BLASTX nr result
ID: Zingiber23_contig00036441
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00036441
(555 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268526.2| PREDICTED: pentatricopeptide repeat-containi... 125 7e-27
ref|XP_006358268.1| PREDICTED: pentatricopeptide repeat-containi... 123 3e-26
gb|EOY22910.1| Tetratricopeptide repeat-like superfamily protein... 121 1e-25
ref|XP_004160885.1| PREDICTED: pentatricopeptide repeat-containi... 121 1e-25
ref|XP_004148164.1| PREDICTED: pentatricopeptide repeat-containi... 121 1e-25
ref|XP_002518060.1| pentatricopeptide repeat-containing protein,... 117 2e-24
ref|XP_004235420.1| PREDICTED: pentatricopeptide repeat-containi... 114 1e-23
ref|XP_006421694.1| hypothetical protein CICLE_v10004237mg [Citr... 110 3e-22
ref|XP_006490098.1| PREDICTED: pentatricopeptide repeat-containi... 109 5e-22
ref|XP_006384788.1| hypothetical protein POPTR_0004s21110g [Popu... 107 2e-21
ref|XP_002328242.1| predicted protein [Populus trichocarpa] 107 2e-21
ref|XP_003571953.1| PREDICTED: pentatricopeptide repeat-containi... 104 2e-20
ref|XP_006858678.1| hypothetical protein AMTR_s00066p00081840 [A... 102 6e-20
ref|XP_006836040.1| hypothetical protein AMTR_s00114p00044440 [A... 102 8e-20
ref|XP_006858679.1| hypothetical protein AMTR_s00066p00082400 [A... 101 1e-19
emb|CBI21970.3| unnamed protein product [Vitis vinifera] 96 7e-18
gb|ACU25596.1| pentatricopeptide repeat-containing protein [Stac... 94 2e-17
gb|ACU25595.1| pentatricopeptide repeat-containing protein [Stac... 94 2e-17
ref|XP_002312829.1| pentatricopeptide repeat-containing family p... 94 2e-17
ref|XP_006847029.1| hypothetical protein AMTR_s00017p00176770 [A... 94 2e-17
>ref|XP_002268526.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g62370-like [Vitis vinifera]
Length = 1101
Score = 125 bits (314), Expect = 7e-27
Identities = 74/183 (40%), Positives = 105/183 (57%), Gaps = 3/183 (1%)
Frame = +3
Query: 12 YGRILRSLVSSRQFLKAKALFAHST--GGELPEDSSVLDAMVECFCKLGKLVDSKPLLDH 185
YG +LR LV S + A+A++ G +P DS L++MV C+C LGKL ++ D
Sbjct: 95 YGVLLRKLVGSGEHRFAEAVYRDYVIARGIIP-DSETLNSMVICYCNLGKLEEAMAHFDR 153
Query: 186 MIKIRSLPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGH 365
+ ++ S P K A+LR LCA E+ LEA D FV + G+ + +N LI GLC KGH
Sbjct: 154 LFEVDSFPCKPACNAMLRELCARERVLEAFDYFVRINDVGILMGLWCFNRLIDGLCDKGH 213
Query: 366 FVQAHHLLDKMVSR-GLSPSSQLCKTLFYGLCKGGDIVESEHVCRVMESHGFHFDRTMFS 542
+A ++ D M R GL + L KTLFYGLC+ + E+E MES G D+ M++
Sbjct: 214 VDEAFYMFDTMRERTGLPATIHLYKTLFYGLCRQERVEEAELFVGEMESEGHFIDKMMYT 273
Query: 543 TLI 551
+LI
Sbjct: 274 SLI 276
Score = 71.2 bits (173), Expect = 2e-10
Identities = 42/142 (29%), Positives = 71/142 (50%)
Frame = +3
Query: 129 VECFCKLGKLVDSKPLLDHMIKIRSLPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAGV 308
+ C GK + +D M+ + P TY +L++ L E +A L LM G+
Sbjct: 486 ISALCAAGKTDAALLFMDKMVSLGCRPLLSTYNSLIKCLFQERLVEDAKSLIDLMQENGI 545
Query: 309 FPDMSGYNSLIYGLCSKGHFVQAHHLLDKMVSRGLSPSSQLCKTLFYGLCKGGDIVESEH 488
PD++ Y +++ C+ G A LLD+M RGL PS + ++ L + I+E+E+
Sbjct: 546 VPDLATYLIMVHEHCNHGDLASAFGLLDQMNERGLKPSVAIYDSIIGCLSRRKRILEAEN 605
Query: 489 VCRVMESHGFHFDRTMFSTLIS 554
V ++M G D ++ T+IS
Sbjct: 606 VFKMMLEAGVDPDAIIYVTMIS 627
Score = 70.5 bits (171), Expect = 3e-10
Identities = 51/181 (28%), Positives = 80/181 (44%)
Frame = +3
Query: 12 YGRILRSLVSSRQFLKAKALFAHSTGGELPEDSSVLDAMVECFCKLGKLVDSKPLLDHMI 191
Y +++ L R AK+L + D + MV C G L + LLD M
Sbjct: 517 YNSLIKCLFQERLVEDAKSLIDLMQENGIVPDLATYLIMVHEHCNHGDLASAFGLLDQMN 576
Query: 192 KIRSLPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFV 371
+ PS Y +++ L ++ LEA ++F +M AGV PD Y ++I G +
Sbjct: 577 ERGLKPSVAIYDSIIGCLSRRKRILEAENVFKMMLEAGVDPDAIIYVTMISGYSKNRRAI 636
Query: 372 QAHHLLDKMVSRGLSPSSQLCKTLFYGLCKGGDIVESEHVCRVMESHGFHFDRTMFSTLI 551
+A L DKM+ G PSS + GL K I + M GF + ++++LI
Sbjct: 637 EARQLFDKMIEHGFQPSSHSYTAVISGLVKENMIDKGCSYLSDMLKDGFVPNTVLYTSLI 696
Query: 552 S 554
+
Sbjct: 697 N 697
Score = 55.8 bits (133), Expect = 7e-06
Identities = 41/149 (27%), Positives = 65/149 (43%)
Frame = +3
Query: 60 AKALFAHSTGGELPEDSSVLDAMVECFCKLGKLVDSKPLLDHMIKIRSLPSKRTYTALLR 239
A LF L D +A+++ CK G+L+D+ + M K P+K +Y LL+
Sbjct: 859 AIGLFNKMNADGLAPDGITYNALIKGLCKAGRLLDALSVSHTMHKRGLFPNKSSYEKLLK 918
Query: 240 LLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFVQAHHLLDKMVSRGLSP 419
LCA + A +F M P N L+ LC + + +AH + D M+ + P
Sbjct: 919 CLCASHLGVHAFKIFEEMLSHDYVPCWYNCNWLLCILCEEHRWHEAHIVFDVMLKQRKYP 978
Query: 420 SSQLCKTLFYGLCKGGDIVESEHVCRVME 506
+L K L C + E++ ME
Sbjct: 979 -DELTKRLLVEACNKKIFMIEENIWGGME 1006
>ref|XP_006358268.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g62370-like [Solanum tuberosum]
Length = 1067
Score = 123 bits (309), Expect = 3e-26
Identities = 66/182 (36%), Positives = 107/182 (58%), Gaps = 1/182 (0%)
Frame = +3
Query: 12 YGRILRSLVSSRQFLKAKALFAHSTGGE-LPEDSSVLDAMVECFCKLGKLVDSKPLLDHM 188
Y + R LV+SR+ LKA+AL+ + + SVL++M C+C LGKL ++K L D +
Sbjct: 99 YAFLFRQLVTSRETLKAEALYVDCILNRGIEPNHSVLNSMAICYCNLGKLEEAKLLFDKL 158
Query: 189 IKIRSLPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHF 368
+ + LP T L++ C +++ L+ D+FV + V S YN L+ GLC +G+
Sbjct: 159 VDKKLLPCSSTCNELIKGFCGQDRILDGFDVFVEAINSEVLLAFSCYNKLVDGLCFRGYL 218
Query: 369 VQAHHLLDKMVSRGLSPSSQLCKTLFYGLCKGGDIVESEHVCRVMESHGFHFDRTMFSTL 548
+A ++ D+M RG+ P+ L KTL L K G + E++ + MES+GF D+ M++TL
Sbjct: 219 DEALYVFDEMCDRGVPPTVHLFKTLILSLSKRGRVEEAQLLSMDMESYGFVLDKVMYTTL 278
Query: 549 IS 554
I+
Sbjct: 279 IN 280
Score = 69.3 bits (168), Expect = 6e-10
Identities = 46/154 (29%), Positives = 76/154 (49%)
Frame = +3
Query: 90 GELPEDSSVLDAMVECFCKLGKLVDSKPLLDHMIKIRSLPSKRTYTALLRLLCAEEKFLE 269
G++P ++ L MV +CK G + + +LD M + PS Y +++ L E++ E
Sbjct: 547 GQVPNQATFL-IMVNEYCKQGDIQSALEVLDQMEESGLKPSVAIYDSVIGCLGREKRIDE 605
Query: 270 ALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFVQAHHLLDKMVSRGLSPSSQLCKTLFY 449
AL +F M AG++PD + ++I L G +QAH L M+ G+ PS L
Sbjct: 606 ALGVFRRMLEAGIYPDKILFVTMINALSRNGQAIQAHELFITMLEDGVQPSHYAYTALIN 665
Query: 450 GLCKGGDIVESEHVCRVMESHGFHFDRTMFSTLI 551
GL K I + + M GF + ++++LI
Sbjct: 666 GLVKKNMIEKGCVYLKQMIEEGFMPNTVLYTSLI 699
>gb|EOY22910.1| Tetratricopeptide repeat-like superfamily protein, putative isoform
1 [Theobroma cacao] gi|508775655|gb|EOY22911.1|
Tetratricopeptide repeat-like superfamily protein,
putative isoform 1 [Theobroma cacao]
gi|508775656|gb|EOY22912.1| Tetratricopeptide
repeat-like superfamily protein, putative isoform 1
[Theobroma cacao]
Length = 1003
Score = 121 bits (304), Expect = 1e-25
