BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00036005
         (758 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japo...   357   2e-96
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g...   357   2e-96
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S...   355   1e-95
ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [A...   348   1e-93
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s...   347   3e-93
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s...   345   9e-93
ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III s...   344   2e-92
gb|EMS65169.1| DNA-directed RNA polymerase III subunit rpc1 [Tri...   339   5e-91
gb|EMT01541.1| DNA-directed RNA polymerase III subunit RPC1 [Aeg...   338   1e-90
ref|XP_003570766.1| PREDICTED: DNA-directed RNA polymerase III s...   324   2e-86
ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s...   319   6e-85
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s...   319   6e-85
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s...   316   5e-84
ref|XP_004294640.1| PREDICTED: DNA-directed RNA polymerase III s...   311   1e-82
gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Mor...   307   3e-81
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s...   306   6e-81
gb|ACJ63307.1| RNA polymerase III large subunit [Asparagus offic...   305   8e-81
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s...   302   9e-80
ref|XP_002531828.1| DNA-directed RNA polymerase III largest subu...   298   1e-78
gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao]          294   2e-77

>gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japonica Group]
          Length = 1321

 Score =  357 bits (916), Expect = 2e-96
 Identities = 178/252 (70%), Positives = 206/252 (81%)
 Frame = +3

Query: 3    AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSIYYDQT 182
            AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLS++YDQT
Sbjct: 759  AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQT 818

Query: 183  VRNASGGVVQFLYGGDGMDPAKMEGRDGIPLNLDQLFMKIMATCPPREKNMLSPTEISNF 362
            VRNASGG+VQFLYG DGMDPAKMEG+DG PLNLDQLFMK+MATCP R +N LSP EI   
Sbjct: 819  VRNASGGIVQFLYGDDGMDPAKMEGKDGKPLNLDQLFMKVMATCPQRGQNTLSPGEILQI 878

Query: 363  VDDRLAKHDMSPEGGCSDCFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENV 542
            ++D+L++HD S + GCS+ F +LL+ F+  R     +TR++L LDE  V  + S+  E++
Sbjct: 879  LNDKLSEHDASSDDGCSEKFKQLLTYFLEDRIKLLKSTRRALLLDEDHVGERHSSFEESI 938

Query: 543  AANISGISPRQLEVFLETCISRYHSKKVEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVA 722
            AANISGIS +QL+VFL+TC+SRYH KK+E              EPGTQMTLKTFHFAGVA
Sbjct: 939  AANISGISVKQLQVFLDTCLSRYHLKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVA 998

Query: 723  SMNVTLGVPRIK 758
            SMNVTLGVPRIK
Sbjct: 999  SMNVTLGVPRIK 1010


>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
            gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
            Japonica Group] gi|38347455|emb|CAD41360.2|
            OSJNBa0076N16.24 [Oryza sativa Japonica Group]
            gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
            Japonica Group] gi|116310339|emb|CAH67354.1|
            OSIGBa0130B08.14 [Oryza sativa Indica Group]
            gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
            Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|218195112|gb|EEC77539.1| hypothetical protein
            OsI_16437 [Oryza sativa Indica Group]
          Length = 1383

 Score =  357 bits (916), Expect = 2e-96
 Identities = 178/252 (70%), Positives = 206/252 (81%)
 Frame = +3

Query: 3    AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSIYYDQT 182
            AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLS++YDQT
Sbjct: 821  AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQT 880

Query: 183  VRNASGGVVQFLYGGDGMDPAKMEGRDGIPLNLDQLFMKIMATCPPREKNMLSPTEISNF 362
            VRNASGG+VQFLYG DGMDPAKMEG+DG PLNLDQLFMK+MATCP R +N LSP EI   
Sbjct: 881  VRNASGGIVQFLYGDDGMDPAKMEGKDGKPLNLDQLFMKVMATCPQRGQNTLSPGEILQI 940

Query: 363  VDDRLAKHDMSPEGGCSDCFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENV 542
            ++D+L++HD S + GCS+ F +LL+ F+  R     +TR++L LDE  V  + S+  E++
Sbjct: 941  LNDKLSEHDASSDDGCSEKFKQLLTYFLEDRIKLLKSTRRALLLDEDHVGERHSSFEESI 1000

Query: 543  AANISGISPRQLEVFLETCISRYHSKKVEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVA 722
            AANISGIS +QL+VFL+TC+SRYH KK+E              EPGTQMTLKTFHFAGVA
Sbjct: 1001 AANISGISVKQLQVFLDTCLSRYHLKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVA 1060

Query: 723  SMNVTLGVPRIK 758
            SMNVTLGVPRIK
Sbjct: 1061 SMNVTLGVPRIK 1072


>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
            gi|241937900|gb|EES11045.1| hypothetical protein
            SORBIDRAFT_06g021120 [Sorghum bicolor]
          Length = 1391

