BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00036361
         (971 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275897.1| PREDICTED: pentatricopeptide repeat-containi...   395   e-107
emb|CAN65544.1| hypothetical protein VITISV_018576 [Vitis vinifera]   395   e-107
gb|EXC35649.1| hypothetical protein L484_001633 [Morus notabilis]     387   e-105
gb|EOY03311.1| Pentatricopeptide repeat (PPR-like) superfamily p...   382   e-103
ref|XP_004308527.1| PREDICTED: pentatricopeptide repeat-containi...   379   e-103
ref|XP_002441982.1| hypothetical protein SORBIDRAFT_08g006380 [S...   378   e-102
ref|XP_004978285.1| PREDICTED: pentatricopeptide repeat-containi...   376   e-102
gb|EMJ21762.1| hypothetical protein PRUPE_ppa003304mg [Prunus pe...   375   e-101
gb|EEC69001.1| hypothetical protein OsI_37782 [Oryza sativa Indi...   375   e-101
ref|XP_004156247.1| PREDICTED: pentatricopeptide repeat-containi...   374   e-101
ref|XP_004141633.1| PREDICTED: pentatricopeptide repeat-containi...   374   e-101
ref|NP_001141997.1| hypothetical protein [Zea mays] gi|194706740...   374   e-101
ref|XP_002325518.2| pentatricopeptide repeat-containing family p...   372   e-101
ref|XP_006478380.1| PREDICTED: pentatricopeptide repeat-containi...   372   e-100
ref|XP_002888838.1| pentatricopeptide repeat-containing protein ...   369   e-100
emb|CBI31326.3| unnamed protein product [Vitis vinifera]              369   1e-99
ref|XP_003534476.1| PREDICTED: pentatricopeptide repeat-containi...   368   2e-99
gb|EEE52923.1| hypothetical protein OsJ_35543 [Oryza sativa Japo...   368   2e-99
ref|XP_006301077.1| hypothetical protein CARUB_v10021470mg [Caps...   367   3e-99
ref|XP_006664430.1| PREDICTED: pentatricopeptide repeat-containi...   367   4e-99

>ref|XP_002275897.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
            chloroplastic-like [Vitis vinifera]
          Length = 725

 Score =  395 bits (1014), Expect = e-107
 Identities = 187/323 (57%), Positives = 246/323 (76%)
 Frame = +2

Query: 2    LGREVHGFVLKRSRYYHNMVFVLAGLINMYCKCGDMVSARRVFYGSHERNAVSWTALISG 181
            LGREVH +V+K ++ Y   VF+ + LI+MYCKCGDM S R+VFY S ERNAVSWTAL+SG
Sbjct: 373  LGREVHAYVVK-TKSYSKQVFIQSALIDMYCKCGDMASGRQVFYASTERNAVSWTALMSG 431

Query: 182  YASCGRFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGKEMHAFTVKHCFLPN 361
            Y S GR +QALRSIAWMQQEG +PD+VT+AT +PVCA+++A + GKE+H++ VK+ FLPN
Sbjct: 432  YVSNGRLDQALRSIAWMQQEGFRPDVVTVATVLPVCAELRALRQGKEIHSYAVKNGFLPN 491

Query: 362  ISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNGSPCDALSVFRSMLQ 541
            +SI+TSLM MYS  GN+DYS +LF+ M  RNV++WTA+ID+Y +NG   +A+ VFRSM  
Sbjct: 492  VSIATSLMVMYSKCGNLDYSFKLFDGMDARNVISWTAMIDSYVENGCLHEAVGVFRSMQL 551

Query: 542  TKQRPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLESVPIVMAEVVKMYGKFRNVDN 721
            +K RPD VA+ARILSICGE+  +K+G E+H Q+LK   ES+P V AE++KMYGKF  +  
Sbjct: 552  SKHRPDSVAMARILSICGELRVLKLGKEIHGQILKKDFESIPFVSAEIIKMYGKFGAISK 611

Query: 722  ARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNGLVPNHYMFVVALRICEK 901
            A++ +  I  KGS+  TAIIEAYG+N  Y++AI++F  M S+G +PNHY F   L ICE+
Sbjct: 612  AKLAFKAIPAKGSMAWTAIIEAYGYNDLYQDAINLFHQMQSDGFIPNHYTFKAVLSICER 671

Query: 902  AGFVDSALRIFNMMIQEYDIKAS 970
            A   D A  IFN+M + Y IKAS
Sbjct: 672  AELADDACLIFNLMSRRYRIKAS 694



 Score =  134 bits (338), Expect = 4e-29
 Identities = 82/300 (27%), Positives = 152/300 (50%), Gaps = 3/300 (1%)
 Frame = +2

Query: 5    GREVHGFVLKRSRYYHNMVFVLAGLINMYCKCGDMVSARRVFYGSHERNAVSWTALISGY 184
            G+++H  +  R     N  F+   L++MY  CG +  AR VF G   ++  +W AL+ G 
Sbjct: 170  GKQIHVHI--RINGLENNEFLRTKLVHMYTSCGSLEDARGVFDGVSSKSVYTWNALLRGN 227

Query: 185  ASCGR--FEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGKEMHAFTVKHCFLP 358
               GR  + +AL + + M++ G++ ++ + +  I   A   A + G + HA  +K+  + 
Sbjct: 228  VISGRRHYREALSTYSEMRELGVELNVYSFSCMIKSFAGATAFRQGLKAHALLIKNGLVD 287

Query: 359  NISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNGSPCDALSVFRSML 538
            +  + TSL+ MY   G I  +  +F ++  R+V+ W A+I  +  N    +AL   R M 
Sbjct: 288  SSILRTSLIDMYFKCGKIKLARLMFEEIVERDVVVWGAMIAGFGHNRLQREALEYLRWMR 347

Query: 539  QTKQRPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLESVPI-VMAEVVKMYGKFRNV 715
            +    P+ V +  IL + GE+G+ K+G EVHA V+K K  S  + + + ++ MY K  ++
Sbjct: 348  REGICPNSVIMTTILPVIGEVGAWKLGREVHAYVVKTKSYSKQVFIQSALIDMYCKCGDM 407

Query: 716  DNARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNGLVPNHYMFVVALRIC 895
             + R V+     + +++ TA++  Y  N + ++A+     M   G  P+       L +C
Sbjct: 408  ASGRQVFYASTERNAVSWTALMSGYVSNGRLDQALRSIAWMQQEGFRPDVVTVATVLPVC 467



 Score = 83.6 bits (205), Expect = 1e-13
 Identities = 56/258 (21%), Positives = 121/258 (46%), Gaps = 2/258 (0%)
 Frame = +2

Query: 140 HERNAVSWTALISGYASCGRFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGK 319
           H +N  +  + I  +A  G+ ++AL  + +  Q+GI  +  T ++ +  C + K+   GK
Sbjct: 112 HTKNPHAIFSDIQRFARQGKLKEALTILDYCDQQGIPVNPTTFSSLLRACVESKSLTHGK 171

Query: 320 EMHAFTVKHCFLPNISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALI--DTYSK 493
           ++H     +    N  + T L+ MY++ G+++ +  +F+ + +++V  W AL+  +  S 
Sbjct: 172 QIHVHIRINGLENNEFLRTKLVHMYTSCGSLEDARGVFDGVSSKSVYTWNALLRGNVISG 231

Query: 494 NGSPCDALSVFRSMLQTKQRPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLESVPIV 673
                +ALS +  M +     +  + + ++       + + G + HA ++K  L    I+
Sbjct: 232 RRHYREALSTYSEMRELGVELNVYSFSCMIKSFAGATAFRQGLKAHALLIKNGLVDSSIL 291

Query: 674 MAEVVKMYGKFRNVDNARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNGL 853
              ++ MY K   +  AR++++ I  +  +   A+I  +G N    EA+     M   G+
Sbjct: 292 RTSLIDMYFKCGKIKLARLMFEEIVERDVVVWGAMIAGFGHNRLQREALEYLRWMRREGI 351

Query: 854 VPNHYMFVVALRICEKAG 907
            PN  +    L +  + G
Sbjct: 352 CPNSVIMTTILPVIGEVG 369


>emb|CAN65544.1| hypothetical protein VITISV_018576 [Vitis vinifera]
          Length = 664

 Score =  395 bits (1014), Expect = e-107
 Identities = 187/323 (57%), Positives = 246/323 (76%)
 Frame = +2

Query: 2    LGREVHGFVLKRSRYYHNMVFVLAGLINMYCKCGDMVSARRVFYGSHERNAVSWTALISG 181
            LGREVH +V+K ++ Y   VF+ + LI+MYCKCGDM S R+VFY S ERNAVSWTAL+SG
Sbjct: 312  LGREVHAYVVK-TKSYSKQVFIQSALIDMYCKCGDMASGRQVFYASTERNAVSWTALMSG 370

Query: 182  YASCGRFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGKEMHAFTVKHCFLPN 361
            Y S GR +QALRSIAWMQQEG +PD+VT+AT +PVCA+++A + GKE+H++ VK+ FLPN
Sbjct: 371  YVSNGRLDQALRSIAWMQQEGFRPDVVTVATVLPVCAELRALRQGKEIHSYAVKNGFLPN 430

Query: 362  ISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNGSPCDALSVFRSMLQ 541
            +SI+TSLM MYS  GN+DYS +LF+ M  RNV++WTA+ID+Y +NG   +A+ VFRSM  
Sbjct: 431  VSIATSLMVMYSKCGNLDYSFKLFDGMDARNVISWTAMIDSYVENGCLHEAVGVFRSMQL 490

Query: 542  TKQRPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLESVPIVMAEVVKMYGKFRNVDN 721
            +K RPD VA+ARILSICGE+  +K+G E+H Q+LK   ES+P V AE++KMYGKF  +  
Sbjct: 491  SKHRPDSVAMARILSICGELRVLKLGKEIHGQILKKDFESIPFVSAEIIKMYGKFGAISK 550

Query: 722  ARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNGLVPNHYMFVVALRICEK 901
            A++ +  I  KGS+  TAIIEAYG+N  Y++AI++F  M S+G +PNHY F   L ICE+
Sbjct: 551  AKLAFKAIPAKGSMAWTAIIEAYGYNDLYQDAINLFHQMQSDGFIPNHYTFKAVLSICER 610

Query: 902  AGFVDSALRIFNMMIQEYDIKAS 970
            A   D A  IFN+M + Y IKAS
Sbjct: 611  AELADDACLIFNLMSRRYRIKAS 633



 Score =  157 bits (396), Expect = 8e-36
 Identities = 93/298 (31%), Positives = 158/298 (53%), Gaps = 1/298 (0%)
 Frame = +2

Query: 5    GREVHGFVLKRSRYYHNMVFVLAGLINMYCKCGDMVSARRVFYGSHERNAVSWTALISGY 184
            G + H  ++K      +++     LI+MY KCG +  AR +F    ER+ V W A+I+G+
Sbjct: 212  GLKAHALLIKNGLVDSSIL--RTSLIDMYFKCGKIKLARLMFEEIVERDVVVWGAMIAGF 269

Query: 185  ASCGRFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGKEMHAFTVK-HCFLPN 361
                   +AL  + WM++EGI P+ V + T +PV  ++ A K G+E+HA+ VK   +   
Sbjct: 270  GHNRLQREALEYLRWMRREGICPNSVIMTTILPVIGEVGAWKLGREVHAYVVKTKSYSKQ 329

Query: 362  ISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNGSPCDALSVFRSMLQ 541
            + I ++L+ MY   G++    ++F     RN ++WTAL+  Y  NG    AL     M Q
Sbjct: 330  VFIQSALIDMYCKCGDMASGRQVFYASTERNAVSWTALMSGYVSNGRLDQALRSIAWMQQ 389

Query: 542  TKQRPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLESVPIVMAEVVKMYGKFRNVDN 721
               RPD V +A +L +C E+ +++ G E+H+  +K        +   ++ MY K  N+D 
Sbjct: 390  EGFRPDVVTVATVLPVCAELRALRQGKEIHSYAVKNGFLPNVSIATSLMVMYSKCGNLDY 449

Query: 722  ARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNGLVPNHYMFVVALRIC 895
            +  ++DG+D +  ++ TA+I++Y  N    EA+ +F SM  +   P+       L IC
Sbjct: 450  SFKLFDGMDARNVISWTAMIDSYVENGCLHEAVGVFRSMQLSKHRPDSVAMARILSIC 507



 Score =  102 bits (254), Expect = 2e-19
 Identities = 61/233 (26%), Positives = 119/233 (51%), Gaps = 1/233 (0%)
 Frame = +2

Query: 200 FEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGKEMHAFTVKHCFLPNISISTS 379
           + +AL + + M++ G++ ++ + +  I   A   A + G + HA  +K+  + +  + TS
Sbjct: 174 YREALSTYSEMRELGVELNVYSFSCMIKSFAGATAFRQGLKAHALLIKNGLVDSSILRTS 233

Query: 380 LMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNGSPCDALSVFRSMLQTKQRPD 559
           L+ MY   G I  +  +F ++  R+V+ W A+I  +  N    +AL   R M +    P+
Sbjct: 234 LIDMYFKCGKIKLARLMFEEIVERDVVVWGAMIAGFGHNRLQREALEYLRWMRREGICPN 293

Query: 560 GVALARILSICGEIGSIKVGTEVHAQVLKMKLESVPI-VMAEVVKMYGKFRNVDNARMVY 736
            V +  IL + GE+G+ K+G EVHA V+K K  S  + + + ++ MY K  ++ + R V+
Sbjct: 294 SVIMTTILPVIGEVGAWKLGREVHAYVVKTKSYSKQVFIQSALIDMYCKCGDMASGRQVF 353

Query: 737 DGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNGLVPNHYMFVVALRIC 895
                + +++ TA++  Y  N + ++A+     M   G  P+       L +C
Sbjct: 354 YASTERNAVSWTALMSGYVSNGRLDQALRSIAWMQQEGFRPDVVTVATVLPVC 406


>gb|EXC35649.1| hypothetical protein L484_001633 [Morus notabilis]
          Length = 647

