BLASTX nr result
ID: Zingiber23_contig00036004
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00036004
(234 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s... 99 8e-19
gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japo... 98 1e-18
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g... 98 1e-18
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S... 96 4e-18
tpg|DAA37177.1| TPA: putative DNA-directed RNA polymerase family... 90 4e-16
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s... 89 5e-16
ref|XP_002974416.1| hypothetical protein SELMODRAFT_442419 [Sela... 87 3e-15
ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Sela... 87 3e-15
ref|XP_002951663.1| hypothetical protein VOLCADRAFT_81566 [Volvo... 78 1e-12
ref|XP_005842512.1| hypothetical protein GUITHDRAFT_156792 [Guil... 75 1e-11
ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III s... 74 2e-11
ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi... 74 2e-11
ref|XP_004338971.1| ferrochelatase [Acanthamoeba castellanii str... 73 5e-11
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s... 72 6e-11
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr... 72 6e-11
gb|EMS65535.1| DNA-directed RNA polymerase III subunit RPC1 [Tri... 72 8e-11
ref|XP_001416093.1| predicted protein [Ostreococcus lucimarinus ... 72 8e-11
ref|XP_002502032.1| predicted protein [Micromonas sp. RCC299] gi... 72 1e-10
gb|ETP40691.1| hypothetical protein F442_12013, partial [Phytoph... 71 1e-10
gb|ETI42839.1| hypothetical protein F443_12095, partial [Phytoph... 71 1e-10
>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Setaria
italica]
Length = 1397
Score = 98.6 bits (244), Expect = 8e-19
Identities = 50/76 (65%), Positives = 62/76 (81%)
Frame = -3
Query: 232 NEENVFSARIVKSKIEKTTLGEVATAIKVVLKPGQQCISIKLDMDLIEALHMGISAESVR 53
+ ++V SARIVK +EK LGEVA+AIK+VLK Q + +KLDM LIEALHMGISA+SV+
Sbjct: 1105 SRKDVLSARIVKGAMEKAVLGEVASAIKIVLKSSQPNLVVKLDMQLIEALHMGISADSVQ 1164
Query: 52 HSILSHPKIKLKEQHV 5
SIL+HPKIKLK +HV
Sbjct: 1165 LSILNHPKIKLKSEHV 1180
>gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japonica Group]
Length = 1321
Score = 97.8 bits (242), Expect = 1e-18
Identities = 50/76 (65%), Positives = 61/76 (80%)
Frame = -3
Query: 232 NEENVFSARIVKSKIEKTTLGEVATAIKVVLKPGQQCISIKLDMDLIEALHMGISAESVR 53
+E++V SARIVK +EK LGEVA AIK+VLK Q + +KLDM IEALHMGISA+SV+
Sbjct: 1030 SEKDVLSARIVKGSMEKAVLGEVAEAIKIVLKSSQPNLVVKLDMQRIEALHMGISADSVQ 1089
Query: 52 HSILSHPKIKLKEQHV 5
SIL+HPKIKLK +HV
Sbjct: 1090 LSILNHPKIKLKSEHV 1105