 Score =  355 bits (910), Expect = 1e-95
 Identities = 179/252 (71%), Positives = 202/252 (80%)
 Frame = +3

Query: 3    AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSIYYDQT 182
            AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLS++YDQT
Sbjct: 828  AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQT 887

Query: 183  VRNASGGVVQFLYGGDGMDPAKMEGRDGIPLNLDQLFMKIMATCPPREKNMLSPTEISNF 362
            VRNASGG+VQFLYG DGMDPAKMEG+DG+PLNLDQLFMK+MATCP R  + LSP  I   
Sbjct: 888  VRNASGGIVQFLYGDDGMDPAKMEGKDGMPLNLDQLFMKVMATCPQRGSDTLSPEAIKQM 947

Query: 363  VDDRLAKHDMSPEGGCSDCFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENV 542
            ++D+L +HD S +GGCS+ F K L+ F+ KR      TR++L L E  VE K S   E+V
Sbjct: 948  LEDKLLQHDTSSDGGCSEEFKKNLTEFLDKRIELMKCTRRALHLHEDHVEKKDSCVEESV 1007

Query: 543  AANISGISPRQLEVFLETCISRYHSKKVEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVA 722
            AA ISGIS +QL+VFL+TC+SRY SKK+E              EPGTQMTLKTFHFAGVA
Sbjct: 1008 AAIISGISAKQLQVFLDTCLSRYQSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVA 1067

Query: 723  SMNVTLGVPRIK 758
            SMNVTLGVPRIK
Sbjct: 1068 SMNVTLGVPRIK 1079


>ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [Amborella trichopoda]
            gi|548832896|gb|ERM95665.1| hypothetical protein
            AMTR_s00023p00196820 [Amborella trichopoda]
          Length = 1383

 Score =  348 bits (892), Expect = 1e-93
 Identities = 174/252 (69%), Positives = 199/252 (78%)
 Frame = +3

Query: 3    AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSIYYDQT 182
            AKGFVANSFYTGLTA EFFFHTMGGREGLVDTAVKTA+TGY+SRRL+K LEDLS +YD T
Sbjct: 821  AKGFVANSFYTGLTAAEFFFHTMGGREGLVDTAVKTADTGYLSRRLIKSLEDLSTHYDDT 880

Query: 183  VRNASGGVVQFLYGGDGMDPAKMEGRDGIPLNLDQLFMKIMATCPPREKNMLSPTEISNF 362
            VRN+SG ++QF YG DGMDPAKMEG+ G+PLNLD+LFMKI ATCP      LSP+EIS  
Sbjct: 881  VRNSSGTIIQFSYGDDGMDPAKMEGKSGVPLNLDRLFMKIKATCPASVSASLSPSEISTI 940

Query: 363  VDDRLAKHDMSPEGGCSDCFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENV 542
            V+DRL+KHDM+PE GCS  F + LSNF+ KR  A   TR  L LDE  V+ ++ + LE+V
Sbjct: 941  VNDRLSKHDMTPERGCSMAFKEELSNFIKKRMDAIKKTRNMLGLDEDCVDKEKFSGLEHV 1000

Query: 543  AANISGISPRQLEVFLETCISRYHSKKVEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVA 722
            AANISGIS +QL VFLETCISRYH K++E              EPGTQMTLKTFHFAGVA
Sbjct: 1001 AANISGISRQQLRVFLETCISRYHLKRIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVA 1060

Query: 723  SMNVTLGVPRIK 758
            SMN+TLGVPRIK
Sbjct: 1061 SMNITLGVPRIK 1072


>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
            brachyantha]
          Length = 1389

 Score =  347 bits (889), Expect = 3e-93
 Identities = 180/269 (66%), Positives = 206/269 (76%), Gaps = 17/269 (6%)
 Frame = +3

Query: 3    AKGFVANSFYTGLTATEFFFHTM-----------------GGREGLVDTAVKTAETGYMS 131
            AKGFVANSFY GLTATEFFFHTM                 GGREGLVDTAVKTAETGYMS
Sbjct: 815  AKGFVANSFYNGLTATEFFFHTMGGIYIVLPATEFFFHTMGGREGLVDTAVKTAETGYMS 874

Query: 132  RRLMKGLEDLSIYYDQTVRNASGGVVQFLYGGDGMDPAKMEGRDGIPLNLDQLFMKIMAT 311
            RRLMKGLEDLS++YDQTVRNASGG+VQFLYG DGMDPAKMEG DG PLNLDQLFMK+MAT
Sbjct: 875  RRLMKGLEDLSVFYDQTVRNASGGIVQFLYGDDGMDPAKMEGEDGKPLNLDQLFMKVMAT 934

