BLASTX nr result

ID: Zingiber23_contig00035898 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00035898
         (238 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006663383.1| PREDICTED: F-box/LRR-repeat protein 20-like ...    59   7e-07
gb|EAY72305.1| hypothetical protein OsI_00160 [Oryza sativa Indi...    57   3e-06
gb|EMS54253.1| hypothetical protein TRIUR3_30611 [Triticum urartu]     55   1e-05

>ref|XP_006663383.1| PREDICTED: F-box/LRR-repeat protein 20-like [Oryza brachyantha]
          Length = 488

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 27/34 (79%), Positives = 31/34 (91%)
 Frame = +1

Query: 1   LLAADRCRDLTSLLLYDGGSRDALHHFIQRRGAA 102
           LLAADRCR+L SLL+YDGGSR+ALH FI +RGAA
Sbjct: 254 LLAADRCRELKSLLVYDGGSREALHRFIHQRGAA 287


>gb|EAY72305.1| hypothetical protein OsI_00160 [Oryza sativa Indica Group]
           gi|125587124|gb|EAZ27788.1| hypothetical protein
           OsJ_11732 [Oryza sativa Japonica Group]
          Length = 489

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/34 (79%), Positives = 30/34 (88%)
 Frame = +1

Query: 1   LLAADRCRDLTSLLLYDGGSRDALHHFIQRRGAA 102
           LLAADRCR L SLL+YDGGSR+ALH FI +RGAA
Sbjct: 253 LLAADRCRVLKSLLVYDGGSREALHRFIHQRGAA 286


>gb|EMS54253.1| hypothetical protein TRIUR3_30611 [Triticum urartu]
          Length = 313

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/61 (49%), Positives = 35/61 (57%)
 Frame = +1

Query: 1   LLAADRCRDLTSLLLYDGGSRDALHHFIQRRGAAXXXXXXXXXXXXXXXXXFAIAVENGY 180
           L+AADRC  L SLL+YDGGSR+AL  FI+RRGAA                  AI  E GY
Sbjct: 79  LIAADRCCALKSLLVYDGGSREALLQFIRRRGAALHTLDLRLPLDLHNDHLLAIGAEQGY 138

Query: 181 N 183
           +
Sbjct: 139 D 139


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