>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
Japonica Group] gi|38347455|emb|CAD41360.2|
OSJNBa0076N16.24 [Oryza sativa Japonica Group]
gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
Japonica Group] gi|116310339|emb|CAH67354.1|
OSIGBa0130B08.14 [Oryza sativa Indica Group]
gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218195112|gb|EEC77539.1| hypothetical protein
OsI_16437 [Oryza sativa Indica Group]
Length = 1383
Score = 97.8 bits (242), Expect = 1e-18
Identities = 50/76 (65%), Positives = 61/76 (80%)
Frame = -3
Query: 232 NEENVFSARIVKSKIEKTTLGEVATAIKVVLKPGQQCISIKLDMDLIEALHMGISAESVR 53
+E++V SARIVK +EK LGEVA AIK+VLK Q + +KLDM IEALHMGISA+SV+
Sbjct: 1092 SEKDVLSARIVKGSMEKAVLGEVAEAIKIVLKSSQPNLVVKLDMQRIEALHMGISADSVQ 1151
Query: 52 HSILSHPKIKLKEQHV 5
SIL+HPKIKLK +HV
Sbjct: 1152 LSILNHPKIKLKSEHV 1167
>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
gi|241937900|gb|EES11045.1| hypothetical protein
SORBIDRAFT_06g021120 [Sorghum bicolor]
Length = 1391
Score = 96.3 bits (238), Expect = 4e-18
Identities = 48/76 (63%), Positives = 62/76 (81%)
Frame = -3
Query: 232 NEENVFSARIVKSKIEKTTLGEVATAIKVVLKPGQQCISIKLDMDLIEALHMGISAESVR 53
++++V SARIVK +EK LGEVA AI++VLK Q + +KLDM LIE+LHMGISA+SV+
Sbjct: 1099 SKKDVLSARIVKGSMEKAVLGEVAVAIQIVLKSSQPNLIVKLDMQLIESLHMGISADSVQ 1158
Query: 52 HSILSHPKIKLKEQHV 5
SIL+HPKIKLK +HV
Sbjct: 1159 LSILNHPKIKLKSEHV 1174
>tpg|DAA37177.1| TPA: putative DNA-directed RNA polymerase family protein [Zea mays]
Length = 336
Score = 89.7 bits (221), Expect = 4e-16
Identities = 45/76 (59%), Positives = 57/76 (75%)
Frame = -3
Query: 232 NEENVFSARIVKSKIEKTTLGEVATAIKVVLKPGQQCISIKLDMDLIEALHMGISAESVR 53
+ ++V SARIVK +EK LGEVA I+ VLK + +KLDM LIE LHMGISA+SV+
Sbjct: 44 SRKDVLSARIVKGSMEKAVLGEVAATIQTVLKSSLPNLVVKLDMQLIETLHMGISADSVK 103
Query: 52 HSILSHPKIKLKEQHV 5
SIL+HPK+KLK +HV
Sbjct: 104 LSILNHPKLKLKSEHV 119
>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
brachyantha]
Length = 1389
Score = 89.4 bits (220), Expect = 5e-16
Identities = 45/74 (60%), Positives = 57/74 (77%)
Frame = -3
Query: 226 ENVFSARIVKSKIEKTTLGEVATAIKVVLKPGQQCISIKLDMDLIEALHMGISAESVRHS 47
++V SAR+VK +EK LGEVA IK+VLK Q + +KLDM IE LHMGISA+SV+ S
Sbjct: 1104 KDVLSARVVKGSMEKAVLGEVAEDIKIVLKSSQPNLVVKLDMQRIEDLHMGISADSVQLS 1163
Query: 46 ILSHPKIKLKEQHV 5
IL+HP+IKLK +HV
Sbjct: 1164 ILNHPRIKLKSEHV 1177
>ref|XP_002974416.1| hypothetical protein SELMODRAFT_442419 [Selaginella moellendorffii]
gi|300158014|gb|EFJ24638.1| hypothetical protein
SELMODRAFT_442419 [Selaginella moellendorffii]