Identities = 72/182 (39%), Positives = 110/182 (60%), Gaps = 2/182 (1%)
Frame = +3
Query: 12 YGRILRSLVSSRQFLKAKALFAHSTGGE-LPEDSSVLDAMVECFCKLGKLVDSKPLLDHM 188
+G +++ LV S A +L++ + + D ++++MV C CKLGKL ++ L D +
Sbjct: 96 FGALIKKLVRSGYPQLAYSLYSDNIIRRGINPDPFIVNSMVICLCKLGKLEEASTLFDRL 155
Query: 189 IKIRSLPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHF 368
+ S K + AL+R L A+E+FL+ D FV M+ GV YN LI GLC KG+
Sbjct: 156 LMNNS-SEKPAFNALVRELFAQERFLDVFDYFVAMSDIGVNLGCWYYNGLIDGLCQKGNL 214
Query: 369 VQAHHLLDKM-VSRGLSPSSQLCKTLFYGLCKGGDIVESEHVCRVMESHGFHFDRTMFST 545
+A + D M + GLSP+ L K+LFYGLCK G ++E+E + +ES GF+ DRTM+++
Sbjct: 215 EEAIQMFDLMRETAGLSPTLHLYKSLFYGLCKHGWVLEAEFLIGEIESQGFYVDRTMYTS 274
Query: 546 LI 551
LI
Sbjct: 275 LI 276
Score = 67.4 bits (163), Expect = 2e-09
Identities = 42/150 (28%), Positives = 66/150 (44%)
Frame = +3
Query: 12 YGRILRSLVSSRQFLKAKALFAHSTGGELPEDSSVLDAMVECFCKLGKLVDSKPLLDHMI 191
Y +++ L F AK+L + D + MV CK G L + +LD M
Sbjct: 513 YNSLVKCLSQEGLFEDAKSLVDLMQDRGIFPDQATYLIMVNEHCKHGDLASAFDILDQME 572
Query: 192 KIRSLPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFV 371
P Y ++ LC +++ EA D+F+ M +G PD Y ++I G G +
Sbjct: 573 DRGMKPGVAIYDCIIGSLCRQKRLFEAEDMFIRMLESGEDPDEIVYMTMINGYAKNGRLI 632
Query: 372 QAHHLLDKMVSRGLSPSSQLCKTLFYGLCK 461
+A L +KM+ + P+S L GL K
Sbjct: 633 EARQLFEKMIEDAIRPTSHSYTALISGLVK 662
Score = 63.2 bits (152), Expect = 4e-08
Identities = 37/134 (27%), Positives = 64/134 (47%)
Frame = +3
Query: 153 KLVDSKPLLDHMIKIRSLPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYN 332
KL + +D ++ + +P TY +L++ L E F +A L LM G+FPD + Y
Sbjct: 490 KLDTAVHFMDKLMNLGCMPLLFTYNSLVKCLSQEGLFEDAKSLVDLMQDRGIFPDQATYL 549
Query: 333 SLIYGLCSKGHFVQAHHLLDKMVSRGLSPSSQLCKTLFYGLCKGGDIVESEHVCRVMESH 512
++ C G A +LD+M RG+ P + + LC+ + E+E + M
Sbjct: 550 IMVNEHCKHGDLASAFDILDQMEDRGMKPGVAIYDCIIGSLCRQKRLFEAEDMFIRMLES 609
Query: 513 GFHFDRTMFSTLIS 554
G D ++ T+I+
Sbjct: 610 GEDPDEIVYMTMIN 623
Score = 58.9 bits (141), Expect = 8e-07
Identities = 38/134 (28%), Positives = 60/134 (44%)
Frame = +3
Query: 69 LFAHSTGGELPEDSSVLDAMVECFCKLGKLVDSKPLLDHMIKIRSLPSKRTYTALLRLLC 248
LF + D + +++ C+ G+L+++ LL M K +P K TY LL C
Sbjct: 857 LFNKMNADDCTPDKIAYNTLIKGLCQAGRLLEALSLLHAMHKRGLIPRKATYENLLAHFC 916
Query: 249 AEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFVQAHHLLDKMVSRGLSPSSQ 428
A + A +F M + V P YN L+ LC + +A+ + D M+ RG P
Sbjct: 917 ASYLCIPAFKIFEEMLASNVVPRPYSYNWLLCILCEQKKLREAYIVFDTMIQRGKYPLKS 976
Query: 429 LCKTLFYGLCKGGD 470
+ L L K G+
Sbjct: 977 TERLLAETLRKQGE 990
Score = 57.4 bits (137), Expect = 2e-06
Identities = 42/166 (25%), Positives = 73/166 (43%)
Frame = +3
Query: 12 YGRILRSLVSSRQFLKAKALFAHSTGGELPEDSSVLDAMVECFCKLGKLVDSKPLLDHMI 191
Y I+ SL ++ +A+ +F D V M+ + K G+L++++ L + MI
Sbjct: 583 YDCIIGSLCRQKRLFEAEDMFIRMLESGEDPDEIVYMTMINGYAKNGRLIEARQLFEKMI 642
Query: 192 KIRSLPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFV 371
+ P+ +YTAL+ L ++ + M G G+ P++ Y SLI KG F
Sbjct: 643 EDAIRPTSHSYTALISGLVKKDMTDKGCMYLDRMLGDGLVPNVVLYTSLINNFLRKGEFE 702
Query: 372 QAHHLLDKMVSRGLSPSSQLCKTLFYGLCKGGDIVESEHVCRVMES 509
A L+D M + L G+C+ +I + C + S
Sbjct: 703 FAFRLVDLMDRNQIEHDLITYIALVSGVCR--NITSRKRWCSIKRS 746
Score = 57.0 bits (136), Expect = 3e-06
Identities = 34/145 (23%), Positives = 63/145 (43%)
Frame = +3
Query: 120 DAMVECFCKLGKLVDSKPLLDHMIKIRSLPSKRTYTALLRLLCAEEKFLEALDLFVLMAG 299
+++V+C + G D+K L+D M P + TY ++ C A D+ M
Sbjct: 514 NSLVKCLSQEGLFEDAKSLVDLMQDRGIFPDQATYLIMVNEHCKHGDLASAFDILDQMED 573
Query: 300 AGVFPDMSGYNSLIYGLCSKGHFVQAHHLLDKMVSRGLSPSSQLCKTLFYGLCKGGDIVE 479
G+ P ++ Y+ +I LC + +A + +M+ G P + T+ G K G ++E
Sbjct: 574 RGMKPGVAIYDCIIGSLCRQKRLFEAEDMFIRMLESGEDPDEIVYMTMINGYAKNGRLIE 633
Query: 480 SEHVCRVMESHGFHFDRTMFSTLIS 554
+ + M ++ LIS
Sbjct: 634 ARQLFEKMIEDAIRPTSHSYTALIS 658
>ref|XP_004160885.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g62370-like [Cucumis sativus]
Length = 693
Score = 121 bits (304), Expect = 1e-25
Identities = 69/181 (38%), Positives = 105/181 (58%), Gaps = 1/181 (0%)
Frame = +3
Query: 12 YGRILRSLVSSRQFLKAKALFAHSTGGELPEDSSVLDAMVECFCKLGKLVDSKPLLDHMI 191
+G + R LV S+ L G D +LD+MV CFC+LGK ++ + ++
Sbjct: 84 HGLLCRQLVFSKPQLSEFLYNRKFVVGGAEPDVLLLDSMVSCFCRLGKFEEALSHFNRLL 143
Query: 192 KIRSLPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFV 371
+ +PSK ++ A+ R LCA+ + LEA + FV + GAG++ +N L+ GLC++G
Sbjct: 144 SLNYVPSKVSFNAIFRELCAQGRVLEAFNYFVRVNGAGIYLGCWCFNVLMDGLCNQGFMG 203
Query: 372 QAHHLLDKMVS-RGLSPSSQLCKTLFYGLCKGGDIVESEHVCRVMESHGFHFDRTMFSTL 548
+A L D M S G P+ L KTLFYGLCK G +VE+E + R ME + D+TM+++L
Sbjct: 204 EALELFDIMQSTNGYPPTLHLFKTLFYGLCKSGWLVEAELLIREMEFRSLYPDKTMYTSL 263
Query: 549 I 551
I
Sbjct: 264 I 264
Score = 70.1 bits (170), Expect = 3e-10
Identities = 48/181 (26%), Positives = 84/181 (46%)
Frame = +3
Query: 12 YGRILRSLVSSRQFLKAKALFAHSTGGELPEDSSVLDAMVECFCKLGKLVDSKPLLDHMI 191
Y ++R L R F A +L H L +++ +V +C+ G + + L M
Sbjct: 505 YNSLIRRLCKERLFEDAMSLIDHMKDYSLFPNTTTYLIIVNEYCRQGNVTAAYHTLRKMR 564
Query: 192 KIRSLPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFV 371
++ PS Y +++R L E++ EA +F +M AG+ PD Y ++I G G +
Sbjct: 565 QVGLKPSVAIYDSIIRCLSREKRICEAEVVFKMMLEAGMDPDKKFYLTMIKGYSKNGRIL 624
Query: 372 QAHHLLDKMVSRGLSPSSQLCKTLFYGLCKGGDIVESEHVCRVMESHGFHFDRTMFSTLI 551
+A L ++MV + PSS + L GL + M +GF + ++STL+
Sbjct: 625 EACELFEQMVENSIPPSSHIYTALIRGLGMKNMTDKGCLYLGKMSRNGFLPNVVLYSTLM 684
Query: 552 S 554
+
Sbjct: 685 N 685
Score = 65.5 bits (158), Expect = 8e-09
Identities = 39/142 (27%), Positives = 68/142 (47%)
Frame = +3
Query: 126 MVECFCKLGKLVDSKPLLDHMIKIRSLPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAG 305
++ C+ + L +M+ + P TY +L+R LC E F +A+ L M
Sbjct: 473 VISALCETENFCYALDYLHNMVSLGCKPLLFTYNSLIRRLCKERLFEDAMSLIDHMKDYS 532
Query: 306 VFPDMSGYNSLIYGLCSKGHFVQAHHLLDKMVSRGLSPSSQLCKTLFYGLCKGGDIVESE 485
+FP+ + Y ++ C +G+ A+H L KM GL PS + ++ L + I E+E
Sbjct: 533 LFPNTTTYLIIVNEYCRQGNVTAAYHTLRKMRQVGLKPSVAIYDSIIRCLSREKRICEAE 592
Query: 486 HVCRVMESHGFHFDRTMFSTLI 551
V ++M G D+ + T+I
Sbjct: 593 VVFKMMLEAGMDPDKKFYLTMI 614
Score = 55.5 bits (132), Expect = 9e-06
Identities = 45/181 (24%), Positives = 73/181 (40%), Gaps = 1/181 (0%)
Frame = +3
Query: 12 YGRILRSLVSSRQFLKAKALFAHSTGGELPEDSSVLDAMVECFCKLGKLVDSKPLLDHMI 191
+ I R L + + L+A F G + + +++ C G + ++ L D M
Sbjct: 154 FNAIFRELCAQGRVLEAFNYFVRVNGAGIYLGCWCFNVLMDGLCNQGFMGEALELFDIMQ 213
Query: 192 KIRSLP-SKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHF 368
P + + L LC +EA L M ++PD + Y SLI+G C