 Score =  387 bits (994), Expect = e-105
 Identities = 189/323 (58%), Positives = 240/323 (74%)
 Frame = +2

Query: 2    LGREVHGFVLKRSRYYHNMVFVLAGLINMYCKCGDMVSARRVFYGSHERNAVSWTALISG 181
            LGREVH + +K  RY     F+ +GLI+MYCKCGDM + RRVFY   ERNA+ WTALISG
Sbjct: 295  LGREVHAYAVKTKRYA-KQTFIQSGLIDMYCKCGDMENGRRVFYRLKERNAICWTALISG 353

Query: 182  YASCGRFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGKEMHAFTVKHCFLPN 361
            Y + GR EQALRSI WMQQEGI+PD+VT+AT +P+CA+++A KPGKE+HA+ VK+CFLPN
Sbjct: 354  YVANGRLEQALRSIIWMQQEGIRPDVVTVATVVPICAELRALKPGKEIHAYAVKNCFLPN 413

Query: 362  ISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNGSPCDALSVFRSMLQ 541
            +SI +SLM MYS  G +DYS RLF  M  RNV+ WTA+ID+Y +N    +ALSV RSM+ 
Sbjct: 414  VSIVSSLMMMYSKCGVLDYSVRLFEGMEQRNVILWTAMIDSYVENRHLDEALSVIRSMVL 473

Query: 542  TKQRPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLESVPIVMAEVVKMYGKFRNVDN 721
            +K RPD VA+ R+L IC E+ S+K G E+H QVLK   ESV  V AE+VKMYG+   +D+
Sbjct: 474  SKHRPDSVAIGRMLCICNELKSLKFGKEIHGQVLKRNFESVHFVSAEIVKMYGRCGVIDD 533

Query: 722  ARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNGLVPNHYMFVVALRICEK 901
            A++V+D I  KGS+T TAIIEAY  N  YE+AI +F  M   G  PN++ F VAL IC +
Sbjct: 534  AKLVFDTIRVKGSMTWTAIIEAYRDNGLYEDAIDLFYEMRDKGFTPNNFTFQVALSICNE 593

Query: 902  AGFVDSALRIFNMMIQEYDIKAS 970
            AGFVD A RIFN+M + Y++KAS
Sbjct: 594  AGFVDDACRIFNLMTRSYNVKAS 616



 Score =  130 bits (326), Expect = 1e-27
 Identities = 83/300 (27%), Positives = 147/300 (49%), Gaps = 3/300 (1%)
 Frame = +2

Query: 5   GREVHGFVLKRSRYYHNMVFVLAGLINMYCKCGDMVSARRVFYGSHERNAVSWTALISGY 184
           G++VH F+  R        F+   L++MY  CG +  A  +F  S  R+   W AL+ G 
Sbjct: 92  GKQVHAFI--RINGLDKNEFLRTKLVHMYTSCGSVDDANNLFDESPSRSVYPWNALLRGN 149

Query: 185 ASCG--RFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGKEMHAFTVKHCFLP 358
              G  R+  AL +   M+  GI+ ++ + ++ I   A   A   G + HA  +K+  + 
Sbjct: 150 VISGGRRYRDALSTYYQMRALGIEMNVYSFSSVIKSLAGASALLQGLKTHALLIKNGLVG 209

Query: 359 NISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNGSPCDALSVFRSML 538
           +  + TSL+ MY   G I  + ++F ++  R+++AW A+I  ++ N     AL   R M+
Sbjct: 210 SAMLRTSLIDMYFKCGKIKLARQVFEEIVERDIVAWGAMISGFAHNRLQWQALDYTRRMV 269

Query: 539 QTKQRPDGVALARILSICGEIGSIKVGTEVHAQVLKMK-LESVPIVMAEVVKMYGKFRNV 715
               + + V L  IL + GE+ + K+G EVHA  +K K       + + ++ MY K  ++
Sbjct: 270 DEGIKLNSVILTIILPVIGELLARKLGREVHAYAVKTKRYAKQTFIQSGLIDMYCKCGDM 329

Query: 716 DNARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNGLVPNHYMFVVALRIC 895
           +N R V+  +  + ++  TA+I  Y  N + E+A+     M   G+ P+       + IC
Sbjct: 330 ENGRRVFYRLKERNAICWTALISGYVANGRLEQALRSIIWMQQEGIRPDVVTVATVVPIC 389



 Score = 92.8 bits (229), Expect = 2e-16
 Identities = 62/253 (24%), Positives = 118/253 (46%), Gaps = 2/253 (0%)
 Frame = +2

Query: 140 HERNAVSWTALISGYASCGRFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGK 319
           H +N  +  + I  +A   +  QAL  + +M Q+GI  +  T A  I  C + K+   GK
Sbjct: 34  HSKNPRAVYSDIQRFARQNKLSQALTILDYMDQQGIPVNPTTFAALIAACVRTKSLDHGK 93

Query: 320 EMHAFTVKHCFLPNISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALI--DTYSK 493
           ++HAF   +    N  + T L+ MY++ G++D +  LF++ P+R+V  W AL+  +  S 
Sbjct: 94  QVHAFIRINGLDKNEFLRTKLVHMYTSCGSVDDANNLFDESPSRSVYPWNALLRGNVISG 153

Query: 494 NGSPCDALSVFRSMLQTKQRPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLESVPIV 673
                DALS +  M       +  + + ++       ++  G + HA ++K  L    ++
Sbjct: 154 GRRYRDALSTYYQMRALGIEMNVYSFSSVIKSLAGASALLQGLKTHALLIKNGLVGSAML 213

Query: 674 MAEVVKMYGKFRNVDNARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNGL 853
              ++ MY K   +  AR V++ I  +  +   A+I  +  N    +A+     M+  G+
Sbjct: 214 RTSLIDMYFKCGKIKLARQVFEEIVERDIVAWGAMISGFAHNRLQWQALDYTRRMVDEGI 273

Query: 854 VPNHYMFVVALRI 892
             N  +  + L +
Sbjct: 274 KLNSVILTIILPV 286


>gb|EOY03311.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
            cacao]
          Length = 683

 Score =  382 bits (980), Expect = e-103
 Identities = 178/323 (55%), Positives = 244/323 (75%)
 Frame = +2

Query: 2    LGREVHGFVLKRSRYYHNMVFVLAGLINMYCKCGDMVSARRVFYGSHERNAVSWTALISG 181
            LGRE+H +V+K   Y   +V + +GL++MYCKCGDM S RRVFY S ERNA+SWTAL+SG
Sbjct: 331  LGREIHAYVVKTKSYSKQLV-IQSGLVDMYCKCGDMDSGRRVFYCSRERNAISWTALMSG 389

Query: 182  YASCGRFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGKEMHAFTVKHCFLPN 361
            Y S GR  QALRS+ WMQQEG KPD+VT+AT +PVCA+++A   GKE+HA+ VK+CF PN
Sbjct: 390  YVSNGRLNQALRSVVWMQQEGFKPDVVTVATILPVCAELRALSHGKEIHAYAVKNCFFPN 449

Query: 362  ISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNGSPCDALSVFRSMLQ 541
            +SI TSLM MYS  G +DYS +LFN M  RNV++WTA+I++Y K+G   +ALSVFRSM  
Sbjct: 450  VSIVTSLMIMYSKCGVLDYSLKLFNGMEARNVISWTAMIESYVKSGHLHEALSVFRSMQF 509

Query: 542  TKQRPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLESVPIVMAEVVKMYGKFRNVDN 721
            +K RPD VA+AR+L++C E+ ++K+G E+H QVLK   ES+P V A +VKMYG    +  
Sbjct: 510  SKHRPDSVAMARMLNVCSELRAVKLGKEIHGQVLKKDFESIPFVSAGIVKMYGSCGLIST 569

Query: 722  ARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNGLVPNHYMFVVALRICEK 901
            A++V++ +  KG++T TAIIEAYG+N   E+AI +F  M S+  +PNH+ F V L +C +
Sbjct: 570  AKLVFEAVPVKGTMTWTAIIEAYGYNDLCEDAISLFHQMASDDFIPNHFTFKVVLSVCRQ 629

Query: 902  AGFVDSALRIFNMMIQEYDIKAS 970
            AGFVD A ++F++M ++Y++KAS
Sbjct: 630  AGFVDRACQLFSLMTRKYELKAS 652



 Score =  141 bits (355), Expect = 4e-31
 Identities = 87/300 (29%), Positives = 151/300 (50%), Gaps = 3/300 (1%)
 Frame = +2

Query: 5    GREVHGFVLKRSRYYHNMVFVLAGLINMYCKCGDMVSARRVFYGSHERNAVSWTALISGY 184
            GR++H  +  R+    N  F+ A L +MY  CG +  A RVF     +N  SW AL+ G 
Sbjct: 128  GRQIHSHI--RTNGLENNEFLRAKLAHMYTSCGSIDDALRVFDECTSKNVHSWNALLRGT 185

Query: 185  ASCG--RFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGKEMHAFTVKHCFLP 358
               G  R+   L + + M+   +K ++ T +  +   A   A + G + HA  +K+ F+ 
Sbjct: 186  VISGKKRYLDVLSTYSEMRLLAVKLNVYTFSAVLKSFAGASAFRQGLKTHALLIKNGFID 245

Query: 359  NISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNGSPCDALSVFRSML 538
            +  + T L+  Y   G I  +CR+  ++P R+++ W A+I  ++ N    +ALS  R M+
Sbjct: 246  SSMLRTGLIDFYFKCGKIKLACRVLEEIPERDIVLWGAMIAGFAHNRMQKEALSYVRWMI 305

Query: 539  QTKQRPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLESVPIVM-AEVVKMYGKFRNV 715
                 P+ V L  IL + GE+ + K+G E+HA V+K K  S  +V+ + +V MY K  ++
Sbjct: 306  SAGIYPNSVILTTILPVIGEVWARKLGREIHAYVVKTKSYSKQLVIQSGLVDMYCKCGDM 365

Query: 716  DNARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNGLVPNHYMFVVALRIC 895
            D+ R V+     + +++ TA++  Y  N +  +A+     M   G  P+       L +C
Sbjct: 366  DSGRRVFYCSRERNAISWTALMSGYVSNGRLNQALRSVVWMQQEGFKPDVVTVATILPVC 425



 Score = 79.3 bits (194), Expect = 2e-12
 Identities = 54/253 (21%), Positives = 114/253 (45%), Gaps = 2/253 (0%)
 Frame = +2

Query: 140 HERNAVSWTALISGYASCGRFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGK 319
           H +N  +    I  +A   + ++AL  + ++ Q+GI  +  T ++ +  C + K+   G+
Sbjct: 70  HTKNPHAIYKDIQRFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLAACVRSKSLADGR 129

Query: 320 EMHAFTVKHCFLPNISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNG 499
           ++H+    +    N  +   L  MY++ G+ID + R+F++  ++NV +W AL+     +G
Sbjct: 130 QIHSHIRTNGLENNEFLRAKLAHMYTSCGSIDDALRVFDECTSKNVHSWNALLRGTVISG 189

Query: 500 SP--CDALSVFRSMLQTKQRPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLESVPIV 673
                D LS +  M     + +    + +L       + + G + HA ++K       ++
Sbjct: 190 KKRYLDVLSTYSEMRLLAVKLNVYTFSAVLKSFAGASAFRQGLKTHALLIKNGFIDSSML 249

Query: 674 MAEVVKMYGKFRNVDNARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNGL 853
              ++  Y K   +  A  V + I  +  +   A+I  +  N   +EA+     M+S G+
Sbjct: 250 RTGLIDFYFKCGKIKLACRVLEEIPERDIVLWGAMIAGFAHNRMQKEALSYVRWMISAGI 309

Query: 854 VPNHYMFVVALRI 892
            PN  +    L +
Sbjct: 310 YPNSVILTTILPV 322


>ref|XP_004308527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 683

 Score =  379 bits (974), Expect = e-103
 Identities = 184/323 (56%), Positives = 242/323 (74%)
 Frame = +2

Query: 2    LGREVHGFVLKRSRYYHNMVFVLAGLINMYCKCGDMVSARRVFYGSHERNAVSWTALISG 181
            LG+E H +V+K ++ Y    FV + LI+MYCKCGDM   RRVFY S ERNA+ WTAL+SG
Sbjct: 331  LGQEAHAYVVK-TKSYLRQAFVQSALIDMYCKCGDMEMGRRVFYSSVERNAICWTALMSG 389

Query: 182  YASCGRFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGKEMHAFTVKHCFLPN 361
            YA+ GR EQALRS+ WMQQEG KPD+VT+ATA+PVCA++K  K GKE+HA+ VK+CFLPN
Sbjct: 390  YAANGRLEQALRSVIWMQQEGFKPDVVTVATALPVCAELKDLKRGKEIHAYAVKNCFLPN 449

Query: 362  ISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNGSPCDALSVFRSMLQ 541
            +SI +SLM MYS  G +DYS RLF+ M  RNV+ WTA+ID+  +NG    AL V RSML 
Sbjct: 450  VSIVSSLMVMYSKCGVLDYSIRLFDGMEQRNVITWTAMIDSLVENGCLDGALGVIRSMLL 509

Query: 542  TKQRPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLESVPIVMAEVVKMYGKFRNVDN 721
            +K RPD VA++R+L+ICG + ++K+G E+HAQVLK   +SVP V AE+VKMYG+   +D+
Sbjct: 510  SKHRPDSVAMSRMLAICGGLKNLKLGKEIHAQVLKKNFDSVPFVSAELVKMYGRCAAIDH 569

Query: 722  ARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNGLVPNHYMFVVALRICEK 901
            A+  +D I  KGS+T TAIIEAYG+   Y+EAI +FD M S  L PN++ F V L IC++
Sbjct: 570  AKSFFDTIPVKGSMTRTAIIEAYGYAGMYQEAISLFDQMRSKDLTPNNFTFQVVLSICDR 629

Query: 902  AGFVDSALRIFNMMIQEYDIKAS 970
            AGFVD A RIF+++ + Y I+ +
Sbjct: 630  AGFVDDACRIFHLISRRYKIRVT 652



 Score =  123 bits (308), Expect = 1e-25
 Identities = 78/300 (26%), Positives = 145/300 (48%), Gaps = 3/300 (1%)
 Frame = +2