Length = 1348
Score = 86.7 bits (213), Expect = 3e-15
Identities = 46/79 (58%), Positives = 60/79 (75%), Gaps = 3/79 (3%)
Frame = -3
Query: 232 NEENVFSARIVKSKIEKTTLGEVATAIKVVLKPGQQCISIKLDMDLIEALHMGISAESVR 53
+E +V +ARIVK +IEKT LG+VA +IK+VL+PGQ +SIKLDMD I +L + I AE+V
Sbjct: 1107 SENDVKAARIVKGRIEKTALGDVAKSIKIVLRPGQAFVSIKLDMDRIYSLQLDIRAETVA 1166
Query: 52 HSILSHPKI---KLKEQHV 5
++L PKI KLKEQHV
Sbjct: 1167 EAVLKFPKIKSMKLKEQHV 1185
>ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Selaginella moellendorffii]
gi|300146624|gb|EFJ13293.1| hypothetical protein
SELMODRAFT_446351 [Selaginella moellendorffii]
Length = 1393
Score = 86.7 bits (213), Expect = 3e-15
Identities = 46/79 (58%), Positives = 60/79 (75%), Gaps = 3/79 (3%)
Frame = -3
Query: 232 NEENVFSARIVKSKIEKTTLGEVATAIKVVLKPGQQCISIKLDMDLIEALHMGISAESVR 53
+E +V +ARIVK +IEKT LG+VA +IK+VL+PGQ +SIKLDMD I +L + I AE+V
Sbjct: 1103 SENDVKAARIVKGRIEKTALGDVAKSIKIVLRPGQAFVSIKLDMDRIYSLQLDIRAETVA 1162
Query: 52 HSILSHPKI---KLKEQHV 5
++L PKI KLKEQHV
Sbjct: 1163 EAVLKFPKIKSMKLKEQHV 1181
>ref|XP_002951663.1| hypothetical protein VOLCADRAFT_81566 [Volvox carteri f. nagariensis]
gi|300262911|gb|EFJ47114.1| hypothetical protein
VOLCADRAFT_81566 [Volvox carteri f. nagariensis]
Length = 1365
Score = 78.2 bits (191), Expect = 1e-12
Identities = 44/97 (45%), Positives = 60/97 (61%), Gaps = 24/97 (24%)
Frame = -3
Query: 223 NVFSARIVKSKIEKTTLGEVATAIKVVLKPG------------------------QQCIS 116
+V +AR+VK ++EKTTLG+VA IK+VLKPG + IS
Sbjct: 1035 DVKAARLVKGRLEKTTLGQVARHIKIVLKPGRGGGDAMTMPGSGGAYGGGPRLHGEAVIS 1094
Query: 115 IKLDMDLIEALHMGISAESVRHSILSHPKIKLKEQHV 5
I+LDM I+AL + I +V++SIL+HPK+KLKEQHV
Sbjct: 1095 IRLDMASIDALQLDIDGHTVKYSILAHPKLKLKEQHV 1131
>ref|XP_005842512.1| hypothetical protein GUITHDRAFT_156792 [Guillardia theta CCMP2712]
gi|428186682|gb|EKX55532.1| hypothetical protein
GUITHDRAFT_156792 [Guillardia theta CCMP2712]
Length = 1281
Score = 74.7 bits (182), Expect = 1e-11
Identities = 34/75 (45%), Positives = 54/75 (72%)
Frame = -3
Query: 229 EENVFSARIVKSKIEKTTLGEVATAIKVVLKPGQQCISIKLDMDLIEALHMGISAESVRH 50
+ + +ARI+K +IE+TTLG+VA IK V P + + +KLDM ++ L + +SA +V+
Sbjct: 1019 DRDEINARIIKGRIERTTLGQVAKYIKQVFAPSRCYVVVKLDMQCVQDLQLNLSASTVKK 1078
Query: 49 SILSHPKIKLKEQHV 5
+ILS PK+K+KEQH+
Sbjct: 1079 AILSDPKLKVKEQHI 1093
>ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Brachypodium distachyon]
Length = 1392
Score = 74.3 bits (181), Expect = 2e-11
Identities = 39/67 (58%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Frame = -3