Query: 312  CPPREKNMLSPTEISNFVDDRLAKHDMSPEGGCSDCFNKLLSNFVHKRAAAFANTRKSLQ 491
            CP R +N LSP EI   ++D+L++HD S + GCS+ F +LL +F+  R     +TR++L 
Sbjct: 935  CPQRGQNTLSPGEILQILNDKLSEHDASSDDGCSEKFKQLLKDFLEDRIKLLKSTRRALC 994

Query: 492  LDEAVVEGKRSTALENVAANISGISPRQLEVFLETCISRYHSKKVEXXXXXXXXXXXXXX 671
            LDE  V GK S+  E++AANISGIS +QL+VFL+TC+SRYHSKK+E              
Sbjct: 995  LDENHV-GKDSSIEESIAANISGISAKQLQVFLDTCLSRYHSKKIEAGASIGAIGAQSIG 1053

Query: 672  EPGTQMTLKTFHFAGVASMNVTLGVPRIK 758
            EPGTQMTLKTFHFAGVASMNVTLGVPRIK
Sbjct: 1054 EPGTQMTLKTFHFAGVASMNVTLGVPRIK 1082


>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Setaria
            italica]
          Length = 1397

 Score =  345 bits (885), Expect = 9e-93
 Identities = 174/252 (69%), Positives = 197/252 (78%)
 Frame = +3

Query: 3    AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSIYYDQT 182
            AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLS++YDQT
Sbjct: 834  AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQT 893

Query: 183  VRNASGGVVQFLYGGDGMDPAKMEGRDGIPLNLDQLFMKIMATCPPREKNMLSPTEISNF 362
            VRNASGG+VQFLYG DGMDPAKMEG+DG PLNLDQLFMK+ ATCP R  + LSP +I   
Sbjct: 894  VRNASGGIVQFLYGDDGMDPAKMEGKDGTPLNLDQLFMKVTATCPHRGLDTLSPDDIKQM 953

Query: 363  VDDRLAKHDMSPEGGCSDCFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENV 542
            ++D+L +H  S +GGCS+ F + L  F+ +R      TRK+L LDE  V    S   E +
Sbjct: 954  LEDKLTQHKTSSDGGCSEEFKECLKKFLEERIQLLKCTRKALHLDEKHVGKNDSCIEEII 1013

Query: 543  AANISGISPRQLEVFLETCISRYHSKKVEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVA 722
            AANISGIS +QL+VFL+TC SRY+SK +E              EPGTQMTLKTFHFAGVA
Sbjct: 1014 AANISGISAKQLQVFLDTCFSRYNSKAIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVA 1073

Query: 723  SMNVTLGVPRIK 758
            SMNVTLGVPRIK
Sbjct: 1074 SMNVTLGVPRIK 1085


>ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
            [Brachypodium distachyon]
          Length = 1392

 Score =  344 bits (883), Expect = 2e-92
 Identities = 175/252 (69%), Positives = 199/252 (78%)
 Frame = +3

Query: 3    AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSIYYDQT 182
            AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLS++YDQT
Sbjct: 828  AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQT 887

Query: 183  VRNASGGVVQFLYGGDGMDPAKMEGRDGIPLNLDQLFMKIMATCPPREKNMLSPTEISNF 362
            VRNAS G+VQF+YG DGMDP KMEG+ G PLNLDQLFMK+ ATCP R  +MLSP  I   
Sbjct: 888  VRNASSGIVQFVYGDDGMDPVKMEGKGGSPLNLDQLFMKVKATCPQRGHDMLSPEAIMQM 947

Query: 363  VDDRLAKHDMSPEGGCSDCFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENV 542
            ++D+L++ DMS  GGCSD F +LL+ F   R     +TR++L LDE  V  K S+  E +
Sbjct: 948  LNDKLSEQDMS-SGGCSDKFKELLTKFFEDRIKMLRSTRRTLHLDEDHVGMKDSSIEERI 1006

Query: 543  AANISGISPRQLEVFLETCISRYHSKKVEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVA 722
            AANISGIS +QL+VFL+TC+SRYHSK +E              EPGTQMTLKTFHFAGVA
Sbjct: 1007 AANISGISAKQLQVFLDTCLSRYHSKIIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVA 1066

Query: 723  SMNVTLGVPRIK 758
            SMNVTLGVPRIK
Sbjct: 1067 SMNVTLGVPRIK 1078


>gb|EMS65169.1| DNA-directed RNA polymerase III subunit rpc1 [Triticum urartu]
          Length = 1248

