BLASTX nr result
ID: Zingiber23_contig00036089
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00036089
(296 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAR89852.1| putative polyprotein [Oryza sativa Japonica Group... 156 2e-36
gb|AAP73852.1| putative gag-pol polyprotein [Oryza sativa Japoni... 156 2e-36
gb|ABA98459.1| retrotransposon protein, putative, Ty3-gypsy subc... 155 5e-36
gb|ABA94586.1| retrotransposon protein, putative, Ty3-gypsy subc... 155 5e-36
emb|CAE02265.2| OSJNBb0049I21.5 [Oryza sativa Japonica Group] 155 5e-36
emb|CAD39728.2| OSJNBb0049I21.6 [Oryza sativa Japonica Group] 155 5e-36
emb|CAD41450.1| OSJNBa0019D11.8 [Oryza sativa Japonica Group] 155 5e-36
emb|CAH67609.1| OSIGBa0145G11.8 [Oryza sativa Indica Group] 155 5e-36
gb|ABA97430.1| retrotransposon protein, putative, Ty3-gypsy subc... 155 7e-36
gb|ABA97610.1| retrotransposon protein, putative, Ty3-gypsy subc... 155 7e-36
emb|CAE05392.1| OSJNBa0022F16.16 [Oryza sativa Japonica Group] 155 7e-36
gb|AAX92958.1| retrotransposon protein, putative, Ty3-gypsy sub-... 154 9e-36
gb|ABA95216.1| retrotransposon protein, putative, Ty3-gypsy subc... 154 1e-35
gb|AAM01060.1|AC091735_33 Putative retroelement [Oryza sativa Ja... 154 1e-35
gb|ABG22100.1| retrotransposon protein, putative, Ty3-gypsy subc... 154 1e-35
gb|ABA94813.1| retrotransposon protein, putative, Ty3-gypsy subc... 153 2e-35
gb|ABA93898.1| retrotransposon protein, putative, Ty3-gypsy subc... 153 2e-35
gb|ABA93560.1| retrotransposon protein, putative, Ty3-gypsy subc... 153 2e-35
gb|AAT81665.1| putative retrotransposon protein [Oryza sativa Ja... 153 2e-35
gb|AAT81698.1| putative retrotransposon protein, 5'-partial [Ory... 153 2e-35
>gb|AAR89852.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108711716|gb|ABF99511.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1312
Score = 156 bits (395), Expect = 2e-36
Identities = 70/97 (72%), Positives = 84/97 (86%)
Frame = +2
Query: 2 VYSHSEEEHAQHLRIVLEILRRHQLYAKFSKCAFWLSSVGFLGHVVSSRGISVDPQKIEA 181
+YS EEEHA+HLR+VLE LR+H+LYAKFSKC FWL V FLGHV+S+ G++VDP K+EA
Sbjct: 615 IYSKDEEEHAEHLRLVLEKLRKHKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEA 674
Query: 182 VTSWEQPKSVQEIRSFLGLAGYYRRFVEGFSRIAMPL 292
VT W+ PKSV EIRSFLGLAGYYRRF+EGFS+IA P+
Sbjct: 675 VTEWKAPKSVTEIRSFLGLAGYYRRFIEGFSKIARPM 711
>gb|AAP73852.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 823
Score = 156 bits (395), Expect = 2e-36
Identities = 70/97 (72%), Positives = 84/97 (86%)
Frame = +2
Query: 2 VYSHSEEEHAQHLRIVLEILRRHQLYAKFSKCAFWLSSVGFLGHVVSSRGISVDPQKIEA 181
+YS EEEHA+HLR+VLE LR+H+LYAKFSKC FWL V FLGHV+S+ G++VDP K+EA