Query: 5    GREVHGFVLKRSRYYHNMVFVLAGLINMYCKCGDMVSARRVFYGSHERNAVSWTALISGY 184
            G+++H ++        +  F+   L+NMY   G +  A  +F     +N  +W AL+ G 
Sbjct: 128  GKKIHKYIWING--LESSEFLRQKLVNMYTSFGAVDDAHHLFDQMPGKNVYTWNALLRGT 185

Query: 185  ASCG--RFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGKEMHAFTVKHCFLP 358
               G  R+   L + + M++ G++ ++ + +  I   A   A   G + HA  VK+  + 
Sbjct: 186  VVAGGKRYRDVLETYSEMRELGVEMNVYSFSNVIKSFAGASALSQGLKTHALLVKNGLIG 245

Query: 359  NISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNGSPCDALSVFRSML 538
            ++ + TSL+ MY   G I  +  +F ++  R+V+ W A+I  ++ N    +AL   R M+
Sbjct: 246  SVIVRTSLVDMYFKCGKIKLARLVFEEVGERDVVLWGAMIAGFAHNRLRKEALQHLRIMV 305

Query: 539  QTKQRPDGVALARILSICGEIGSIKVGTEVHAQVLKMK-LESVPIVMAEVVKMYGKFRNV 715
            +    P+ V L  +L + GE+ + K+G E HA V+K K       V + ++ MY K  ++
Sbjct: 306  EEGIMPNSVILTSVLPVIGELSARKLGQEAHAYVVKTKSYLRQAFVQSALIDMYCKCGDM 365

Query: 716  DNARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNGLVPNHYMFVVALRIC 895
            +  R V+     + ++  TA++  Y  N + E+A+     M   G  P+      AL +C
Sbjct: 366  EMGRRVFYSSVERNAICWTALMSGYAANGRLEQALRSVIWMQQEGFKPDVVTVATALPVC 425



 Score = 90.5 bits (223), Expect = 9e-16
 Identities = 58/253 (22%), Positives = 117/253 (46%), Gaps = 2/253 (0%)
 Frame = +2

Query: 140 HERNAVSWTALISGYASCGRFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGK 319
           H +N  +    I  +A+  +  +AL  + ++ Q+GI  +  T +  I  C + ++   GK
Sbjct: 70  HTKNPRAVYKDIQRFAAQNKLNEALTILDYLDQQGIPVNATTFSHLITACVRTRSLDTGK 129

Query: 320 EMHAFTVKHCFLPNISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALI-DTYSKN 496
           ++H +   +    +  +   L+ MY++ G +D +  LF++MP +NV  W AL+  T    
Sbjct: 130 KIHKYIWINGLESSEFLRQKLVNMYTSFGAVDDAHHLFDQMPGKNVYTWNALLRGTVVAG 189

Query: 497 GSPC-DALSVFRSMLQTKQRPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLESVPIV 673
           G    D L  +  M +     +  + + ++       ++  G + HA ++K  L    IV
Sbjct: 190 GKRYRDVLETYSEMRELGVEMNVYSFSNVIKSFAGASALSQGLKTHALLVKNGLIGSVIV 249

Query: 674 MAEVVKMYGKFRNVDNARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNGL 853
              +V MY K   +  AR+V++ +  +  +   A+I  +  N   +EA+     M+  G+
Sbjct: 250 RTSLVDMYFKCGKIKLARLVFEEVGERDVVLWGAMIAGFAHNRLRKEALQHLRIMVEEGI 309

Query: 854 VPNHYMFVVALRI 892
           +PN  +    L +
Sbjct: 310 MPNSVILTSVLPV 322


>ref|XP_002441982.1| hypothetical protein SORBIDRAFT_08g006380 [Sorghum bicolor]
            gi|241942675|gb|EES15820.1| hypothetical protein
            SORBIDRAFT_08g006380 [Sorghum bicolor]
          Length = 697

 Score =  378 bits (971), Expect = e-102
 Identities = 178/323 (55%), Positives = 245/323 (75%)
 Frame = +2

Query: 2    LGREVHGFVLKRSRYYHNMVFVLAGLINMYCKCGDMVSARRVFYGSHERNAVSWTALISG 181
            LGREVHGFVLK+     ++  V AGL++MYCKCGDM+S RRVFY S +RNAVSWTAL+SG
Sbjct: 332  LGREVHGFVLKKFGDRKDVAKVQAGLVDMYCKCGDMISGRRVFYSSKKRNAVSWTALMSG 391

Query: 182  YASCGRFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGKEMHAFTVKHCFLPN 361
            YAS GR +QALR IAWMQQEGI+PD++ + T +PVC K+KA + GK++HA+ ++  FLPN
Sbjct: 392  YASNGRPDQALRCIAWMQQEGIRPDLIAVGTVLPVCTKLKALREGKQLHAYALRRWFLPN 451

Query: 362  ISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNGSPCDALSVFRSMLQ 541
            +S+ TSL+TMY    +++YS R+F+ M  + V AWTAL+D Y KNG P  A+++FRSML 
Sbjct: 452  VSLCTSLITMYGTCDHLEYSHRVFHDMDKKTVQAWTALVDAYLKNGDPLTAINLFRSMLL 511

Query: 542  TKQRPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLESVPIVMAEVVKMYGKFRNVDN 721
            T +RPD VA+ R+LS C +IG++++G EVH QVLK+++E +P+V AEVV MYG+  ++  
Sbjct: 512  TNRRPDAVAITRMLSACCDIGALRLGKEVHGQVLKLRMEQLPLVAAEVVSMYGRCGDLKA 571

Query: 722  ARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNGLVPNHYMFVVALRICEK 901
            A+ V++  ++KGS+TCTAIIEAY  N +++EA+ +F  MLSN  VP    F V L+IC+ 
Sbjct: 572  AQRVFNRTESKGSMTCTAIIEAYAVNQRHKEALQLFTWMLSNKFVPTKATFNVVLKICDA 631

Query: 902  AGFVDSALRIFNMMIQEYDIKAS 970
            AG  D AL IFN M+QEY+++ S
Sbjct: 632  AGLHDEALGIFNSMVQEYNLETS 654



 Score =  149 bits (376), Expect = 2e-33
 Identities = 84/279 (30%), Positives = 144/279 (51%), Gaps = 2/279 (0%)
 Frame = +2

Query: 65   VLAGLINMYCKCGDMVSARRVFYGSHERNAVSWTALISGYASCGRFEQALRSIAWMQQEG 244
            ++ GL+++Y KCG +  A RVF    ER+ V+W A I+G+A  G   +AL    WM ++G
Sbjct: 250  LMTGLMDVYFKCGKVKLAVRVFEEMPERDVVAWGAAIAGFAHKGMKREALEHFRWMVEDG 309

Query: 245  IKPDIVTIATAIPVCAKMKASKPGKEMHAFTVKHC--FLPNISISTSLMTMYSALGNIDY 418
            +K + V + + +PV  +++A   G+E+H F +K          +   L+ MY   G++  
Sbjct: 310  VKVNCVVLTSIVPVIGELRARNLGREVHGFVLKKFGDRKDVAKVQAGLVDMYCKCGDMIS 369

Query: 419  SCRLFNKMPNRNVLAWTALIDTYSKNGSPCDALSVFRSMLQTKQRPDGVALARILSICGE 598
              R+F     RN ++WTAL+  Y+ NG P  AL     M Q   RPD +A+  +L +C +
Sbjct: 370  GRRVFYSSKKRNAVSWTALMSGYASNGRPDQALRCIAWMQQEGIRPDLIAVGTVLPVCTK 429

Query: 599  IGSIKVGTEVHAQVLKMKLESVPIVMAEVVKMYGKFRNVDNARMVYDGIDNKGSLTCTAI 778
            + +++ G ++HA  L+        +   ++ MYG   +++ +  V+  +D K     TA+
Sbjct: 430  LKALREGKQLHAYALRRWFLPNVSLCTSLITMYGTCDHLEYSHRVFHDMDKKTVQAWTAL 489

Query: 779  IEAYGFNSQYEEAIHIFDSMLSNGLVPNHYMFVVALRIC 895
            ++AY  N     AI++F SML     P+       L  C
Sbjct: 490  VDAYLKNGDPLTAINLFRSMLLTNRRPDAVAITRMLSAC 528


>ref|XP_004978285.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
            chloroplastic-like [Setaria italica]
          Length = 689

 Score =  376 bits (966), Expect = e-102
 Identities = 178/323 (55%), Positives = 244/323 (75%)
 Frame = +2

Query: 2    LGREVHGFVLKRSRYYHNMVFVLAGLINMYCKCGDMVSARRVFYGSHERNAVSWTALISG 181
            LGRE+HGFV+K+     ++  V AGL++MYCKCGDM+S RRVFY S +RNAVSWTAL+SG
Sbjct: 324  LGREIHGFVVKKFGDRKDVAKVQAGLVDMYCKCGDMISGRRVFYSSKKRNAVSWTALMSG 383

Query: 182  YASCGRFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGKEMHAFTVKHCFLPN 361
            YAS GR +QALR IAWMQQEGI+PD++ + T +PVC K+KA + GK++HA+ ++  FLPN
Sbjct: 384  YASNGRPDQALRCIAWMQQEGIRPDLIAVGTVLPVCTKLKALREGKQLHAYALRRWFLPN 443

Query: 362  ISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNGSPCDALSVFRSMLQ 541
            +S+ TSL+TMY +   ++YS R+F+ M  + V AWTAL+D Y KNG P  A+ +FRSML 
Sbjct: 444  VSLCTSLITMYGSCDCLEYSHRVFHDMDKKTVQAWTALVDAYLKNGDPLTAVDLFRSMLL 503

Query: 542  TKQRPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLESVPIVMAEVVKMYGKFRNVDN 721
            T +RPD VA+ R+LS C +IG++K+G EVH QVLK+++E +P+V AE+V MYG   ++  
Sbjct: 504  TNRRPDAVAITRMLSACHDIGALKLGKEVHGQVLKLRMEPLPLVAAELVNMYGTCGDLKA 563

Query: 722  ARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNGLVPNHYMFVVALRICEK 901
            A+MV++  ++KGSLTCT+IIEAY  N +++EA+ +F  MLSN  VP    F V LRIC+ 
Sbjct: 564  AQMVFNRTESKGSLTCTSIIEAYAINQKHKEALDLFAWMLSNKFVPTKATFDVVLRICDA 623

Query: 902  AGFVDSALRIFNMMIQEYDIKAS 970
            AG  D AL IF+ M+QEY ++AS
Sbjct: 624  AGLHDEALEIFSFMVQEYKLEAS 646



 Score =  147 bits (371), Expect = 6e-33
 Identities = 84/283 (29%), Positives = 142/283 (50%), Gaps = 2/283 (0%)
 Frame = +2

Query: 65   VLAGLINMYCKCGDMVSARRVFYGSHERNAVSWTALISGYASCGRFEQALRSIAWMQQEG 244
            ++ GL+++Y KCG +  A RV     ER+ V+W A I+G+A  G   +AL    WM ++G
Sbjct: 242  LMTGLMDVYFKCGKVKLAVRVLEEMPERDVVAWGAAIAGFAHKGMKREALEHFRWMVEDG 301

Query: 245  IKPDIVTIATAIPVCAKMKASKPGKEMHAFTVKHC--FLPNISISTSLMTMYSALGNIDY 418
            +K + V + + +PV  +++A   G+E+H F VK          +   L+ MY   G++  
Sbjct: 302  VKVNCVVLTSIVPVIGELRARNLGREIHGFVVKKFGDRKDVAKVQAGLVDMYCKCGDMIS 361

Query: 419  SCRLFNKMPNRNVLAWTALIDTYSKNGSPCDALSVFRSMLQTKQRPDGVALARILSICGE 598
              R+F     RN ++WTAL+  Y+ NG P  AL     M Q   RPD +A+  +L +C +
Sbjct: 362  GRRVFYSSKKRNAVSWTALMSGYASNGRPDQALRCIAWMQQEGIRPDLIAVGTVLPVCTK 421

Query: 599  IGSIKVGTEVHAQVLKMKLESVPIVMAEVVKMYGKFRNVDNARMVYDGIDNKGSLTCTAI 778
            + +++ G ++HA  L+        +   ++ MYG    ++ +  V+  +D K     TA+
Sbjct: 422  LKALREGKQLHAYALRRWFLPNVSLCTSLITMYGSCDCLEYSHRVFHDMDKKTVQAWTAL 481

Query: 779  IEAYGFNSQYEEAIHIFDSMLSNGLVPNHYMFVVALRICEKAG 907
            ++AY  N     A+ +F SML     P+       L  C   G
Sbjct: 482  VDAYLKNGDPLTAVDLFRSMLLTNRRPDAVAITRMLSACHDIG 524


>gb|EMJ21762.1| hypothetical protein PRUPE_ppa003304mg [Prunus persica]
          Length = 586

 Score =  375 bits (964), Expect = e-101
 Identities = 184/323 (56%), Positives = 236/323 (73%)
 Frame = +2

Query: 2    LGREVHGFVLKRSRYYHNMVFVLAGLINMYCKCGDMVSARRVFYGSHERNAVSWTALISG 181
            LG+EVH FVLK ++ Y   +F+ +GLI+MYCKCGDM   RRVFY S ERNA+ WTAL+SG
Sbjct: 235  LGQEVHAFVLK-TKSYSKQIFIQSGLIDMYCKCGDMDMGRRVFYHSKERNAICWTALMSG 293

Query: 182  YASCGRFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGKEMHAFTVKHCFLPN 361
            Y + GR EQALRS+ WMQQEG KPD+VT+AT +PVCA++K  K GKE+HA+ VK+CFLPN
Sbjct: 294  YVANGRPEQALRSVIWMQQEGFKPDLVTVATVLPVCAELKDLKRGKEIHAYAVKNCFLPN 353