 Score =  339 bits (870), Expect = 5e-91
 Identities = 178/258 (68%), Positives = 200/258 (77%), Gaps = 6/258 (2%)
 Frame = +3

Query: 3    AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSIYYDQT 182
            AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLS++YDQT
Sbjct: 677  AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQT 736

Query: 183  VRNASGGVVQFLYGGDGMDPAKMEGRDGIPLNLDQLFMKIMATCPPREKNMLSPTEISNF 362
            VRNASGG+VQF+YG DGMDP KMEG+ G PLNLDQLFMK+MATCP R    LSP  IS  
Sbjct: 737  VRNASGGIVQFVYGDDGMDPVKMEGKGGNPLNLDQLFMKVMATCPQRGHETLSPEAISQM 796

Query: 363  VDDRLAKHDMSPEGGCSDCFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENV 542
            ++D+L++ D S  GGCSD F +LL+ FV  R     NTR++L LDE  V  K S+  E V
Sbjct: 797  LNDKLSEQDPS-AGGCSDRFKELLTKFVGNRIKMLRNTRRALHLDEDHVGRKDSSIEECV 855

Query: 543  AANISGISPRQLEVFLETCISRYHSKKVEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVA 722
            AANISGIS +QL+VFL+TC+SRYHSK +E              EPGTQMTLKTFHFAGVA
Sbjct: 856  AANISGISAKQLQVFLDTCLSRYHSKIIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVA 915

Query: 723  SMN------VTLGVPRIK 758
            SM+      VTLGVPRIK
Sbjct: 916  SMSILSVLYVTLGVPRIK 933


>gb|EMT01541.1| DNA-directed RNA polymerase III subunit RPC1 [Aegilops tauschii]
          Length = 1117

 Score =  338 bits (867), Expect = 1e-90
 Identities = 177/258 (68%), Positives = 200/258 (77%), Gaps = 6/258 (2%)
 Frame = +3

Query: 3    AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSIYYDQT 182
            AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLS++YDQT
Sbjct: 546  AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQT 605

Query: 183  VRNASGGVVQFLYGGDGMDPAKMEGRDGIPLNLDQLFMKIMATCPPREKNMLSPTEISNF 362
            VRNASGG+VQF+YG DGMDP KMEG+ G PLNLDQLFMK+MATCP R    LSP  IS  
Sbjct: 606  VRNASGGIVQFVYGDDGMDPVKMEGKGGNPLNLDQLFMKVMATCPQRGHETLSPEAISQM 665

Query: 363  VDDRLAKHDMSPEGGCSDCFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENV 542
            ++D+L++ D S  GGCSD F +LL+ FV  R     NTR++L LDE  V  K S+  E V
Sbjct: 666  LNDKLSEQDPS-AGGCSDRFKELLTKFVGNRIKMLRNTRRALHLDEDHVGRKDSSIEECV 724

Query: 543  AANISGISPRQLEVFLETCISRYHSKKVEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVA 722
            AANISGI+ +QL+VFL+TC+SRYHSK +E              EPGTQMTLKTFHFAGVA
Sbjct: 725  AANISGIAAKQLQVFLDTCLSRYHSKIIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVA 784

Query: 723  SMN------VTLGVPRIK 758
            SM+      VTLGVPRIK
Sbjct: 785  SMSILSVLYVTLGVPRIK 802


>ref|XP_003570766.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
            [Brachypodium distachyon]
          Length = 1400

 Score =  324 bits (831), Expect = 2e-86
 Identities = 165/252 (65%), Positives = 193/252 (76%)
 Frame = +3

Query: 3    AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSIYYDQT 182
            AKGFVANSFYTGLTA+EFFFHTMGGREGLVDTAVKTA+TGY+SRRLMKGLEDLS++YDQT
Sbjct: 831  AKGFVANSFYTGLTASEFFFHTMGGREGLVDTAVKTADTGYLSRRLMKGLEDLSVFYDQT 890

Query: 183  VRNASGGVVQFLYGGDGMDPAKMEGRDGIPLNLDQLFMKIMATCPPREKNMLSPTEISNF 362
            VRNASGG+VQF+YG DGMDP KMEG+ G PLNLDQLFMK+ ATCP R  + LSP  I   
Sbjct: 891  VRNASGGIVQFVYGDDGMDPVKMEGKGGSPLNLDQLFMKVKATCPQRGHDTLSPDVILQM 950

Query: 363  VDDRLAKHDMSPEGGCSDCFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENV 542
             +D L K + S  G CSD   ++L+ F+  R     +TR++L +DE  V  + S+  E +
Sbjct: 951  FNDTLFKQETS-SGRCSDKLKEMLTKFLEDRVKMLRSTRRALHIDEDHVGRRDSSVEECI 1009

