAETAISKRFDTIPSGTLYPNADEIEYLQRLVKYKDS 171

Query: 935  AIFVLNKPPKVPVNGNLPVHNSMDILAAAALSNGSDQGPKLVHRLDRESSGLLLMGRTKE 756
            A+ VLNKPPKVPV GN+P+HNSMD LAAAALS G D+GPKLVHRLDRESSGLLLMGRTKE
Sbjct: 172  ALLVLNKPPKVPVKGNMPIHNSMDALAAAALSYGYDEGPKLVHRLDRESSGLLLMGRTKE 231

Query: 755  SFTRLHWLFTNVNLAKSSSEIWNNACEATMQRYWALVIGTPKEKEGVISAPLTKVVLNDG 576
            S   L  LF+ +N A+S    WN+ACEAT QRYWALVIG+PK+KEG+ISA L+KV+L+DG
Sbjct: 232  SIAHLQLLFSYINKAQSKCHAWNDACEATYQRYWALVIGSPKDKEGLISARLSKVLLDDG 291

Query: 575  KGERVILAHPSGIDGSQEATTEYRVMGPTINGCSWIELCPLTSRKHQLRVHCAEALGTPI 396
            K ERV+LA  S ++ S++A TEYRV+GPTINGCSWIEL PLTSRKHQLRVHCAEALGTPI
Sbjct: 292  KTERVVLAQHSSLEPSRDAVTEYRVLGPTINGCSWIELRPLTSRKHQLRVHCAEALGTPI 351

Query: 395  VGDYKYGWFVQQRWKQMPRQDFEPSSGEPYKLRRPEGLAVQKGSVLSKVPLLHLHCREMV 216
            VGDYKYGWFV +RWKQMPR D EPSSG+PYKLR PEG+ +QKGSVL+KVPLLHLHCRE+V
Sbjct: 352  VGDYKYGWFVHRRWKQMPRVDIEPSSGKPYKLRWPEGVDIQKGSVLAKVPLLHLHCRELV 411

Query: 215  IPNISKFLGSSGEWLDETNEWAASQPDLLRFVASMPSHMKISWNLMSSYLV 63
            +PNI+KFL       +  +   +++PDLLRFVASMPSHMKISWNLMSS+LV
Sbjct: 412  LPNIAKFLDVLDGKSENVHPALSTRPDLLRFVASMPSHMKISWNLMSSFLV 462


>ref|XP_006389943.1| hypothetical protein EUTSA_v10018480mg [Eutrema salsugineum]
            gi|557086377|gb|ESQ27229.1| hypothetical protein
            EUTSA_v10018480mg [Eutrema salsugineum]
          Length = 478

 Score =  600 bits (1547), Expect = e-169
 Identities = 300/466 (64%), Positives = 366/466 (78%), Gaps = 2/466 (0%)
 Frame = -2

Query: 1454 RWLSRVAPPAPVKAEPIIRVSNNIARLGEPKRAPKPRQLLSLPPFPNSGTEPLPGRKKSA 1275
            R  SRVAPP       +IRV+NNIA+LG PK+ P PRQL+SLPPFP     PLPG+    
Sbjct: 23   RRYSRVAPPPST----VIRVTNNIAQLGPPKKGPLPRQLMSLPPFPG---HPLPGKNAGV 75

Query: 1274 GSCGKQRRVTAISWVKHYFADIEEEAIRWHFNKGLVYIE-SSNQDNQAKENNFTCSLEKI 1098
               G    VTAISWVK+Y  +I ++AI+ HF KGLV +E    +D   ++ +    ++K+
Sbjct: 76   DEDG---HVTAISWVKYYLEEIHDKAIQSHFTKGLVQMEFRGRRDASREKQDGVRPIKKV 132

Query: 1097 KHDHVMESGVRIHLPVSVGETKITKRYSTIPTATLNPNADEIEYMKRLVIHKDSAIFVLN 918
            KH+ VM+ G +I LPVS+ ET+I+KRY TIP+ TL PNADEI Y++RLV  KDSAI VLN
Sbjct: 133  KHNEVMQIGDKIWLPVSIAETRISKRYDTIPSGTLYPNADEIAYLQRLVRFKDSAIIVLN 192

Query: 917  KPPKVPVNGNLPVHNSMDILAAAALSNGSDQGPKLVHRLDRESSGLLLMGRTKESFTRLH 738
            KPPK+PV GN+P+HNSMD LAAAALS G D+GP+L+HRLDRE+SGLL+MGRTKES   LH
Sbjct: 193  KPPKLPVKGNVPIHNSMDALAAAALSFGKDEGPRLLHRLDRETSGLLVMGRTKESIDHLH 252

Query: 737  WLFTNVNLAKSSSEIWNNACEATMQRYWALVIGTPKEKEGVISAPLTKVVLNDGKGERVI 558
             +F++     S  + WN ACEA  Q+YWALVIG+PK+KEGVISAP++KV+L+DGK +RV+
Sbjct: 253  SVFSDFKGRDSRCKAWNKACEAMYQQYWALVIGSPKDKEGVISAPISKVLLDDGKTDRVV 312