Sbjct: 151 IYSKDEEEHAEHLRLVLEKLRKHKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEA 210
Query: 182 VTSWEQPKSVQEIRSFLGLAGYYRRFVEGFSRIAMPL 292
VT W+ PKSV EIRSFLGLAGYYRRF+EGFS+IA P+
Sbjct: 211 VTEWKAPKSVTEIRSFLGLAGYYRRFIEGFSKIARPM 247
>gb|ABA98459.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1470
Score = 155 bits (392), Expect = 5e-36
Identities = 69/97 (71%), Positives = 84/97 (86%)
Frame = +2
Query: 2 VYSHSEEEHAQHLRIVLEILRRHQLYAKFSKCAFWLSSVGFLGHVVSSRGISVDPQKIEA 181
+YS EEEHA+HLR+VL+ LR+H+LYAKFSKC FWL V FLGHV+S+ G++VDP K+EA
Sbjct: 700 IYSKDEEEHAEHLRLVLQKLRKHKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEA 759
Query: 182 VTSWEQPKSVQEIRSFLGLAGYYRRFVEGFSRIAMPL 292
VT W+ PKSV EIRSFLGLAGYYRRF+EGFS+IA P+
Sbjct: 760 VTEWKAPKSVTEIRSFLGLAGYYRRFIEGFSKIARPM 796
>gb|ABA94586.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1710
Score = 155 bits (392), Expect = 5e-36
Identities = 69/97 (71%), Positives = 84/97 (86%)
Frame = +2
Query: 2 VYSHSEEEHAQHLRIVLEILRRHQLYAKFSKCAFWLSSVGFLGHVVSSRGISVDPQKIEA 181
+YS EEEHA+HLR+VL+ LR+H+LYAKFSKC FWL V FLGHV+S+ G++VDP K+EA
Sbjct: 1063 IYSKDEEEHAEHLRLVLQKLRKHKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEA 1122
Query: 182 VTSWEQPKSVQEIRSFLGLAGYYRRFVEGFSRIAMPL 292
VT W+ PKSV EIRSFLGLAGYYRRF+EGFS+IA P+
Sbjct: 1123 VTEWKAPKSVTEIRSFLGLAGYYRRFIEGFSKIARPM 1159
>emb|CAE02265.2| OSJNBb0049I21.5 [Oryza sativa Japonica Group]
Length = 1644
Score = 155 bits (392), Expect = 5e-36
Identities = 70/97 (72%), Positives = 83/97 (85%)
Frame = +2
Query: 2 VYSHSEEEHAQHLRIVLEILRRHQLYAKFSKCAFWLSSVGFLGHVVSSRGISVDPQKIEA 181
+YS EEEHA+HLR+VLE LR+H+LYAKFSKC FWL V FLGHV+S+ G++VDP K+EA
Sbjct: 790 IYSKDEEEHAEHLRLVLEKLRKHKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPTKVEA 849
Query: 182 VTSWEQPKSVQEIRSFLGLAGYYRRFVEGFSRIAMPL 292
VT W+ PKSV EIRSFLGLAGYYRRF+EGFS IA P+
Sbjct: 850 VTEWKAPKSVTEIRSFLGLAGYYRRFIEGFSMIARPM 886
>emb|CAD39728.2| OSJNBb0049I21.6 [Oryza sativa Japonica Group]
Length = 1606
Score = 155 bits (392), Expect = 5e-36
Identities = 69/97 (71%), Positives = 84/97 (86%)
Frame = +2
Query: 2 VYSHSEEEHAQHLRIVLEILRRHQLYAKFSKCAFWLSSVGFLGHVVSSRGISVDPQKIEA 181
+YS EEEHA+HLR+VLE LR+H+LYAKFSKC FWL + FLGHV+S+ G++VDP K+EA
Sbjct: 633 IYSKDEEEHAEHLRLVLEKLRKHKLYAKFSKCEFWLKELAFLGHVISAGGVAVDPAKVEA 692
Query: 182 VTSWEQPKSVQEIRSFLGLAGYYRRFVEGFSRIAMPL 292
VT W+ PKSV EIRSFLGLAGYYRRF+EGFS+IA P+
Sbjct: 693 VTEWKAPKSVTEIRSFLGLAGYYRRFIEGFSKIARPM 729
>emb|CAD41450.1| OSJNBa0019D11.8 [Oryza sativa Japonica Group]
Length = 1470
Score = 155 bits (392), Expect = 5e-36
Identities = 69/97 (71%), Positives = 84/97 (86%)