Query: 543  AANISGISPRQLEVFLETCISRYHSKKVEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVA 722
            AA+ISGIS +QL+VFL+TC SRYHSK +E              EPGTQMTLKTFHFAGVA
Sbjct: 1010 AADISGISAKQLQVFLDTCFSRYHSKIIEAGASVGPIGAHSIGEPGTQMTLKTFHFAGVA 1069

Query: 723  SMNVTLGVPRIK 758
            SMNVTLGVPRIK
Sbjct: 1070 SMNVTLGVPRIK 1081


>ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X2 [Solanum tuberosum]
          Length = 1243

 Score =  319 bits (818), Expect = 6e-85
 Identities = 163/253 (64%), Positives = 191/253 (75%), Gaps = 1/253 (0%)
 Frame = +3

Query: 3    AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSIYYDQT 182
            AKGFVA+SF+ GL+ATEFFFHTMGGREGLVDTAVKTA+TGYMSRRLMK LEDL++YYD T
Sbjct: 822  AKGFVAHSFFDGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDST 881

Query: 183  VRNASGGVVQFLYGGDGMDPAKMEGRDGIPLNLDQLFMKIMATCPPREKNMLSPTEISNF 362
            VRNAS  +VQF+YG DGMDP++ME + G PLN  +LFMK+ ATCPP  +  LS +EI   
Sbjct: 882  VRNASACIVQFMYGDDGMDPSQMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEI 941

Query: 363  VDDRLAKHDMSPEGGCSDCFNKLLSNFVHKR-AAAFANTRKSLQLDEAVVEGKRSTALEN 539
            V++RL+ HDM+PEGGCS+ F   LS+F+ K  A    N R+SL L E   EG     LE 
Sbjct: 942  VNERLSYHDMTPEGGCSEAFRSSLSDFLIKNLAETLKNLRESLLLGEEQYEGDDRGYLEK 1001

Query: 540  VAANISGISPRQLEVFLETCISRYHSKKVEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGV 719
            +A NISGI+ RQL+VFL TCISRYH K++E              EPGTQMTLKTFHFAGV
Sbjct: 1002 IALNISGITKRQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGV 1061

Query: 720  ASMNVTLGVPRIK 758
            ASMNVTLGVPRIK
Sbjct: 1062 ASMNVTLGVPRIK 1074


>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Solanum tuberosum]
          Length = 1394

 Score =  319 bits (818), Expect = 6e-85
 Identities = 163/253 (64%), Positives = 191/253 (75%), Gaps = 1/253 (0%)
 Frame = +3

Query: 3    AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSIYYDQT 182
            AKGFVA+SF+ GL+ATEFFFHTMGGREGLVDTAVKTA+TGYMSRRLMK LEDL++YYD T
Sbjct: 822  AKGFVAHSFFDGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDST 881

Query: 183  VRNASGGVVQFLYGGDGMDPAKMEGRDGIPLNLDQLFMKIMATCPPREKNMLSPTEISNF 362
            VRNAS  +VQF+YG DGMDP++ME + G PLN  +LFMK+ ATCPP  +  LS +EI   
Sbjct: 882  VRNASACIVQFMYGDDGMDPSQMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEI 941

Query: 363  VDDRLAKHDMSPEGGCSDCFNKLLSNFVHKR-AAAFANTRKSLQLDEAVVEGKRSTALEN 539
            V++RL+ HDM+PEGGCS+ F   LS+F+ K  A    N R+SL L E   EG     LE 
Sbjct: 942  VNERLSYHDMTPEGGCSEAFRSSLSDFLIKNLAETLKNLRESLLLGEEQYEGDDRGYLEK 1001

Query: 540  VAANISGISPRQLEVFLETCISRYHSKKVEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGV 719
            +A NISGI+ RQL+VFL TCISRYH K++E              EPGTQMTLKTFHFAGV
Sbjct: 1002 IALNISGITKRQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGV 1061

Query: 720  ASMNVTLGVPRIK 758
            ASMNVTLGVPRIK
Sbjct: 1062 ASMNVTLGVPRIK 1074


>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Solanum
            lycopersicum]
          Length = 1390

 Score =  316 bits (810), Expect = 5e-84
 Identities = 161/253 (63%), Positives = 190/253 (75%), Gaps = 1/253 (0%)
 Frame = +3

Query: 3    AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSIYYDQT 182
            AKGFVA+SF+ GL+ATEFFFHTMGGREGLVDTAVKTA+TGYMSRRLMK LEDL++YYD T
Sbjct: 822  AKGFVAHSFFDGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDST 881