Sbjct: 214 STNGYPPTLHLFKTLFYGLCKSGWLVEAELLIREMEFRSLYPDKTMYTSLIHGYCRDRKM 273
Query: 369 VQAHHLLDKMVSRGLSPSSQLCKTLFYGLCKGGDIVESEHVCRVMESHGFHFDRTMFSTL 548
A L +MV G P + +L +G K G + + V ++ME G D F +
Sbjct: 274 KMAMQALFRMVKIGCKPDTFTLNSLIHGFVKLGLVEKGWLVYKLMEDWGIQPDVVTFHIM 333
Query: 549 I 551
I
Sbjct: 334 I 334
>ref|XP_004148164.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g62370-like [Cucumis sativus]
Length = 693
Score = 121 bits (304), Expect = 1e-25
Identities = 69/181 (38%), Positives = 105/181 (58%), Gaps = 1/181 (0%)
Frame = +3
Query: 12 YGRILRSLVSSRQFLKAKALFAHSTGGELPEDSSVLDAMVECFCKLGKLVDSKPLLDHMI 191
+G + R LV S+ L G D +LD+MV CFC+LGK ++ + ++
Sbjct: 84 HGLLCRQLVFSKPQLSEFLYNRKFVVGGAEPDVLLLDSMVSCFCRLGKFEEALSHFNRLL 143
Query: 192 KIRSLPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFV 371
+ +PSK ++ A+ R LCA+ + LEA + FV + GAG++ +N L+ GLC++G
Sbjct: 144 SLNYVPSKVSFNAIFRELCAQGRVLEAFNYFVRVNGAGIYLGCWCFNVLMDGLCNQGFMG 203
Query: 372 QAHHLLDKMVS-RGLSPSSQLCKTLFYGLCKGGDIVESEHVCRVMESHGFHFDRTMFSTL 548
+A L D M S G P+ L KTLFYGLCK G +VE+E + R ME + D+TM+++L
Sbjct: 204 EALELFDIMQSTNGYPPTLHLFKTLFYGLCKSGWLVEAELLIREMEFRSLYPDKTMYTSL 263
Query: 549 I 551
I
Sbjct: 264 I 264
Score = 71.2 bits (173), Expect = 2e-10
Identities = 48/181 (26%), Positives = 85/181 (46%)
Frame = +3
Query: 12 YGRILRSLVSSRQFLKAKALFAHSTGGELPEDSSVLDAMVECFCKLGKLVDSKPLLDHMI 191
Y ++R L R F A +L H L +++ +V +C+ G + + +L M
Sbjct: 505 YNSLIRRLCKERLFEDAMSLIDHMKDYSLFPNTTTYLIIVNEYCRQGNVTAAYHILRKMR 564
Query: 192 KIRSLPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFV 371
++ PS Y +++R L E++ EA +F +M AG+ PD Y ++I G G +
Sbjct: 565 QVGLKPSVAIYDSIIRCLSREKRICEAEVVFKMMLEAGMDPDKKFYLTMIKGYSKNGRIL 624
Query: 372 QAHHLLDKMVSRGLSPSSQLCKTLFYGLCKGGDIVESEHVCRVMESHGFHFDRTMFSTLI 551
+A L ++MV + PSS + L GL + M +GF + ++STL+
Sbjct: 625 EACELFEQMVENSIPPSSHIYTALIRGLGMKNMTDKGCLYLGKMSRNGFLPNVVLYSTLM 684
Query: 552 S 554
+
Sbjct: 685 N 685
Score = 66.6 bits (161), Expect = 4e-09
Identities = 39/142 (27%), Positives = 69/142 (48%)
Frame = +3
Query: 126 MVECFCKLGKLVDSKPLLDHMIKIRSLPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAG 305
++ C+ + L +M+ + P TY +L+R LC E F +A+ L M
Sbjct: 473 VISALCETENFCYALDYLHNMVSLGCKPLLFTYNSLIRRLCKERLFEDAMSLIDHMKDYS 532
Query: 306 VFPDMSGYNSLIYGLCSKGHFVQAHHLLDKMVSRGLSPSSQLCKTLFYGLCKGGDIVESE 485
+FP+ + Y ++ C +G+ A+H+L KM GL PS + ++ L + I E+E
Sbjct: 533 LFPNTTTYLIIVNEYCRQGNVTAAYHILRKMRQVGLKPSVAIYDSIIRCLSREKRICEAE 592
Query: 486 HVCRVMESHGFHFDRTMFSTLI 551
V ++M G D+ + T+I
Sbjct: 593 VVFKMMLEAGMDPDKKFYLTMI 614
Score = 55.5 bits (132), Expect = 9e-06
Identities = 45/181 (24%), Positives = 73/181 (40%), Gaps = 1/181 (0%)
Frame = +3
Query: 12 YGRILRSLVSSRQFLKAKALFAHSTGGELPEDSSVLDAMVECFCKLGKLVDSKPLLDHMI 191
+ I R L + + L+A F G + + +++ C G + ++ L D M
Sbjct: 154 FNAIFRELCAQGRVLEAFNYFVRVNGAGIYLGCWCFNVLMDGLCNQGFMGEALELFDIMQ 213
Query: 192 KIRSLP-SKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHF 368
P + + L LC +EA L M ++PD + Y SLI+G C
Sbjct: 214 STNGYPPTLHLFKTLFYGLCKSGWLVEAELLIREMEFRSLYPDKTMYTSLIHGYCRDRKM 273
Query: 369 VQAHHLLDKMVSRGLSPSSQLCKTLFYGLCKGGDIVESEHVCRVMESHGFHFDRTMFSTL 548
A L +MV G P + +L +G K G + + V ++ME G D F +
Sbjct: 274 KMAMQALFRMVKIGCKPDTFTLNSLIHGFVKLGLVEKGWLVYKLMEDWGIQPDVVTFHIM 333
Query: 549 I 551
I
Sbjct: 334 I 334
>ref|XP_002518060.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223542656|gb|EEF44193.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 402
Score = 117 bits (293), Expect = 2e-24
Identities = 68/182 (37%), Positives = 101/182 (55%), Gaps = 1/182 (0%)
Frame = +3
Query: 12 YGRILRSLVSSRQFLKAKALFAHSTGGELPEDSSVLDAMVECFCKLGKLVDSKPLLDHMI 191
Y +R LV + A ++ S + ++S+ ++M+ CF KLGKL +++ L D +I
Sbjct: 97 YAAFVRKLVDLGEPNFAYTVYCESINRSIQPNASITNSMIICFVKLGKLEEARLLFDKLI 156
Query: 192 KIRSLPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFV 371
+P +LR LC +E FLEA D FV + A + M YN LI GLCSKG
Sbjct: 157 GNGCVPCNAACNVILRELCGQEMFLEAFDCFVRIRDAKMQLGMWFYNVLIDGLCSKGCVG 216
Query: 372 QAHHLLDKMVSR-GLSPSSQLCKTLFYGLCKGGDIVESEHVCRVMESHGFHFDRTMFSTL 548
A + + M R P+ K+LFYGLCK G +VE+E +C ME+ GF D+ M++TL
Sbjct: 217 DAMEVFNLMPKRTSFLPTLHNYKSLFYGLCKRGWVVEAESICGKMEARGFFVDKVMYTTL 276
Query: 549 IS 554
++
Sbjct: 277 MN 278
>ref|XP_004235420.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g62370-like [Solanum lycopersicum]
Length = 1081
Score = 114 bits (286), Expect = 1e-23
Identities = 61/182 (33%), Positives = 106/182 (58%), Gaps = 1/182 (0%)
Frame = +3
Query: 12 YGRILRSLVSSRQFLKAKALFAHSTGGE-LPEDSSVLDAMVECFCKLGKLVDSKPLLDHM 188
Y ++R LV+S + LKA+AL+ + + S+L++M C+C LGKL ++K L D +
Sbjct: 99 YAFLIRQLVTSGETLKAEALYVDCILNRGIEPNHSLLNSMAICYCNLGKLEEAKLLFDKL 158
Query: 189 IKIRSLPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHF 368
+ ++ +P T L++ C +++ L+ D+FV + V S YN L+ LC +G+
Sbjct: 159 VDMKLMPCSSTCNELIKGFCGQDRILDGFDVFVEAINSEVLLAFSCYNKLVDILCFQGYL 218
Query: 369 VQAHHLLDKMVSRGLSPSSQLCKTLFYGLCKGGDIVESEHVCRVMESHGFHFDRTMFSTL 548
+A ++ D+M RG+ P+ L K L L K G + E++ + MES+GF D+ M++TL
Sbjct: 219 DEALYVFDEMCDRGVPPTVHLFKRLILSLSKRGRVEEAQLLSMDMESYGFVLDKVMYTTL 278
Query: 549 IS 554
I+
Sbjct: 279 IN 280
Score = 67.8 bits (164), Expect = 2e-09
Identities = 44/154 (28%), Positives = 76/154 (49%)
Frame = +3
Query: 90 GELPEDSSVLDAMVECFCKLGKLVDSKPLLDHMIKIRSLPSKRTYTALLRLLCAEEKFLE 269
G++P ++ L MV +CK G + + +LD M + PS Y +++ L +++ E
Sbjct: 547 GQVPNQATFL-IMVNEYCKQGDIQSALEVLDQMEESGLKPSVAIYDSVIGCLGRKKRIDE 605
Query: 270 ALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFVQAHHLLDKMVSRGLSPSSQLCKTLFY 449
AL +F M G++PD + + ++I L G +QAH L M+ G+ PS L
Sbjct: 606 ALGVFRRMLETGIYPDKTLFVTMINALSRNGRAIQAHELFVTMLEDGVQPSHNAYTALIN 665
Query: 450 GLCKGGDIVESEHVCRVMESHGFHFDRTMFSTLI 551
GL K I + + M GF + ++++LI
Sbjct: 666 GLVKKNMIEKGCVYLKQMIEEGFMPNTVLYTSLI 699
>ref|XP_006421694.1| hypothetical protein CICLE_v10004237mg [Citrus clementina]
gi|557523567|gb|ESR34934.1| hypothetical protein
CICLE_v10004237mg [Citrus clementina]
Length = 1004
Score = 110 bits (274), Expect = 3e-22
Identities = 66/186 (35%), Positives = 103/186 (55%), Gaps = 2/186 (1%)
Frame = +3
Query: 3 SPEYGRILRSLVSSRQFLKAKALFAHS-TGGELPEDSSVLDAMVECFCKLGKLVDSKPLL 179
S Y +++ L+ Q A L+ + + D ++L++++ +CKLG + D+
Sbjct: 99 SGSYSALMKKLIKFGQSQSALLLYQNDFVALGIDPDPAILNSVIIGYCKLGNIEDALRHF 158
Query: 180 DHMIKIRSLPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSK 359
D +I +P K ++LR L AEEKFLEA D F+ + AGV + YN LI GLC K
Sbjct: 159 DRLISKNIVPIKLACVSILRGLFAEEKFLEAFDYFIKICNAGVDLNCWSYNVLIDGLCYK 218
Query: 360 GHFVQAHHLLDKM-VSRGLSPSSQLCKTLFYGLCKGGDIVESEHVCRVMESHGFHFDRTM 536