Frame = +2
Query: 2 VYSHSEEEHAQHLRIVLEILRRHQLYAKFSKCAFWLSSVGFLGHVVSSRGISVDPQKIEA 181
+YS EEEHA+HLR+VL+ LR+H+LYAKFSKC FWL V FLGHV+S+ G++VDP K+EA
Sbjct: 700 IYSKDEEEHAEHLRLVLQKLRKHKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEA 759
Query: 182 VTSWEQPKSVQEIRSFLGLAGYYRRFVEGFSRIAMPL 292
VT W+ PKSV EIRSFLGLAGYYRRF+EGFS+IA P+
Sbjct: 760 VTEWKAPKSVTEIRSFLGLAGYYRRFIEGFSKIARPM 796
>emb|CAH67609.1| OSIGBa0145G11.8 [Oryza sativa Indica Group]
Length = 1470
Score = 155 bits (392), Expect = 5e-36
Identities = 69/97 (71%), Positives = 84/97 (86%)
Frame = +2
Query: 2 VYSHSEEEHAQHLRIVLEILRRHQLYAKFSKCAFWLSSVGFLGHVVSSRGISVDPQKIEA 181
+YS EEEHA+HLR+VL+ LR+H+LYAKFSKC FWL V FLGHV+S+ G++VDP K+EA
Sbjct: 700 IYSKDEEEHAEHLRLVLQKLRKHKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEA 759
Query: 182 VTSWEQPKSVQEIRSFLGLAGYYRRFVEGFSRIAMPL 292
VT W+ PKSV EIRSFLGLAGYYRRF+EGFS+IA P+
Sbjct: 760 VTEWKAPKSVTEIRSFLGLAGYYRRFIEGFSKIARPM 796
>gb|ABA97430.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1226
Score = 155 bits (391), Expect = 7e-36
Identities = 69/97 (71%), Positives = 83/97 (85%)
Frame = +2
Query: 2 VYSHSEEEHAQHLRIVLEILRRHQLYAKFSKCAFWLSSVGFLGHVVSSRGISVDPQKIEA 181
+YS EEEH +HLR+VLE LR+H+LYAKFSKC FWL V FLGHV+S+ G++VDP K+EA
Sbjct: 549 IYSKDEEEHVEHLRLVLEKLRKHKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEA 608
Query: 182 VTSWEQPKSVQEIRSFLGLAGYYRRFVEGFSRIAMPL 292
VT W+ PKSV EIRSFLGLAGYYRRF+EGFS+IA P+
Sbjct: 609 VTKWKAPKSVTEIRSFLGLAGYYRRFIEGFSKIARPM 645
>gb|ABA97610.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1030
Score = 155 bits (391), Expect = 7e-36
Identities = 69/97 (71%), Positives = 84/97 (86%)
Frame = +2
Query: 2 VYSHSEEEHAQHLRIVLEILRRHQLYAKFSKCAFWLSSVGFLGHVVSSRGISVDPQKIEA 181
+YS EEEHA+HLR+VLE LR+H+LYAKFSKC FWL V FLGHV+S+ G++VDP K+EA
Sbjct: 396 IYSKDEEEHAEHLRLVLEKLRKHKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPTKVEA 455
Query: 182 VTSWEQPKSVQEIRSFLGLAGYYRRFVEGFSRIAMPL 292
VT W+ PKSV EI+SFLGLAGYYRRF+EGFS+IA P+
Sbjct: 456 VTEWKAPKSVTEIQSFLGLAGYYRRFIEGFSKIARPM 492
>emb|CAE05392.1| OSJNBa0022F16.16 [Oryza sativa Japonica Group]
Length = 1402
Score = 155 bits (391), Expect = 7e-36
Identities = 69/97 (71%), Positives = 84/97 (86%)
Frame = +2
Query: 2 VYSHSEEEHAQHLRIVLEILRRHQLYAKFSKCAFWLSSVGFLGHVVSSRGISVDPQKIEA 181
+YS EEEHA+HLR+VLE LR+H+LYAKFSKC FWL V FLGHV+S+ G++VDP K+EA
Sbjct: 635 IYSKDEEEHAEHLRLVLEKLRKHKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEA 694
Query: 182 VTSWEQPKSVQEIRSFLGLAGYYRRFVEGFSRIAMPL 292
VT W+ PKSV EI+SFLGLAGYYRRF+EGFS+IA P+
Sbjct: 695 VTEWKAPKSVTEIQSFLGLAGYYRRFIEGFSKIARPM 731
