BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00036119
         (237 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523876.1| pentatricopeptide repeat-containing protein,...    98   1e-18
ref|XP_004954053.1| PREDICTED: pentatricopeptide repeat-containi...    94   2e-17
gb|EXC37761.1| hypothetical protein L484_001219 [Morus notabilis]      92   5e-17
dbj|BAD16914.1| pentatricopeptide (PPR) repeat-containing protei...    92   9e-17
ref|NP_001048246.2| Os02g0769900 [Oryza sativa Japonica Group] g...    92   9e-17
ref|XP_003596872.1| Pentatricopeptide repeat-containing protein ...    91   2e-16
gb|ABD32771.1| Tetratricopeptide-like helical [Medicago truncatula]    91   2e-16
gb|AEP33748.1| chloroplast biogenesis 19, partial [Capsella burs...    90   3e-16
gb|AEP33745.1| chloroplast biogenesis 19, partial [Arabis hirsuta]     90   3e-16
ref|XP_002299777.1| pentatricopeptide repeat-containing family p...    90   3e-16
ref|XP_006303598.1| hypothetical protein CARUB_v10011161mg [Caps...    90   4e-16
gb|EAY87679.1| hypothetical protein OsI_09093 [Oryza sativa Indi...    90   4e-16
ref|XP_004487456.1| PREDICTED: pentatricopeptide repeat-containi...    89   5e-16
gb|AEP33747.1| chloroplast biogenesis 19, partial [Brassica oler...    89   8e-16
gb|AEP33746.1| chloroplast biogenesis 19, partial [Barbarea verna]     88   1e-15
ref|XP_006647969.1| PREDICTED: pentatricopeptide repeat-containi...    88   1e-15
ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containi...    88   1e-15
emb|CBI24422.3| unnamed protein product [Vitis vinifera]               88   1e-15
gb|AFW64322.1| hypothetical protein ZEAMMB73_176484 [Zea mays]         87   2e-15
gb|AEP33750.1| chloroplast biogenesis 19, partial [Lepidium sati...    87   2e-15

>ref|XP_002523876.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536964|gb|EEF38602.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 384

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 44/79 (55%), Positives = 61/79 (77%)
 Frame = -1

Query: 237 IAREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPEKDKVSWTVVINGCVKNDL 58
           +AR +FD + V+NSVS+NTMI GYMRN + GSA+ LFD MPEKD +SWTV I+G +K   
Sbjct: 150 LARLIFDDLKVKNSVSWNTMIDGYMRNGETGSAMELFDEMPEKDAISWTVFIDGFIKKGH 209

Query: 57  LEEALDYFRAMQLHQIDAD 1
            E+AL++FR MQ+ +++ D
Sbjct: 210 FEQALEWFREMQVSKVEPD 228


>ref|XP_004954053.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic-like [Setaria italica]
          Length = 496

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 43/79 (54%), Positives = 60/79 (75%)
 Frame = -1

Query: 237 IAREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPEKDKVSWTVVINGCVKNDL 58
           +A ++FD MPVR+ V++NTMI+G MRN  V +A  +FD MPE DKVSWT +I+GCVKN  
Sbjct: 125 VALQLFDSMPVRSIVTYNTMISGLMRNGLVDAAFEVFDGMPEPDKVSWTALIDGCVKNGR 184

Query: 57  LEEALDYFRAMQLHQIDAD 1
            ++A+D FRAM L+ ++ D
Sbjct: 185 HDDAIDCFRAMLLNGVEPD 203


>gb|EXC37761.1| hypothetical protein L484_001219 [Morus notabilis]
          Length = 508

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 44/79 (55%), Positives = 57/79 (72%)
 Frame = -1

Query: 237 IAREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPEKDKVSWTVVINGCVKNDL 58
           +AR VFD +  +NSVS+NTMI GYMRN KV  A+ +FD MPE+D VSWT +I G VK   
Sbjct: 138 VARLVFDDIKEKNSVSWNTMIDGYMRNGKVRDAVEVFDEMPERDAVSWTALIGGFVKRRR 197