Query: 557  LAHPSGIDGSQEATTEYRVMGPTINGCSWIELCPLTSRKHQLRVHCAEALGTPIVGDYKY 378
            LA  SG + SQEA TEYRV+GP INGCSW+EL PLTSRKHQLRVHCAEALGTPIVGDYKY
Sbjct: 313  LARGSGFEASQEAITEYRVLGPMINGCSWLELRPLTSRKHQLRVHCAEALGTPIVGDYKY 372

Query: 377  GWFVQQRWKQMPRQDFEPSSGEPYKLRRPEGLAVQKGSVLSKVPLLHLHCREMVIPNISK 198
            GWFV ++WKQMP+ D EP+SG+PYKLRRPEGL +QKGSVLSKVPLLHLHCREMV+PNI+K
Sbjct: 373  GWFVHKKWKQMPQVDIEPTSGKPYKLRRPEGLDIQKGSVLSKVPLLHLHCREMVLPNIAK 432

Query: 197  FLG-SSGEWLDETNEWAASQPDLLRFVASMPSHMKISWNLMSSYLV 63
            FL   + + +D  +    S+PDLLRFVASMPSHMKISWN+MSSYLV
Sbjct: 433  FLHVLNNQEIDSLHPGIISKPDLLRFVASMPSHMKISWNIMSSYLV 478


>ref|XP_004300876.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Fragaria
            vesca subsp. vesca]
          Length = 469

 Score =  600 bits (1546), Expect = e-169
 Identities = 302/468 (64%), Positives = 364/468 (77%), Gaps = 2/468 (0%)
 Frame = -2

Query: 1460 AVRWLSRVAPPAPVKAEP--IIRVSNNIARLGEPKRAPKPRQLLSLPPFPNSGTEPLPGR 1287
            + R  S  +PP P  A P  +IRVSN++A+LG PK  PKPRQLLSLPPFP      LPG+
Sbjct: 14   STRQYSSTSPPPPASAAPPPLIRVSNHVAKLGPPKAGPKPRQLLSLPPFPAG--RHLPGK 71

Query: 1286 KKSAGSCGKQRRVTAISWVKHYFADIEEEAIRWHFNKGLVYIESSNQDNQAKENNFTCSL 1107
            K      G    VTA+SW+++YF +I++ AIR HFNKGLV +E         E++    +
Sbjct: 72   KSYHD--GAVSHVTAVSWLRYYFHEIDDAAIRSHFNKGLVQMEC--------ESSIGKHM 121

Query: 1106 EKIKHDHVMESGVRIHLPVSVGETKITKRYSTIPTATLNPNADEIEYMKRLVIHKDSAIF 927
             KI+   VME G R+++ VS+ E+K+++R+  IP+ TL PNADEI+Y++RLV +KDSAI 
Sbjct: 122  RKIRPSEVMEEGARVYVAVSIAESKVSRRFDCIPSETLYPNADEIDYLQRLVKYKDSAII 181

Query: 926  VLNKPPKVPVNGNLPVHNSMDILAAAALSNGSDQGPKLVHRLDRESSGLLLMGRTKESFT 747
            VLNKPPK+PV GN+PVHNSMD LAAAALS   D+GPKLVHRLDRESSG+LLMGRTKES  
Sbjct: 182  VLNKPPKLPVKGNVPVHNSMDALAAAALSYDYDEGPKLVHRLDRESSGILLMGRTKESLY 241

Query: 746  RLHWLFTNVNLAKSSSEIWNNACEATMQRYWALVIGTPKEKEGVISAPLTKVVLNDGKGE 567
             L  L+T++N+ KSS   WN+AC A  QRYWALVIG+PKEKEG+I APLTKV+L+DGK E
Sbjct: 242  LLQSLYTDINVGKSSCRAWNDACRAKCQRYWALVIGSPKEKEGLICAPLTKVLLDDGKTE 301

Query: 566  RVILAHPSGIDGSQEATTEYRVMGPTINGCSWIELCPLTSRKHQLRVHCAEALGTPIVGD 387
            RVILAH SG++ SQ A T+YRV+GPTINGCSWIEL PLTSRKHQLRVHCAEALGTPIVGD
Sbjct: 302  RVILAHQSGLEASQPALTQYRVLGPTINGCSWIELQPLTSRKHQLRVHCAEALGTPIVGD 361

Query: 386  YKYGWFVQQRWKQMPRQDFEPSSGEPYKLRRPEGLAVQKGSVLSKVPLLHLHCREMVIPN 207
            YKYGWFV +RWKQMP  D EP++G  YKLRRP GL VQKGSV+SKVPLLHLHCRE+V+PN
Sbjct: 362  YKYGWFVHRRWKQMPHIDIEPATGLQYKLRRPAGLDVQKGSVVSKVPLLHLHCRELVLPN 421

Query: 206  ISKFLGSSGEWLDETNEWAASQPDLLRFVASMPSHMKISWNLMSSYLV 63
            I+KFL    + LD      +S+PD+LRFVASMP+HMKISWNLMSSYLV
Sbjct: 422  IAKFLCLLDQKLDNRYTVDSSKPDVLRFVASMPTHMKISWNLMSSYLV 469