>gb|AAX92958.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group] gi|77550032|gb|ABA92829.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 669
Score = 154 bits (390), Expect = 9e-36
Identities = 68/97 (70%), Positives = 84/97 (86%)
Frame = +2
Query: 2 VYSHSEEEHAQHLRIVLEILRRHQLYAKFSKCAFWLSSVGFLGHVVSSRGISVDPQKIEA 181
+YS EEEHA+HLR+VLE LR+H+LYAKFSKC FWL V FLGHV+S+ G++VDP K+EA
Sbjct: 220 IYSKDEEEHAEHLRLVLEKLRKHKLYAKFSKCEFWLEEVAFLGHVISAGGVAVDPAKVEA 279
Query: 182 VTSWEQPKSVQEIRSFLGLAGYYRRFVEGFSRIAMPL 292
+T W+ PKSV +IRSFLGLAGYYRRF+EGFS+IA P+
Sbjct: 280 ITEWKAPKSVTKIRSFLGLAGYYRRFIEGFSKIARPI 316
>gb|ABA95216.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 522
Score = 154 bits (389), Expect = 1e-35
Identities = 69/97 (71%), Positives = 84/97 (86%)
Frame = +2
Query: 2 VYSHSEEEHAQHLRIVLEILRRHQLYAKFSKCAFWLSSVGFLGHVVSSRGISVDPQKIEA 181
+YS EEEHA+HL++VLE LR+H+LYAKFSKC FWL V FLGHV+S+ G++VDP K+EA
Sbjct: 37 IYSKDEEEHAEHLQLVLEKLRKHKLYAKFSKCEFWLKEVTFLGHVISAGGVAVDPAKVEA 96
Query: 182 VTSWEQPKSVQEIRSFLGLAGYYRRFVEGFSRIAMPL 292
VT W+ PKSV EIRSFLGLAGYYRRF+EGFS+IA P+
Sbjct: 97 VTEWKAPKSVTEIRSFLGLAGYYRRFIEGFSKIARPM 133
>gb|AAM01060.1|AC091735_33 Putative retroelement [Oryza sativa Japonica Group]
gi|21672044|gb|AAM74406.1|AC120497_6 Putative
retroelement [Oryza sativa Japonica Group]
gi|31430958|gb|AAP52803.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 986
Score = 154 bits (389), Expect = 1e-35
Identities = 68/97 (70%), Positives = 83/97 (85%)
Frame = +2
Query: 2 VYSHSEEEHAQHLRIVLEILRRHQLYAKFSKCAFWLSSVGFLGHVVSSRGISVDPQKIEA 181
+YS EEEHA+HLR+VLE LR+H+LYAKFSKC FWL V FLGH++S+ G+ VDP K+EA
Sbjct: 216 IYSKDEEEHAKHLRLVLEKLRKHKLYAKFSKCEFWLKEVAFLGHIISAGGVVVDPAKVEA 275
Query: 182 VTSWEQPKSVQEIRSFLGLAGYYRRFVEGFSRIAMPL 292
+T W+ PKSV EIRSFLGLAGYYRRF+EGFS+IA P+
Sbjct: 276 ITEWKAPKSVTEIRSFLGLAGYYRRFIEGFSKIARPM 312
>gb|ABG22100.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1620
Score = 154 bits (389), Expect = 1e-35
Identities = 69/97 (71%), Positives = 83/97 (85%)
Frame = +2
Query: 2 VYSHSEEEHAQHLRIVLEILRRHQLYAKFSKCAFWLSSVGFLGHVVSSRGISVDPQKIEA 181
+Y EEEHA+HLR+VLE LR+H+LYAKFSKC FWL V FLGHV+S+ G++VDP K+EA
Sbjct: 907 IYFKDEEEHAEHLRLVLEKLRKHKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEA 966
Query: 182 VTSWEQPKSVQEIRSFLGLAGYYRRFVEGFSRIAMPL 292
VT W+ PKSV EIRSFLGLAGYYRRF+EGFS+IA P+
Sbjct: 967 VTEWKAPKSVTEIRSFLGLAGYYRRFIEGFSKIARPM 1003
>gb|ABA94813.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1712
Score = 153 bits (387), Expect = 2e-35
Identities = 68/97 (70%), Positives = 83/97 (85%)
Frame = +2
Query: 2 VYSHSEEEHAQHLRIVLEILRRHQLYAKFSKCAFWLSSVGFLGHVVSSRGISVDPQKIEA 181
