BLASTX nr result
ID: Zingiber23_contig00035612
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00035612
(552 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMS54797.1| E3 ubiquitin-protein ligase RFWD3 [Triticum urartu] 81 2e-13
gb|AAK20059.1|AC025783_19 hypothetical protein [Oryza sativa Jap... 79 6e-13
gb|EAY79407.1| hypothetical protein OsI_34535 [Oryza sativa Indi... 79 6e-13
ref|XP_004986047.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3... 79 1e-12
ref|XP_006662568.1| PREDICTED: uncharacterized protein LOC102709... 78 1e-12
ref|NP_001132877.1| uncharacterized LOC100194370 [Zea mays] gi|1... 78 1e-12
ref|XP_003572036.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3... 77 2e-12
ref|XP_002468675.1| hypothetical protein SORBIDRAFT_01g050085 [S... 76 5e-12
gb|AAN62783.1| Hypothetical protein [Oryza sativa Japonica Group... 75 1e-11
dbj|BAK06261.1| predicted protein [Hordeum vulgare subsp. vulgare] 75 1e-11
ref|XP_002468678.1| hypothetical protein SORBIDRAFT_01g050097 [S... 75 1e-11
gb|ACR35629.1| unknown [Zea mays] gi|414864294|tpg|DAA42851.1| T... 75 1e-11
gb|EAZ25299.1| hypothetical protein OsJ_09109 [Oryza sativa Japo... 75 1e-11
ref|XP_004983769.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3... 74 2e-11
gb|ABA95404.1| transposon protein, putative, unclassified [Oryza... 72 9e-11
gb|EEE58178.1| hypothetical protein OsJ_09108 [Oryza sativa Japo... 72 1e-10
gb|EMT16008.1| hypothetical protein F775_23901 [Aegilops tauschii] 71 2e-10
ref|XP_006649243.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3... 71 2e-10
gb|EXB31658.1| E3 ubiquitin-protein ligase RFWD3 [Morus notabilis] 70 3e-10
ref|XP_002468674.1| hypothetical protein SORBIDRAFT_01g050080 [S... 70 4e-10
>gb|EMS54797.1| E3 ubiquitin-protein ligase RFWD3 [Triticum urartu]
Length = 551
Score = 80.9 bits (198), Expect = 2e-13
Identities = 31/45 (68%), Positives = 36/45 (80%)
Frame = -2
Query: 140 ELDASSSPNCPVCFEPWKGEGLHRVCCVPCGHVYGRSCLERWLKQ 6
E A+++P CPVC EPW EG HR+ C+PCGHVYGRSCLERWL Q
Sbjct: 95 ERAATNAPTCPVCMEPWTSEGDHRISCIPCGHVYGRSCLERWLTQ 139
>gb|AAK20059.1|AC025783_19 hypothetical protein [Oryza sativa Japonica Group]
gi|31433364|gb|AAP54883.1| Zinc finger, C3HC4 type
family protein, expressed [Oryza sativa Japonica Group]
Length = 499
Score = 79.3 bits (194), Expect = 6e-13
Identities = 29/46 (63%), Positives = 34/46 (73%)
Frame = -2
Query: 140 ELDASSSPNCPVCFEPWKGEGLHRVCCVPCGHVYGRSCLERWLKQC 3
E ++ S P CP+C W +G HRV C+PCGHVYGRSCLERWL QC
Sbjct: 88 EAESQSLPGCPICMNAWTADGAHRVSCIPCGHVYGRSCLERWLLQC 133
>gb|EAY79407.1| hypothetical protein OsI_34535 [Oryza sativa Indica Group]
Length = 521
Score = 79.3 bits (194), Expect = 6e-13