Query: 183  VRNASGGVVQFLYGGDGMDPAKMEGRDGIPLNLDQLFMKIMATCPPREKNMLSPTEISNF 362
            VRNAS  +VQF+YG DGMDP++ME + G PLN  +LFMK+ ATCPP  +  LS +EI   
Sbjct: 882  VRNASACIVQFMYGDDGMDPSRMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEI 941

Query: 363  VDDRLAKHDMSPEGGCSDCFNKLLSNFVHKR-AAAFANTRKSLQLDEAVVEGKRSTALEN 539
            V++RL+ HDM+PEGGCS+ F   LS+F+ K  A    N R+SL L E   EG     LE 
Sbjct: 942  VNERLSYHDMTPEGGCSEAFRASLSDFLIKSLAETLKNLRESLLLGEEQYEGDDRGYLEK 1001

Query: 540  VAANISGISPRQLEVFLETCISRYHSKKVEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGV 719
            +  NISGI+ +QL+VFL TCISRYH K++E              EPGTQMTLKTFHFAGV
Sbjct: 1002 IVLNISGITKKQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGV 1061

Query: 720  ASMNVTLGVPRIK 758
            ASMNVTLGVPRIK
Sbjct: 1062 ASMNVTLGVPRIK 1074


>ref|XP_004294640.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
            [Fragaria vesca subsp. vesca]
          Length = 1390

 Score =  311 bits (798), Expect = 1e-82
 Identities = 155/252 (61%), Positives = 188/252 (74%)
 Frame = +3

Query: 3    AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSIYYDQT 182
            AKGFVA+SFY+GLTATEFFFHTMGGREGLVDTAVKTA+TGYMSRRL K LEDLS+ YD+T
Sbjct: 829  AKGFVASSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLSKVLEDLSVQYDKT 888

Query: 183  VRNASGGVVQFLYGGDGMDPAKMEGRDGIPLNLDQLFMKIMATCPPREKNMLSPTEISNF 362
            VR A+GG+VQF YG DGMDPA MEG+ G PL+  +LF +  ATCP  E   LSP E+S  
Sbjct: 889  VRAANGGIVQFCYGDDGMDPAMMEGKSGAPLDFYRLFFRAKATCPAGESESLSPDEVSEI 948

Query: 363  VDDRLAKHDMSPEGGCSDCFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENV 542
            V  RL++ DM+P+GGCS  F   +  F+ +   A   T+++  L+++     +S  L+N+
Sbjct: 949  VRSRLSEQDMTPDGGCSMGFKSSIEQFLDEYVKALRKTQEAFLLNQSPGWEVKSATLQNI 1008

Query: 543  AANISGISPRQLEVFLETCISRYHSKKVEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVA 722
              NISG++PRQL+VFL+TCISRYHSKKV+              EPGTQMTLKTFHFAGVA
Sbjct: 1009 VQNISGVTPRQLKVFLDTCISRYHSKKVDAGTAIGVIGAQSIGEPGTQMTLKTFHFAGVA 1068

Query: 723  SMNVTLGVPRIK 758
            SMNVTLGVPRIK
Sbjct: 1069 SMNVTLGVPRIK 1080


>gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Morus notabilis]
          Length = 1179

 Score =  307 bits (786), Expect = 3e-81
 Identities = 152/252 (60%), Positives = 182/252 (72%)
 Frame = +3

Query: 3    AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSIYYDQT 182
            AKGFV++SFY GL+ATEFFFHTMGGREGLVDTAVKTA+TGYMSRRL+K LEDL ++YD T
Sbjct: 613  AKGFVSHSFYDGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLFVHYDNT 672

Query: 183  VRNASGGVVQFLYGGDGMDPAKMEGRDGIPLNLDQLFMKIMATCPPREKNMLSPTEISNF 362
            VRNAS  ++QF YG DGMDPA MEG++G PLN ++LF+K  ATCP      LSP ++S  
Sbjct: 673  VRNASACIIQFCYGDDGMDPAHMEGKNGAPLNFERLFLKAKATCPAGGTEKLSPEKVSEL 732

Query: 363  VDDRLAKHDMSPEGGCSDCFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENV 542
            V+ RL+K DM+PEGGCS  F   L +F+     AF  T    +  E   + + S   +N+
Sbjct: 733  VESRLSKKDMTPEGGCSAAFKNSLKSFLDNYVKAFKRTWDPCESTEGHAKMENSATTKNI 792

Query: 543  AANISGISPRQLEVFLETCISRYHSKKVEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVA 722
               +SG + RQLEVFL+TCISRYHSKK+E              EPGTQMTLKTFHFAGVA
Sbjct: 793  VLQLSGATARQLEVFLDTCISRYHSKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVA 852

Query: 723  SMNVTLGVPRIK 758
            SMNVTLGVPRIK
Sbjct: 853  SMNVTLGVPRIK 864


>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
            vinifera]
          Length = 1383