G + +++ M +GL P+ K+LFY LCK VE+E R MES GF+ D+ M
Sbjct: 219 GFLDEVLEVVNIMRKKKGLVPALHPYKSLFYALCKNRRTVEAESFAREMESQGFYVDKLM 278
Query: 537 FSTLIS 554
+++LI+
Sbjct: 279 YTSLIN 284
Score = 63.9 bits (154), Expect = 2e-08
Identities = 45/143 (31%), Positives = 67/143 (46%)
Frame = +3
Query: 126 MVECFCKLGKLVDSKPLLDHMIKIRSLPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAG 305
MVE CK G L + +LD M PS Y A++ LC E++ LEA D+F M AG
Sbjct: 562 MVEGNCKWGNLDSALDILDQMEVRGPKPSVAIYDAIIGHLCKEKRILEAEDMFKRMLKAG 621
Query: 306 VFPDMSGYNSLIYGLCSKGHFVQAHHLLDKMVSRGLSPSSQLCKTLFYGLCKGGDIVESE 485
+ PD + ++I G ++A L +KM + P S L GL K G +
Sbjct: 622 IDPDEVFFTTMINGYLQNRKPIEACQLFEKMKENSVQPGSYPYTALISGLVKKGMVDLGC 681
Query: 486 HVCRVMESHGFHFDRTMFSTLIS 554
M + GF + +++ LI+
Sbjct: 682 MYLDRMLADGFVPNVVLYTALIN 704
Score = 61.2 bits (147), Expect = 2e-07
Identities = 43/150 (28%), Positives = 66/150 (44%), Gaps = 1/150 (0%)
Frame = +3
Query: 21 ILRSLVSSRQFLKAKALFAHSTGGELPEDSSVLDAMVECFCKLGKLVDSKPLLDHMIKIR 200
ILR L + +FL+A F + + + +++ C G L + +++ M K +
Sbjct: 176 ILRGLFAEEKFLEAFDYFIKICNAGVDLNCWSYNVLIDGLCYKGFLDEVLEVVNIMRKKK 235
Query: 201 SL-PSKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFVQA 377
L P+ Y +L LC + +EA M G + D Y SLI G CS + A
Sbjct: 236 GLVPALHPYKSLFYALCKNRRTVEAESFAREMESQGFYVDKLMYTSLINGYCSNRNMKMA 295
Query: 378 HHLLDKMVSRGLSPSSQLCKTLFYGLCKGG 467
L +M+ G P S C TL +G K G
Sbjct: 296 MRLFFRMLKTGCEPDSYTCNTLIHGFFKMG 325
>ref|XP_006490098.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g62370-like isoform X1 [Citrus sinensis]
gi|568873973|ref|XP_006490099.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g62370-like isoform X2 [Citrus sinensis]
gi|568873975|ref|XP_006490100.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g62370-like isoform X3 [Citrus sinensis]
Length = 1004
Score = 109 bits (272), Expect = 5e-22
Identities = 66/186 (35%), Positives = 103/186 (55%), Gaps = 2/186 (1%)
Frame = +3
Query: 3 SPEYGRILRSLVSSRQFLKAKALFAHS-TGGELPEDSSVLDAMVECFCKLGKLVDSKPLL 179
S Y +++ L+ Q A L+ + + D ++L++++ +CKLG + D+
Sbjct: 99 SGSYSALMKKLIKFGQSQSALLLYQNDFVALGIDPDPAILNSVIIGYCKLGNIEDALRHF 158
Query: 180 DHMIKIRSLPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSK 359
D +I +P K ++LR L AEEKFLEA D F+ + AGV + YN LI GLC K
Sbjct: 159 DRLISKNIVPIKLACVSILRGLFAEEKFLEAFDYFIKICNAGVDLNCWSYNVLIDGLCYK 218
Query: 360 GHFVQAHHLLDKM-VSRGLSPSSQLCKTLFYGLCKGGDIVESEHVCRVMESHGFHFDRTM 536
G + +++ M +GL P+ K+LFY LCK VE+E R MES GF+ D+ M
Sbjct: 219 GFLDEVLEVVNIMRKKKGLVPALHPYKSLFYALCKNIRTVEAESFAREMESQGFYVDKLM 278
Query: 537 FSTLIS 554
+++LI+
Sbjct: 279 YTSLIN 284
Score = 63.9 bits (154), Expect = 2e-08
Identities = 45/143 (31%), Positives = 67/143 (46%)
Frame = +3
Query: 126 MVECFCKLGKLVDSKPLLDHMIKIRSLPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAG 305
MVE CK G L + +LD M PS Y A++ LC E++ LEA D+F M AG
Sbjct: 562 MVEGNCKWGNLDSALDILDQMEVRGPKPSVAIYDAIIGHLCKEKRILEAEDMFKRMLKAG 621
Query: 306 VFPDMSGYNSLIYGLCSKGHFVQAHHLLDKMVSRGLSPSSQLCKTLFYGLCKGGDIVESE 485
+ PD + ++I G ++A L +KM + P S L GL K G +
Sbjct: 622 IDPDEVFFTTMINGYLQNRKPIEACQLFEKMKENSVQPGSYPYTALISGLVKKGMVDLGC 681
Query: 486 HVCRVMESHGFHFDRTMFSTLIS 554
M + GF + +++ LI+
Sbjct: 682 MYLDRMLADGFVPNVVLYTALIN 704
Score = 60.1 bits (144), Expect = 3e-07
Identities = 43/150 (28%), Positives = 66/150 (44%), Gaps = 1/150 (0%)
Frame = +3
Query: 21 ILRSLVSSRQFLKAKALFAHSTGGELPEDSSVLDAMVECFCKLGKLVDSKPLLDHMIKIR 200
ILR L + +FL+A F + + + +++ C G L + +++ M K +
Sbjct: 176 ILRGLFAEEKFLEAFDYFIKICNAGVDLNCWSYNVLIDGLCYKGFLDEVLEVVNIMRKKK 235
Query: 201 SL-PSKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFVQA 377
L P+ Y +L LC + +EA M G + D Y SLI G CS + A
Sbjct: 236 GLVPALHPYKSLFYALCKNIRTVEAESFAREMESQGFYVDKLMYTSLINGYCSNRNMKMA 295
Query: 378 HHLLDKMVSRGLSPSSQLCKTLFYGLCKGG 467
L +M+ G P S C TL +G K G
Sbjct: 296 MRLFFRMLKTGCEPDSYTCNTLIHGFFKMG 325
>ref|XP_006384788.1| hypothetical protein POPTR_0004s21110g [Populus trichocarpa]
gi|550341556|gb|ERP62585.1| hypothetical protein
POPTR_0004s21110g [Populus trichocarpa]
Length = 1025
Score = 107 bits (266), Expect = 2e-21
Identities = 66/183 (36%), Positives = 103/183 (56%), Gaps = 3/183 (1%)
Frame = +3
Query: 15 GRILRSLVSSRQFLKAKALFAHSTGGE-LPEDSSVLDAMVECFCKLGKLVDSKPLLD-HM 188
G ++R LV L A+ + + DS++++++V C KLGKL D+ L D H+
Sbjct: 94 GELIRKLVDLGHPLSAREFYHDLVVARGIEPDSNIVNSLVICLAKLGKLDDAVKLFDRHI 153
Query: 189 IKIRSLPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHF 368
L S + +L+ ++KF+EA D FV ++ A V M YN LI GLC +G+
Sbjct: 154 GSGDCLVSNAACSTILKGFYEQDKFVEAFDYFVRISDANVKLGMWAYNVLIDGLCQQGYV 213
Query: 369 VQAHHLLDKMVS-RGLSPSSQLCKTLFYGLCKGGDIVESEHVCRVMESHGFHFDRTMFST 545
+A +LD M GL P+ + KTLFYGLCK G +E+E + ME+ GF D+ M+++
Sbjct: 214 GEAIEVLDIMCRITGLPPTLHMLKTLFYGLCKRGWSIEAEWIFEEMEAQGFFVDKVMYTS 273
Query: 546 LIS 554
L++
Sbjct: 274 LMN 276
>ref|XP_002328242.1| predicted protein [Populus trichocarpa]
Length = 893
Score = 107 bits (266), Expect = 2e-21
Identities = 66/183 (36%), Positives = 103/183 (56%), Gaps = 3/183 (1%)
Frame = +3
Query: 15 GRILRSLVSSRQFLKAKALFAHSTGGE-LPEDSSVLDAMVECFCKLGKLVDSKPLLD-HM 188
G ++R LV L A+ + + DS++++++V C KLGKL D+ L D H+
Sbjct: 94 GELIRKLVDLGHPLSAREFYHDLVVARGIEPDSNIVNSLVICLAKLGKLDDAVKLFDRHI 153
Query: 189 IKIRSLPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHF 368
L S + +L+ ++KF+EA D FV ++ A V M YN LI GLC +G+
Sbjct: 154 GSGDCLVSNAACSTILKGFYEQDKFVEAFDYFVRISDANVKLGMWAYNVLIDGLCQQGYV 213
Query: 369 VQAHHLLDKMVS-RGLSPSSQLCKTLFYGLCKGGDIVESEHVCRVMESHGFHFDRTMFST 545
+A +LD M GL P+ + KTLFYGLCK G +E+E + ME+ GF D+ M+++
Sbjct: 214 GEAIEVLDIMCRITGLPPTLHMLKTLFYGLCKRGWSIEAEWIFEEMEAQGFFVDKVMYTS 273
Query: 546 LIS 554
L++
Sbjct: 274 LMN 276
>ref|XP_003571953.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g62370-like [Brachypodium distachyon]
Length = 926
Score = 104 bits (259), Expect = 2e-20
Identities = 58/175 (33%), Positives = 98/175 (56%)
Frame = +3
Query: 27 RSLVSSRQFLKAKALFAHSTGGELPEDSSVLDAMVECFCKLGKLVDSKPLLDHMIKIRSL 206
R L+++ + + ++ AH+ D ++ DA+V C LG + + DH+I+ R +
Sbjct: 23 RGLLANARAVASRIGLAHT-------DPALSDALVACHSHLGNIASALTCFDHLIESRYV 75
Query: 207 PSKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFVQAHHL 386
PS + ALLR +CA + E +DLFVL GA +S + LI+GLCSKG +A L
Sbjct: 76 PSPASSAALLRAMCAASMYSEVVDLFVLWEGAPSPLPVSKFPFLIHGLCSKGAVDKARFL 135
Query: 387 LDKMVSRGLSPSSQLCKTLFYGLCKGGDIVESEHVCRVMESHGFHFDRTMFSTLI 551
D M+ GL+P ++ K+L + CK +E++ +C +M +G + DR + + L+
Sbjct: 136 FDVMLGLGLAPPVRVYKSLVFTYCKARRSLEADEMCCLMVKNGMYLDRMLGTALV 190