Identities = 29/46 (63%), Positives = 34/46 (73%)
Frame = -2
Query: 140 ELDASSSPNCPVCFEPWKGEGLHRVCCVPCGHVYGRSCLERWLKQC 3
E ++ S P CP+C W +G HRV C+PCGHVYGRSCLERWL QC
Sbjct: 87 EAESQSLPGCPICMNAWTADGAHRVSCIPCGHVYGRSCLERWLLQC 132
>ref|XP_004986047.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like [Setaria italica]
Length = 592
Score = 78.6 bits (192), Expect = 1e-12
Identities = 28/43 (65%), Positives = 35/43 (81%)
Frame = -2
Query: 134 DASSSPNCPVCFEPWKGEGLHRVCCVPCGHVYGRSCLERWLKQ 6
+ +++P CPVC EPW +G HR+ C+PCGHVYGRSCLERWL Q
Sbjct: 101 ERATTPTCPVCMEPWASQGPHRISCIPCGHVYGRSCLERWLTQ 143
>ref|XP_006662568.1| PREDICTED: uncharacterized protein LOC102709115 [Oryza brachyantha]
Length = 614
Score = 78.2 bits (191), Expect = 1e-12
Identities = 28/46 (60%), Positives = 34/46 (73%)
Frame = -2
Query: 140 ELDASSSPNCPVCFEPWKGEGLHRVCCVPCGHVYGRSCLERWLKQC 3
E ++ P CP+C W +G+HRV C+PCGHVYGRSCLERWL QC
Sbjct: 206 EAESQCLPGCPICMSAWTADGVHRVSCIPCGHVYGRSCLERWLLQC 251
>ref|NP_001132877.1| uncharacterized LOC100194370 [Zea mays] gi|194695640|gb|ACF81904.1|
unknown [Zea mays] gi|414864295|tpg|DAA42852.1| TPA:
putative RING zinc finger domain superfamily protein
[Zea mays]
Length = 594
Score = 78.2 bits (191), Expect = 1e-12
Identities = 45/154 (29%), Positives = 67/154 (43%)
Frame = -2
Query: 467 MEVEEAAGESSIARNIDLGEDEPLLHDSGVEDRVARQEVDSRAFSEVTEDARERMHDGER 288
MEVE+ +I + D +D+P D G + QE+D + ED +
Sbjct: 1 MEVEDLEDLYNIDASYD--QDDPD-EDEGEQQSEDDQEMDMLGGAVAEEDGADDARGS-- 55
Query: 287 EVISLGESDGEDDADGQSXXXXXXXXXXXXXXXXXXXXXXESLGKTETVELDASSSPNCP 108
S E + E+D + + ++ + + NCP
Sbjct: 56 ---SADEEEDEEDDEEEEEEEPEGARLVAGDCGPSPRARVSEFAAAAGAAVERAHTANCP 112
Query: 107 VCFEPWKGEGLHRVCCVPCGHVYGRSCLERWLKQ 6
VC +PW +G HR+ C+PCGHVYGRSCLE+WL Q
Sbjct: 113 VCMDPWTSQGPHRISCIPCGHVYGRSCLEKWLTQ 146
>ref|XP_003572036.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like [Brachypodium
distachyon]
Length = 560
Score = 77.4 bits (189), Expect = 2e-12
Identities = 29/46 (63%), Positives = 33/46 (71%)
Frame = -2
Query: 140 ELDASSSPNCPVCFEPWKGEGLHRVCCVPCGHVYGRSCLERWLKQC 3
E + P+CPVC W +G HRV C+PCGHVYGRSCLERWL QC
Sbjct: 60 EAEGPCVPSCPVCMNAWTADGKHRVSCIPCGHVYGRSCLERWLTQC 105
>ref|XP_002468675.1| hypothetical protein SORBIDRAFT_01g050085 [Sorghum bicolor]
gi|241922529|gb|EER95673.1| hypothetical protein
SORBIDRAFT_01g050085 [Sorghum bicolor]
Length = 139
Score = 76.3 bits (186), Expect = 5e-12
Identities = 28/43 (65%), Positives = 34/43 (79%)
Frame = -2
Query: 140 ELDASSSPNCPVCFEPWKGEGLHRVCCVPCGHVYGRSCLERWL 12
E +A + P C VC EPW +G HR+CC+PCGHVYGRSCLE+WL
Sbjct: 71 EHNAEAWPTCCVCMEPWTPDGAHRICCIPCGHVYGRSCLEKWL 113
>gb|AAN62783.1| Hypothetical protein [Oryza sativa Japonica Group]
gi|108705767|gb|ABF93562.1| Zinc finger, C3HC4 type