+YS EEEHA+HLR+VL+ LR+H+LY KFSKC FWL V FLGHV+S+ G++VDP K+EA
Sbjct: 1041 IYSKDEEEHAEHLRLVLQKLRKHKLYKKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEA 1100
Query: 182 VTSWEQPKSVQEIRSFLGLAGYYRRFVEGFSRIAMPL 292
VT W+ PKSV EIRSFLGLAGYYRRF+EGFS+IA P+
Sbjct: 1101 VTEWKAPKSVTEIRSFLGLAGYYRRFIEGFSKIARPM 1137
>gb|ABA93898.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 879
Score = 153 bits (387), Expect = 2e-35
Identities = 70/97 (72%), Positives = 83/97 (85%)
Frame = +2
Query: 2 VYSHSEEEHAQHLRIVLEILRRHQLYAKFSKCAFWLSSVGFLGHVVSSRGISVDPQKIEA 181
+YS EEEHA+HLR+VLE LR+H+LYAKFSKC FWL V FLGHVVS+ G++VDP KIEA
Sbjct: 573 IYSKDEEEHAKHLRLVLEKLRKHKLYAKFSKCEFWLKEVAFLGHVVSAGGVAVDPAKIEA 632
Query: 182 VTSWEQPKSVQEIRSFLGLAGYYRRFVEGFSRIAMPL 292
VT W+ PK V EIRSFLGLAGYYRRF+EGFS++A P+
Sbjct: 633 VTEWKAPKFVTEIRSFLGLAGYYRRFIEGFSKMARPM 669
>gb|ABA93560.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1469
Score = 153 bits (387), Expect = 2e-35
Identities = 68/97 (70%), Positives = 84/97 (86%)
Frame = +2
Query: 2 VYSHSEEEHAQHLRIVLEILRRHQLYAKFSKCAFWLSSVGFLGHVVSSRGISVDPQKIEA 181
+YS EEEHA+HL++VLE LR+H+LYAKFSKC FWL V FLGHV+S+ G++VDP K+EA
Sbjct: 700 IYSKDEEEHAEHLQLVLEKLRKHKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEA 759
Query: 182 VTSWEQPKSVQEIRSFLGLAGYYRRFVEGFSRIAMPL 292
VT W+ PKSV EIRSFLGLAGYYRRF++GFS+IA P+
Sbjct: 760 VTEWKAPKSVTEIRSFLGLAGYYRRFIKGFSKIARPM 796
>gb|AAT81665.1| putative retrotransposon protein [Oryza sativa Japonica Group]
gi|108709836|gb|ABF97631.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2784
Score = 153 bits (387), Expect = 2e-35
Identities = 67/97 (69%), Positives = 84/97 (86%)
Frame = +2
Query: 2 VYSHSEEEHAQHLRIVLEILRRHQLYAKFSKCAFWLSSVGFLGHVVSSRGISVDPQKIEA 181
+YS ++EEH +HLR+ LE LR HQLYAKFSKC FWLS V FLGHV+S+RG++VDP +E+
Sbjct: 1682 IYSRTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISARGVAVDPSNVES 1741
Query: 182 VTSWEQPKSVQEIRSFLGLAGYYRRFVEGFSRIAMPL 292
VT+W+QPK+V EIRSFLGLAGYYRRF+E FS+IA P+
Sbjct: 1742 VTNWKQPKTVSEIRSFLGLAGYYRRFIENFSKIAKPM 1778
>gb|AAT81698.1| putative retrotransposon protein, 5'-partial [Oryza sativa Japonica
Group]
Length = 1633
Score = 153 bits (387), Expect = 2e-35
Identities = 67/97 (69%), Positives = 84/97 (86%)
Frame = +2
Query: 2 VYSHSEEEHAQHLRIVLEILRRHQLYAKFSKCAFWLSSVGFLGHVVSSRGISVDPQKIEA 181
+YS ++EEH +HLR+ LE LR HQLYAKFSKC FWLS V FLGHV+S+RG++VDP +E+
Sbjct: 531 IYSRTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISARGVAVDPSNVES 590
Query: 182 VTSWEQPKSVQEIRSFLGLAGYYRRFVEGFSRIAMPL 292
VT+W+QPK+V EIRSFLGLAGYYRRF+E FS+IA P+
Sbjct: 591 VTNWKQPKTVSEIRSFLGLAGYYRRFIENFSKIAKPM 627