Query: 362  ISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNGSPCDALSVFRSMLQ 541
            +SI +SLM MYS  G   YS RLF+ M  RNV+ WTA+ID+Y  NG   +AL V RSML 
Sbjct: 354  VSIISSLMVMYSKCGIFKYSRRLFDGMEQRNVILWTAMIDSYIDNGCLYEALGVIRSMLL 413

Query: 542  TKQRPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLESVPIVMAEVVKMYGKFRNVDN 721
            +K RPD VA ARIL+IC  + ++K+G E+H QVLK   ES+P V +E+VKMYG    VD+
Sbjct: 414  SKHRPDSVATARILTICNGLKNLKLGKEIHGQVLKKDFESIPFVASEIVKMYGHCGAVDH 473

Query: 722  ARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNGLVPNHYMFVVALRICEK 901
            A+  ++ I  KGS+T TAIIEAY +N  Y +AI +FD M S    PNH+ F V L IC++
Sbjct: 474  AKSAFNIIPVKGSMTWTAIIEAYAYNGMYRDAIDLFDEMRSKDFTPNHFTFQVVLSICDR 533

Query: 902  AGFVDSALRIFNMMIQEYDIKAS 970
            AGFV+ A RIF++M + Y +K S
Sbjct: 534  AGFVNDASRIFHLMSRVYKVKVS 556



 Score =  133 bits (334), Expect = 1e-28
 Identities = 84/300 (28%), Positives = 150/300 (50%), Gaps = 3/300 (1%)
 Frame = +2

Query: 5   GREVHGFVLKRSRYYHNMVFVLAGLINMYCKCGDMVSARRVFYGSHERNAVSWTALISGY 184
           G+++H  +  R     +  F+   L++MY   G +  A+++F  S  ++  SW AL+ G 
Sbjct: 32  GKQIHTHI--RINGLESNDFIRTKLVHMYTSFGSVEHAQQLFDESSSKSVYSWNALLRGT 89

Query: 185 ASCG--RFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGKEMHAFTVKHCFLP 358
              G  R+   LR+   M+  G++ ++ + ++ +   A   A   G + HA  VK+ F+ 
Sbjct: 90  VISGGRRYRDVLRTYTEMRALGLELNVYSFSSVMKSFAGASALSQGLKTHALLVKNGFID 149

Query: 359 NISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNGSPCDALSVFRSML 538
           +  + TSL+ +Y   G I  + R+F +   R+V+ W  +I  ++ N    +AL   R M+
Sbjct: 150 SSIVRTSLVDLYFKCGKIKLAYRVFEEFGERDVVVWGTMIAGFAHNRRQREALEYARMMV 209

Query: 539 QTKQRPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLESVPI-VMAEVVKMYGKFRNV 715
               RP+ V L  IL + G++G+ K+G EVHA VLK K  S  I + + ++ MY K  ++
Sbjct: 210 DEGIRPNSVILTSILPVIGDVGARKLGQEVHAFVLKTKSYSKQIFIQSGLIDMYCKCGDM 269

Query: 716 DNARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNGLVPNHYMFVVALRIC 895
           D  R V+     + ++  TA++  Y  N + E+A+     M   G  P+       L +C
Sbjct: 270 DMGRRVFYHSKERNAICWTALMSGYVANGRPEQALRSVIWMQQEGFKPDLVTVATVLPVC 329



 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 47/226 (20%), Positives = 99/226 (43%), Gaps = 2/226 (0%)
 Frame = +2

Query: 236 QEGIKPDIVTIATAIPVCAKMKASKPGKEMHAFTVKHCFLPNISISTSLMTMYSALGNID 415
           Q+GI  +  T ++ I  C + ++   GK++H     +    N  I T L+ MY++ G+++
Sbjct: 6   QQGIPVNATTFSSLIAACVRTRSEDHGKQIHTHIRINGLESNDFIRTKLVHMYTSFGSVE 65

Query: 416 YSCRLFNKMPNRNVLAWTALI--DTYSKNGSPCDALSVFRSMLQTKQRPDGVALARILSI 589
           ++ +LF++  +++V +W AL+     S      D L  +  M       +  + + ++  
Sbjct: 66  HAQQLFDESSSKSVYSWNALLRGTVISGGRRYRDVLRTYTEMRALGLELNVYSFSSVMKS 125

Query: 590 CGEIGSIKVGTEVHAQVLKMKLESVPIVMAEVVKMYGKFRNVDNARMVYDGIDNKGSLTC 769
                ++  G + HA ++K       IV   +V +Y K   +  A  V++    +  +  
Sbjct: 126 FAGASALSQGLKTHALLVKNGFIDSSIVRTSLVDLYFKCGKIKLAYRVFEEFGERDVVVW 185

Query: 770 TAIIEAYGFNSQYEEAIHIFDSMLSNGLVPNHYMFVVALRICEKAG 907
             +I  +  N +  EA+     M+  G+ PN  +    L +    G
Sbjct: 186 GTMIAGFAHNRRQREALEYARMMVDEGIRPNSVILTSILPVIGDVG 231


>gb|EEC69001.1| hypothetical protein OsI_37782 [Oryza sativa Indica Group]
          Length = 1322

 Score =  375 bits (963), Expect = e-101
 Identities = 178/323 (55%), Positives = 244/323 (75%)
 Frame = +2

Query: 2    LGREVHGFVLKRSRYYHNMVFVLAGLINMYCKCGDMVSARRVFYGSHERNAVSWTALISG 181
            LGRE+HGFVLK+ ++  ++  + AGL++MYCKCGDMVS RRVFY + +RN VSWTAL+SG
Sbjct: 293  LGREIHGFVLKKFQHRKDVGNIQAGLVDMYCKCGDMVSGRRVFYSAKKRNVVSWTALMSG 352

Query: 182  YASCGRFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGKEMHAFTVKHCFLPN 361
            YA  GR +QALR I WMQQEGI+PD++ + T +PVC K+KA + GKE+HA+ ++  FLPN
Sbjct: 353  YACNGRPDQALRCILWMQQEGIRPDLIAVGTVLPVCTKLKALREGKELHAYALRRWFLPN 412

Query: 362  ISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNGSPCDALSVFRSMLQ 541
            +S+ TSL+TMY    + DYS R+F+ M  + V AWTAL+D Y KNG P  A+ VFRSML 
Sbjct: 413  VSLCTSLITMYGTCSHSDYSQRVFHVMDKKTVQAWTALVDAYLKNGDPSTAVDVFRSMLL 472

Query: 542  TKQRPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLESVPIVMAEVVKMYGKFRNVDN 721
            + +RPD VA++R+LS C +IG+ K+G E+H Q LK+++E +P+V A +V MYG   ++  
Sbjct: 473  SNRRPDAVAISRMLSACRDIGASKLGKELHGQALKLRMEPLPLVAAGLVSMYGTCGDLKA 532

Query: 722  ARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNGLVPNHYMFVVALRICEK 901
            A+ V++ I++KGSLTCTAIIEAY  N +++EA+ +F  MLSN  VPN+  F V LRICE 
Sbjct: 533  AQRVFNRIESKGSLTCTAIIEAYAINHRHKEALELFAWMLSNRFVPNNGTFDVLLRICEA 592

Query: 902  AGFVDSALRIFNMMIQEYDIKAS 970
            AG  D AL+IFN M+QEY+++AS
Sbjct: 593  AGLHDEALQIFNSMVQEYNLEAS 615



 Score =  152 bits (385), Expect = 1e-34
 Identities = 91/299 (30%), Positives = 153/299 (51%), Gaps = 2/299 (0%)
 Frame = +2

Query: 17   HGFVLKRSRYYHNMVFVLAGLINMYCKCGDMVSARRVFYGSHERNAVSWTALISGYASCG 196
            H  ++K + Y      ++ GL+++Y KCG +  A  VF    ER+ V+W A+I+G+A  G
Sbjct: 196  HAMLIKNA-YAGAPRMLMTGLMDLYFKCGKVKPAVMVFEEMPERDVVAWGAVIAGFAHKG 254

Query: 197  RFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGKEMHAFTVKHCFLPNI--SI 370
               +AL    WM ++GIK + V + + +PV  +++A   G+E+H F +K         +I
Sbjct: 255  MKREALEHFRWMVEDGIKVNSVVLTSVVPVIGELRARNLGREIHGFVLKKFQHRKDVGNI 314

Query: 371  STSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNGSPCDALSVFRSMLQTKQ 550
               L+ MY   G++    R+F     RNV++WTAL+  Y+ NG P  AL     M Q   
Sbjct: 315  QAGLVDMYCKCGDMVSGRRVFYSAKKRNVVSWTALMSGYACNGRPDQALRCILWMQQEGI 374

Query: 551  RPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLESVPIVMAEVVKMYGKFRNVDNARM 730
            RPD +A+  +L +C ++ +++ G E+HA  L+        +   ++ MYG   + D ++ 
Sbjct: 375  RPDLIAVGTVLPVCTKLKALREGKELHAYALRRWFLPNVSLCTSLITMYGTCSHSDYSQR 434

Query: 731  VYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNGLVPNHYMFVVALRICEKAG 907
            V+  +D K     TA+++AY  N     A+ +F SML +   P+       L  C   G
Sbjct: 435  VFHVMDKKTVQAWTALVDAYLKNGDPSTAVDVFRSMLLSNRRPDAVAISRMLSACRDIG 493


>ref|XP_004156247.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
            chloroplastic-like [Cucumis sativus]
          Length = 716

 Score =  374 bits (960), Expect = e-101
 Identities = 180/323 (55%), Positives = 240/323 (74%)
 Frame = +2

Query: 2    LGREVHGFVLKRSRYYHNMVFVLAGLINMYCKCGDMVSARRVFYGSHERNAVSWTALISG 181
            LG+EVH +V+K ++ Y   +F+ + LI+MYCKCGD+ S R VFY S ERNA+ WTAL+SG
Sbjct: 336  LGQEVHAYVIK-TKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSG 394

Query: 182  YASCGRFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGKEMHAFTVKHCFLPN 361
            YA  GR EQA+RS+ WMQQEG +PDIVT+AT +PVCA+++A +PGKE+HA+ +K+CFLPN
Sbjct: 395  YALNGRLEQAVRSVIWMQQEGFRPDIVTVATILPVCAQLRALRPGKEIHAYAMKNCFLPN 454

Query: 362  ISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNGSPCDALSVFRSMLQ 541
            +SI +SLM MYS  G +DY+ +LFN M  RNV+ WTA+ID+Y +N  P +A+ +FR+M  
Sbjct: 455  VSIVSSLMVMYSKCGVMDYTLKLFNGMEQRNVILWTAMIDSYIENQCPHEAIDIFRAMQL 514

Query: 542  TKQRPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLESVPIVMAEVVKMYGKFRNVDN 721
            +K RPD V ++RIL IC E   +K+G E+H QVLK K E V  V AE+VK+YGK   V  
Sbjct: 515  SKHRPDTVTMSRILYICSEQKMLKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAVKM 574

Query: 722  ARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNGLVPNHYMFVVALRICEK 901
            A+MV++ I  KG +T TAIIEAYG + +++EAI +FD M S G+ PNH+ F V L IC++
Sbjct: 575  AKMVFEAIPVKGPMTWTAIIEAYGESGEFQEAIDLFDRMRSRGISPNHFTFKVVLSICKE 634

Query: 902  AGFVDSALRIFNMMIQEYDIKAS 970
            AGFVD ALRIF +M   Y IK S
Sbjct: 635  AGFVDEALRIFKLMSVRYKIKPS 657



 Score =  133 bits (334), Expect = 1e-28
 Identities = 80/299 (26%), Positives = 148/299 (49%), Gaps = 3/299 (1%)
 Frame = +2

Query: 8    REVHGFVLKRSRYYHNMVFVLAGLINMYCKCGDMVSARRVFYGSHERNAVSWTALISGYA 187
            +++H  +  R     N  F+   L++MY  CG +  A+++F  S  ++   W AL+ G  
Sbjct: 134  KQIHAHI--RINGLENNEFIRTRLVHMYTACGSLEEAQKLFDESSSKSVYPWNALLRGTV 191

Query: 188  SCGR--FEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGKEMHAFTVKHCFLPN 361
              GR  +   L + A M++ G++ ++ + A  I   A   A   G + H   +K+  + +
Sbjct: 192  MAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASAFTQGLKAHGLLIKNGLIGS 251

Query: 362  ISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNGSPCDALSVFRSMLQ 541
              + T+L+ MY   G I  + ++F ++  R+V+ W ++I  ++ N    +AL   R M+ 
Sbjct: 252  SLLGTTLVDMYFKCGKIKLARQMFGEITERDVVVWGSIIAGFAHNRLQREALEYTRRMID 311

Query: 542  TKQRPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLESVPI-VMAEVVKMYGKFRNVD 718
               RP+ V L  IL + GEI + ++G EVHA V+K K  S  I + + ++ MY K  ++ 
Sbjct: 312  DGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFIQSALIDMYCKCGDIG 371

Query: 719  NARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNGLVPNHYMFVVALRIC 895
            + R V+     + ++  TA++  Y  N + E+A+     M   G  P+       L +C
Sbjct: 372  SGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDIVTVATILPVC 430



 Score = 80.9 bits (198), Expect = 7e-13
 Identities = 61/258 (23%), Positives = 118/258 (45%), Gaps = 7/258 (2%)
 Frame = +2

Query: 140 HERNAVSWTALISGYASCGRFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGK 319
           H +N  +    +  +A   + ++AL  + ++ Q+GI  +  T ++ I  C + K+    K
Sbjct: 75  HTKNPHAIYEDVQRFARQNKLKEALTIMDYVDQQGIPVNATTFSSLITACVRTKSMTYAK 134

Query: 320 EMHAFTVKHCFLPNISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNG 499
           ++HA    +    N  I T L+ MY+A G+++ + +LF++  +++V  W AL+      G
Sbjct: 135 QIHAHIRINGLENNEFIRTRLVHMYTACGSLEEAQKLFDESSSKSVYPWNALL-----RG 189

Query: 500 SPCDALSVFRSMLQT--KQRPDGVAL-----ARILSICGEIGSIKVGTEVHAQVLKMKLE 658
           +       +RS+L T  + R  GV L     A I+       +   G + H  ++K  L 
Sbjct: 190 TVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASAFTQGLKAHGLLIKNGLI 249