family protein [Oryza sativa Japonica Group]
gi|218191933|gb|EEC74360.1| hypothetical protein
OsI_09670 [Oryza sativa Indica Group]
Length = 557
Score = 75.1 bits (183), Expect = 1e-11
Identities = 26/41 (63%), Positives = 32/41 (78%)
Frame = -2
Query: 131 ASSSPNCPVCFEPWKGEGLHRVCCVPCGHVYGRSCLERWLK 9
A+ CPVC E W +G HR+CC+PCGH+YGRSCLERWL+
Sbjct: 83 AAEKNACPVCMEAWASQGAHRICCIPCGHIYGRSCLERWLR 123
>dbj|BAK06261.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 192
Score = 75.1 bits (183), Expect = 1e-11
Identities = 52/168 (30%), Positives = 70/168 (41%), Gaps = 4/168 (2%)
Frame = -2
Query: 494 EGEQLT*HQMEVEEAAGESSIARNIDLGEDEPLLHD--SGVEDRVARQEVDSRAFSEVTE 321
+GE L E + A + GEDE + D S + + + DS E
Sbjct: 3 DGEVLPRQAAEALFRGAANRAAPGLAGGEDEEIYDDDRSSDDSDYSYDDDDSGESGWYYE 62
Query: 320 DARERMHDGEREVISLGESDGEDDADGQSXXXXXXXXXXXXXXXXXXXXXXESLGKTETV 141
D E + E++ E G D A G + S G
Sbjct: 63 DQEEEGEEEEQQ-----EGAGGDRACGSAEEEAA------------------SAGVGGGA 99
Query: 140 ELDAS--SSPNCPVCFEPWKGEGLHRVCCVPCGHVYGRSCLERWLKQC 3
E D S ++ C +C +PW G HR+CC+PCGHVYGRSCLERWL +C
Sbjct: 100 EADESPRAAATCCICMDPWDSYGAHRICCIPCGHVYGRSCLERWLLRC 147
>ref|XP_002468678.1| hypothetical protein SORBIDRAFT_01g050097 [Sorghum bicolor]
gi|241922532|gb|EER95676.1| hypothetical protein
SORBIDRAFT_01g050097 [Sorghum bicolor]
Length = 117
Score = 75.1 bits (183), Expect = 1e-11
Identities = 27/43 (62%), Positives = 30/43 (69%)
Frame = -2
Query: 134 DASSSPNCPVCFEPWKGEGLHRVCCVPCGHVYGRSCLERWLKQ 6
D P C VC EPW G HR+CC+PCGHVYGRSCLE WL +
Sbjct: 40 DVGGRPTCCVCMEPWTDSGAHRICCIPCGHVYGRSCLESWLSR 82
>gb|ACR35629.1| unknown [Zea mays] gi|414864294|tpg|DAA42851.1| TPA: putative RING
zinc finger domain superfamily protein [Zea mays]
Length = 566
Score = 75.1 bits (183), Expect = 1e-11
Identities = 26/44 (59%), Positives = 35/44 (79%)
Frame = -2
Query: 137 LDASSSPNCPVCFEPWKGEGLHRVCCVPCGHVYGRSCLERWLKQ 6
++ + + NCPVC +PW +G HR+ C+PCGHVYGRSCLE+WL Q
Sbjct: 75 VERAHTANCPVCMDPWTSQGPHRISCIPCGHVYGRSCLEKWLTQ 118
>gb|EAZ25299.1| hypothetical protein OsJ_09109 [Oryza sativa Japonica Group]
Length = 238
Score = 75.1 bits (183), Expect = 1e-11
Identities = 26/41 (63%), Positives = 32/41 (78%)
Frame = -2
Query: 131 ASSSPNCPVCFEPWKGEGLHRVCCVPCGHVYGRSCLERWLK 9
A+ CPVC E W +G HR+CC+PCGH+YGRSCLERWL+
Sbjct: 83 AAEKNACPVCMEAWASQGAHRICCIPCGHIYGRSCLERWLR 123
>ref|XP_004983769.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like [Setaria italica]
Length = 575
Score = 74.3 bits (181), Expect = 2e-11
Identities = 26/46 (56%), Positives = 34/46 (73%)
Frame = -2
Query: 140 ELDASSSPNCPVCFEPWKGEGLHRVCCVPCGHVYGRSCLERWLKQC 3
+ + + P+CP+C W +G HRV C+PCGHVYGR CLERWL+QC
Sbjct: 75 DAEGPNLPSCPICMIAWTADGAHRVSCIPCGHVYGRYCLERWLQQC 120