Query: 57  LEEALDYFRAMQLHQIDAD 1
            EEAL++FR MQ+  ++ D
Sbjct: 198 FEEALEWFREMQVSSVEPD 216


>dbj|BAD16914.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group] gi|215704291|dbj|BAG93131.1|
           unnamed protein product [Oryza sativa Japonica Group]
          Length = 527

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 42/79 (53%), Positives = 59/79 (74%)
 Frame = -1

Query: 237 IAREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPEKDKVSWTVVINGCVKNDL 58
           +A ++FD MPVR++V++NT+I+G MRN  V +A  +FD MP  DKVSWT +I+GCVKN  
Sbjct: 157 LALQLFDAMPVRSAVTYNTVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGR 216

Query: 57  LEEALDYFRAMQLHQIDAD 1
            +EA+D FRAM L  ++ D
Sbjct: 217 HDEAIDCFRAMLLDGVEPD 235


>ref|NP_001048246.2| Os02g0769900 [Oryza sativa Japonica Group]
           gi|46805413|dbj|BAD16915.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|255671273|dbj|BAF10160.2| Os02g0769900 [Oryza
           sativa Japonica Group]
          Length = 438

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 42/79 (53%), Positives = 59/79 (74%)
 Frame = -1

Query: 237 IAREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPEKDKVSWTVVINGCVKNDL 58
           +A ++FD MPVR++V++NT+I+G MRN  V +A  +FD MP  DKVSWT +I+GCVKN  
Sbjct: 68  LALQLFDAMPVRSAVTYNTVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGR 127

Query: 57  LEEALDYFRAMQLHQIDAD 1
            +EA+D FRAM L  ++ D
Sbjct: 128 HDEAIDCFRAMLLDGVEPD 146


>ref|XP_003596872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|87240903|gb|ABD32761.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355485920|gb|AES67123.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 517

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 47/78 (60%), Positives = 56/78 (71%)
 Frame = -1

Query: 234 AREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPEKDKVSWTVVINGCVKNDLL 55
           AR VFD+M VRN VS+NTMI GYM+N  V  AL LFD++P K+ VSWTVVI G VK +  
Sbjct: 145 ARLVFDQMGVRNLVSWNTMIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECY 204

Query: 54  EEALDYFRAMQLHQIDAD 1
           EEAL+ FR MQL  +  D
Sbjct: 205 EEALECFREMQLAGVVPD 222


>gb|ABD32771.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 497

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 47/78 (60%), Positives = 56/78 (71%)
 Frame = -1

Query: 234 AREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPEKDKVSWTVVINGCVKNDLL 55
           AR VFD+M VRN VS+NTMI GYM+N  V  AL LFD++P K+ VSWTVVI G VK +  
Sbjct: 145 ARLVFDQMGVRNLVSWNTMIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECY 204

Query: 54  EEALDYFRAMQLHQIDAD 1
           EEAL+ FR MQL  +  D
Sbjct: 205 EEALECFREMQLAGVVPD 222


>gb|AEP33748.1| chloroplast biogenesis 19, partial [Capsella bursa-pastoris]
          Length = 489

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 43/78 (55%), Positives = 57/78 (73%)
 Frame = -1

Query: 234 AREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPEKDKVSWTVVINGCVKNDLL 55
           AR VFD M  +NSV++NTMI GYMRN +V +A+ +FD+MPE+D +SWT +ING VK    
Sbjct: 117 ARLVFDYMEDKNSVTWNTMIDGYMRNGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFH 176

Query: 54  EEALDYFRAMQLHQIDAD 1
           EEAL +FR MQ+  +  D
Sbjct: 177 EEALAWFREMQISGVKPD 194


>gb|AEP33745.1| chloroplast biogenesis 19, partial [Arabis hirsuta]
          Length = 435

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 44/78 (56%), Positives = 55/78 (70%)
 Frame = -1

Query: 234 AREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPEKDKVSWTVVINGCVKNDLL 55
           AR VFD M  +NSV++NTMI GYMRN +V  A+ LFD MPE+D +SWT +ING VK    
Sbjct: 71  ARLVFDYMEEKNSVTWNTMIDGYMRNGQVDDAVKLFDEMPERDLISWTAMINGFVKKGFH 130