Query: 659 SVPIVMAEVVKMYGKFRNVDNARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSM 838
              ++   +V MY K   +  AR ++  I  +  +   +II  +  N    EA+     M
Sbjct: 250 GSSLLGTTLVDMYFKCGKIKLARQMFGEITERDVVVWGSIIAGFAHNRLQREALEYTRRM 309

Query: 839 LSNGLVPNHYMFVVALRI 892
           + +G+ PN  +    L +
Sbjct: 310 IDDGIRPNSVILTTILPV 327


>ref|XP_004141633.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
            chloroplastic-like [Cucumis sativus]
          Length = 696

 Score =  374 bits (960), Expect = e-101
 Identities = 180/323 (55%), Positives = 240/323 (74%)
 Frame = +2

Query: 2    LGREVHGFVLKRSRYYHNMVFVLAGLINMYCKCGDMVSARRVFYGSHERNAVSWTALISG 181
            LG+EVH +V+K ++ Y   +F+ + LI+MYCKCGD+ S R VFY S ERNA+ WTAL+SG
Sbjct: 336  LGQEVHAYVIK-TKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSG 394

Query: 182  YASCGRFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGKEMHAFTVKHCFLPN 361
            YA  GR EQA+RS+ WMQQEG +PDIVT+AT +PVCA+++A +PGKE+HA+ +K+CFLPN
Sbjct: 395  YALNGRLEQAVRSVIWMQQEGFRPDIVTVATILPVCAQLRALRPGKEIHAYAMKNCFLPN 454

Query: 362  ISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNGSPCDALSVFRSMLQ 541
            +SI +SLM MYS  G +DY+ +LFN M  RNV+ WTA+ID+Y +N  P +A+ +FR+M  
Sbjct: 455  VSIVSSLMVMYSKCGVMDYTLKLFNGMEQRNVILWTAMIDSYIENQCPHEAIDIFRAMQL 514

Query: 542  TKQRPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLESVPIVMAEVVKMYGKFRNVDN 721
            +K RPD V ++RIL IC E   +K+G E+H QVLK K E V  V AE+VK+YGK   V  
Sbjct: 515  SKHRPDTVTMSRILYICSEQKMLKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAVKM 574

Query: 722  ARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNGLVPNHYMFVVALRICEK 901
            A+MV++ I  KG +T TAIIEAYG + +++EAI +FD M S G+ PNH+ F V L IC++
Sbjct: 575  AKMVFEAIPVKGPMTWTAIIEAYGESGEFQEAIDLFDRMRSRGISPNHFTFKVVLSICKE 634

Query: 902  AGFVDSALRIFNMMIQEYDIKAS 970
            AGFVD ALRIF +M   Y IK S
Sbjct: 635  AGFVDEALRIFKLMSVRYKIKPS 657



 Score =  133 bits (334), Expect = 1e-28
 Identities = 80/299 (26%), Positives = 148/299 (49%), Gaps = 3/299 (1%)
 Frame = +2

Query: 8    REVHGFVLKRSRYYHNMVFVLAGLINMYCKCGDMVSARRVFYGSHERNAVSWTALISGYA 187
            +++H  +  R     N  F+   L++MY  CG +  A+++F  S  ++   W AL+ G  
Sbjct: 134  KQIHAHI--RINGLENNEFIRTRLVHMYTACGSLEEAQKLFDESSSKSVYPWNALLRGTV 191

Query: 188  SCGR--FEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGKEMHAFTVKHCFLPN 361
              GR  +   L + A M++ G++ ++ + A  I   A   A   G + H   +K+  + +
Sbjct: 192  MAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASAFTQGLKAHGLLIKNGLIGS 251

Query: 362  ISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNGSPCDALSVFRSMLQ 541
              + T+L+ MY   G I  + ++F ++  R+V+ W ++I  ++ N    +AL   R M+ 
Sbjct: 252  SLLGTTLVDMYFKCGKIKLARQMFGEITERDVVVWGSIIAGFAHNRLQREALEYTRRMID 311

Query: 542  TKQRPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLESVPI-VMAEVVKMYGKFRNVD 718
               RP+ V L  IL + GEI + ++G EVHA V+K K  S  I + + ++ MY K  ++ 
Sbjct: 312  DGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFIQSALIDMYCKCGDIG 371

Query: 719  NARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNGLVPNHYMFVVALRIC 895
            + R V+     + ++  TA++  Y  N + E+A+     M   G  P+       L +C
Sbjct: 372  SGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDIVTVATILPVC 430



 Score = 80.9 bits (198), Expect = 7e-13
 Identities = 61/258 (23%), Positives = 118/258 (45%), Gaps = 7/258 (2%)
 Frame = +2

Query: 140 HERNAVSWTALISGYASCGRFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGK 319
           H +N  +    +  +A   + ++AL  + ++ Q+GI  +  T ++ I  C + K+    K
Sbjct: 75  HTKNPHAIYEDVQRFARQNKLKEALTIMDYVDQQGIPVNATTFSSLITACVRTKSMTYAK 134

Query: 320 EMHAFTVKHCFLPNISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNG 499
           ++HA    +    N  I T L+ MY+A G+++ + +LF++  +++V  W AL+      G
Sbjct: 135 QIHAHIRINGLENNEFIRTRLVHMYTACGSLEEAQKLFDESSSKSVYPWNALL-----RG 189

Query: 500 SPCDALSVFRSMLQT--KQRPDGVAL-----ARILSICGEIGSIKVGTEVHAQVLKMKLE 658
           +       +RS+L T  + R  GV L     A I+       +   G + H  ++K  L 
Sbjct: 190 TVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASAFTQGLKAHGLLIKNGLI 249

Query: 659 SVPIVMAEVVKMYGKFRNVDNARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSM 838
              ++   +V MY K   +  AR ++  I  +  +   +II  +  N    EA+     M
Sbjct: 250 GSSLLGTTLVDMYFKCGKIKLARQMFGEITERDVVVWGSIIAGFAHNRLQREALEYTRRM 309

Query: 839 LSNGLVPNHYMFVVALRI 892
           + +G+ PN  +    L +
Sbjct: 310 IDDGIRPNSVILTTILPV 327


>ref|NP_001141997.1| hypothetical protein [Zea mays] gi|194706740|gb|ACF87454.1| unknown
            [Zea mays] gi|413916679|gb|AFW56611.1| hypothetical
            protein ZEAMMB73_013723 [Zea mays]
          Length = 688

 Score =  374 bits (960), Expect = e-101
 Identities = 177/323 (54%), Positives = 242/323 (74%)
 Frame = +2

Query: 2    LGREVHGFVLKRSRYYHNMVFVLAGLINMYCKCGDMVSARRVFYGSHERNAVSWTALISG 181
            LGREVHGFVLK+     ++  V AGL++MYCKCGDM+S RRVFY S +RNAVSWTAL+SG
Sbjct: 323  LGREVHGFVLKKFGNRKDVAKVQAGLVDMYCKCGDMISGRRVFYNSKKRNAVSWTALMSG 382

Query: 182  YASCGRFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGKEMHAFTVKHCFLPN 361
            YAS  R +QALR IAWMQQEGI+PD++ + T +PVC K+KA + GK++HA+ ++  FLPN
Sbjct: 383  YASNSRPDQALRCIAWMQQEGIRPDLIAVGTVLPVCTKLKALREGKQLHAYALRRWFLPN 442

Query: 362  ISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNGSPCDALSVFRSMLQ 541
            +S+ TSL+TMY    +++YS R+F+ M  + V AWTAL+D   KNG P  A+ +FRSML 
Sbjct: 443  VSLCTSLITMYGTCDHLEYSHRVFHDMDKKTVQAWTALVDANLKNGDPFTAMDLFRSMLL 502

Query: 542  TKQRPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLESVPIVMAEVVKMYGKFRNVDN 721
            T +RPD VA+ R+LS C +IG+++VG EVH QVL++++E +P+V AEVV MYG+  ++  
Sbjct: 503  TNRRPDAVAITRMLSACTDIGALRVGKEVHRQVLQLRMEQLPLVAAEVVNMYGRCGDLKA 562

Query: 722  ARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNGLVPNHYMFVVALRICEK 901
            A+ V++  ++KGS+TCTAIIEAY  N ++++A+H+F  MLSN  VP    F V L+ICE 
Sbjct: 563  AQRVFNRTESKGSMTCTAIIEAYAVNQRHKDALHLFTWMLSNKFVPTKATFDVVLKICEA 622

Query: 902  AGFVDSALRIFNMMIQEYDIKAS 970
            AG  D AL IFN M+QEY ++ S
Sbjct: 623  AGLHDEALGIFNSMVQEYKLETS 645



 Score =  144 bits (364), Expect = 4e-32
 Identities = 83/297 (27%), Positives = 148/297 (49%), Gaps = 2/297 (0%)
 Frame = +2

Query: 65   VLAGLINMYCKCGDMVSARRVFYGSHERNAVSWTALISGYASCGRFEQALRSIAWMQQEG 244
            ++ GL+++Y KCG +  A RVF    ER+ V+W A I+G+A  G   +AL    WM ++G
Sbjct: 241  LMTGLMDVYFKCGKVKLAVRVFEEMPERDVVAWGAAIAGFAHKGMKREALEHFRWMVEDG 300

Query: 245  IKPDIVTIATAIPVCAKMKASKPGKEMHAFTVKHCFLPN--ISISTSLMTMYSALGNIDY 418
            +K + V +++ +PV  +++A   G+E+H F +K          +   L+ MY   G++  
Sbjct: 301  VKVNCVVLSSIVPVIGELRARNLGREVHGFVLKKFGNRKDVAKVQAGLVDMYCKCGDMIS 360

Query: 419  SCRLFNKMPNRNVLAWTALIDTYSKNGSPCDALSVFRSMLQTKQRPDGVALARILSICGE 598
              R+F     RN ++WTAL+  Y+ N  P  AL     M Q   RPD +A+  +L +C +
Sbjct: 361  GRRVFYNSKKRNAVSWTALMSGYASNSRPDQALRCIAWMQQEGIRPDLIAVGTVLPVCTK 420

Query: 599  IGSIKVGTEVHAQVLKMKLESVPIVMAEVVKMYGKFRNVDNARMVYDGIDNKGSLTCTAI 778
            + +++ G ++HA  L+        +   ++ MYG   +++ +  V+  +D K     TA+
Sbjct: 421  LKALREGKQLHAYALRRWFLPNVSLCTSLITMYGTCDHLEYSHRVFHDMDKKTVQAWTAL 480

Query: 779  IEAYGFNSQYEEAIHIFDSMLSNGLVPNHYMFVVALRICEKAGFVDSALRIFNMMIQ 949
            ++A   N     A+ +F SML     P+       L  C   G +     +   ++Q
Sbjct: 481  VDANLKNGDPFTAMDLFRSMLLTNRRPDAVAITRMLSACTDIGALRVGKEVHRQVLQ 537


>ref|XP_002325518.2| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550317217|gb|EEE99899.2|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 678

 Score =  372 bits (956), Expect = e-101
 Identities = 182/323 (56%), Positives = 236/323 (73%)
 Frame = +2

Query: 2    LGREVHGFVLKRSRYYHNMVFVLAGLINMYCKCGDMVSARRVFYGSHERNAVSWTALISG 181
            LG+EVH +VLK   Y   +  + +GLI+MYCKCGDM S RRVFYGS ERN VSWTAL+SG
Sbjct: 326  LGQEVHCYVLKMKGYSRELS-IQSGLIDMYCKCGDMGSGRRVFYGSRERNVVSWTALMSG 384

Query: 182  YASCGRFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGKEMHAFTVKHCFLPN 361
            Y S GR EQALRS+ WMQQEG +PD+VT+AT IPVCAK+K  K GKE+HAF+VK  FLPN
Sbjct: 385  YVSNGRLEQALRSVVWMQQEGCRPDVVTVATVIPVCAKLKTLKHGKEIHAFSVKKLFLPN 444

Query: 362  ISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNGSPCDALSVFRSMLQ 541
            +S++TSL+ MYS  G +DYS +LF+ M  RNV+AWTA+ID+Y +NG   +A +VFR M  
Sbjct: 445  VSLTTSLIKMYSKCGVLDYSVKLFDGMEARNVIAWTAMIDSYVENGCINEAFNVFRFMQW 504

Query: 542  TKQRPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLESVPIVMAEVVKMYGKFRNVDN 721
            +K RPD V +AR+LSIC +I ++K G E+H  +LK   ES+P V +E+VKMYG    V +
Sbjct: 505  SKHRPDSVTMARMLSICSKIKTLKFGKEIHGHILKKDFESIPFVSSELVKMYGSCGLVHS 564

Query: 722  ARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNGLVPNHYMFVVALRICEK 901
            A  V++ +  KGS+T TAIIEAYG+NS +++AI +FD M S    PN + F V L IC++
Sbjct: 565  AESVFNAVPVKGSMTWTAIIEAYGYNSLWQDAIKLFDEMRSRKFTPNDFTFKVVLSICDE 624

Query: 902  AGFVDSALRIFNMMIQEYDIKAS 970
            AGF D A RIF +M + Y +K S
Sbjct: 625  AGFADDACRIFELMSKRYKVKIS 647



 Score =  119 bits (298), Expect = 2e-24
 Identities = 82/302 (27%), Positives = 143/302 (47%), Gaps = 4/302 (1%)
 Frame = +2

Query: 8    REVHGFVLKRSRYYHNMVFVLAGLINMYCKCGDMVSARRVFYGSHERNAV-SWTALISGY 184
            +E+H  +  R     N  F+   L++MY  CG +  A+ VF        V  W ALI G 
Sbjct: 123  KEIHTHL--RINGLQNNEFLRTKLVHMYTSCGSIEDAKSVFDECTSTATVYPWNALIRGT 180

Query: 185  ASCG--RFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGKEMHAFTVKHCFLP 358
               G  R+   L +   M+  G++ +  T +  I   A   A K G + HA  +K+  + 
Sbjct: 181  VISGKKRYGDVLSAYQEMRVNGVELNEYTFSNVIKSFAGASALKQGFKTHAIMIKNGMIS 240