 Score =  306 bits (783), Expect = 6e-81
 Identities = 161/252 (63%), Positives = 186/252 (73%)
 Frame = +3

Query: 3    AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSIYYDQT 182
            AKGFVA+SFYTGLTATEFFFHTMGGREGLVDTAVKTA+TGYMSRRLMK LEDLSI YD+T
Sbjct: 827  AKGFVASSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDET 886

Query: 183  VRNASGGVVQFLYGGDGMDPAKMEGRDGIPLNLDQLFMKIMATCPPREKNMLSPTEISNF 362
            VRNA+G +VQFLYG DGMDPA+MEG+DG PLN ++LF+K+ ATCP  E   LS  +I   
Sbjct: 887  VRNANGSIVQFLYGDDGMDPARMEGKDGFPLNFNRLFLKVKATCPAGENASLSALQIEET 946

Query: 363  VDDRLAKHDMSPEGGCSDCFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENV 542
            V  RL +H+ S E GCSD F   LS F+ +    F NTR++L L    V  +     E  
Sbjct: 947  V-KRLKEHNTSAE-GCSDAFKTNLSGFLEECKEKFKNTREALGLHGEHVGEENLDIQEKF 1004

Query: 543  AANISGISPRQLEVFLETCISRYHSKKVEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVA 722
            A NISGI+ +QL+VFL+TCISRY  K++E              EPGTQMTLKTFHFAGVA
Sbjct: 1005 AKNISGITSKQLQVFLDTCISRYQLKRIEAGTAIGAIGAHSIGEPGTQMTLKTFHFAGVA 1064

Query: 723  SMNVTLGVPRIK 758
            SMNVTLGVPRIK
Sbjct: 1065 SMNVTLGVPRIK 1076


>gb|ACJ63307.1| RNA polymerase III large subunit [Asparagus officinalis]
          Length = 544

 Score =  305 bits (782), Expect = 8e-81
 Identities = 154/226 (68%), Positives = 178/226 (78%)
 Frame = +3

Query: 3   AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSIYYDQT 182
           AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS+YYDQT
Sbjct: 321 AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSLYYDQT 380

Query: 183 VRNASGGVVQFLYGGDGMDPAKMEGRDGIPLNLDQLFMKIMATCPPREKNMLSPTEISNF 362
           VR+++GGVVQF+YG DGMDPAKMEG +G PLNLDQL+ K+MATCP R ++ LSP+EI   
Sbjct: 381 VRSSNGGVVQFIYGDDGMDPAKMEGENGTPLNLDQLYKKVMATCPCRPQDSLSPSEIICL 440

Query: 363 VDDRLAKHDMSPEGGCSDCFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENV 542
           +++RL+K+DM+PEGGCS  F  LL +F+HK  A    TR  LQL E   E   S+ LENV
Sbjct: 441 INERLSKYDMTPEGGCSSAFKNLLLDFLHKHVAELRKTRIRLQLQEDHKE--TSSVLENV 498

Query: 543 AANISGISPRQLEVFLETCISRYHSKKVEXXXXXXXXXXXXXXEPG 680
           AANISGIS +QL+VF+ETCISRYH KK+E              EPG
Sbjct: 499 AANISGISAQQLKVFMETCISRYHKKKLEAGAAIGAIGAQSIGEPG 544


>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
            sativus]
          Length = 1400

 Score =  302 bits (773), Expect = 9e-80
 Identities = 158/261 (60%), Positives = 190/261 (72%), Gaps = 9/261 (3%)
 Frame = +3

Query: 3    AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSIYYDQT 182
            AKGFVANSFY+GLTATEFFFHTMGGREGLVDTAVKTA+TGYMSRRL+K LEDLSI+YD +
Sbjct: 827  AKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSS 886

Query: 183  VRNASGGVVQFLYGGDGMDPAKMEGRDGIPLNLDQLFMKIMATCPPREKNMLSPTEISNF 362
            VRNA G +VQF YG DGMDPA+MEG+ G PLN ++LF+K  ATCP     +LSP+E S  
Sbjct: 887  VRNAGGCIVQFCYGDDGMDPAQMEGKSGAPLNFERLFLKAKATCPSDGNKILSPSEFSET 946

Query: 363  VDDRLAKHDMSPEGGCSDCFNKLLSNFVHKRAAAFANTRKSLQLD-EAVVEGKRSTALEN 539
            V+DRL+K D SPE GCS  F   L  F++K   A   +  +L  D E+ V+    ++ +N
Sbjct: 947  VEDRLSKDDASPECGCSPAFVGSLKIFLNKYVEAQKKSWGTLLADNESAVDKSIISSSDN 1006