Score = 78.6 bits (192), Expect = 9e-13
Identities = 49/153 (32%), Positives = 77/153 (50%)
Frame = +3
Query: 96 LPEDSSVLDAMVECFCKLGKLVDSKPLLDHMIKIRSLPSKRTYTALLRLLCAEEKFLEAL 275
LP D+ +L+ M+ C G+L S LLD ++ PS TY +++ LC +++ +A
Sbjct: 391 LPIDA-ILNMMIIAMCSEGRLDVSYYLLDKLVAYGYEPSVLTYNIVIKYLCRQKRMDDAR 449
Query: 276 DLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFVQAHHLLDKMVSRGLSPSSQLCKTLFYGL 455
L LM GV PDMS + ++ C G A L D+M GL PS + ++ L
Sbjct: 450 TLINLMQSRGVRPDMSTNSIMVTAYCKIGDIESALSLFDEMAKDGLEPSIAVYDSIIACL 509
Query: 456 CKGGDIVESEHVCRVMESHGFHFDRTMFSTLIS 554
C+ G E+E R M G D +++TL++
Sbjct: 510 CRLGHFKEAEFTLRQMIEAGLVPDEVIYTTLLN 542
Score = 74.7 bits (182), Expect = 1e-11
Identities = 51/181 (28%), Positives = 78/181 (43%)
Frame = +3
Query: 12 YGRILRSLVSSRQFLKAKALFAHSTGGELPEDSSVLDAMVECFCKLGKLVDSKPLLDHMI 191
Y +++ L ++ A+ L + D S MV +CK+G + + L D M
Sbjct: 432 YNIVIKYLCRQKRMDDARTLINLMQSRGVRPDMSTNSIMVTAYCKIGDIESALSLFDEMA 491
Query: 192 KIRSLPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFV 371
K PS Y +++ LC F EA M AG+ PD Y +L+ G + H
Sbjct: 492 KDGLEPSIAVYDSIIACLCRLGHFKEAEFTLRQMIEAGLVPDEVIYTTLLNGYSTMRHTK 551
Query: 372 QAHHLLDKMVSRGLSPSSQLCKTLFYGLCKGGDIVESEHVCRVMESHGFHFDRTMFSTLI 551
A + D+M+ RGL P S L GL K I ++ H M GF +++ LI
Sbjct: 552 AACRVFDEMLERGLQPGSHAYGALINGLVKDNKIRKALHYLERMLEEGFATQTVIYTMLI 611
Query: 552 S 554
+
Sbjct: 612 N 612
>ref|XP_006858678.1| hypothetical protein AMTR_s00066p00081840 [Amborella trichopoda]
gi|548862789|gb|ERN20145.1| hypothetical protein
AMTR_s00066p00081840 [Amborella trichopoda]
Length = 992
Score = 102 bits (254), Expect = 6e-20
Identities = 56/177 (31%), Positives = 97/177 (54%)
Frame = +3
Query: 21 ILRSLVSSRQFLKAKALFAHSTGGELPEDSSVLDAMVECFCKLGKLVDSKPLLDHMIKIR 200
+LRSLV S KA+ + + E+ D +++ M+ C+ +LGKL + L+ ++++
Sbjct: 86 LLRSLVVSGHASKAEEFYNYLLSREIVPDPDMVNCMIICYSRLGKLQKAIDHLEALVQVG 145
Query: 201 SLPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFVQAH 380
SLPS A ++ LC +E+ EAL LF V P S +++ LCS+G+F +A
Sbjct: 146 SLPSSPAINASIQELCIKERVPEALSLFYRAISFKVLPSSSSCRLVLFSLCSRGNFDKAL 205
Query: 381 HLLDKMVSRGLSPSSQLCKTLFYGLCKGGDIVESEHVCRVMESHGFHFDRTMFSTLI 551
+ + MV G+ PS Q K+L + K + E+E++CR+ME G +++L+
Sbjct: 206 QVFETMVGSGMKPSIQFYKSLMHFCFKNKRVEEAEYLCRLMELQGLSPKLETYTSLL 262
Score = 70.1 bits (170), Expect = 3e-10
Identities = 51/166 (30%), Positives = 73/166 (43%), Gaps = 1/166 (0%)
Frame = +3
Query: 21 ILRSLVSSRQFLKAKALFAHSTGGELPEDSSVLDAMVECFCKLGKLVDSKPLLDHMIKIR 200
+L SL S F KA +F G + +++ FC K V+ L +++++
Sbjct: 191 VLFSLCSRGNFDKALQVFETMVGSGMKPSIQFYKSLMH-FCFKNKRVEEAEYLCRLMELQ 249
Query: 201 SL-PSKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFVQA 377
L P TYT+LL C + K AL LF M G D YN+LIYG GH A
Sbjct: 250 GLSPKLETYTSLLYWYCKDGKMDMALKLFCRMGKMGFQLDTYTYNTLIYGFVKLGHLDLA 309
Query: 378 HHLLDKMVSRGLSPSSQLCKTLFYGLCKGGDIVESEHVCRVMESHG 515
++M +RGL P + CK + + + VM SHG
Sbjct: 310 WEYFNEMHARGLEPDVVTYSVIINRYCKDNRLDSALKLLDVMSSHG 355
Score = 63.5 bits (153), Expect = 3e-08
Identities = 45/181 (24%), Positives = 78/181 (43%)
Frame = +3
Query: 12 YGRILRSLVSSRQFLKAKALFAHSTGGELPEDSSVLDAMVECFCKLGKLVDSKPLLDHMI 191
Y +++ L + A+AL + L + + M+ CK LV + + M+
Sbjct: 495 YNSLVKCLFKEDRIADAEALVSSMRERGLVPNRATYLIMISGHCKERNLVLALRAFEEML 554
Query: 192 KIRSLPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFV 371
+ P+ Y +++ L E + EA +F + G PD+ Y +LI G G +
Sbjct: 555 ESGLEPTVAIYDSIIGCLGKENRTEEAESMFDWLFEGGTAPDVKVYTTLINGFSKVGRAL 614
Query: 372 QAHHLLDKMVSRGLSPSSQLCKTLFYGLCKGGDIVESEHVCRVMESHGFHFDRTMFSTLI 551
A +L ++M+ GL PSS L GL K + M GF DR ++++ I
Sbjct: 615 DACNLFEEMIDLGLKPSSHAYCALINGLIKRNMVQRGSSYLERMLEDGFKPDRVLYTSFI 674
Query: 552 S 554
+
Sbjct: 675 N 675
Score = 60.5 bits (145), Expect = 3e-07
Identities = 48/152 (31%), Positives = 69/152 (45%)
Frame = +3
Query: 96 LPEDSSVLDAMVECFCKLGKLVDSKPLLDHMIKIRSLPSKRTYTALLRLLCAEEKFLEAL 275
L D + + M+ FC+ + D+ LLD M++ P++ TYT L+ + A+
Sbjct: 782 LMPDLHIYNGMINGFCRADMMGDAYDLLDLMLQNGVHPNQVTYTILINGHSMHGEIDLAI 841
Query: 276 DLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFVQAHHLLDKMVSRGLSPSSQLCKTLFYGL 455
LF MA G PD YN+L+ GLC G V A L M +G PS L L
Sbjct: 842 KLFNQMAMDGYPPDKVTYNALLKGLCLAGRIVDALSLTLTMYKKGFVPSKISYDRLLEHL 901
Query: 456 CKGGDIVESEHVCRVMESHGFHFDRTMFSTLI 551
G I + ++ + M HG R F+ LI
Sbjct: 902 SVNGAIDLAFNLFQEMLMHGCAPCRYNFNRLI 933
>ref|XP_006836040.1| hypothetical protein AMTR_s00114p00044440 [Amborella trichopoda]
gi|548838462|gb|ERM98893.1| hypothetical protein
AMTR_s00114p00044440 [Amborella trichopoda]
Length = 843
Score = 102 bits (253), Expect = 8e-20
Identities = 57/180 (31%), Positives = 95/180 (52%)
Frame = +3
Query: 12 YGRILRSLVSSRQFLKAKALFAHSTGGELPEDSSVLDAMVECFCKLGKLVDSKPLLDHMI 191
YG I+ L + KA +FA L ++ + + +++ +CK G L ++ L D M+
Sbjct: 614 YGTIINGLCKNGNLAKAGEIFAEMREKGLSTETYIYNILMDGYCKKGLLDEALTLFDEML 673
Query: 192 KIRSLPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFV 371
+ P TY+ L+ C + +A ++F M G+ PD+ Y +LI GLC +G
Sbjct: 674 CESNAPDLVTYSTLICGFCKKSMMQKASEMFCKMTKDGISPDLICYTALINGLCKEGMVG 733
Query: 372 QAHHLLDKMVSRGLSPSSQLCKTLFYGLCKGGDIVESEHVCRVMESHGFHFDRTMFSTLI 551
+A LLDKMVS+G+ P S + L +GLC+ G I E+E++ + G + ++TLI
Sbjct: 734 RALSLLDKMVSQGVQPDSYILSALVFGLCRNGMIQEAENIFGEIMDMGMVPSSSAYNTLI 793
Score = 76.3 bits (186), Expect = 5e-12
Identities = 49/183 (26%), Positives = 87/183 (47%)
Frame = +3
Query: 6 PEYGRILRSLVSSRQFLKAKALFAHSTGGELPEDSSVLDAMVECFCKLGKLVDSKPLLDH 185
P Y +L SL +AK +F T L ++ V + +V +CK G + D+ L
Sbjct: 298 PYYNVLLDSLCKQGDCERAKLVFNGLTNQGLEPNAQVYNILVNGYCKSGLMDDALSLYHK 357
Query: 186 MIKIRSLPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGH 365
+ + T L +LC + +A ++ + + G+ P++ YN LI G C G+
Sbjct: 358 LYEKNLALDLITCNTFLSVLCKNSQVHKANEVLLKVVEKGMVPNVISYNILIDGYCQMGN 417
Query: 366 FVQAHHLLDKMVSRGLSPSSQLCKTLFYGLCKGGDIVESEHVCRVMESHGFHFDRTMFST 545
A L ++M G+ P+SQ +L G C+ G ++ +E++ M G + +F+T
Sbjct: 418 IGLACKLREEMEGAGILPNSQTYGSLVNGFCRVGSLLNAENLLLEMRDKGLAPNGVIFNT 477
Query: 546 LIS 554
LI+
Sbjct: 478 LIN 480
Score = 67.4 bits (163), Expect = 2e-09
Identities = 40/149 (26%), Positives = 73/149 (48%)
Frame = +3
Query: 105 DSSVLDAMVECFCKLGKLVDSKPLLDHMIKIRSLPSKRTYTALLRLLCAEEKFLEALDLF 284
D + ++ CK L ++ +L M K LP TY A++ C +EK ++ ++
Sbjct: 506 DMFTYNEILSGICKRDMLPLAEQILAEMFKNGFLPDSFTYIAIITKFC-KEKRVDLRKIY 564
Query: 285 VLMAGAGVFPDMSGYNSLIYGLCSKGHFVQAHHLLDKMVSRGLSPSSQLCKTLFYGLCKG 464
M +GV+PD+ N +I LCS G F +A L+++ + G S T+ GLCK
Sbjct: 565 REMCSSGVYPDLITCNIIIKSLCSDGFFFEALEFLEQIEADGQSLDKVTYGTIINGLCKN 624
Query: 465 GDIVESEHVCRVMESHGFHFDRTMFSTLI 551