Query: 359  NISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNGSPCDALSVFRSML 538
            +  + T L+ MY   G    +  +F ++  R+++AW A+I  ++ N    +AL   R M+
Sbjct: 241  SAVLRTCLIDMYFKCGKTRLAHNVFEELLERDIVAWGAMIAGFAHNRRQWEALDYVRWMV 300

Query: 539  QTKQRPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLESVPI-VMAEVVKMYGKFRNV 715
                 P+ V +  IL + GE+ + ++G EVH  VLKMK  S  + + + ++ MY K  ++
Sbjct: 301  SEGMYPNSVIITSILPVIGEVWARRLGQEVHCYVLKMKGYSRELSIQSGLIDMYCKCGDM 360

Query: 716  DNARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNGLVPNHYMFVVALRIC 895
             + R V+ G   +  ++ TA++  Y  N + E+A+     M   G  P+       + +C
Sbjct: 361  GSGRRVFYGSRERNVVSWTALMSGYVSNGRLEQALRSVVWMQQEGCRPDVVTVATVIPVC 420

Query: 896  EK 901
             K
Sbjct: 421  AK 422



 Score = 70.9 bits (172), Expect = 7e-10
 Identities = 56/254 (22%), Positives = 113/254 (44%), Gaps = 3/254 (1%)
 Frame = +2

Query: 140 HERNAVSWTALISGYASCGRFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGK 319
           H++N  +    I  ++   + + AL  + +M Q+GI  +  T +  I  C + K+    K
Sbjct: 64  HKKNPQAIYKDIQRFSRKNQLKDALIIMDYMDQQGIPVNPTTFSALIAACIRSKSLTKAK 123

Query: 320 EMHAFTVKHCFLPNISISTSLMTMYSALGNIDYSCRLFNKMPN-RNVLAWTALIDTYSKN 496
           E+H     +    N  + T L+ MY++ G+I+ +  +F++  +   V  W ALI     +
Sbjct: 124 EIHTHLRINGLQNNEFLRTKLVHMYTSCGSIEDAKSVFDECTSTATVYPWNALIRGTVIS 183

Query: 497 GSP--CDALSVFRSMLQTKQRPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLESVPI 670
           G     D LS ++ M       +    + ++       ++K G + HA ++K  + S  +
Sbjct: 184 GKKRYGDVLSAYQEMRVNGVELNEYTFSNVIKSFAGASALKQGFKTHAIMIKNGMISSAV 243

Query: 671 VMAEVVKMYGKFRNVDNARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNG 850
           +   ++ MY K      A  V++ +  +  +   A+I  +  N +  EA+     M+S G
Sbjct: 244 LRTCLIDMYFKCGKTRLAHNVFEELLERDIVAWGAMIAGFAHNRRQWEALDYVRWMVSEG 303

Query: 851 LVPNHYMFVVALRI 892
           + PN  +    L +
Sbjct: 304 MYPNSVIITSILPV 317


>ref|XP_006478380.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
            chloroplastic-like [Citrus sinensis]
          Length = 681

 Score =  372 bits (955), Expect = e-100
 Identities = 183/322 (56%), Positives = 240/322 (74%)
 Frame = +2

Query: 2    LGREVHGFVLKRSRYYHNMVFVLAGLINMYCKCGDMVSARRVFYGSHERNAVSWTALISG 181
            LG+EVH +VLK  RY   + FV + L++MYCKC DM SA RVFY + ERN + WTAL+SG
Sbjct: 329  LGQEVHAYVLKNERYSEEL-FVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSG 387

Query: 182  YASCGRFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGKEMHAFTVKHCFLPN 361
            Y S GR EQALRSIAWMQQEG +PD+VT+AT IPVC+++KA   GKE+HA+ VK+ FLPN
Sbjct: 388  YVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPN 447

Query: 362  ISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNGSPCDALSVFRSMLQ 541
            +SI TSLM MYS  G +DYS +LF++M  RNV++WTA+ID+  +NG   DAL VFRSM  
Sbjct: 448  VSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQL 507

Query: 542  TKQRPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLESVPIVMAEVVKMYGKFRNVDN 721
            +K RPD VA+AR+LS+ G++ ++K+G E+H QVLK   ESVP V AE +KMYG    ++ 
Sbjct: 508  SKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFESVPFVAAENIKMYGMCGFLEC 567

Query: 722  ARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNGLVPNHYMFVVALRICEK 901
            A++V+D +  KGS+T TAIIEAYG+N   +EA+ +F+ M + G  PNH+ F V L IC +
Sbjct: 568  AKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFNKMRNGGFTPNHFTFKVLLSICNQ 627

Query: 902  AGFVDSALRIFNMMIQEYDIKA 967
            AGF D A RIFN+M +EY I+A
Sbjct: 628  AGFADEACRIFNVMSREYKIEA 649



 Score =  129 bits (323), Expect = 2e-27
 Identities = 84/302 (27%), Positives = 147/302 (48%), Gaps = 3/302 (0%)
 Frame = +2

Query: 5    GREVHGFVLKRSRYYHNMVFVLAGLINMYCKCGDMVSARRVFYGSHERNAVSWTALISGY 184
            GR +H  +  R     N  F+   L+ MY  CG    A +VF  S   +   W AL+ G 
Sbjct: 126  GRLIHTHI--RINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGA 183

Query: 185  ASCG--RFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGKEMHAFTVKHCFLP 358
               G  R+   L +   M++ G++ ++ T +  I   A   A   G + HA  +K+ F+ 
Sbjct: 184  VIAGKKRYRDVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVD 243

Query: 359  NISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNGSPCDALSVFRSML 538
               + TSL+ MY   G I  + R+F++  +R+++ W ++I  ++ N    +AL   R M+
Sbjct: 244  YSILRTSLIDMYFKCGKIKLARRVFDETDDRDIVVWGSMIAGFAHNRLRWEALDCARWMI 303

Query: 539  QTKQRPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLESVPI-VMAEVVKMYGKFRNV 715
            +    P+ V L  +L + GE  + K+G EVHA VLK +  S  + V + +V MY K R++
Sbjct: 304  REGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDM 363

Query: 716  DNARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNGLVPNHYMFVVALRIC 895
            ++A  V+   + +  +  TA++  Y  N + E+A+     M   G  P+       + +C
Sbjct: 364  NSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVC 423

Query: 896  EK 901
             +
Sbjct: 424  SQ 425



 Score = 77.4 bits (189), Expect = 8e-12
 Identities = 58/262 (22%), Positives = 118/262 (45%), Gaps = 7/262 (2%)
 Frame = +2

Query: 140 HERNAVSWTALISGYASCGRFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGK 319
           HE+N  +    I  +A   + ++AL  + +M Q+GI  ++ T    I  C + ++   G+
Sbjct: 68  HEKNPRAIYKDIQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGR 127

Query: 320 EMHAFTVKHCFLPNISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNG 499
            +H     +    N  + T L+ MY++ G+ + + ++F++  + +V  W AL+      G
Sbjct: 128 LIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALL-----RG 182

Query: 500 SPCDALSVFRSML--QTKQRPDGVAL-----ARILSICGEIGSIKVGTEVHAQVLKMKLE 658
           +       +R +L    K R  GV L     + ++       ++  G + HA ++K    
Sbjct: 183 AVIAGKKRYRDVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFV 242

Query: 659 SVPIVMAEVVKMYGKFRNVDNARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSM 838
              I+   ++ MY K   +  AR V+D  D++  +   ++I  +  N    EA+     M
Sbjct: 243 DYSILRTSLIDMYFKCGKIKLARRVFDETDDRDIVVWGSMIAGFAHNRLRWEALDCARWM 302

Query: 839 LSNGLVPNHYMFVVALRICEKA 904
           +  G+ PN  +  + L +  +A
Sbjct: 303 IREGIYPNSVVLTILLPVIGEA 324


>ref|XP_002888838.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297334679|gb|EFH65097.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 688

 Score =  369 bits (948), Expect = e-100
 Identities = 173/323 (53%), Positives = 236/323 (73%)
 Frame = +2

Query: 2    LGREVHGFVLKRSRYYHNMVFVLAGLINMYCKCGDMVSARRVFYGSHERNAVSWTALISG 181
            LG+EVH  VLK   Y     FV +GLI++YCKCGDMVS RRVFYGS +RNA+SWTAL+SG
Sbjct: 333  LGKEVHAHVLKMKNYLEQP-FVHSGLIDLYCKCGDMVSGRRVFYGSKQRNAISWTALMSG 391

Query: 182  YASCGRFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGKEMHAFTVKHCFLPN 361
            YA+ GRF+QALRSI WMQQEG KPD+VTIAT +PVCA+++A K GKE+H + +K+ FLPN
Sbjct: 392  YAANGRFDQALRSIVWMQQEGFKPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPN 451

Query: 362  ISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNGSPCDALSVFRSMLQ 541
            +S+ TSLM MYS  G  +Y  RLF+++  RNV AWTA+ID Y +NG     + VFRSML 
Sbjct: 452  VSLVTSLMVMYSKCGVPEYPVRLFDRLEQRNVKAWTAMIDCYVENGDLRAGIEVFRSMLL 511

Query: 542  TKQRPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLESVPIVMAEVVKMYGKFRNVDN 721
            +K RPD V + R+L++C ++ ++K+G E+H  +LK + ES+P V A+++KMYG+  ++ +
Sbjct: 512  SKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSAKIIKMYGQCGDLRS 571

Query: 722  ARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNGLVPNHYMFVVALRICEK 901
            A   +D +  KGSLT TAIIEAYG+N ++ +AI  F+ M+S G  PN + F   L IC +
Sbjct: 572  ANFSFDAVVVKGSLTWTAIIEAYGYNGRFRDAIKCFEQMVSRGFTPNTFTFTAILSICSQ 631

Query: 902  AGFVDSALRIFNMMIQEYDIKAS 970
            AGF D A R FN+M++ Y++  S
Sbjct: 632  AGFADEAYRFFNLMLRMYNLHPS 654



 Score =  145 bits (365), Expect = 3e-32
 Identities = 86/302 (28%), Positives = 158/302 (52%), Gaps = 5/302 (1%)
 Frame = +2

Query: 5    GREVHGFVLKRSRYYHNMVFVLAGLINMYCKCGDMVSARRVFYGSHERNAVSWTALISGY 184
            G++VH  +  R     +  F+   L++MY  CG +  A++VF  S   N  SW AL+ G 
Sbjct: 129  GKQVHVHI--RINGLESNEFIRTKLVHMYTACGSVRDAQKVFDESTSSNVYSWNALLRGT 186

Query: 185  ASCG--RFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGKEMHAFTVKHCFLP 358
               G  R++  L +   M++ G+  ++ + +      A   A + G + HA  +K+    
Sbjct: 187  VISGKKRYQDVLSTFTEMRELGVDLNVYSFSNVFKSFAGASALRQGLKTHALAIKNGLFN 246

Query: 359  NISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNGSPCDALSVFRSML 538
            ++ + TSL+ MY   G +  + R+F+++  R+++ W A+I   + N    +AL +FRSM+
Sbjct: 247  SVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRSMI 306

Query: 539  QTKQ-RPDGVALARILSICGEIGSIKVGTEVHAQVLKMK--LESVPIVMAEVVKMYGKFR 709
              +   P+ V L  IL + G++ ++K+G EVHA VLKMK  LE  P V + ++ +Y K  
Sbjct: 307  SEEGIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKMKNYLEQ-PFVHSGLIDLYCKCG 365

Query: 710  NVDNARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNGLVPNHYMFVVALR 889
            ++ + R V+ G   + +++ TA++  Y  N ++++A+     M   G  P+       L 
Sbjct: 366  DMVSGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFKPDVVTIATVLP 425

Query: 890  IC 895
            +C
Sbjct: 426  VC 427



 Score = 90.1 bits (222), Expect = 1e-15
 Identities = 65/254 (25%), Positives = 116/254 (45%), Gaps = 3/254 (1%)
 Frame = +2

Query: 140 HERNAVSWTALISGYASCGRFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGK 319
           H +N  S    I  +A     E AL  + +++Q GI  +  T +  +  C + K+   GK
Sbjct: 71  HSKNPHSIHRDIQRFARKNNLEDALTILDYLEQRGIPVNATTFSALLAACVRRKSLLHGK 130

Query: 320 EMHAFTVKHCFLPNISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNG 499
           ++H     +    N  I T L+ MY+A G++  + ++F++  + NV +W AL+     +G
Sbjct: 131 QVHVHIRINGLESNEFIRTKLVHMYTACGSVRDAQKVFDESTSSNVYSWNALLRGTVISG 190

Query: 500 SP--CDALSVFRSMLQTKQRPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLESVPIV 673
                D LS F  M +     +  + + +        +++ G + HA  +K  L +   +
Sbjct: 191 KKRYQDVLSTFTEMRELGVDLNVYSFSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFL 250

Query: 674 MAEVVKMYGKFRNVDNARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLS-NG 850
              +V MY K   V  AR V+D I  +  +   A+I     N +  EA+ +F SM+S  G
Sbjct: 251 KTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRSMISEEG 310

Query: 851 LVPNHYMFVVALRI 892
           + PN  +    L +
Sbjct: 311 IYPNSVILTTILPV 324


>emb|CBI31326.3| unnamed protein product [Vitis vinifera]
          Length = 513

 Score =  369 bits (946), Expect = 1e-99
 Identities = 178/323 (55%), Positives = 233/323 (72%)
 Frame = +2

Query: 2    LGREVHGFVLKRSRYYHNMVFVLAGLINMYCKCGDMVSARRVFYGSHERNAVSWTALISG 181
            LGREVH +V+K ++ Y   VF+ + LI+MYCKCGDM S R+VFY S ERNAVSWTAL+SG
Sbjct: 163  LGREVHAYVVK-TKSYSKQVFIQSALIDMYCKCGDMASGRQVFYASTERNAVSWTALMSG 221