Query: 54  EEALDYFRAMQLHQIDAD 1
           EEAL +FR MQ+  +  D
Sbjct: 131 EEALAWFREMQISGVKPD 148


>ref|XP_002299777.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222847035|gb|EEE84582.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 439

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 40/79 (50%), Positives = 59/79 (74%)
 Frame = -1

Query: 237 IAREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPEKDKVSWTVVINGCVKNDL 58
           ++R  FD + V+NS S+NTMI G++RN K+  A+ +FD MPE+  +SWTV+ING VK  L
Sbjct: 66  LSRLCFDELKVKNSFSWNTMIDGFVRNGKIREAIEVFDEMPERGVISWTVLINGFVKMGL 125

Query: 57  LEEALDYFRAMQLHQIDAD 1
            EEAL++FR MQ+ +++ D
Sbjct: 126 FEEALEWFRKMQVSKVEPD 144


>ref|XP_006303598.1| hypothetical protein CARUB_v10011161mg [Capsella rubella]
           gi|482572309|gb|EOA36496.1| hypothetical protein
           CARUB_v10011161mg [Capsella rubella]
          Length = 506

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 43/78 (55%), Positives = 57/78 (73%)
 Frame = -1

Query: 234 AREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPEKDKVSWTVVINGCVKNDLL 55
           AR VFD M  +NSV++NTMI GYMRN +V +A+ +FD+MPE+D +SWT +ING VK    
Sbjct: 134 ARLVFDYMEDKNSVTWNTMINGYMRNGQVDNAVKMFDKMPERDFISWTAMINGFVKKGFH 193

Query: 54  EEALDYFRAMQLHQIDAD 1
           EEAL +FR MQ+  +  D
Sbjct: 194 EEALAWFREMQISGVKPD 211


>gb|EAY87679.1| hypothetical protein OsI_09093 [Oryza sativa Indica Group]
          Length = 493

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 41/79 (51%), Positives = 59/79 (74%)
 Frame = -1

Query: 237 IAREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPEKDKVSWTVVINGCVKNDL 58
           +A ++FD MPVR++V++NT+I+G MRN  V +A  +FD MP  DKVSWT +I+GCVKN  
Sbjct: 123 LALQLFDAMPVRSAVTYNTVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGR 182

Query: 57  LEEALDYFRAMQLHQIDAD 1
            +EA++ FRAM L  ++ D
Sbjct: 183 HDEAINCFRAMLLDGVEPD 201


>ref|XP_004487456.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic-like [Cicer arietinum]
          Length = 512

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 45/78 (57%), Positives = 55/78 (70%)
 Frame = -1

Query: 234 AREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPEKDKVSWTVVINGCVKNDLL 55
           AR VFD+M VRN VS+NTMI GYM+N ++  AL LFD MP K+ VSWT +I G VK D  
Sbjct: 140 ARLVFDQMGVRNLVSWNTMIGGYMKNGEIEDALKLFDEMPMKNAVSWTSIIGGFVKRDCH 199

Query: 54  EEALDYFRAMQLHQIDAD 1
           EEA++ FR MQL  +  D
Sbjct: 200 EEAVECFREMQLDGVVPD 217


>gb|AEP33747.1| chloroplast biogenesis 19, partial [Brassica oleracea]
          Length = 485

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 43/78 (55%), Positives = 56/78 (71%)
 Frame = -1

Query: 234 AREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPEKDKVSWTVVINGCVKNDLL 55
           AR VFDR+  +NSV++NTMI GYMR+ +V  A  +FD MPE+D +SWT +ING VK  L 
Sbjct: 117 ARLVFDRVEDKNSVTWNTMIDGYMRSGRVDDAAKVFDEMPERDLISWTAMINGFVKKGLH 176

Query: 54  EEALDYFRAMQLHQIDAD 1
           EEAL +FR MQ+  +  D
Sbjct: 177 EEALAWFREMQVSGVKPD 194


>gb|AEP33746.1| chloroplast biogenesis 19, partial [Barbarea verna]
          Length = 494