Query: 202 VKSKIEKTTLGEVATAIKVVLKPGQQCISIKLDMDLIEAL-HMGISAESVRHSILSHPKI 26
VK +EK LGEVA IK+VLK Q + +KLDM IEA +MGIS++SV+ SI+ HPKI
Sbjct: 1108 VKRYVEKVVLGEVAAVIKIVLKSSQPNLVVKLDMQRIEAQGYMGISSDSVQQSIIRHPKI 1167
Query: 25 KLKEQHV 5
KLK +HV
Sbjct: 1168 KLKSEHV 1174
>ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi|162691719|gb|EDQ78080.1|
predicted protein [Physcomitrella patens]
Length = 1397
Score = 74.3 bits (181), Expect = 2e-11
Identities = 38/70 (54%), Positives = 53/70 (75%)
Frame = -3
Query: 214 SARIVKSKIEKTTLGEVATAIKVVLKPGQQCISIKLDMDLIEALHMGISAESVRHSILSH 35
+ARIVK +IEKTTLGEVA +IK VL+ Q IS+KLDM I+AL + I++++V +I+
Sbjct: 1116 AARIVKGRIEKTTLGEVAKSIKTVLRASQAIISVKLDMKRIDALQLDINSDTVALAIVQT 1175
Query: 34 PKIKLKEQHV 5
PKIKLK ++
Sbjct: 1176 PKIKLKHVNI 1185
>ref|XP_004338971.1| ferrochelatase [Acanthamoeba castellanii str. Neff]
gi|440795844|gb|ELR16958.1| ferrochelatase [Acanthamoeba
castellanii str. Neff]
Length = 472
Score = 72.8 bits (177), Expect = 5e-11
Identities = 38/69 (55%), Positives = 49/69 (71%)
Frame = -3
Query: 211 ARIVKSKIEKTTLGEVATAIKVVLKPGQQCISIKLDMDLIEALHMGISAESVRHSILSHP 32
ARIVK +IEKTTLGEV+ IK V PG IS+KLD D I AL + I++ SV +IL+ P
Sbjct: 163 ARIVKGRIEKTTLGEVSEYIKEVYNPGGCYISVKLDKDAIRALQLEINSASVMRAILNSP 222
Query: 31 KIKLKEQHV 5
+ K+K +HV
Sbjct: 223 RTKIKAEHV 231
>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1|
PREDICTED: DNA-directed RNA polymerase III subunit
rpc1-like isoform X2 [Citrus sinensis]
Length = 1404
Score = 72.4 bits (176), Expect = 6e-11
Identities = 36/74 (48%), Positives = 53/74 (71%)
Frame = -3
Query: 226 ENVFSARIVKSKIEKTTLGEVATAIKVVLKPGQQCISIKLDMDLIEALHMGISAESVRHS 47
+N +AR+VK +IEKT LG+VA +IK+V+ I I LDM+ I+ H+ I+A+ V+ S
Sbjct: 1107 DNENAARVVKGRIEKTLLGQVAKSIKIVMTSRLASIVIALDMETIQDAHLCINADIVKES 1166
Query: 46 ILSHPKIKLKEQHV 5
I+ PKIKLK+QH+
Sbjct: 1167 IVQTPKIKLKQQHI 1180
>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
gi|557526635|gb|ESR37941.1| hypothetical protein
CICLE_v10027681mg [Citrus clementina]
Length = 1397
Score = 72.4 bits (176), Expect = 6e-11
Identities = 36/74 (48%), Positives = 53/74 (71%)
Frame = -3
Query: 226 ENVFSARIVKSKIEKTTLGEVATAIKVVLKPGQQCISIKLDMDLIEALHMGISAESVRHS 47
+N +AR+VK +IEKT LG+VA +IK+V+ I I LDM+ I+ H+ I+A+ V+ S
Sbjct: 1100 DNENAARVVKGRIEKTLLGQVAKSIKIVMTSRLASIVIALDMETIQDAHLCINADIVKES 1159
Query: 46 ILSHPKIKLKEQHV 5
I+ PKIKLK+QH+
Sbjct: 1160 IVQTPKIKLKQQHI 1173
>gb|EMS65535.1| DNA-directed RNA polymerase III subunit RPC1 [Triticum urartu]
Length = 689
Score = 72.0 bits (175), Expect = 8e-11