>gb|ABA95404.1| transposon protein, putative, unclassified [Oryza sativa Japonica
Group]
Length = 118
Score = 72.0 bits (175), Expect = 9e-11
Identities = 24/41 (58%), Positives = 32/41 (78%)
Frame = -2
Query: 134 DASSSPNCPVCFEPWKGEGLHRVCCVPCGHVYGRSCLERWL 12
+ + +P C +C +PW G HR+CC+PCGHVYGRSCLE+WL
Sbjct: 33 EEAPAPTCSICLQPWTCNGDHRICCIPCGHVYGRSCLEKWL 73
>gb|EEE58178.1| hypothetical protein OsJ_09108 [Oryza sativa Japonica Group]
Length = 216
Score = 71.6 bits (174), Expect = 1e-10
Identities = 24/37 (64%), Positives = 30/37 (81%)
Frame = -2
Query: 122 SPNCPVCFEPWKGEGLHRVCCVPCGHVYGRSCLERWL 12
+P C +C +PW G HR+CC+PCGHVYGRSCLE+WL
Sbjct: 56 APTCSICLQPWTCNGDHRICCIPCGHVYGRSCLEKWL 92
>gb|EMT16008.1| hypothetical protein F775_23901 [Aegilops tauschii]
Length = 475
Score = 71.2 bits (173), Expect = 2e-10
Identities = 26/47 (55%), Positives = 31/47 (65%)
Frame = -2
Query: 149 ETVELDASSSPNCPVCFEPWKGEGLHRVCCVPCGHVYGRSCLERWLK 9
E VE + P C +C EPW G H +CC+PCGHVYG SCL RW+K
Sbjct: 353 ECVESKQEAGPTCSICMEPWTSTGEHHICCIPCGHVYGWSCLIRWVK 399
>ref|XP_006649243.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like isoform X1 [Oryza
brachyantha]
Length = 557
Score = 70.9 bits (172), Expect = 2e-10
Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Frame = -2
Query: 311 ERMHDGEREVISLGESDGEDDADGQSXXXXXXXXXXXXXXXXXXXXXXESLGKTETVELD 132
+ +H+G + + SD +D+ + + E G +E +
Sbjct: 20 QELHEGIDFDVQVDYSDDDDEEEEEEGEESDEDEEEEGQGEPGEESIGEGCGPSEQARVP 79
Query: 131 --ASSSPNCPVCFEPWKGEGLHRVCCV-PCGHVYGRSCLERWL 12
A+ CPVC E W +G HR+CC+ PCGHVYGRSCLE+WL
Sbjct: 80 GGAAEKHTCPVCMEAWTSQGAHRICCINPCGHVYGRSCLEKWL 122
>gb|EXB31658.1| E3 ubiquitin-protein ligase RFWD3 [Morus notabilis]
Length = 424
Score = 70.1 bits (170), Expect = 3e-10
Identities = 41/142 (28%), Positives = 65/142 (45%)
Frame = -2
Query: 428 RNIDLGEDEPLLHDSGVEDRVARQEVDSRAFSEVTEDARERMHDGEREVISLGESDGEDD 249
+N +L E P+ D+ VE+ +E D ED + + E ++I E D E+D
Sbjct: 15 QNEELNEAAPISLDNEVENEDDEEEED--------EDDEDEEYMSEDDLID--ELDSEED 64
Query: 248 ADGQSXXXXXXXXXXXXXXXXXXXXXXESLGKTETVELDASSSPNCPVCFEPWKGEGLHR 69
A+ E + E+D CP+C EPW +G H
Sbjct: 65 AEEDEEDEEEEEGEGEGEACFLGDEGSEG-NQWSASEIDGLF---CPICMEPWTNDGDHH 120
Query: 68 VCCVPCGHVYGRSCLERWLKQC 3
+CC+ CGH++G SC+++WLK+C
Sbjct: 121 ICCLSCGHIFGISCIQKWLKKC 142
>ref|XP_002468674.1| hypothetical protein SORBIDRAFT_01g050080 [Sorghum bicolor]
gi|241922528|gb|EER95672.1| hypothetical protein
SORBIDRAFT_01g050080 [Sorghum bicolor]
Length = 611
Score = 69.7 bits (169), Expect = 4e-10
Identities = 24/44 (54%), Positives = 34/44 (77%)
Frame = -2
Query: 137 LDASSSPNCPVCFEPWKGEGLHRVCCVPCGHVYGRSCLERWLKQ 6
++ +++ CPVC + W +G HR+ C+PCGHVYGRSCLE+WL Q
Sbjct: 118 VERANTSTCPVCMDLWTSQGPHRISCIPCGHVYGRSCLEKWLTQ 161