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 43/78 (55%), Positives = 56/78 (71%)
 Frame = -1

Query: 234 AREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPEKDKVSWTVVINGCVKNDLL 55
           AR VFD M  +NSV++NTMI GYMR+ +V +A+ LFD MPE+D +SWT +ING VK    
Sbjct: 122 ARLVFDFMEDKNSVTWNTMIDGYMRSGQVNNAVKLFDEMPERDLISWTAMINGFVKKGFH 181

Query: 54  EEALDYFRAMQLHQIDAD 1
           EEAL +FR MQ+  +  D
Sbjct: 182 EEALAWFREMQISGVKPD 199


>ref|XP_006647969.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic-like [Oryza brachyantha]
          Length = 437

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 41/79 (51%), Positives = 57/79 (72%)
 Frame = -1

Query: 237 IAREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPEKDKVSWTVVINGCVKNDL 58
           +A ++FD MPVR++V++NT+I+G MRN  V  A  +FD MP  DKVSWT +I+GCVKN  
Sbjct: 68  LALQLFDSMPVRSAVTYNTVISGLMRNGLVDEAFEVFDGMPAPDKVSWTALIDGCVKNGR 127

Query: 57  LEEALDYFRAMQLHQIDAD 1
            +EA++ FRAM L  +  D
Sbjct: 128 HDEAIECFRAMLLDGVAPD 146


>ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic-like [Vitis vinifera]
          Length = 518

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 42/75 (56%), Positives = 55/75 (73%)
 Frame = -1

Query: 225 VFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPEKDKVSWTVVINGCVKNDLLEEA 46
           +FD M VRNSVS+NTMI G MRN +VG A+ LFD+M E+D +SWT +I G VK    E+A
Sbjct: 149 MFDEMHVRNSVSWNTMIDGCMRNGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQA 208

Query: 45  LDYFRAMQLHQIDAD 1
           L++FR MQL  ++ D
Sbjct: 209 LEWFREMQLAGVEPD 223


>emb|CBI24422.3| unnamed protein product [Vitis vinifera]
          Length = 502

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 42/75 (56%), Positives = 55/75 (73%)
 Frame = -1

Query: 225 VFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPEKDKVSWTVVINGCVKNDLLEEA 46
           +FD M VRNSVS+NTMI G MRN +VG A+ LFD+M E+D +SWT +I G VK    E+A
Sbjct: 149 MFDEMHVRNSVSWNTMIDGCMRNGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQA 208

Query: 45  LDYFRAMQLHQIDAD 1
           L++FR MQL  ++ D
Sbjct: 209 LEWFREMQLAGVEPD 223


>gb|AFW64322.1| hypothetical protein ZEAMMB73_176484 [Zea mays]
          Length = 496

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 42/79 (53%), Positives = 57/79 (72%)
 Frame = -1

Query: 237 IAREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPEKDKVSWTVVINGCVKNDL 58
           +A ++FD MPVR+ V++NTMI+G MRN  V +A  +FD MP  DKVSWT +I+G VKN  
Sbjct: 125 LALQLFDSMPVRSVVTYNTMISGLMRNGLVDAAFEVFDGMPGPDKVSWTALIDGFVKNGR 184

Query: 57  LEEALDYFRAMQLHQIDAD 1
            +EA+D FRAM L  ++ D
Sbjct: 185 HDEAIDCFRAMLLDGVETD 203


>gb|AEP33750.1| chloroplast biogenesis 19, partial [Lepidium sativum]
          Length = 494

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 42/78 (53%), Positives = 56/78 (71%)
 Frame = -1

Query: 234 AREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPEKDKVSWTVVINGCVKNDLL 55
           AR VFD M  +NSV++NTMI GYMRN +V +A+ +FD MPE+D +SWT +I G VK    
Sbjct: 125 ARLVFDYMEDKNSVTWNTMIDGYMRNGQVDNAVKVFDEMPERDLISWTAMITGFVKKGFH 184

Query: 54  EEALDYFRAMQLHQIDAD 1
           EEAL +FR MQ+  ++ D
Sbjct: 185 EEALAWFREMQISGVNPD 202