G++ ++ + M G + +++ L+
Sbjct: 625 GNLAKAGEIFAEMREKGLSTETYIYNILM 653
Score = 62.4 bits (150), Expect = 7e-08
Identities = 48/180 (26%), Positives = 75/180 (41%)
Frame = +3
Query: 12 YGRILRSLVSSRQFLKAKALFAHSTGGELPEDSSVLDAMVECFCKLGKLVDSKPLLDHMI 191
Y IL + A+ + A DS A++ FCK K VD + + M
Sbjct: 510 YNEILSGICKRDMLPLAEQILAEMFKNGFLPDSFTYIAIITKFCK-EKRVDLRKIYREMC 568
Query: 192 KIRSLPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFV 371
P T +++ LC++ F EAL+ + G D Y ++I GLC G+
Sbjct: 569 SSGVYPDLITCNIIIKSLCSDGFFFEALEFLEQIEADGQSLDKVTYGTIINGLCKNGNLA 628
Query: 372 QAHHLLDKMVSRGLSPSSQLCKTLFYGLCKGGDIVESEHVCRVMESHGFHFDRTMFSTLI 551
+A + +M +GLS + + L G CK G + E+ + M D +STLI
Sbjct: 629 KAGEIFAEMREKGLSTETYIYNILMDGYCKKGLLDEALTLFDEMLCESNAPDLVTYSTLI 688
Score = 60.5 bits (145), Expect = 3e-07
Identities = 45/168 (26%), Positives = 74/168 (44%), Gaps = 18/168 (10%)
Frame = +3
Query: 90 GELPEDSSVLDAMVECFCKLGKLVDSKPLLDHMIKIRSLPSKRTYTALLRLLCAEEKFLE 269
G LP +S ++V FC++G L++++ LL M P+ + L+ C E K E
Sbjct: 432 GILP-NSQTYGSLVNGFCRVGSLLNAENLLLEMRDKGLAPNGVIFNTLINGYCNEGKVEE 490
Query: 270 ALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFVQAHHLLDKMVSRGLSPSS-------- 425
AL M G+ PDM YN ++ G+C + A +L +M G P S
Sbjct: 491 ALASCSEMVREGIHPDMFTYNEILSGICKRDMLPLAEQILAEMFKNGFLPDSFTYIAIIT 550
Query: 426 QLCK-------TLFYGLCKGG---DIVESEHVCRVMESHGFHFDRTMF 539
+ CK ++ +C G D++ + + + S GF F+ F
Sbjct: 551 KFCKEKRVDLRKIYREMCSSGVYPDLITCNIIIKSLCSDGFFFEALEF 598
Score = 59.3 bits (142), Expect = 6e-07
Identities = 36/143 (25%), Positives = 69/143 (48%)
Frame = +3
Query: 126 MVECFCKLGKLVDSKPLLDHMIKIRSLPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAG 305
+++ +C++G + + L + M LP+ +TY +L+ C L A +L + M G
Sbjct: 408 LIDGYCQMGNIGLACKLREEMEGAGILPNSQTYGSLVNGFCRVGSLLNAENLLLEMRDKG 467
Query: 306 VFPDMSGYNSLIYGLCSKGHFVQAHHLLDKMVSRGLSPSSQLCKTLFYGLCKGGDIVESE 485
+ P+ +N+LI G C++G +A +MV G+ P + G+CK + +E
Sbjct: 468 LAPNGVIFNTLINGYCNEGKVEEALASCSEMVREGIHPDMFTYNEILSGICKRDMLPLAE 527
Query: 486 HVCRVMESHGFHFDRTMFSTLIS 554
+ M +GF D + +I+
Sbjct: 528 QILAEMFKNGFLPDSFTYIAIIT 550
Score = 56.2 bits (134), Expect = 5e-06
Identities = 37/139 (26%), Positives = 60/139 (43%)
Frame = +3
Query: 12 YGRILRSLVSSRQFLKAKALFAHSTGGELPEDSSVLDAMVECFCKLGKLVDSKPLLDHMI 191
Y ++ KA +F T + D A++ CK G + + LLD M+
Sbjct: 684 YSTLICGFCKKSMMQKASEMFCKMTKDGISPDLICYTALINGLCKEGMVGRALSLLDKMV 743
Query: 192 KIRSLPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFV 371
P +AL+ LC EA ++F + G+ P S YN+LI L KG
Sbjct: 744 SQGVQPDSYILSALVFGLCRNGMIQEAENIFGEIMDMGMVPSSSAYNTLIGELSRKGLLE 803
Query: 372 QAHHLLDKMVSRGLSPSSQ 428
+A + +++ RG+ P +Q
Sbjct: 804 RAFDIRHRVLERGVLPEAQ 822
>ref|XP_006858679.1| hypothetical protein AMTR_s00066p00082400 [Amborella trichopoda]
gi|548862790|gb|ERN20146.1| hypothetical protein
AMTR_s00066p00082400 [Amborella trichopoda]
Length = 992
Score = 101 bits (251), Expect = 1e-19
Identities = 55/165 (33%), Positives = 91/165 (55%)
Frame = +3
Query: 21 ILRSLVSSRQFLKAKALFAHSTGGELPEDSSVLDAMVECFCKLGKLVDSKPLLDHMIKIR 200
+LR LV S KA+ + + E+ D +++ M+ C+ +LGKL + L+ ++++
Sbjct: 86 LLRRLVVSGHASKAEEFYNYLLSREIVPDPDMVNCMIICYSRLGKLQKAIDHLEALVQVG 145
Query: 201 SLPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFVQAH 380
SLPS A ++ LC +E+ EAL LF V P S L++ LCS+G+F +A
Sbjct: 146 SLPSSPAINASIQELCIKERVPEALSLFYKAISFKVLPSSSSCRLLLFSLCSRGNFDKAL 205
Query: 381 HLLDKMVSRGLSPSSQLCKTLFYGLCKGGDIVESEHVCRVMESHG 515
+ + MV G+ PS Q K+L + K + E+E++CR+ME G
Sbjct: 206 QVFETMVGSGMKPSIQFYKSLMHFCFKNKRVEEAEYLCRLMELQG 250
Score = 68.6 bits (166), Expect = 1e-09
Identities = 51/166 (30%), Positives = 72/166 (43%), Gaps = 1/166 (0%)
Frame = +3
Query: 21 ILRSLVSSRQFLKAKALFAHSTGGELPEDSSVLDAMVECFCKLGKLVDSKPLLDHMIKIR 200
+L SL S F KA +F G + +++ FC K V+ L +++++
Sbjct: 191 LLFSLCSRGNFDKALQVFETMVGSGMKPSIQFYKSLMH-FCFKNKRVEEAEYLCRLMELQ 249
Query: 201 SL-PSKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFVQA 377
L P TYT LL C + K AL LF M G D YN+LIYG GH A
Sbjct: 250 GLSPKLETYTFLLYWYCKDGKMDMALKLFCRMGKMGFQLDTYTYNTLIYGFVKLGHLDLA 309
Query: 378 HHLLDKMVSRGLSPSSQLCKTLFYGLCKGGDIVESEHVCRVMESHG 515
++M +RGL P + CK + + + VM SHG
Sbjct: 310 WEYFNEMHARGLEPDVVTYSVIINRYCKDNRLDSALKLLDVMSSHG 355
Score = 66.6 bits (161), Expect = 4e-09
Identities = 48/181 (26%), Positives = 78/181 (43%)
Frame = +3
Query: 12 YGRILRSLVSSRQFLKAKALFAHSTGGELPEDSSVLDAMVECFCKLGKLVDSKPLLDHMI 191
Y +++ L + A+AL + L + + M+ CK LV + + MI
Sbjct: 495 YNSLVKCLFKEDRIADAEALVSSMRERGLVPNRATYLIMISGHCKERNLVLALRAFEEMI 554
Query: 192 KIRSLPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFV 371
+ P+ Y +++ L E + EA +F + G PD+ Y +LI G G +
Sbjct: 555 ESGLEPTVAIYDSIIGCLGKENRMEEAKSMFNWLFEGGTAPDVEVYTTLINGFSKVGRAL 614
Query: 372 QAHHLLDKMVSRGLSPSSQLCKTLFYGLCKGGDIVESEHVCRVMESHGFHFDRTMFSTLI 551
A +L ++M+ GL PSS L GL K + M GF DR +++T I
Sbjct: 615 DACNLFEEMIDLGLKPSSHAYCALINGLIKRNMVQRGCSYLERMLEDGFKPDRVLYNTFI 674
Query: 552 S 554
S
Sbjct: 675 S 675
Score = 58.2 bits (139), Expect = 1e-06
Identities = 38/146 (26%), Positives = 66/146 (45%)
Frame = +3
Query: 105 DSSVLDAMVECFCKLGKLVDSKPLLDHMIKIRSLPSKRTYTALLRLLCAEEKFLEALDLF 284
D+ + ++ F KLG L + + M P TY+ ++ C + + AL L
Sbjct: 289 DTYTYNTLIYGFVKLGHLDLAWEYFNEMHARGLEPDVVTYSVIINRYCKDNRLDSALKLL 348
Query: 285 VLMAGAGVFPDMSGYNSLIYGLCSKGHFVQAHHLLDKMVSRGLSPSSQLCKTLFYGLCKG 464
+M+ GV P++ Y LI LC + F +A L +KM+ GL+P + +L K
Sbjct: 349 DVMSSHGVAPNVHCYTVLIQALCKENRFSEADFLFNKMLDSGLAPDHIMFLSLINNYPKD 408
Query: 465 GDIVESEHVCRVMESHGFHFDRTMFS 542
+ + + + + M H D +FS
Sbjct: 409 REPLLALKLLKAMARHNCSLDDLVFS 434
Score = 58.2 bits (139), Expect = 1e-06
Identities = 38/150 (25%), Positives = 62/150 (41%)
Frame = +3
Query: 12 YGRILRSLVSSRQFLKAKALFAHSTGGELPEDSSVLDAMVECFCKLGKLVDSKPLLDHMI 191
Y I+ L + +AK++F G D V ++ F K+G+ +D+ L + MI
Sbjct: 565 YDSIIGCLGKENRMEEAKSMFNWLFEGGTAPDVEVYTTLINGFSKVGRALDACNLFEEMI 624
Query: 192 KIRSLPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFV 371
+ PS Y AL+ L M G PD YN+ I C +G
Sbjct: 625 DLGLKPSSHAYCALINGLIKRNMVQRGCSYLERMLEDGFKPDRVLYNTFISQFCRRGEIG 684
Query: 372 QAHHLLDKMVSRGLSPSSQLCKTLFYGLCK 461
A +D+M+ + P+ +L G+C+
Sbjct: 685 VALSFVDQMIKNQIEPNLITYGSLISGVCR 714
>emb|CBI21970.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 95.5 bits (236), Expect = 7e-18
Identities = 54/181 (29%), Positives = 93/181 (51%)
Frame = +3
Query: 9 EYGRILRSLVSSRQFLKAKALFAHSTGGELPEDSSVLDAMVECFCKLGKLVDSKPLLDHM 188
++ ++L S+ + + +L+ +P ++ L+ ++ FC L +L + +L +
Sbjct: 12 DFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDI 71