Query: 540  --------VAANISGISPRQLEVFLETCISRYHSKKVEXXXXXXXXXXXXXXEPGTQMTL 695
                    V  NI+G++ RQL+VFL+TC+SRYH+KK+E              EPGTQMTL
Sbjct: 1007 DNIVIRNKVVQNIAGVTHRQLQVFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTL 1066

Query: 696  KTFHFAGVASMNVTLGVPRIK 758
            KTFHFAGVASMNVTLGVPRIK
Sbjct: 1067 KTFHFAGVASMNVTLGVPRIK 1087


>ref|XP_002531828.1| DNA-directed RNA polymerase III largest subunit, putative [Ricinus
            communis] gi|223528524|gb|EEF30548.1| DNA-directed RNA
            polymerase III largest subunit, putative [Ricinus
            communis]
          Length = 1383

 Score =  298 bits (763), Expect = 1e-78
 Identities = 156/261 (59%), Positives = 188/261 (72%), Gaps = 9/261 (3%)
 Frame = +3

Query: 3    AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSIYYDQT 182
            AKGFVANSFY+GL ATEFFFHTM GREGLVDTAVKTA+TGYMSRRL+KGLEDLSI YD T
Sbjct: 808  AKGFVANSFYSGLMATEFFFHTMAGREGLVDTAVKTADTGYMSRRLIKGLEDLSIQYDNT 867

Query: 183  VRNASGGVVQFLYGGDGMDPAKMEGRDGIPLNLDQLFMKIMATCPPREKNMLSPTEISNF 362
            VRNASG +VQFLYG DG+DPA MEG+ G+PLNLD+LF K+ ATCP RE++ LSP +IS+ 
Sbjct: 868  VRNASGCIVQFLYGDDGLDPASMEGKGGVPLNLDRLFSKVKATCPVREEDYLSPLDISDV 927

Query: 363  VDDRLAKHDMSPEGGCSDCFNKLLSNFVHKRAAAFANTRK---------SLQLDEAVVEG 515
            V++ L KHDM+  G CS+ F K L++F+   A    +  K         S  +    + G
Sbjct: 928  VENLLLKHDMALGGICSEAFKKSLTSFLGSHAKRLESMMKLADGVEDPTSENIQTGGIRG 987

Query: 516  KRSTALENVAANISGISPRQLEVFLETCISRYHSKKVEXXXXXXXXXXXXXXEPGTQMTL 695
              S  +E +A  I G+S RQ+EVF++TCI+RY  K+VE              EPGTQMTL
Sbjct: 988  -NSKIIERLAHKIFGVSERQIEVFVKTCINRYLWKRVEPGTAIGAIGAQSIGEPGTQMTL 1046

Query: 696  KTFHFAGVASMNVTLGVPRIK 758
            KTFHFAGVASMN+T GVPRIK
Sbjct: 1047 KTFHFAGVASMNITQGVPRIK 1067


>gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao]
          Length = 1395

 Score =  294 bits (753), Expect = 2e-77
 Identities = 155/252 (61%), Positives = 177/252 (70%)
 Frame = +3

Query: 3    AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSIYYDQT 182
            AKGFVANSFY+GLTATEFFFHTM GREGLVDTAVKTAETGYMSRRL+K LEDLSI+YD T
Sbjct: 833  AKGFVANSFYSGLTATEFFFHTMAGREGLVDTAVKTAETGYMSRRLIKALEDLSIHYDNT 892

Query: 183  VRNASGGVVQFLYGGDGMDPAKMEGRDGIPLNLDQLFMKIMATCPPREKNMLSPTEISNF 362
            VRNASG +VQF+YG DGMDPA MEG+ G PLN D+L MK+ ATCPP E+  L    I   
Sbjct: 893  VRNASGCIVQFIYGDDGMDPACMEGKSGFPLNFDRLLMKVKATCPPIEQKCLHVGSIMQM 952

Query: 363  VDDRLAKHDMSPEGGCSDCFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENV 542
            ++++LAKHD  P G CS+ F K L  F+  +        K +         ++S  LE V
Sbjct: 953  LEEQLAKHD--PAGVCSEAFKKSLKGFLKSQTNELDRVMKLVNNC-----AQKSEILEKV 1005

Query: 543  AANISGISPRQLEVFLETCISRYHSKKVEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVA 722
               ISGIS RQLEVF+ TCISRY SK +E              EPGTQMTLKTFHFAGVA
Sbjct: 1006 GHKISGISDRQLEVFVSTCISRYRSKVIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVA 1065

Query: 723  SMNVTLGVPRIK 758
            SMN+T GVPRIK
Sbjct: 1066 SMNITQGVPRIK 1077