Query: 182  YASCGRFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGKEMHAFTVKHCFLPN 361
            Y S GR +QALRSIAWMQQEG +PD+VT+AT +PVCA+++A + GKE+H++ VK+ FLPN
Sbjct: 222  YVSNGRLDQALRSIAWMQQEGFRPDVVTVATVLPVCAELRALRQGKEIHSYAVKNGFLPN 281

Query: 362  ISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNGSPCDALSVFRSMLQ 541
            +SI+TSLM MYS  GN+DYS +LF+ M  RNV++WTA+ID+Y                  
Sbjct: 282  VSIATSLMVMYSKCGNLDYSFKLFDGMDARNVISWTAMIDSY------------------ 323

Query: 542  TKQRPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLESVPIVMAEVVKMYGKFRNVDN 721
               RPD VA+ARILSICGE+  +K+G E+H Q+LK   ES+P V AE++KMYGKF  +  
Sbjct: 324  --HRPDSVAMARILSICGELRVLKLGKEIHGQILKKDFESIPFVSAEIIKMYGKFGAISK 381

Query: 722  ARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNGLVPNHYMFVVALRICEK 901
            A++ +  I  KGS+  TAIIEAYG+N  Y++AI++F  M S+G +PNHY F   L ICE+
Sbjct: 382  AKLAFKAIPAKGSMAWTAIIEAYGYNDLYQDAINLFHQMQSDGFIPNHYTFKAVLSICER 441

Query: 902  AGFVDSALRIFNMMIQEYDIKAS 970
            A   D A  IFN+M + Y IKAS
Sbjct: 442  AELADDACLIFNLMSRRYRIKAS 464



 Score =  146 bits (368), Expect = 1e-32
 Identities = 83/263 (31%), Positives = 144/263 (54%), Gaps = 1/263 (0%)
 Frame = +2

Query: 5   GREVHGFVLKRSRYYHNMVFVLAGLINMYCKCGDMVSARRVFYGSHERNAVSWTALISGY 184
           G + H  ++K      +++     LI+MY KCG +  AR +F    ER+ V W A+I+G+
Sbjct: 63  GLKAHALLIKNGLVDSSIL--RTSLIDMYFKCGKIKLARLMFEEIVERDVVVWGAMIAGF 120

Query: 185 ASCGRFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGKEMHAFTVK-HCFLPN 361
                  +AL  + WM++EGI P+ V + T +PV  ++ A K G+E+HA+ VK   +   
Sbjct: 121 GHNRLQREALEYLRWMRREGICPNSVIMTTILPVIGEVGAWKLGREVHAYVVKTKSYSKQ 180

Query: 362 ISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNGSPCDALSVFRSMLQ 541
           + I ++L+ MY   G++    ++F     RN ++WTAL+  Y  NG    AL     M Q
Sbjct: 181 VFIQSALIDMYCKCGDMASGRQVFYASTERNAVSWTALMSGYVSNGRLDQALRSIAWMQQ 240

Query: 542 TKQRPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLESVPIVMAEVVKMYGKFRNVDN 721
              RPD V +A +L +C E+ +++ G E+H+  +K        +   ++ MY K  N+D 
Sbjct: 241 EGFRPDVVTVATVLPVCAELRALRQGKEIHSYAVKNGFLPNVSIATSLMVMYSKCGNLDY 300

Query: 722 ARMVYDGIDNKGSLTCTAIIEAY 790
           +  ++DG+D +  ++ TA+I++Y
Sbjct: 301 SFKLFDGMDARNVISWTAMIDSY 323



 Score = 92.4 bits (228), Expect = 2e-16
 Identities = 54/197 (27%), Positives = 100/197 (50%), Gaps = 1/197 (0%)
 Frame = +2

Query: 308 KPGKEMHAFTVKHCFLPNISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTY 487
           + G + HA  +K+  + +  + TSL+ MY   G I  +  +F ++  R+V+ W A+I  +
Sbjct: 61  RQGLKAHALLIKNGLVDSSILRTSLIDMYFKCGKIKLARLMFEEIVERDVVVWGAMIAGF 120

Query: 488 SKNGSPCDALSVFRSMLQTKQRPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLESVP 667
             N    +AL   R M +    P+ V +  IL + GE+G+ K+G EVHA V+K K  S  
Sbjct: 121 GHNRLQREALEYLRWMRREGICPNSVIMTTILPVIGEVGAWKLGREVHAYVVKTKSYSKQ 180

Query: 668 I-VMAEVVKMYGKFRNVDNARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLS 844
           + + + ++ MY K  ++ + R V+     + +++ TA++  Y  N + ++A+     M  
Sbjct: 181 VFIQSALIDMYCKCGDMASGRQVFYASTERNAVSWTALMSGYVSNGRLDQALRSIAWMQQ 240

Query: 845 NGLVPNHYMFVVALRIC 895
            G  P+       L +C
Sbjct: 241 EGFRPDVVTVATVLPVC 257


>ref|XP_003534476.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
            chloroplastic-like [Glycine max]
          Length = 682

 Score =  368 bits (945), Expect = 2e-99
 Identities = 176/323 (54%), Positives = 242/323 (74%)
 Frame = +2

Query: 2    LGREVHGFVLKRSRYYHNMVFVLAGLINMYCKCGDMVSARRVFYGSHERNAVSWTALISG 181
            LG+E H +V+K ++ Y  +V V + LI+MYCKCGDM+SARRVFYGS ERN V WTAL+SG
Sbjct: 335  LGQEFHAYVVK-TKSYSKLVPVQSSLIDMYCKCGDMISARRVFYGSKERNVVCWTALMSG 393

Query: 182  YASCGRFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGKEMHAFTVKHCFLPN 361
            YA+ G+ EQALRS  WMQQEG +PD+VT+AT +PVCA+++A + GK++HA+ +KH FLPN
Sbjct: 394  YAANGKLEQALRSTIWMQQEGFRPDVVTLATVLPVCAQLRALEQGKQIHAYALKHWFLPN 453

Query: 362  ISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNGSPCDALSVFRSMLQ 541
            +S+++SLMTMYS  G ++YS RLF+ M  RNV++WTA+ID+Y +NG  C+AL V RSM  
Sbjct: 454  VSVASSLMTMYSKCGVVEYSRRLFDNMEQRNVISWTAMIDSYIENGYLCEALGVIRSMQL 513

Query: 542  TKQRPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLESVPIVMAEVVKMYGKFRNVDN 721
            +K RPD VA+ R+LS+CGE   +K+G E+H Q+LK    SV  V AE++ MYG F +++ 
Sbjct: 514  SKHRPDSVAIGRMLSVCGERKLVKLGKEIHGQILKRDFTSVHFVSAELINMYGFFGDINK 573

Query: 722  ARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNGLVPNHYMFVVALRICEK 901
            A +V++ +  KGS+T TA+I AYG+N  Y++A+++FD M  +   PNH+ F   L IC+K
Sbjct: 574  ANLVFNAVPVKGSMTWTALIRAYGYNELYQDAVNLFDQMRYS---PNHFTFEAILSICDK 630

Query: 902  AGFVDSALRIFNMMIQEYDIKAS 970
            AGFVD A RIFN M   Y I+AS
Sbjct: 631  AGFVDDACRIFNSM-PRYKIEAS 652



 Score =  135 bits (341), Expect = 2e-29
 Identities = 83/313 (26%), Positives = 156/313 (49%), Gaps = 4/313 (1%)
 Frame = +2

Query: 5    GREVHGFVLKRSRYYHNMVFVLAGLINMYCKCGDMVSARRVFYGSHERNAVSWTALISGY 184
            GREVH  +  R     N  F+   L++MY  CG +  A+++F G    +   W AL+ G 
Sbjct: 132  GREVHTHI--RINGLENNSFLRTKLVHMYTACGSLEDAQKLFDGLPCESVYPWNALLRGT 189

Query: 185  ASCGR--FEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGKEMHAFTVKHCFLP 358
               G+  +   L++   M+  G++ ++ + +  I   A  +A   G + H   +K+  + 
Sbjct: 190  VVSGKRQYIDVLKTYTEMRALGVELNVYSFSNVIKSFAGARAFSQGLKTHGLLIKNGLVD 249

Query: 359  NISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNGSPCDALSVFRSML 538
            N  + TSL+ MY   G +  +CR+F ++P R+V+ W A++  ++ N    + L   R M+
Sbjct: 250  NYILRTSLIDMYFKCGKVRLACRVFEEIPERDVVVWGAMLAGFAHNRLQREVLEYVRWMV 309

Query: 539  QTKQRPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLES--VPIVMAEVVKMYGKFRN 712
            +   +P+ V +  ++ + GE+ + ++G E HA V+K K  S  VP V + ++ MY K  +
Sbjct: 310  EEGVKPNSVVMTIVIPVIGEVCARRLGQEFHAYVVKTKSYSKLVP-VQSSLIDMYCKCGD 368

Query: 713  VDNARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNGLVPNHYMFVVALRI 892
            + +AR V+ G   +  +  TA++  Y  N + E+A+     M   G  P+       L +
Sbjct: 369  MISARRVFYGSKERNVVCWTALMSGYAANGKLEQALRSTIWMQQEGFRPDVVTLATVLPV 428

Query: 893  CEKAGFVDSALRI 931
            C +   ++   +I
Sbjct: 429  CAQLRALEQGKQI 441



 Score =  122 bits (307), Expect = 2e-25
 Identities = 74/230 (32%), Positives = 118/230 (51%)
 Frame = +2

Query: 5    GREVHGFVLKRSRYYHNMVFVLAGLINMYCKCGDMVSARRVFYGSHERNAVSWTALISGY 184
            G+++H + LK   ++   V V + L+ MY KCG +  +RR+F    +RN +SWTA+I  Y
Sbjct: 438  GKQIHAYALKH--WFLPNVSVASSLMTMYSKCGVVEYSRRLFDNMEQRNVISWTAMIDSY 495

Query: 185  ASCGRFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGKEMHAFTVKHCFLPNI 364
               G   +AL  I  MQ    +PD V I   + VC + K  K GKE+H   +K  F    
Sbjct: 496  IENGYLCEALGVIRSMQLSKHRPDSVAIGRMLSVCGERKLVKLGKEIHGQILKRDFTSVH 555

Query: 365  SISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNGSPCDALSVFRSMLQT 544
             +S  L+ MY   G+I+ +  +FN +P +  + WTALI  Y  N    DA+++F  M   
Sbjct: 556  FVSAELINMYGFFGDINKANLVFNAVPVKGSMTWTALIRAYGYNELYQDAVNLFDQM--- 612

Query: 545  KQRPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLESVPIVMAEVVKM 694
            +  P+      ILSIC + G +     +   + + K+E+     A +V++
Sbjct: 613  RYSPNHFTFEAILSICDKAGFVDDACRIFNSMPRYKIEASKEHFAIMVRL 662



 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 53/253 (20%), Positives = 109/253 (43%), Gaps = 2/253 (0%)
 Frame = +2

Query: 140 HERNAVSWTALISGYASCGRFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGK 319
           H +N +     I  +A   + ++AL  + ++ Q GI  D  T ++ +  C + K+   G+
Sbjct: 74  HNKNPIFIFKDIKRFARQNKLKEALTILDYVDQRGIPVDATTFSSVVAACIRAKSLPQGR 133

Query: 320 EMHAFTVKHCFLPNISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALI--DTYSK 493
           E+H     +    N  + T L+ MY+A G+++ + +LF+ +P  +V  W AL+     S 
Sbjct: 134 EVHTHIRINGLENNSFLRTKLVHMYTACGSLEDAQKLFDGLPCESVYPWNALLRGTVVSG 193

Query: 494 NGSPCDALSVFRSMLQTKQRPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLESVPIV 673
                D L  +  M       +  + + ++       +   G + H  ++K  L    I+
Sbjct: 194 KRQYIDVLKTYTEMRALGVELNVYSFSNVIKSFAGARAFSQGLKTHGLLIKNGLVDNYIL 253

Query: 674 MAEVVKMYGKFRNVDNARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNGL 853
              ++ MY K   V  A  V++ I  +  +   A++  +  N    E +     M+  G+
Sbjct: 254 RTSLIDMYFKCGKVRLACRVFEEIPERDVVVWGAMLAGFAHNRLQREVLEYVRWMVEEGV 313

Query: 854 VPNHYMFVVALRI 892
            PN  +  + + +
Sbjct: 314 KPNSVVMTIVIPV 326


>gb|EEE52923.1| hypothetical protein OsJ_35543 [Oryza sativa Japonica Group]
          Length = 1348

 Score =  368 bits (945), Expect = 2e-99
 Identities = 178/324 (54%), Positives = 243/324 (75%), Gaps = 1/324 (0%)
 Frame = +2

Query: 2    LGREVHGFVLKRSRYYHNMVFVLAGLINMYCKCGDMVSARRVFYGSHERNAVSWTALISG 181
            LGRE+HGFVLK+ ++  ++  + AGL++MYCKCGDMVS RRVFY + +RN VSWTAL+SG
Sbjct: 318  LGREIHGFVLKKFQHRKDVGNIQAGLVDMYCKCGDMVSGRRVFYSAKKRNVVSWTALMSG 377

Query: 182  YASCGRFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGKEMHAFTVKHCFLPN 361
            YAS GR +QALR I WMQQEGI+PD++ + T +PVC K+KA + GKE+HA+ ++  FLPN
Sbjct: 378  YASNGRPDQALRCILWMQQEGIRPDLIAVGTVLPVCTKLKALREGKELHAYALRRWFLPN 437

Query: 362  ISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNGSPCDALSVFRSMLQ 541
            IS+ TSL+TMY    + DYS R+F+ M  + V AWTAL+D Y KNG P  A+ VFRSML 
Sbjct: 438  ISLCTSLITMYGTCSHSDYSQRVFHVMDKKTVQAWTALVDAYLKNGDPSTAVDVFRSMLL 497

Query: 542  TKQRPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLESVPIVMAEVVKMYGKFRNVDN 721
            + +RPD VA++R+LS C +IG+ K+G E+H Q LK+++E +P+V A +V MYG   ++  
Sbjct: 498  SNRRPDAVAISRMLSACRDIGASKLGKELHGQALKLRMEPLPLVAAGLVSMYGTCGDLKA 557