Query: 189 IKIRSLPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHF 368
+K+ PS T+T L+R LC E K EAL LF M G G PD+ Y +LI GLC
Sbjct: 72 LKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQL 131
Query: 369 VQAHHLLDKMVSRGLSPSSQLCKTLFYGLCKGGDIVESEHVCRVMESHGFHFDRTMFSTL 548
+A L M+++G+SP++ +L +GLC G E+ + M D+ F+TL
Sbjct: 132 TEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTL 191
Query: 549 I 551
+
Sbjct: 192 V 192
Score = 73.2 bits (178), Expect = 4e-11
Identities = 41/152 (26%), Positives = 71/152 (46%)
Frame = +3
Query: 57 KAKALFAHSTGGELPEDSSVLDAMVECFCKLGKLVDSKPLLDHMIKIRSLPSKRTYTALL 236
KA LF + L D+ + ++ C +G+L D+ L M+ +P TY L
Sbjct: 206 KAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILF 265
Query: 237 RLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFVQAHHLLDKMVSRGLS 416
LC + EA+ L ++ G + PD+ Y+ ++ G+C G A L K+ S+GL
Sbjct: 266 DYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLH 325
Query: 417 PSSQLCKTLFYGLCKGGDIVESEHVCRVMESH 512
P + + GLC+ G + E+ + M+ +
Sbjct: 326 PDVRTYTIMINGLCQQGLLAEASKLFGEMDEN 357
Score = 67.0 bits (162), Expect = 3e-09
Identities = 52/219 (23%), Positives = 89/219 (40%), Gaps = 38/219 (17%)
Frame = +3
Query: 12 YGRILRSLVSSRQFLKAKALFAHSTGGELPEDSSVLDAMVECFCKLGKLVDSKPLLDHMI 191
YG ++ L RQ +A +LF+ + ++ +++ C LG ++ L MI
Sbjct: 118 YGTLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMI 177
Query: 192 KIRSLPSKRTYTALLRLLCAEEKFL---EALDLFVLMAGAGVFPDMSGYNSLIYGLCSKG 362
+ +P + T+ L+ LC E +A+ LF M+ G+ PD YN+LI+GLC G
Sbjct: 178 HRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVG 237
Query: 363 HFVQAHHLLDKMVSRGLSPS--------SQLCKT-------------------------- 440
A L +MV G P LCK
Sbjct: 238 RLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYS 297
Query: 441 -LFYGLCKGGDIVESEHVCRVMESHGFHFDRTMFSTLIS 554
+ G+C+ G++ + + + S G H D ++ +I+
Sbjct: 298 IVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMIN 336
Score = 65.9 bits (159), Expect = 6e-09
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 3/168 (1%)
Frame = +3
Query: 21 ILRSLVSSRQFLKAKALFAHSTGGELPEDSSVLDAMVECFCKLGKLVDSKPLLDHMIKIR 200
++R L + +A LF TG D ++ CK +L ++ L M+
Sbjct: 86 LIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAKG 145
Query: 201 SLPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFV--- 371
P+ TY++L+ LC + EA+ LF M + PD +N+L+ LC +G
Sbjct: 146 ISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMD 205
Query: 372 QAHHLLDKMVSRGLSPSSQLCKTLFYGLCKGGDIVESEHVCRVMESHG 515
+A L ++M +GL P + TL +GLC G + ++ + M +G
Sbjct: 206 KAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYG 253
>gb|ACU25596.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 94.4 bits (233), Expect = 2e-17
Identities = 52/159 (32%), Positives = 80/159 (50%)
Frame = +3
Query: 78 HSTGGELPEDSSVLDAMVECFCKLGKLVDSKPLLDHMIKIRSLPSKRTYTALLRLLCAEE 257
H++G + D ++ CK GKL ++ L + M+ +P+ T+T L+ C E
Sbjct: 198 HASGAQ--PDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNE 255
Query: 258 KFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFVQAHHLLDKMVSRGLSPSSQLCK 437
K A++++ M G+ PD+ YN+LIYGLC KG Q H L+D+M+ GL P
Sbjct: 256 KVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYT 315
Query: 438 TLFYGLCKGGDIVESEHVCRVMESHGFHFDRTMFSTLIS 554
TL G CK GD+ + + M D ++ LIS
Sbjct: 316 TLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALIS 354
Score = 73.2 bits (178), Expect = 4e-11
Identities = 50/164 (30%), Positives = 79/164 (48%)
Frame = +3
Query: 60 AKALFAHSTGGELPEDSSVLDAMVECFCKLGKLVDSKPLLDHMIKIRSLPSKRTYTALLR 239
A+++F T L + ++ + KLG L + L M + P TY+ L+
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILIN 214
Query: 240 LLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFVQAHHLLDKMVSRGLSP 419
LC E K EA +LF M G+ P+ + +LI+G C A + +M+S+GLSP
Sbjct: 215 GLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSP 274
Query: 420 SSQLCKTLFYGLCKGGDIVESEHVCRVMESHGFHFDRTMFSTLI 551
TL YGLCK G++ + + M +G D+ ++TLI
Sbjct: 275 DLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLI 318
Score = 56.6 bits (135), Expect = 4e-06
Identities = 41/140 (29%), Positives = 60/140 (42%)
Frame = +3
Query: 96 LPEDSSVLDAMVECFCKLGKLVDSKPLLDHMIKIRSLPSKRTYTALLRLLCAEEKFLEAL 275
L D + ++ CK G+L L+D MI P K +YT L+ C E AL
Sbjct: 272 LSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIAL 331
Query: 276 DLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFVQAHHLLDKMVSRGLSPSSQLCKTLFYGL 455
+L M + D Y +LI LC +G A +L +M+S GL P + +
Sbjct: 332 ELRNKMIQESIRLDDVAYTALISCLCREGRAGDAEKMLREMLSVGLKPDNGTYTMIINEF 391
Query: 456 CKGGDIVESEHVCRVMESHG 515
CK D + + R M+ G
Sbjct: 392 CKKRDSKTASKLLREMQRDG 411
>gb|ACU25595.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 94.4 bits (233), Expect = 2e-17
Identities = 52/159 (32%), Positives = 80/159 (50%)
Frame = +3
Query: 78 HSTGGELPEDSSVLDAMVECFCKLGKLVDSKPLLDHMIKIRSLPSKRTYTALLRLLCAEE 257
H++G + D ++ CK GKL ++ L + M+ +P+ T+T L+ C E
Sbjct: 198 HASGAQ--PDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNE 255
Query: 258 KFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFVQAHHLLDKMVSRGLSPSSQLCK 437
K A++++ M G+ PD+ YN+LIYGLC KG Q H L+D+M+ GL P
Sbjct: 256 KVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYT 315
Query: 438 TLFYGLCKGGDIVESEHVCRVMESHGFHFDRTMFSTLIS 554
TL G CK GD+ + + M D ++ LIS
Sbjct: 316 TLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALIS 354
Score = 73.2 bits (178), Expect = 4e-11
Identities = 50/164 (30%), Positives = 79/164 (48%)
Frame = +3
Query: 60 AKALFAHSTGGELPEDSSVLDAMVECFCKLGKLVDSKPLLDHMIKIRSLPSKRTYTALLR 239
A+++F T L + ++ + KLG L + L M + P TY+ L+
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILIN 214
Query: 240 LLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFVQAHHLLDKMVSRGLSP 419
LC E K EA +LF M G+ P+ + +LI+G C A + +M+S+GLSP
Sbjct: 215 GLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSP 274
Query: 420 SSQLCKTLFYGLCKGGDIVESEHVCRVMESHGFHFDRTMFSTLI 551
TL YGLCK G++ + + M +G D+ ++TLI
Sbjct: 275 DLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLI 318
Score = 57.0 bits (136), Expect = 3e-06
Identities = 41/140 (29%), Positives = 60/140 (42%)
Frame = +3
Query: 96 LPEDSSVLDAMVECFCKLGKLVDSKPLLDHMIKIRSLPSKRTYTALLRLLCAEEKFLEAL 275
L D + ++ CK G+L L+D MI P K +YT L+ C E AL
Sbjct: 272 LSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIAL 331
Query: 276 DLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFVQAHHLLDKMVSRGLSPSSQLCKTLFYGL 455
+L M + D Y +LI LC +G A +L +M+S GL P + +
Sbjct: 332 ELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLREMLSVGLKPDNGTYTMIINEF 391