Identities = 39/75 (52%), Positives = 55/75 (73%)
Frame = -3
Query: 229 EENVFSARIVKSKIEKTTLGEVATAIKVVLKPGQQCISIKLDMDLIEALHMGISAESVRH 50
++ +F+A+ VK IEK LGEVA AIK+VLK Q + ++LDM E +MGIS+++V+
Sbjct: 399 QDELFAAK-VKRSIEKVVLGEVAAAIKIVLKSNQPYLVVELDMQRTEG-YMGISSDTVQF 456
Query: 49 SILSHPKIKLKEQHV 5
SIL+ PKIKLK +HV
Sbjct: 457 SILNDPKIKLKSEHV 471
>ref|XP_001416093.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576317|gb|ABO94385.1| predicted protein
[Ostreococcus lucimarinus CCE9901]
Length = 1395
Score = 72.0 bits (175), Expect = 8e-11
Identities = 32/76 (42%), Positives = 53/76 (69%)
Frame = -3
Query: 232 NEENVFSARIVKSKIEKTTLGEVATAIKVVLKPGQQCISIKLDMDLIEALHMGISAESVR 53
++ +V +AR+VK ++EKTTLGE+ + I +V++P + + LDM+ I L + ++ SVR
Sbjct: 1100 SDRDVKAARVVKGRVEKTTLGEICSEINIVVRPHDLYLELMLDMEAINQLQLDVTIHSVR 1159
Query: 52 HSILSHPKIKLKEQHV 5
++L PK+KLK QHV
Sbjct: 1160 LAVLGAPKLKLKPQHV 1175
>ref|XP_002502032.1| predicted protein [Micromonas sp. RCC299] gi|226517297|gb|ACO63290.1|
predicted protein [Micromonas sp. RCC299]
Length = 1479
Score = 71.6 bits (174), Expect = 1e-10
Identities = 35/75 (46%), Positives = 51/75 (68%)
Frame = -3
Query: 229 EENVFSARIVKSKIEKTTLGEVATAIKVVLKPGQQCISIKLDMDLIEALHMGISAESVRH 50
++NV +AR+VK ++EKTTLGEV I VV P + + LD +I AL + ++ ESVRH
Sbjct: 1101 DDNVKAARVVKGRVEKTTLGEVCKFIDVVYNPSACYVEVCLDPAVISALQLDVTVESVRH 1160
Query: 49 SILSHPKIKLKEQHV 5
S+++ PK+KLK V
Sbjct: 1161 SLITAPKLKLKANTV 1175
>gb|ETP40691.1| hypothetical protein F442_12013, partial [Phytophthora parasitica
P10297]
Length = 1552
Score = 71.2 bits (173), Expect = 1e-10
Identities = 41/77 (53%), Positives = 52/77 (67%), Gaps = 7/77 (9%)
Frame = -3
Query: 214 SARIVKSKIEKTTLGEVATAIKVVLKPGQQCISIKLDMDLIEALHMGISAESVRHSILSH 35
SARIVK +IEKTTLGE+A IK V Q +S+KLD++ IE LH+ I+A SVR+SIL+
Sbjct: 1249 SARIVKGRIEKTTLGEIAVHIKEVFARDQAYLSVKLDLNAIEQLHLNITARSVRNSILNA 1308
Query: 34 PKI-------KLKEQHV 5
+ LKEQHV
Sbjct: 1309 VGVGPRGVLRLLKEQHV 1325
>gb|ETI42839.1| hypothetical protein F443_12095, partial [Phytophthora parasitica
P1569] gi|568045609|gb|ETM42752.1| hypothetical protein
L914_11645, partial [Phytophthora parasitica]
Length = 1552
Score = 71.2 bits (173), Expect = 1e-10
Identities = 41/77 (53%), Positives = 52/77 (67%), Gaps = 7/77 (9%)
Frame = -3
Query: 214 SARIVKSKIEKTTLGEVATAIKVVLKPGQQCISIKLDMDLIEALHMGISAESVRHSILSH 35
SARIVK +IEKTTLGE+A IK V Q +S+KLD++ IE LH+ I+A SVR+SIL+
Sbjct: 1249 SARIVKGRIEKTTLGEIAVHIKEVFARDQAYLSVKLDLNAIEQLHLNITARSVRNSILNA 1308
Query: 34 PKI-------KLKEQHV 5
+ LKEQHV
Sbjct: 1309 VGVGPRGVLRLLKEQHV 1325