Query: 722  ARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNGLVPNHYMFVVALRICEK 901
            A+ V++ I++KGSLTCTAIIEAY  N +++EA+ +F  MLSN  VPN+  F V LRICE 
Sbjct: 558  AQRVFNRIESKGSLTCTAIIEAYAINQRHKEALELFAWMLSNRFVPNNGTFDVLLRICEA 617

Query: 902  AGFVDSALRIFNM-MIQEYDIKAS 970
            AG  D AL+ F   M+QEY+++AS
Sbjct: 618  AGLHDEALQDFQTPMVQEYNLEAS 641



 Score =  152 bits (384), Expect = 2e-34
 Identities = 91/299 (30%), Positives = 153/299 (51%), Gaps = 2/299 (0%)
 Frame = +2

Query: 17   HGFVLKRSRYYHNMVFVLAGLINMYCKCGDMVSARRVFYGSHERNAVSWTALISGYASCG 196
            H  ++K + Y      ++ GL+++Y KCG +  A  VF    ER+ V+W A+I+G+A  G
Sbjct: 221  HAMLIKNA-YAGAPRMLMTGLMDVYFKCGKVKPAVMVFEEMPERDVVAWGAVIAGFAHKG 279

Query: 197  RFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGKEMHAFTVKHCFLPNI--SI 370
               +AL    WM ++GIK + V + + +PV  +++A   G+E+H F +K         +I
Sbjct: 280  MKREALEHFRWMVEDGIKVNSVVLTSVVPVIGELRAWNLGREIHGFVLKKFQHRKDVGNI 339

Query: 371  STSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNGSPCDALSVFRSMLQTKQ 550
               L+ MY   G++    R+F     RNV++WTAL+  Y+ NG P  AL     M Q   
Sbjct: 340  QAGLVDMYCKCGDMVSGRRVFYSAKKRNVVSWTALMSGYASNGRPDQALRCILWMQQEGI 399

Query: 551  RPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLESVPIVMAEVVKMYGKFRNVDNARM 730
            RPD +A+  +L +C ++ +++ G E+HA  L+        +   ++ MYG   + D ++ 
Sbjct: 400  RPDLIAVGTVLPVCTKLKALREGKELHAYALRRWFLPNISLCTSLITMYGTCSHSDYSQR 459

Query: 731  VYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNGLVPNHYMFVVALRICEKAG 907
            V+  +D K     TA+++AY  N     A+ +F SML +   P+       L  C   G
Sbjct: 460  VFHVMDKKTVQAWTALVDAYLKNGDPSTAVDVFRSMLLSNRRPDAVAISRMLSACRDIG 518



 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 53/245 (21%), Positives = 103/245 (42%), Gaps = 6/245 (2%)
 Frame = +2

Query: 146 RNAVSWTALISGYASCGRFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGKEM 325
           +NA + +A +   A  GR   AL  +  +   G+       A  +  C  +  ++   ++
Sbjct: 58  KNAPALSAELRRLARVGRLPSALALLDHLSHRGVPATASAFAALLTACRSLAHAR---QV 114

Query: 326 HAFTVKHCFLPNISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNGSP 505
           HA    H    N  +   L+ +Y ALG  + + ++ + +P  +  +W AL+  + + G  
Sbjct: 115 HAHLRVHGLDSNEFLLARLVELYLALGAREDARKVLDGLPRASSFSWNALLHGHVRRGRG 174

Query: 506 CDALSV---FRSMLQTKQRPDGVALARIL-SICGEIG-SIKVGTEVHAQVLKMKLESVP- 667
               +V   F  M       +      +L SI G    S+ + T  HA ++K      P 
Sbjct: 175 QAGAAVVDGFAEMRAAGADANEYTYGCVLKSISGSAAPSMAMATATHAMLIKNAYAGAPR 234

Query: 668 IVMAEVVKMYGKFRNVDNARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSN 847
           ++M  ++ +Y K   V  A MV++ +  +  +   A+I  +       EA+  F  M+ +
Sbjct: 235 MLMTGLMDVYFKCGKVKPAVMVFEEMPERDVVAWGAVIAGFAHKGMKREALEHFRWMVED 294

Query: 848 GLVPN 862
           G+  N
Sbjct: 295 GIKVN 299


>ref|XP_006301077.1| hypothetical protein CARUB_v10021470mg [Capsella rubella]
            gi|482569787|gb|EOA33975.1| hypothetical protein
            CARUB_v10021470mg [Capsella rubella]
          Length = 688

 Score =  367 bits (943), Expect = 3e-99
 Identities = 173/323 (53%), Positives = 236/323 (73%)
 Frame = +2

Query: 2    LGREVHGFVLKRSRYYHNMVFVLAGLINMYCKCGDMVSARRVFYGSHERNAVSWTALISG 181
            LG+EVH  VLK   Y     FV +GLI++YCKCGDMVS RRVFYGS +RNA+SWTAL+SG
Sbjct: 333  LGKEVHAHVLKTKNYVEQP-FVHSGLIDLYCKCGDMVSGRRVFYGSKQRNAISWTALMSG 391

Query: 182  YASCGRFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGKEMHAFTVKHCFLPN 361
            YA+ GRF+QALRSI WMQQEG +PD+VTIAT +PVCA+++A K GKE+H + +K+ FLPN
Sbjct: 392  YAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPN 451

Query: 362  ISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNGSPCDALSVFRSMLQ 541
            +S+ TSLM MYS  G  +Y  RLF+++  RNV AWTA+ID Y + G       VFRSML 
Sbjct: 452  VSLVTSLMVMYSKCGVPEYPVRLFDRLEQRNVKAWTAMIDCYVETGDLRAGFEVFRSMLL 511

Query: 542  TKQRPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLESVPIVMAEVVKMYGKFRNVDN 721
            +K RPD V + R+L++C E+ ++K+G E+H  +LK + ES+P V A ++KMYG+  ++ +
Sbjct: 512  SKHRPDSVTMGRVLTVCSELKALKLGKELHGHILKKEFESIPFVSARIIKMYGQCGDLRS 571

Query: 722  ARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNGLVPNHYMFVVALRICEK 901
            A   +D +  KGSLT TAIIEAYG N ++++AI+ F+ M+S G  PN + F   L IC +
Sbjct: 572  ANFSFDTVVVKGSLTWTAIIEAYGCNGRFKDAINCFEKMISRGFTPNPFTFTAVLSICSQ 631

Query: 902  AGFVDSALRIFNMMIQEYDIKAS 970
            AGFVD A R FN+M++ Y+++ S
Sbjct: 632  AGFVDEAYRFFNLMLRVYNLQPS 654



 Score =  143 bits (361), Expect = 9e-32
 Identities = 82/301 (27%), Positives = 157/301 (52%), Gaps = 4/301 (1%)
 Frame = +2

Query: 5    GREVHGFVLKRSRYYHNMVFVLAGLINMYCKCGDMVSARRVFYGSHERNAVSWTALISGY 184
            G++VH  +  R     +  F+   L++MY  CG +  A++VF  S   N  SW AL+ G 
Sbjct: 129  GKQVHVHI--RINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGT 186

Query: 185  ASCG--RFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGKEMHAFTVKHCFLP 358
               G  R++  L +   M+++G+  ++ +++      A   A + G + HA  +K+    
Sbjct: 187  VISGKKRYQDVLSTFTEMREQGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFS 246

Query: 359  NISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNGSPCDALSVFRSML 538
            ++ + TSL+ MY   G +  + R+F+++  R+++ W A+I   + N    +AL +FR+M+
Sbjct: 247  SVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMI 306

Query: 539  QTKQ-RPDGVALARILSICGEIGSIKVGTEVHAQVLKMK-LESVPIVMAEVVKMYGKFRN 712
              +   P+ V L  IL + G++ ++K+G EVHA VLK K     P V + ++ +Y K  +
Sbjct: 307  SEEGIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKTKNYVEQPFVHSGLIDLYCKCGD 366

Query: 713  VDNARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNGLVPNHYMFVVALRI 892
            + + R V+ G   + +++ TA++  Y  N ++++A+     M   G  P+       L +
Sbjct: 367  MVSGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPV 426

Query: 893  C 895
            C
Sbjct: 427  C 427



 Score = 92.4 bits (228), Expect = 2e-16
 Identities = 65/254 (25%), Positives = 117/254 (46%), Gaps = 3/254 (1%)
 Frame = +2

Query: 140 HERNAVSWTALISGYASCGRFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGK 319
           H +N  S    I  +A     E AL  + +++Q GI  +  T +  +  C + K+   GK
Sbjct: 71  HSKNPCSIHRDIQSFARKNNLEDALTILDYLEQRGIPVNATTFSALLAACVRRKSLIHGK 130

Query: 320 EMHAFTVKHCFLPNISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNG 499
           ++H     +    N  + T L+ MY+A G++  + ++F++  + NV +W AL+     +G
Sbjct: 131 QVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISG 190

Query: 500 SP--CDALSVFRSMLQTKQRPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLESVPIV 673
                D LS F  M +     +  +L+ +        +++ G + HA  +K  L S   +
Sbjct: 191 KKRYQDVLSTFTEMREQGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFSSVFL 250

Query: 674 MAEVVKMYGKFRNVDNARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLS-NG 850
              +V MY K   V  AR V+D I  +  +   A+I     N +  EA+ +F +M+S  G
Sbjct: 251 KTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEG 310

Query: 851 LVPNHYMFVVALRI 892
           + PN  +    L +
Sbjct: 311 IYPNSVILTTILPV 324


>ref|XP_006664430.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
            chloroplastic-like [Oryza brachyantha]
          Length = 616

 Score =  367 bits (942), Expect = 4e-99
 Identities = 171/323 (52%), Positives = 240/323 (74%)
 Frame = +2

Query: 2    LGREVHGFVLKRSRYYHNMVFVLAGLINMYCKCGDMVSARRVFYGSHERNAVSWTALISG 181
            LGRE+H FVLK+ +   ++  + AGL++MYCKCGDM+S RRVFY + +RN VSWTAL+SG
Sbjct: 251  LGREIHAFVLKKFQDRKDVANIQAGLVDMYCKCGDMISGRRVFYSTKKRNVVSWTALMSG 310

Query: 182  YASCGRFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGKEMHAFTVKHCFLPN 361
            YAS GR +QALR I WMQQEGI+PD++ + T +PVC K+KA + GKE+HA+ ++  FLPN
Sbjct: 311  YASNGRQDQALRCILWMQQEGIRPDLIAVGTVLPVCTKLKALRKGKELHAYALRRWFLPN 370

Query: 362  ISISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNGSPCDALSVFRSMLQ 541
            +S+ TSL+TMY    ++DYS  +F+ M  + V AWTAL+D Y KNG P  A+ VFRSML 
Sbjct: 371  VSLCTSLITMYGTCSHLDYSQGVFHVMDKKTVQAWTALVDAYLKNGDPSTAVDVFRSMLL 430

Query: 542  TKQRPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLESVPIVMAEVVKMYGKFRNVDN 721
            + +RPD VA+ R+LS C + G+ K+G E+H Q LK+++E +P+V A ++ MYG   ++  
Sbjct: 431  SNRRPDAVAITRMLSACRDTGASKLGKELHGQALKLRMEPLPLVAAGLISMYGTCGDLKA 490

Query: 722  ARMVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNGLVPNHYMFVVALRICEK 901
            A+ V++  ++KGSLTCTAIIEAY  N ++++A+ +F  MLSN  VPN+  F V LRICE 
Sbjct: 491  AQRVFNRTESKGSLTCTAIIEAYAINQRHKDALELFAWMLSNRFVPNNGTFDVLLRICEA 550

Query: 902  AGFVDSALRIFNMMIQEYDIKAS 970
            AG  D AL++FN M+QEY+++AS
Sbjct: 551  AGLHDEALQVFNSMVQEYNLEAS 573



 Score =  157 bits (396), Expect = 8e-36
 Identities = 93/300 (31%), Positives = 156/300 (52%), Gaps = 3/300 (1%)
 Frame = +2

Query: 17   HGFVLKRSRYYHNMVFVLAGLINMYCKCGDMVSARRVFYGSHERNAVSWTALISGYASCG 196
            H  ++K + Y      ++ GL+++Y KCG +  A RVF    ER+ V+W A+I+G+A  G
Sbjct: 154  HAMLIKNA-YAGAPQMLMTGLMDVYFKCGKVKPAVRVFEEMPERDVVAWGAVIAGFAHKG 212

Query: 197  RFEQALRSIAWMQQEGIKPDIVTIATAIPVCAKMKASKPGKEMHAFTVKHCFLPN---IS 367
               +AL    WM ++GIK + V + + +PV  +++A   G+E+HAF +K  F       +
Sbjct: 213  MKREALEHFRWMVEDGIKVNSVVLTSVVPVIGELRARNLGREIHAFVLKK-FQDRKDVAN 271

Query: 368  ISTSLMTMYSALGNIDYSCRLFNKMPNRNVLAWTALIDTYSKNGSPCDALSVFRSMLQTK 547
            I   L+ MY   G++    R+F     RNV++WTAL+  Y+ NG    AL     M Q  
Sbjct: 272  IQAGLVDMYCKCGDMISGRRVFYSTKKRNVVSWTALMSGYASNGRQDQALRCILWMQQEG 331

Query: 548  QRPDGVALARILSICGEIGSIKVGTEVHAQVLKMKLESVPIVMAEVVKMYGKFRNVDNAR 727
             RPD +A+  +L +C ++ +++ G E+HA  L+        +   ++ MYG   ++D ++
Sbjct: 332  IRPDLIAVGTVLPVCTKLKALRKGKELHAYALRRWFLPNVSLCTSLITMYGTCSHLDYSQ 391

Query: 728  MVYDGIDNKGSLTCTAIIEAYGFNSQYEEAIHIFDSMLSNGLVPNHYMFVVALRICEKAG 907
             V+  +D K     TA+++AY  N     A+ +F SML +   P+       L  C   G
Sbjct: 392  GVFHVMDKKTVQAWTALVDAYLKNGDPSTAVDVFRSMLLSNRRPDAVAITRMLSACRDTG 451