Query: 456 CKGGDIVESEHVCRVMESHG 515
CK D + + R M+ G
Sbjct: 392 CKKRDSKTASKLLREMQRDG 411
>ref|XP_002312829.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222849237|gb|EEE86784.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 734
Score = 94.4 bits (233), Expect = 2e-17
Identities = 63/181 (34%), Positives = 96/181 (53%), Gaps = 3/181 (1%)
Frame = +3
Query: 21 ILRSLVSSRQFLKAKALFA-HSTGGELPEDSSVLDAMVECFCKLGKLVDSKPLLDHMIKI 197
+LR LV + L A + H DS+++++M+ C KLGKL D+ L D +I
Sbjct: 96 LLRKLVDLGEPLSAHEFYRDHVIARGTEPDSNIVNSMIICLAKLGKLDDAVRLFDRLIGS 155
Query: 198 RS-LPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFVQ 374
+ S +L +++FLEA D V ++ A V M Y LI GLC + + +
Sbjct: 156 DDCVLSNAACIMILEGFYEQDRFLEAFDYLVRISDANVKLGMWVYTVLINGLCHQRYVGE 215
Query: 375 AHHLLDKMVSR-GLSPSSQLCKTLFYGLCKGGDIVESEHVCRVMESHGFHFDRTMFSTLI 551
A + D M R G P+ + KTLF+GLCK G +VE+E V ME GF D+ M+++L+
Sbjct: 216 AIQVFDIMCKRTGSPPTLHMFKTLFFGLCKAGWLVEAELVFEEMEVQGFFVDKVMYTSLM 275
Query: 552 S 554
+
Sbjct: 276 N 276
>ref|XP_006847029.1| hypothetical protein AMTR_s00017p00176770 [Amborella trichopoda]
gi|548850058|gb|ERN08610.1| hypothetical protein
AMTR_s00017p00176770 [Amborella trichopoda]
Length = 658
Score = 94.0 bits (232), Expect = 2e-17
Identities = 56/180 (31%), Positives = 89/180 (49%)
Frame = +3
Query: 12 YGRILRSLVSSRQFLKAKALFAHSTGGELPEDSSVLDAMVECFCKLGKLVDSKPLLDHMI 191
Y IL L + AK L+ + + A+++ CK G L ++K L M
Sbjct: 220 YNTILAGLCKDGKIRAAKKLYKEMKNQGIRSNLLTYTALIDGLCKEGSLDEAKKLFYEMS 279
Query: 192 KIRSLPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFV 371
+ PS TY+AL+ LCA+ ++ +A + M G+ P++ Y ++ GLC +G
Sbjct: 280 EKNISPSVVTYSALVHGLCAKGQWRDATMILHEMLDRGLSPNVITYTGVLGGLCKEGRLP 339
Query: 372 QAHHLLDKMVSRGLSPSSQLCKTLFYGLCKGGDIVESEHVCRVMESHGFHFDRTMFSTLI 551
QA LLD M +G+ P++ TL GLCKGG + ++ R+ME G + +S LI
Sbjct: 340 QALRLLDSMFQKGIEPNAVTYTTLIDGLCKGGRLDDAMRTFRLMEERGHGSNLVAYSVLI 399
Score = 68.9 bits (167), Expect = 7e-10
Identities = 43/177 (24%), Positives = 83/177 (46%)
Frame = +3
Query: 21 ILRSLVSSRQFLKAKALFAHSTGGELPEDSSVLDAMVECFCKLGKLVDSKPLLDHMIKIR 200
+L +LV +F + + + D L+ M+ +C+ ++ + +LD +
Sbjct: 83 VLATLVRVNKFQATLSTYDLINQSRIVPDLVTLNIMMNFYCETHQIDRAFQVLDQIQAFN 142
Query: 201 SLPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFVQAH 380
P+ TY L++ LC + AL + M G FP+ Y+ +I GLC+
Sbjct: 143 YAPTVVTYNTLIKGLCKSKMVSAALRILQKMGMEGPFPNDRTYSIVIDGLCNSSRSELCL 202
Query: 381 HLLDKMVSRGLSPSSQLCKTLFYGLCKGGDIVESEHVCRVMESHGFHFDRTMFSTLI 551
L+ +M+ +GL+P+ T+ GLCK G I ++ + + M++ G + ++ LI
Sbjct: 203 GLIGEMLQKGLNPTVVTYNTILAGLCKDGKIRAAKKLYKEMKNQGIRSNLLTYTALI 259
Score = 64.3 bits (155), Expect = 2e-08
Identities = 49/180 (27%), Positives = 75/180 (41%)
Frame = +3
Query: 12 YGRILRSLVSSRQFLKAKALFAHSTGGELPEDSSVLDAMVECFCKLGKLVDSKPLLDHMI 191
Y ++ L +AK LF + + A+V C G+ D+ +L M+
Sbjct: 255 YTALIDGLCKEGSLDEAKKLFYEMSEKNISPSVVTYSALVHGLCAKGQWRDATMILHEML 314
Query: 192 KIRSLPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFV 371
P+ TYT +L LC E + +AL L M G+ P+ Y +LI GLC G
Sbjct: 315 DRGLSPNVITYTGVLGGLCKEGRLPQALRLLDSMFQKGIEPNAVTYTTLIDGLCKGGRLD 374
Query: 372 QAHHLLDKMVSRGLSPSSQLCKTLFYGLCKGGDIVESEHVCRVMESHGFHFDRTMFSTLI 551
A M RG + L G CK G I E+ + R + + G +++TL+
Sbjct: 375 DAMRTFRLMEERGHGSNLVAYSVLIDGFCKIGKIEEAMELFRELVAKGSRPHVIIYNTLM 434
Score = 63.9 bits (154), Expect = 2e-08
Identities = 37/136 (27%), Positives = 64/136 (47%)
Frame = +3
Query: 114 VLDAMVECFCKLGKLVDSKPLLDHMIKIRSLPSKRTYTALLRLLCAEEKFLEALDLFVLM 293
+ + +++ + K+G+L ++ L D M + P+ +YT L+ C + +DLF M
Sbjct: 429 IYNTLMDGYIKMGQLEVAQRLFDEMKEQNEEPNVTSYTVLMNGFCKAGALEKVMDLFEEM 488
Query: 294 AGAGVFPDMSGYNSLIYGLCSKGHFVQAHHLLDKMVSRGLSPSSQLCKTLFYGLCKGGDI 473
G P++ YN+LI GLC G F A +L +M RG+ ++ GL K +
Sbjct: 489 TKQGKKPNVITYNTLINGLCKAGKFQDAKGMLSEMCERGIEADVVTYSSIINGLRKKQQL 548
Query: 474 VESEHVCRVMESHGFH 521
E+ + G H
Sbjct: 549 NEARESFAYVVEKGIH 564
Score = 58.9 bits (141), Expect = 8e-07
Identities = 44/181 (24%), Positives = 79/181 (43%)
Frame = +3
Query: 12 YGRILRSLVSSRQFLKAKALFAHSTGGELPEDSSVLDAMVECFCKLGKLVDSKPLLDHMI 191
Y ++ L + Q+ A + L + ++ CK G+L + LLD M
Sbjct: 290 YSALVHGLCAKGQWRDATMILHEMLDRGLSPNVITYTGVLGGLCKEGRLPQALRLLDSMF 349
Query: 192 KIRSLPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFV 371
+ P+ TYT L+ LC + +A+ F LM G ++ Y+ LI G C G
Sbjct: 350 QKGIEPNAVTYTTLIDGLCKGGRLDDAMRTFRLMEERGHGSNLVAYSVLIDGFCKIGKIE 409
Query: 372 QAHHLLDKMVSRGLSPSSQLCKTLFYGLCKGGDIVESEHVCRVMESHGFHFDRTMFSTLI 551
+A L ++V++G P + TL G K G + ++ + M+ + T ++ L+
Sbjct: 410 EAMELFRELVAKGSRPHVIIYNTLMDGYIKMGQLEVAQRLFDEMKEQNEEPNVTSYTVLM 469
Query: 552 S 554
+
Sbjct: 470 N 470
Score = 58.9 bits (141), Expect = 8e-07
Identities = 36/143 (25%), Positives = 64/143 (44%)
Frame = +3
Query: 126 MVECFCKLGKLVDSKPLLDHMIKIRSLPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAG 305
+++ FCK+GK+ ++ L ++ S P Y L+ + A LF M
Sbjct: 398 LIDGFCKIGKIEEAMELFRELVAKGSRPHVIIYNTLMDGYIKMGQLEVAQRLFDEMKEQN 457
Query: 306 VFPDMSGYNSLIYGLCSKGHFVQAHHLLDKMVSRGLSPSSQLCKTLFYGLCKGGDIVESE 485
P+++ Y L+ G C G + L ++M +G P+ TL GLCK G +++
Sbjct: 458 EEPNVTSYTVLMNGFCKAGALEKVMDLFEEMTKQGKKPNVITYNTLINGLCKAGKFQDAK 517
Query: 486 HVCRVMESHGFHFDRTMFSTLIS 554
+ M G D +S++I+
Sbjct: 518 GMLSEMCERGIEADVVTYSSIIN 540
Score = 57.0 bits (136), Expect = 3e-06
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 1/169 (0%)
Frame = +3
Query: 12 YGRILRSLVSSRQFLKA-KALFAHSTGGELPEDSSVLDAMVECFCKLGKLVDSKPLLDHM 188
Y +++ L S+ A + L G P D + +++ C + L+ M
Sbjct: 150 YNTLIKGLCKSKMVSAALRILQKMGMEGPFPNDRTY-SIVIDGLCNSSRSELCLGLIGEM 208
Query: 189 IKIRSLPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHF 368
++ P+ TY +L LC + K A L+ M G+ ++ Y +LI GLC +G
Sbjct: 209 LQKGLNPTVVTYNTILAGLCKDGKIRAAKKLYKEMKNQGIRSNLLTYTALIDGLCKEGSL 268
Query: 369 VQAHHLLDKMVSRGLSPSSQLCKTLFYGLCKGGDIVESEHVCRVMESHG 515
+A L +M + +SPS L +GLC G ++ + M G
Sbjct: 269 DEAKKLFYEMSEKNISPSVVTYSALVHGLCAKGQWRDATMILHEMLDRG 317
Score = 57.0 bits (136), Expect = 3e-06
Identities = 40/157 (25%), Positives = 65/157 (41%)
Frame = +3
Query: 12 YGRILRSLVSSRQFLKAKALFAHSTGGELPEDSSVLDAMVECFCKLGKLVDSKPLLDHMI 191
Y ++ + Q A+ LF + + ++ FCK G L L + M
Sbjct: 430 YNTLMDGYIKMGQLEVAQRLFDEMKEQNEEPNVTSYTVLMNGFCKAGALEKVMDLFEEMT 489
Query: 192 KIRSLPSKRTYTALLRLLCAEEKFLEALDLFVLMAGAGVFPDMSGYNSLIYGLCSKGHFV 371
K P+ TY L+ LC KF +A + M G+ D+ Y+S+I GL K
Sbjct: 490 KQGKKPNVITYNTLINGLCKAGKFQDAKGMLSEMCERGIEADVVTYSSIINGLRKKQQLN 549
Query: 372 QAHHLLDKMVSRGLSPSSQLCKTLFYGLCKGGDIVES 482
+A +V +G+ P+ + LC G+I E+
Sbjct: 550 EARESFAYVVEKGIHPNIVTYNSNLQELCVKGEIEEA 586